Multiple sequence alignment - TraesCS7A01G317500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G317500 chr7A 100.000 4154 0 0 1 4154 457682089 457686242 0.000000e+00 7672.0
1 TraesCS7A01G317500 chr7A 89.474 209 18 4 3867 4073 322406835 322406629 1.150000e-65 261.0
2 TraesCS7A01G317500 chr7A 83.212 274 31 11 3 273 320978736 320978997 1.930000e-58 237.0
3 TraesCS7A01G317500 chr7D 93.229 3781 134 32 1 3711 399831944 399835672 0.000000e+00 5452.0
4 TraesCS7A01G317500 chr7D 81.162 1067 195 6 2039 3102 400184826 400183763 0.000000e+00 852.0
5 TraesCS7A01G317500 chr7D 80.615 1073 186 17 2044 3102 193935685 193936749 0.000000e+00 809.0
6 TraesCS7A01G317500 chr7D 87.156 654 83 1 1029 1681 400185879 400185226 0.000000e+00 741.0
7 TraesCS7A01G317500 chr7D 89.394 66 7 0 4086 4151 586833302 586833367 2.660000e-12 84.2
8 TraesCS7A01G317500 chr7B 93.468 3016 113 30 522 3508 409219398 409222358 0.000000e+00 4401.0
9 TraesCS7A01G317500 chr7B 81.929 1068 187 6 2039 3103 409749079 409748015 0.000000e+00 898.0
10 TraesCS7A01G317500 chr7B 88.532 654 74 1 1029 1681 409750121 409749468 0.000000e+00 791.0
11 TraesCS7A01G317500 chr7B 79.963 1073 191 20 2045 3102 157688458 157689521 0.000000e+00 769.0
12 TraesCS7A01G317500 chr7B 84.211 380 43 13 3 374 276740942 276740572 1.840000e-93 353.0
13 TraesCS7A01G317500 chr7B 93.401 197 10 3 3507 3700 409222519 409222715 5.250000e-74 289.0
14 TraesCS7A01G317500 chr1D 84.372 1235 169 12 2039 3270 416681 417894 0.000000e+00 1190.0
15 TraesCS7A01G317500 chr1D 91.193 704 60 2 999 1701 415434 416136 0.000000e+00 955.0
16 TraesCS7A01G317500 chr1D 79.586 1063 189 18 2061 3102 80843133 80844188 0.000000e+00 736.0
17 TraesCS7A01G317500 chr1D 93.617 94 5 1 3715 3807 449287094 449287001 5.600000e-29 139.0
18 TraesCS7A01G317500 chr1A 80.579 1071 191 13 2045 3102 99319309 99320375 0.000000e+00 809.0
19 TraesCS7A01G317500 chr1A 95.082 61 3 0 4092 4152 559048097 559048037 3.420000e-16 97.1
20 TraesCS7A01G317500 chrUn 87.752 645 75 2 1036 1676 100315273 100314629 0.000000e+00 750.0
21 TraesCS7A01G317500 chrUn 76.542 1070 239 11 2040 3103 350361763 350360700 3.600000e-160 575.0
22 TraesCS7A01G317500 chrUn 83.550 231 19 15 3851 4070 92435986 92436208 9.110000e-47 198.0
23 TraesCS7A01G317500 chr4D 86.728 648 83 2 1029 1673 503920953 503920306 0.000000e+00 717.0
24 TraesCS7A01G317500 chr4D 86.357 645 84 2 1036 1676 491004033 491003389 0.000000e+00 701.0
25 TraesCS7A01G317500 chr4D 76.449 1070 240 11 2040 3103 503919920 503918857 1.680000e-158 569.0
26 TraesCS7A01G317500 chr4D 94.561 239 13 0 3835 4073 199811144 199810906 1.820000e-98 370.0
27 TraesCS7A01G317500 chr4D 82.927 246 25 10 3835 4069 175616727 175616966 5.440000e-49 206.0
28 TraesCS7A01G317500 chr4B 86.781 643 85 0 1029 1671 667572881 667572239 0.000000e+00 717.0
29 TraesCS7A01G317500 chr5A 75.910 1071 241 14 2040 3103 688613327 688612267 2.200000e-147 532.0
30 TraesCS7A01G317500 chr2A 96.694 242 7 1 3833 4073 478666205 478666446 6.470000e-108 401.0
31 TraesCS7A01G317500 chr2A 96.667 240 7 1 3835 4073 478672357 478672596 8.370000e-107 398.0
32 TraesCS7A01G317500 chr3A 96.653 239 8 0 3835 4073 68250953 68250715 8.370000e-107 398.0
33 TraesCS7A01G317500 chr3A 89.960 249 24 1 3835 4082 233899201 233898953 1.860000e-83 320.0
34 TraesCS7A01G317500 chr3B 81.308 428 55 17 3 421 738918817 738918406 1.440000e-84 324.0
35 TraesCS7A01G317500 chr1B 77.757 535 61 31 1 497 357536286 357536800 4.090000e-70 276.0
36 TraesCS7A01G317500 chr2B 82.164 342 33 17 2 339 639500372 639500055 6.850000e-68 268.0
37 TraesCS7A01G317500 chr2B 82.791 215 24 11 2 212 172789685 172789480 3.300000e-41 180.0
38 TraesCS7A01G317500 chr3D 86.878 221 25 4 3855 4073 40264686 40264468 1.150000e-60 244.0
39 TraesCS7A01G317500 chr2D 83.039 283 32 11 2 282 537332410 537332142 4.150000e-60 243.0
40 TraesCS7A01G317500 chr5D 84.746 177 17 10 1 174 370009841 370009672 7.140000e-38 169.0
41 TraesCS7A01G317500 chr5D 91.000 100 5 2 3710 3808 453421778 453421682 9.370000e-27 132.0
42 TraesCS7A01G317500 chr5B 94.624 93 5 0 3715 3807 339921340 339921432 1.200000e-30 145.0
43 TraesCS7A01G317500 chr6B 92.405 79 6 0 4074 4152 616327311 616327389 3.390000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G317500 chr7A 457682089 457686242 4153 False 7672.0 7672 100.0000 1 4154 1 chr7A.!!$F2 4153
1 TraesCS7A01G317500 chr7D 399831944 399835672 3728 False 5452.0 5452 93.2290 1 3711 1 chr7D.!!$F2 3710
2 TraesCS7A01G317500 chr7D 193935685 193936749 1064 False 809.0 809 80.6150 2044 3102 1 chr7D.!!$F1 1058
3 TraesCS7A01G317500 chr7D 400183763 400185879 2116 True 796.5 852 84.1590 1029 3102 2 chr7D.!!$R1 2073
4 TraesCS7A01G317500 chr7B 409219398 409222715 3317 False 2345.0 4401 93.4345 522 3700 2 chr7B.!!$F2 3178
5 TraesCS7A01G317500 chr7B 409748015 409750121 2106 True 844.5 898 85.2305 1029 3103 2 chr7B.!!$R2 2074
6 TraesCS7A01G317500 chr7B 157688458 157689521 1063 False 769.0 769 79.9630 2045 3102 1 chr7B.!!$F1 1057
7 TraesCS7A01G317500 chr1D 415434 417894 2460 False 1072.5 1190 87.7825 999 3270 2 chr1D.!!$F2 2271
8 TraesCS7A01G317500 chr1D 80843133 80844188 1055 False 736.0 736 79.5860 2061 3102 1 chr1D.!!$F1 1041
9 TraesCS7A01G317500 chr1A 99319309 99320375 1066 False 809.0 809 80.5790 2045 3102 1 chr1A.!!$F1 1057
10 TraesCS7A01G317500 chrUn 100314629 100315273 644 True 750.0 750 87.7520 1036 1676 1 chrUn.!!$R1 640
11 TraesCS7A01G317500 chrUn 350360700 350361763 1063 True 575.0 575 76.5420 2040 3103 1 chrUn.!!$R2 1063
12 TraesCS7A01G317500 chr4D 491003389 491004033 644 True 701.0 701 86.3570 1036 1676 1 chr4D.!!$R2 640
13 TraesCS7A01G317500 chr4D 503918857 503920953 2096 True 643.0 717 81.5885 1029 3103 2 chr4D.!!$R3 2074
14 TraesCS7A01G317500 chr4B 667572239 667572881 642 True 717.0 717 86.7810 1029 1671 1 chr4B.!!$R1 642
15 TraesCS7A01G317500 chr5A 688612267 688613327 1060 True 532.0 532 75.9100 2040 3103 1 chr5A.!!$R1 1063
16 TraesCS7A01G317500 chr1B 357536286 357536800 514 False 276.0 276 77.7570 1 497 1 chr1B.!!$F1 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
663 729 0.036765 TAGAAACACAGCCGGCGAAT 60.037 50.0 23.20 7.68 0.00 3.34 F
934 1013 0.108186 AGTCATTCGCTCGCATTCCA 60.108 50.0 0.00 0.00 0.00 3.53 F
935 1014 0.940126 GTCATTCGCTCGCATTCCAT 59.060 50.0 0.00 0.00 0.00 3.41 F
1958 2443 1.091771 CCAGCACGAGCAAGGTATGG 61.092 60.0 7.77 0.59 45.49 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1936 2421 0.320421 TACCTTGCTCGTGCTGGTTC 60.320 55.000 24.24 0.0 42.80 3.62 R
1958 2443 3.385755 TCCCGAACCCATAAACTAGCTAC 59.614 47.826 0.00 0.0 0.00 3.58 R
2142 2947 3.973516 TCGCCGAACTCGTGCAGT 61.974 61.111 11.35 0.0 36.04 4.40 R
3831 4826 0.031817 CCCAATTCCATCCCCTGCTT 60.032 55.000 0.00 0.0 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
184 187 7.824779 GGGAAACTCTCAAGATTATACAACAGT 59.175 37.037 0.00 0.00 0.00 3.55
339 380 3.509575 GCAAAGTGATGTATTCAACCCCA 59.490 43.478 0.00 0.00 35.70 4.96
353 394 1.149101 ACCCCAAACAGTCATGTCCT 58.851 50.000 0.00 0.00 39.29 3.85
379 420 3.070878 TCTCTCTATTGCCAACACACACA 59.929 43.478 0.00 0.00 0.00 3.72
380 421 3.138304 TCTCTATTGCCAACACACACAC 58.862 45.455 0.00 0.00 0.00 3.82
381 422 2.877786 CTCTATTGCCAACACACACACA 59.122 45.455 0.00 0.00 0.00 3.72
382 423 2.616376 TCTATTGCCAACACACACACAC 59.384 45.455 0.00 0.00 0.00 3.82
383 424 1.180907 ATTGCCAACACACACACACA 58.819 45.000 0.00 0.00 0.00 3.72
384 425 0.242286 TTGCCAACACACACACACAC 59.758 50.000 0.00 0.00 0.00 3.82
401 442 0.987294 CACCTGTTCTGGAGGGATGT 59.013 55.000 2.86 0.00 34.56 3.06
404 445 1.912043 CCTGTTCTGGAGGGATGTCTT 59.088 52.381 0.00 0.00 0.00 3.01
421 462 2.952310 GTCTTTGAACAGGCACCTCTTT 59.048 45.455 0.00 0.00 0.00 2.52
497 553 8.029642 TCTTCATTTCAATCTCGTTTTACTCC 57.970 34.615 0.00 0.00 0.00 3.85
516 572 5.681639 ACTCCAGGAAAGAATATAAACGGG 58.318 41.667 0.00 0.00 0.00 5.28
517 573 5.191124 ACTCCAGGAAAGAATATAAACGGGT 59.809 40.000 0.00 0.00 0.00 5.28
565 624 1.824852 CTTTCGCCAAAAGCCCCTATT 59.175 47.619 0.00 0.00 38.11 1.73
580 639 6.838382 AGCCCCTATTAGAACGTTCAATTAT 58.162 36.000 28.78 17.29 0.00 1.28
581 640 7.970102 AGCCCCTATTAGAACGTTCAATTATA 58.030 34.615 28.78 17.46 0.00 0.98
588 647 8.658499 ATTAGAACGTTCAATTATAGTGACCC 57.342 34.615 28.78 0.00 0.00 4.46
646 705 5.335949 CGCGCGTGGACATAATTAATTTTAG 59.664 40.000 24.19 0.00 0.00 1.85
663 729 0.036765 TAGAAACACAGCCGGCGAAT 60.037 50.000 23.20 7.68 0.00 3.34
715 781 6.610741 ACACTCACTTGAGAAGAACAAATC 57.389 37.500 13.27 0.00 44.74 2.17
723 789 4.847633 TGAGAAGAACAAATCGTGCAAAG 58.152 39.130 0.00 0.00 0.00 2.77
775 854 1.369091 GGTCCATTCGACGCTGCATT 61.369 55.000 0.00 0.00 42.99 3.56
778 857 1.584483 CATTCGACGCTGCATTGGC 60.584 57.895 0.00 0.00 41.68 4.52
781 860 1.083806 TTCGACGCTGCATTGGCTAG 61.084 55.000 0.00 0.00 41.91 3.42
789 868 0.739462 TGCATTGGCTAGGACGTTCG 60.739 55.000 0.00 0.00 41.91 3.95
811 890 0.798776 GATGGCACGACAAGGACTTG 59.201 55.000 10.34 10.34 45.58 3.16
934 1013 0.108186 AGTCATTCGCTCGCATTCCA 60.108 50.000 0.00 0.00 0.00 3.53
935 1014 0.940126 GTCATTCGCTCGCATTCCAT 59.060 50.000 0.00 0.00 0.00 3.41
947 1026 5.163854 GCTCGCATTCCATATAACACATACC 60.164 44.000 0.00 0.00 0.00 2.73
963 1042 3.181469 ACATACCCTACACATTAGCGGTG 60.181 47.826 0.00 0.00 41.95 4.94
985 1064 2.248487 GTGTTACAAGGTCGACTAGCG 58.752 52.381 16.46 4.48 42.69 4.26
1745 1841 3.989817 GCATGCTTGTTTCGGATTCTTTT 59.010 39.130 11.37 0.00 0.00 2.27
1899 2233 9.969001 AAATTTGGATTAGTAGGCTAACAACTA 57.031 29.630 0.00 0.00 39.70 2.24
1936 2421 9.146984 TGGAATGAAAACTAAGTACGACTAATG 57.853 33.333 0.00 0.00 0.00 1.90
1958 2443 1.091771 CCAGCACGAGCAAGGTATGG 61.092 60.000 7.77 0.59 45.49 2.74
2115 2920 2.728383 CGCGACGACACGGACTTT 60.728 61.111 0.00 0.00 0.00 2.66
2271 3081 0.830648 TCGGCTTTCGATCCAATCCT 59.169 50.000 0.00 0.00 43.74 3.24
3141 3966 0.877071 ACGAAAGCGACGACCTTCTA 59.123 50.000 0.00 0.00 41.64 2.10
3144 3969 2.517935 GAAAGCGACGACCTTCTAGAC 58.482 52.381 0.00 0.00 0.00 2.59
3163 3988 1.710339 GAACAGTGATTCGAGGCGC 59.290 57.895 0.00 0.00 0.00 6.53
3208 4033 2.464459 GCGGCTGCGCATCTAAGTT 61.464 57.895 12.24 0.00 34.62 2.66
3273 4099 4.111375 TCGCTTCTTCCAGAGATTGTAC 57.889 45.455 0.00 0.00 33.49 2.90
3279 4105 3.444034 TCTTCCAGAGATTGTACCGTCTG 59.556 47.826 2.19 3.56 36.89 3.51
3295 4123 8.029642 GTACCGTCTGTACTTGTAGTAAGTTA 57.970 38.462 0.00 0.00 45.32 2.24
3296 4124 6.903419 ACCGTCTGTACTTGTAGTAAGTTAC 58.097 40.000 4.78 4.78 31.62 2.50
3297 4125 6.712547 ACCGTCTGTACTTGTAGTAAGTTACT 59.287 38.462 19.15 19.15 42.68 2.24
3298 4126 7.878127 ACCGTCTGTACTTGTAGTAAGTTACTA 59.122 37.037 17.12 17.12 40.14 1.82
3374 4202 7.863666 TGATTGGAAGCAATTGAAATTGAAAC 58.136 30.769 17.78 8.32 46.72 2.78
3406 4234 3.084786 GTTCTGATTGGAGGTTCCCTTG 58.915 50.000 0.00 0.00 35.03 3.61
3466 4294 3.197116 GCTACAGGTTAGACTTTAGGGCA 59.803 47.826 0.00 0.00 0.00 5.36
3468 4296 3.517612 ACAGGTTAGACTTTAGGGCAGA 58.482 45.455 0.00 0.00 0.00 4.26
3602 4597 6.105397 AGGGTAACTTGAACGATTCAGTAA 57.895 37.500 0.00 0.00 41.38 2.24
3621 4616 7.724287 TCAGTAATGAGATTGATCTTGGAGAG 58.276 38.462 0.00 0.00 37.25 3.20
3630 4625 7.688343 AGATTGATCTTGGAGAGAGAAAAAGT 58.312 34.615 0.00 0.00 37.93 2.66
3661 4656 3.056107 TGGTGTACCAGTCAGTCATTAGC 60.056 47.826 0.00 0.00 42.01 3.09
3677 4672 7.648908 CAGTCATTAGCATTTGAAAACAGTTCA 59.351 33.333 0.00 0.00 0.00 3.18
3683 4678 2.859526 TTGAAAACAGTTCATGCGCA 57.140 40.000 14.96 14.96 0.00 6.09
3701 4696 3.249917 CGCACAGGTTTTGTTCAAAAGT 58.750 40.909 10.40 3.94 38.16 2.66
3724 4719 7.163027 GTGAACGGAATCACTTTAGCTATAC 57.837 40.000 10.02 0.00 44.98 1.47
3725 4720 5.975344 TGAACGGAATCACTTTAGCTATACG 59.025 40.000 0.00 0.00 0.00 3.06
3726 4721 5.511234 ACGGAATCACTTTAGCTATACGT 57.489 39.130 0.00 0.00 0.00 3.57
3727 4722 5.517904 ACGGAATCACTTTAGCTATACGTC 58.482 41.667 0.00 0.00 0.00 4.34
3728 4723 5.066893 ACGGAATCACTTTAGCTATACGTCA 59.933 40.000 0.00 0.00 0.00 4.35
3729 4724 5.625721 CGGAATCACTTTAGCTATACGTCAG 59.374 44.000 0.00 0.00 0.00 3.51
3730 4725 6.505272 GGAATCACTTTAGCTATACGTCAGT 58.495 40.000 0.00 0.00 0.00 3.41
3731 4726 6.637658 GGAATCACTTTAGCTATACGTCAGTC 59.362 42.308 0.00 0.00 0.00 3.51
3732 4727 5.152923 TCACTTTAGCTATACGTCAGTCG 57.847 43.478 0.00 0.00 46.00 4.18
3733 4728 4.034858 TCACTTTAGCTATACGTCAGTCGG 59.965 45.833 0.00 0.00 44.69 4.79
3734 4729 3.243002 ACTTTAGCTATACGTCAGTCGGC 60.243 47.826 0.00 0.00 44.69 5.54
3735 4730 2.251409 TAGCTATACGTCAGTCGGCT 57.749 50.000 0.00 0.00 44.69 5.52
3736 4731 0.663688 AGCTATACGTCAGTCGGCTG 59.336 55.000 11.77 11.77 44.69 4.85
3747 4742 3.904136 CAGTCGGCTGAAAATTTCACT 57.096 42.857 12.86 0.00 45.28 3.41
3748 4743 4.228912 CAGTCGGCTGAAAATTTCACTT 57.771 40.909 12.86 0.00 45.28 3.16
3749 4744 4.610945 CAGTCGGCTGAAAATTTCACTTT 58.389 39.130 12.86 0.00 45.28 2.66
3750 4745 4.442073 CAGTCGGCTGAAAATTTCACTTTG 59.558 41.667 12.86 0.00 45.28 2.77
3751 4746 3.735746 GTCGGCTGAAAATTTCACTTTGG 59.264 43.478 4.03 0.00 35.46 3.28
3752 4747 3.059166 CGGCTGAAAATTTCACTTTGGG 58.941 45.455 4.03 0.00 35.46 4.12
3753 4748 3.492482 CGGCTGAAAATTTCACTTTGGGT 60.492 43.478 4.03 0.00 35.46 4.51
3754 4749 4.058124 GGCTGAAAATTTCACTTTGGGTC 58.942 43.478 4.03 0.00 35.46 4.46
3755 4750 4.442753 GGCTGAAAATTTCACTTTGGGTCA 60.443 41.667 4.03 0.00 35.46 4.02
3756 4751 4.746611 GCTGAAAATTTCACTTTGGGTCAG 59.253 41.667 4.03 6.43 35.46 3.51
3757 4752 5.682212 GCTGAAAATTTCACTTTGGGTCAGT 60.682 40.000 4.03 0.00 35.46 3.41
3758 4753 6.293004 TGAAAATTTCACTTTGGGTCAGTT 57.707 33.333 4.03 0.00 34.08 3.16
3759 4754 6.105333 TGAAAATTTCACTTTGGGTCAGTTG 58.895 36.000 4.03 0.00 34.08 3.16
3760 4755 5.930837 AAATTTCACTTTGGGTCAGTTGA 57.069 34.783 0.00 0.00 0.00 3.18
3761 4756 6.484364 AAATTTCACTTTGGGTCAGTTGAT 57.516 33.333 0.00 0.00 0.00 2.57
3762 4757 6.484364 AATTTCACTTTGGGTCAGTTGATT 57.516 33.333 0.00 0.00 0.00 2.57
3763 4758 5.930837 TTTCACTTTGGGTCAGTTGATTT 57.069 34.783 0.00 0.00 0.00 2.17
3764 4759 5.930837 TTCACTTTGGGTCAGTTGATTTT 57.069 34.783 0.00 0.00 0.00 1.82
3765 4760 5.261209 TCACTTTGGGTCAGTTGATTTTG 57.739 39.130 0.00 0.00 0.00 2.44
3766 4761 4.709397 TCACTTTGGGTCAGTTGATTTTGT 59.291 37.500 0.00 0.00 0.00 2.83
3767 4762 4.805192 CACTTTGGGTCAGTTGATTTTGTG 59.195 41.667 0.00 0.00 0.00 3.33
3768 4763 4.709397 ACTTTGGGTCAGTTGATTTTGTGA 59.291 37.500 0.00 0.00 0.00 3.58
3769 4764 4.647424 TTGGGTCAGTTGATTTTGTGAC 57.353 40.909 0.00 0.00 38.89 3.67
3775 4770 6.515043 GTCAGTTGATTTTGTGACCATTTG 57.485 37.500 0.00 0.00 34.45 2.32
3776 4771 6.272318 GTCAGTTGATTTTGTGACCATTTGA 58.728 36.000 0.00 0.00 34.45 2.69
3777 4772 6.925165 GTCAGTTGATTTTGTGACCATTTGAT 59.075 34.615 0.00 0.00 34.45 2.57
3778 4773 7.439056 GTCAGTTGATTTTGTGACCATTTGATT 59.561 33.333 0.00 0.00 34.45 2.57
3779 4774 7.652909 TCAGTTGATTTTGTGACCATTTGATTC 59.347 33.333 0.00 0.00 0.00 2.52
3780 4775 7.654520 CAGTTGATTTTGTGACCATTTGATTCT 59.345 33.333 0.00 0.00 0.00 2.40
3781 4776 7.654520 AGTTGATTTTGTGACCATTTGATTCTG 59.345 33.333 0.00 0.00 0.00 3.02
3782 4777 5.927689 TGATTTTGTGACCATTTGATTCTGC 59.072 36.000 0.00 0.00 0.00 4.26
3783 4778 5.534207 TTTTGTGACCATTTGATTCTGCT 57.466 34.783 0.00 0.00 0.00 4.24
3784 4779 5.534207 TTTGTGACCATTTGATTCTGCTT 57.466 34.783 0.00 0.00 0.00 3.91
3785 4780 5.534207 TTGTGACCATTTGATTCTGCTTT 57.466 34.783 0.00 0.00 0.00 3.51
3786 4781 4.873817 TGTGACCATTTGATTCTGCTTTG 58.126 39.130 0.00 0.00 0.00 2.77
3787 4782 4.583907 TGTGACCATTTGATTCTGCTTTGA 59.416 37.500 0.00 0.00 0.00 2.69
3788 4783 5.159209 GTGACCATTTGATTCTGCTTTGAG 58.841 41.667 0.00 0.00 0.00 3.02
3789 4784 5.048504 GTGACCATTTGATTCTGCTTTGAGA 60.049 40.000 0.00 0.00 0.00 3.27
3790 4785 5.713389 TGACCATTTGATTCTGCTTTGAGAT 59.287 36.000 0.00 0.00 0.00 2.75
3791 4786 5.962433 ACCATTTGATTCTGCTTTGAGATG 58.038 37.500 0.00 0.00 0.00 2.90
3792 4787 5.479375 ACCATTTGATTCTGCTTTGAGATGT 59.521 36.000 0.00 0.00 0.00 3.06
3793 4788 6.034591 CCATTTGATTCTGCTTTGAGATGTC 58.965 40.000 0.00 0.00 0.00 3.06
3794 4789 6.127703 CCATTTGATTCTGCTTTGAGATGTCT 60.128 38.462 0.00 0.00 0.00 3.41
3795 4790 5.874895 TTGATTCTGCTTTGAGATGTCTG 57.125 39.130 0.00 0.00 0.00 3.51
3796 4791 3.688185 TGATTCTGCTTTGAGATGTCTGC 59.312 43.478 0.00 0.00 0.00 4.26
3797 4792 3.413846 TTCTGCTTTGAGATGTCTGCT 57.586 42.857 0.00 0.00 0.00 4.24
3798 4793 2.696506 TCTGCTTTGAGATGTCTGCTG 58.303 47.619 0.00 0.00 0.00 4.41
3799 4794 2.038164 TCTGCTTTGAGATGTCTGCTGT 59.962 45.455 0.00 0.00 0.00 4.40
3800 4795 2.812591 CTGCTTTGAGATGTCTGCTGTT 59.187 45.455 0.00 0.00 0.00 3.16
3801 4796 3.216800 TGCTTTGAGATGTCTGCTGTTT 58.783 40.909 0.00 0.00 0.00 2.83
3802 4797 3.633525 TGCTTTGAGATGTCTGCTGTTTT 59.366 39.130 0.00 0.00 0.00 2.43
3803 4798 4.098349 TGCTTTGAGATGTCTGCTGTTTTT 59.902 37.500 0.00 0.00 0.00 1.94
3822 4817 1.515081 TTTTCCTTGTAACGCCCTCG 58.485 50.000 0.00 0.00 42.43 4.63
3823 4818 0.680618 TTTCCTTGTAACGCCCTCGA 59.319 50.000 0.00 0.00 39.41 4.04
3824 4819 0.899720 TTCCTTGTAACGCCCTCGAT 59.100 50.000 0.00 0.00 39.41 3.59
3825 4820 0.899720 TCCTTGTAACGCCCTCGATT 59.100 50.000 0.00 0.00 39.41 3.34
3826 4821 1.134907 TCCTTGTAACGCCCTCGATTC 60.135 52.381 0.00 0.00 39.41 2.52
3827 4822 0.921347 CTTGTAACGCCCTCGATTCG 59.079 55.000 0.00 0.00 39.41 3.34
3828 4823 0.527113 TTGTAACGCCCTCGATTCGA 59.473 50.000 8.70 8.70 39.41 3.71
3829 4824 0.742505 TGTAACGCCCTCGATTCGAT 59.257 50.000 9.54 0.00 39.41 3.59
3830 4825 1.268896 TGTAACGCCCTCGATTCGATC 60.269 52.381 9.54 1.57 39.41 3.69
3831 4826 1.026584 TAACGCCCTCGATTCGATCA 58.973 50.000 9.54 0.00 39.41 2.92
3832 4827 0.174845 AACGCCCTCGATTCGATCAA 59.825 50.000 9.54 0.00 39.41 2.57
3833 4828 0.249073 ACGCCCTCGATTCGATCAAG 60.249 55.000 9.54 4.92 39.41 3.02
3834 4829 1.552348 CGCCCTCGATTCGATCAAGC 61.552 60.000 9.54 9.04 38.10 4.01
3835 4830 0.530650 GCCCTCGATTCGATCAAGCA 60.531 55.000 9.54 0.00 34.61 3.91
3836 4831 1.495878 CCCTCGATTCGATCAAGCAG 58.504 55.000 9.54 0.00 34.61 4.24
3837 4832 1.495878 CCTCGATTCGATCAAGCAGG 58.504 55.000 9.54 1.56 34.61 4.85
3838 4833 1.495878 CTCGATTCGATCAAGCAGGG 58.504 55.000 9.54 0.00 34.61 4.45
3839 4834 0.104855 TCGATTCGATCAAGCAGGGG 59.895 55.000 4.29 0.00 0.00 4.79
3840 4835 0.104855 CGATTCGATCAAGCAGGGGA 59.895 55.000 0.00 0.00 0.00 4.81
3841 4836 1.270518 CGATTCGATCAAGCAGGGGAT 60.271 52.381 0.00 0.00 0.00 3.85
3842 4837 2.149578 GATTCGATCAAGCAGGGGATG 58.850 52.381 0.00 0.00 0.00 3.51
3843 4838 0.181114 TTCGATCAAGCAGGGGATGG 59.819 55.000 0.00 0.00 0.00 3.51
3844 4839 0.690744 TCGATCAAGCAGGGGATGGA 60.691 55.000 0.00 0.00 0.00 3.41
3845 4840 0.181114 CGATCAAGCAGGGGATGGAA 59.819 55.000 0.00 0.00 0.00 3.53
3846 4841 1.202855 CGATCAAGCAGGGGATGGAAT 60.203 52.381 0.00 0.00 0.00 3.01
3847 4842 2.750807 CGATCAAGCAGGGGATGGAATT 60.751 50.000 0.00 0.00 0.00 2.17
3848 4843 2.148446 TCAAGCAGGGGATGGAATTG 57.852 50.000 0.00 0.00 0.00 2.32
3849 4844 1.117150 CAAGCAGGGGATGGAATTGG 58.883 55.000 0.00 0.00 0.00 3.16
3850 4845 0.031817 AAGCAGGGGATGGAATTGGG 60.032 55.000 0.00 0.00 0.00 4.12
3851 4846 2.136229 GCAGGGGATGGAATTGGGC 61.136 63.158 0.00 0.00 0.00 5.36
3852 4847 1.622499 CAGGGGATGGAATTGGGCT 59.378 57.895 0.00 0.00 0.00 5.19
3853 4848 0.757935 CAGGGGATGGAATTGGGCTG 60.758 60.000 0.00 0.00 0.00 4.85
3854 4849 2.136229 GGGGATGGAATTGGGCTGC 61.136 63.158 0.00 0.00 0.00 5.25
3855 4850 2.492773 GGGATGGAATTGGGCTGCG 61.493 63.158 0.00 0.00 0.00 5.18
3856 4851 2.492773 GGATGGAATTGGGCTGCGG 61.493 63.158 0.00 0.00 0.00 5.69
3857 4852 3.142820 GATGGAATTGGGCTGCGGC 62.143 63.158 9.72 9.72 37.82 6.53
3858 4853 3.667217 ATGGAATTGGGCTGCGGCT 62.667 57.895 18.85 0.00 38.73 5.52
3859 4854 3.521796 GGAATTGGGCTGCGGCTC 61.522 66.667 18.85 15.47 39.89 4.70
3860 4855 3.880846 GAATTGGGCTGCGGCTCG 61.881 66.667 18.85 0.00 43.00 5.03
3874 4869 4.711949 CTCGGCTGTTGGGCTGCT 62.712 66.667 0.00 0.00 41.14 4.24
3877 4872 2.598394 GGCTGTTGGGCTGCTGAA 60.598 61.111 0.00 0.00 41.14 3.02
3878 4873 2.633509 GGCTGTTGGGCTGCTGAAG 61.634 63.158 0.00 0.00 41.14 3.02
3889 4884 2.292103 CTGCTGAAGCTACTGGTCTC 57.708 55.000 3.61 0.00 42.66 3.36
3890 4885 1.824230 CTGCTGAAGCTACTGGTCTCT 59.176 52.381 3.61 0.00 42.66 3.10
3891 4886 3.020274 CTGCTGAAGCTACTGGTCTCTA 58.980 50.000 3.61 0.00 42.66 2.43
3892 4887 3.020274 TGCTGAAGCTACTGGTCTCTAG 58.980 50.000 3.61 0.00 42.66 2.43
3893 4888 2.360801 GCTGAAGCTACTGGTCTCTAGG 59.639 54.545 0.00 0.00 38.21 3.02
3894 4889 2.360801 CTGAAGCTACTGGTCTCTAGGC 59.639 54.545 0.00 0.00 0.00 3.93
3895 4890 2.024846 TGAAGCTACTGGTCTCTAGGCT 60.025 50.000 0.00 0.00 0.00 4.58
3896 4891 2.065899 AGCTACTGGTCTCTAGGCTG 57.934 55.000 0.00 0.00 0.00 4.85
3897 4892 0.387565 GCTACTGGTCTCTAGGCTGC 59.612 60.000 0.00 0.00 0.00 5.25
3898 4893 0.665835 CTACTGGTCTCTAGGCTGCG 59.334 60.000 0.00 0.00 0.00 5.18
3899 4894 1.384989 TACTGGTCTCTAGGCTGCGC 61.385 60.000 0.00 0.00 0.00 6.09
3900 4895 2.363018 TGGTCTCTAGGCTGCGCT 60.363 61.111 9.73 0.00 0.00 5.92
3901 4896 2.105930 GGTCTCTAGGCTGCGCTG 59.894 66.667 9.73 10.04 0.00 5.18
3902 4897 2.584694 GTCTCTAGGCTGCGCTGC 60.585 66.667 28.81 28.81 0.00 5.25
3903 4898 2.757508 TCTCTAGGCTGCGCTGCT 60.758 61.111 33.50 22.88 0.00 4.24
3904 4899 2.585524 CTCTAGGCTGCGCTGCTG 60.586 66.667 33.50 23.93 0.00 4.41
3911 4906 2.952245 CTGCGCTGCTGCTCTTTT 59.048 55.556 9.73 0.00 36.97 2.27
3912 4907 1.285023 CTGCGCTGCTGCTCTTTTT 59.715 52.632 9.73 0.00 36.97 1.94
3941 4936 8.450578 TTTCTTCAAACAGAAATAGAAGAGCA 57.549 30.769 0.00 0.00 43.66 4.26
3942 4937 8.450578 TTCTTCAAACAGAAATAGAAGAGCAA 57.549 30.769 0.00 0.00 43.66 3.91
3943 4938 8.450578 TCTTCAAACAGAAATAGAAGAGCAAA 57.549 30.769 0.00 0.00 39.60 3.68
3944 4939 8.902806 TCTTCAAACAGAAATAGAAGAGCAAAA 58.097 29.630 0.00 0.00 39.60 2.44
3945 4940 9.688592 CTTCAAACAGAAATAGAAGAGCAAAAT 57.311 29.630 0.00 0.00 38.30 1.82
3946 4941 9.683069 TTCAAACAGAAATAGAAGAGCAAAATC 57.317 29.630 0.00 0.00 32.05 2.17
3947 4942 8.849168 TCAAACAGAAATAGAAGAGCAAAATCA 58.151 29.630 0.00 0.00 0.00 2.57
3948 4943 8.909671 CAAACAGAAATAGAAGAGCAAAATCAC 58.090 33.333 0.00 0.00 0.00 3.06
3949 4944 7.750229 ACAGAAATAGAAGAGCAAAATCACA 57.250 32.000 0.00 0.00 0.00 3.58
3950 4945 7.814642 ACAGAAATAGAAGAGCAAAATCACAG 58.185 34.615 0.00 0.00 0.00 3.66
3951 4946 7.663081 ACAGAAATAGAAGAGCAAAATCACAGA 59.337 33.333 0.00 0.00 0.00 3.41
3952 4947 8.509690 CAGAAATAGAAGAGCAAAATCACAGAA 58.490 33.333 0.00 0.00 0.00 3.02
3953 4948 8.728833 AGAAATAGAAGAGCAAAATCACAGAAG 58.271 33.333 0.00 0.00 0.00 2.85
3954 4949 8.627208 AAATAGAAGAGCAAAATCACAGAAGA 57.373 30.769 0.00 0.00 0.00 2.87
3955 4950 8.627208 AATAGAAGAGCAAAATCACAGAAGAA 57.373 30.769 0.00 0.00 0.00 2.52
3956 4951 8.804912 ATAGAAGAGCAAAATCACAGAAGAAT 57.195 30.769 0.00 0.00 0.00 2.40
3957 4952 7.521871 AGAAGAGCAAAATCACAGAAGAATT 57.478 32.000 0.00 0.00 0.00 2.17
3958 4953 7.368833 AGAAGAGCAAAATCACAGAAGAATTG 58.631 34.615 0.00 0.00 0.00 2.32
3959 4954 6.022163 AGAGCAAAATCACAGAAGAATTGG 57.978 37.500 0.00 0.00 0.00 3.16
3960 4955 5.771666 AGAGCAAAATCACAGAAGAATTGGA 59.228 36.000 0.00 0.00 0.00 3.53
3961 4956 6.022163 AGCAAAATCACAGAAGAATTGGAG 57.978 37.500 0.00 0.00 0.00 3.86
3962 4957 5.771666 AGCAAAATCACAGAAGAATTGGAGA 59.228 36.000 0.00 0.00 0.00 3.71
3963 4958 6.072064 AGCAAAATCACAGAAGAATTGGAGAG 60.072 38.462 0.00 0.00 0.00 3.20
3964 4959 6.618811 CAAAATCACAGAAGAATTGGAGAGG 58.381 40.000 0.00 0.00 0.00 3.69
3965 4960 3.988976 TCACAGAAGAATTGGAGAGGG 57.011 47.619 0.00 0.00 0.00 4.30
3966 4961 3.251484 TCACAGAAGAATTGGAGAGGGT 58.749 45.455 0.00 0.00 0.00 4.34
3967 4962 3.652869 TCACAGAAGAATTGGAGAGGGTT 59.347 43.478 0.00 0.00 0.00 4.11
3968 4963 3.755378 CACAGAAGAATTGGAGAGGGTTG 59.245 47.826 0.00 0.00 0.00 3.77
3969 4964 3.395941 ACAGAAGAATTGGAGAGGGTTGT 59.604 43.478 0.00 0.00 0.00 3.32
3970 4965 3.755378 CAGAAGAATTGGAGAGGGTTGTG 59.245 47.826 0.00 0.00 0.00 3.33
3971 4966 3.652869 AGAAGAATTGGAGAGGGTTGTGA 59.347 43.478 0.00 0.00 0.00 3.58
3972 4967 3.710209 AGAATTGGAGAGGGTTGTGAG 57.290 47.619 0.00 0.00 0.00 3.51
3973 4968 3.251484 AGAATTGGAGAGGGTTGTGAGA 58.749 45.455 0.00 0.00 0.00 3.27
3974 4969 3.262915 AGAATTGGAGAGGGTTGTGAGAG 59.737 47.826 0.00 0.00 0.00 3.20
3975 4970 2.398754 TTGGAGAGGGTTGTGAGAGA 57.601 50.000 0.00 0.00 0.00 3.10
3976 4971 2.630889 TGGAGAGGGTTGTGAGAGAT 57.369 50.000 0.00 0.00 0.00 2.75
3977 4972 3.757947 TGGAGAGGGTTGTGAGAGATA 57.242 47.619 0.00 0.00 0.00 1.98
3978 4973 4.271807 TGGAGAGGGTTGTGAGAGATAT 57.728 45.455 0.00 0.00 0.00 1.63
3979 4974 3.963374 TGGAGAGGGTTGTGAGAGATATG 59.037 47.826 0.00 0.00 0.00 1.78
3980 4975 4.219115 GGAGAGGGTTGTGAGAGATATGA 58.781 47.826 0.00 0.00 0.00 2.15
3981 4976 4.651503 GGAGAGGGTTGTGAGAGATATGAA 59.348 45.833 0.00 0.00 0.00 2.57
3982 4977 5.452636 GGAGAGGGTTGTGAGAGATATGAAC 60.453 48.000 0.00 0.00 0.00 3.18
3983 4978 5.026121 AGAGGGTTGTGAGAGATATGAACA 58.974 41.667 0.00 0.00 0.00 3.18
3984 4979 5.664908 AGAGGGTTGTGAGAGATATGAACAT 59.335 40.000 0.00 0.00 0.00 2.71
3985 4980 6.841229 AGAGGGTTGTGAGAGATATGAACATA 59.159 38.462 0.00 0.00 0.00 2.29
3986 4981 7.512058 AGAGGGTTGTGAGAGATATGAACATAT 59.488 37.037 6.98 6.98 36.75 1.78
3987 4982 7.675062 AGGGTTGTGAGAGATATGAACATATC 58.325 38.462 20.57 20.57 46.23 1.63
3988 4983 6.876257 GGGTTGTGAGAGATATGAACATATCC 59.124 42.308 22.97 16.89 46.77 2.59
3989 4984 7.445121 GGTTGTGAGAGATATGAACATATCCA 58.555 38.462 22.97 15.07 46.77 3.41
3990 4985 8.099537 GGTTGTGAGAGATATGAACATATCCAT 58.900 37.037 22.97 15.57 46.77 3.41
3991 4986 8.933807 GTTGTGAGAGATATGAACATATCCATG 58.066 37.037 22.97 0.00 46.77 3.66
3992 4987 7.618137 TGTGAGAGATATGAACATATCCATGG 58.382 38.462 22.97 4.97 46.77 3.66
3993 4988 7.455638 TGTGAGAGATATGAACATATCCATGGA 59.544 37.037 18.88 18.88 46.77 3.41
3994 4989 7.980662 GTGAGAGATATGAACATATCCATGGAG 59.019 40.741 21.33 9.32 46.77 3.86
3995 4990 7.677319 TGAGAGATATGAACATATCCATGGAGT 59.323 37.037 21.33 10.03 46.77 3.85
3996 4991 8.076910 AGAGATATGAACATATCCATGGAGTC 57.923 38.462 21.33 11.99 46.77 3.36
3997 4992 7.125507 AGAGATATGAACATATCCATGGAGTCC 59.874 40.741 21.33 0.73 46.77 3.85
3998 4993 6.732390 AGATATGAACATATCCATGGAGTCCA 59.268 38.462 21.33 15.88 46.77 4.02
3999 4994 4.694760 TGAACATATCCATGGAGTCCAG 57.305 45.455 21.33 10.34 36.75 3.86
4000 4995 3.392285 TGAACATATCCATGGAGTCCAGG 59.608 47.826 21.33 17.87 36.75 4.45
4001 4996 3.350992 ACATATCCATGGAGTCCAGGA 57.649 47.619 25.19 24.58 37.52 3.86
4002 4997 3.879346 ACATATCCATGGAGTCCAGGAT 58.121 45.455 30.12 30.12 41.19 3.24
4003 4998 4.246143 ACATATCCATGGAGTCCAGGATT 58.754 43.478 31.40 21.82 39.94 3.01
4004 4999 4.666907 ACATATCCATGGAGTCCAGGATTT 59.333 41.667 31.40 25.11 39.94 2.17
4005 5000 5.135020 ACATATCCATGGAGTCCAGGATTTT 59.865 40.000 31.40 22.26 39.94 1.82
4006 5001 4.614967 ATCCATGGAGTCCAGGATTTTT 57.385 40.909 25.19 9.86 37.52 1.94
4007 5002 3.700538 TCCATGGAGTCCAGGATTTTTG 58.299 45.455 25.19 12.18 37.52 2.44
4008 5003 2.167075 CCATGGAGTCCAGGATTTTTGC 59.833 50.000 25.19 0.00 37.52 3.68
4009 5004 2.673775 TGGAGTCCAGGATTTTTGCA 57.326 45.000 8.12 0.00 0.00 4.08
4010 5005 2.517959 TGGAGTCCAGGATTTTTGCAG 58.482 47.619 8.12 0.00 0.00 4.41
4011 5006 2.108075 TGGAGTCCAGGATTTTTGCAGA 59.892 45.455 8.12 0.00 0.00 4.26
4012 5007 3.157087 GGAGTCCAGGATTTTTGCAGAA 58.843 45.455 3.60 0.00 0.00 3.02
4013 5008 3.766051 GGAGTCCAGGATTTTTGCAGAAT 59.234 43.478 3.60 0.00 0.00 2.40
4014 5009 4.221482 GGAGTCCAGGATTTTTGCAGAATT 59.779 41.667 3.60 0.00 0.00 2.17
4015 5010 5.279657 GGAGTCCAGGATTTTTGCAGAATTT 60.280 40.000 3.60 0.00 0.00 1.82
4016 5011 5.544650 AGTCCAGGATTTTTGCAGAATTTG 58.455 37.500 0.00 0.00 0.00 2.32
4017 5012 5.305128 AGTCCAGGATTTTTGCAGAATTTGA 59.695 36.000 0.00 0.00 0.00 2.69
4018 5013 5.406477 GTCCAGGATTTTTGCAGAATTTGAC 59.594 40.000 0.00 0.00 0.00 3.18
4019 5014 5.305128 TCCAGGATTTTTGCAGAATTTGACT 59.695 36.000 0.00 0.00 0.00 3.41
4020 5015 6.493115 TCCAGGATTTTTGCAGAATTTGACTA 59.507 34.615 0.00 0.00 0.00 2.59
4021 5016 7.015098 TCCAGGATTTTTGCAGAATTTGACTAA 59.985 33.333 0.00 0.00 0.00 2.24
4022 5017 7.656948 CCAGGATTTTTGCAGAATTTGACTAAA 59.343 33.333 0.00 0.00 0.00 1.85
4023 5018 9.211485 CAGGATTTTTGCAGAATTTGACTAAAT 57.789 29.630 0.00 0.00 38.11 1.40
4024 5019 9.783081 AGGATTTTTGCAGAATTTGACTAAATT 57.217 25.926 0.00 0.00 46.35 1.82
4031 5026 8.592105 TGCAGAATTTGACTAAATTTCTTTGG 57.408 30.769 0.00 0.00 44.35 3.28
4032 5027 7.656948 TGCAGAATTTGACTAAATTTCTTTGGG 59.343 33.333 0.00 0.00 44.35 4.12
4033 5028 7.360353 GCAGAATTTGACTAAATTTCTTTGGGC 60.360 37.037 0.00 0.00 44.35 5.36
4034 5029 7.656948 CAGAATTTGACTAAATTTCTTTGGGCA 59.343 33.333 0.00 0.00 44.35 5.36
4035 5030 8.377799 AGAATTTGACTAAATTTCTTTGGGCAT 58.622 29.630 0.00 0.00 44.35 4.40
4036 5031 8.922931 AATTTGACTAAATTTCTTTGGGCATT 57.077 26.923 0.00 0.00 40.18 3.56
4037 5032 8.922931 ATTTGACTAAATTTCTTTGGGCATTT 57.077 26.923 0.00 0.00 40.18 2.32
4038 5033 8.744568 TTTGACTAAATTTCTTTGGGCATTTT 57.255 26.923 0.00 0.00 40.18 1.82
4039 5034 8.744568 TTGACTAAATTTCTTTGGGCATTTTT 57.255 26.923 0.00 0.00 40.18 1.94
4040 5035 9.838339 TTGACTAAATTTCTTTGGGCATTTTTA 57.162 25.926 0.00 0.00 40.18 1.52
4041 5036 9.487790 TGACTAAATTTCTTTGGGCATTTTTAG 57.512 29.630 0.00 0.00 36.08 1.85
4042 5037 9.705290 GACTAAATTTCTTTGGGCATTTTTAGA 57.295 29.630 0.00 0.00 31.44 2.10
4043 5038 9.710900 ACTAAATTTCTTTGGGCATTTTTAGAG 57.289 29.630 0.00 0.00 32.48 2.43
4044 5039 7.984422 AAATTTCTTTGGGCATTTTTAGAGG 57.016 32.000 0.00 0.00 0.00 3.69
4045 5040 6.686484 ATTTCTTTGGGCATTTTTAGAGGT 57.314 33.333 0.00 0.00 0.00 3.85
4046 5041 7.790782 ATTTCTTTGGGCATTTTTAGAGGTA 57.209 32.000 0.00 0.00 0.00 3.08
4047 5042 6.834168 TTCTTTGGGCATTTTTAGAGGTAG 57.166 37.500 0.00 0.00 0.00 3.18
4048 5043 6.134535 TCTTTGGGCATTTTTAGAGGTAGA 57.865 37.500 0.00 0.00 0.00 2.59
4049 5044 6.548321 TCTTTGGGCATTTTTAGAGGTAGAA 58.452 36.000 0.00 0.00 0.00 2.10
4050 5045 7.007723 TCTTTGGGCATTTTTAGAGGTAGAAA 58.992 34.615 0.00 0.00 0.00 2.52
4051 5046 7.507616 TCTTTGGGCATTTTTAGAGGTAGAAAA 59.492 33.333 0.00 0.00 0.00 2.29
4052 5047 7.604657 TTGGGCATTTTTAGAGGTAGAAAAA 57.395 32.000 0.00 0.00 38.51 1.94
4053 5048 7.790782 TGGGCATTTTTAGAGGTAGAAAAAT 57.209 32.000 0.00 0.00 42.93 1.82
4054 5049 8.887264 TGGGCATTTTTAGAGGTAGAAAAATA 57.113 30.769 5.32 0.00 41.19 1.40
4055 5050 9.315363 TGGGCATTTTTAGAGGTAGAAAAATAA 57.685 29.630 5.32 0.00 41.19 1.40
4066 5061 9.807921 AGAGGTAGAAAAATAATCCAAGTTTGA 57.192 29.630 0.00 0.00 0.00 2.69
4094 5089 9.743057 TTAAAGTGTAATTTTGGTGATGAGTTG 57.257 29.630 0.00 0.00 0.00 3.16
4095 5090 6.331369 AGTGTAATTTTGGTGATGAGTTGG 57.669 37.500 0.00 0.00 0.00 3.77
4096 5091 6.068010 AGTGTAATTTTGGTGATGAGTTGGA 58.932 36.000 0.00 0.00 0.00 3.53
4097 5092 6.721208 AGTGTAATTTTGGTGATGAGTTGGAT 59.279 34.615 0.00 0.00 0.00 3.41
4098 5093 7.233348 AGTGTAATTTTGGTGATGAGTTGGATT 59.767 33.333 0.00 0.00 0.00 3.01
4099 5094 7.329226 GTGTAATTTTGGTGATGAGTTGGATTG 59.671 37.037 0.00 0.00 0.00 2.67
4100 5095 6.423776 AATTTTGGTGATGAGTTGGATTGT 57.576 33.333 0.00 0.00 0.00 2.71
4101 5096 4.852134 TTTGGTGATGAGTTGGATTGTG 57.148 40.909 0.00 0.00 0.00 3.33
4102 5097 3.507162 TGGTGATGAGTTGGATTGTGT 57.493 42.857 0.00 0.00 0.00 3.72
4103 5098 3.148412 TGGTGATGAGTTGGATTGTGTG 58.852 45.455 0.00 0.00 0.00 3.82
4104 5099 2.489329 GGTGATGAGTTGGATTGTGTGG 59.511 50.000 0.00 0.00 0.00 4.17
4105 5100 3.411446 GTGATGAGTTGGATTGTGTGGA 58.589 45.455 0.00 0.00 0.00 4.02
4106 5101 3.820467 GTGATGAGTTGGATTGTGTGGAA 59.180 43.478 0.00 0.00 0.00 3.53
4107 5102 4.460382 GTGATGAGTTGGATTGTGTGGAAT 59.540 41.667 0.00 0.00 0.00 3.01
4108 5103 5.047802 GTGATGAGTTGGATTGTGTGGAATT 60.048 40.000 0.00 0.00 0.00 2.17
4109 5104 4.852134 TGAGTTGGATTGTGTGGAATTG 57.148 40.909 0.00 0.00 0.00 2.32
4110 5105 4.468713 TGAGTTGGATTGTGTGGAATTGA 58.531 39.130 0.00 0.00 0.00 2.57
4111 5106 5.078949 TGAGTTGGATTGTGTGGAATTGAT 58.921 37.500 0.00 0.00 0.00 2.57
4112 5107 5.539574 TGAGTTGGATTGTGTGGAATTGATT 59.460 36.000 0.00 0.00 0.00 2.57
4113 5108 5.786311 AGTTGGATTGTGTGGAATTGATTG 58.214 37.500 0.00 0.00 0.00 2.67
4114 5109 5.539574 AGTTGGATTGTGTGGAATTGATTGA 59.460 36.000 0.00 0.00 0.00 2.57
4115 5110 5.389859 TGGATTGTGTGGAATTGATTGAC 57.610 39.130 0.00 0.00 0.00 3.18
4116 5111 4.220382 TGGATTGTGTGGAATTGATTGACC 59.780 41.667 0.00 0.00 0.00 4.02
4117 5112 4.463891 GGATTGTGTGGAATTGATTGACCT 59.536 41.667 0.00 0.00 0.00 3.85
4118 5113 5.393461 GGATTGTGTGGAATTGATTGACCTC 60.393 44.000 0.00 0.00 0.00 3.85
4119 5114 4.371624 TGTGTGGAATTGATTGACCTCT 57.628 40.909 0.00 0.00 0.00 3.69
4120 5115 5.497464 TGTGTGGAATTGATTGACCTCTA 57.503 39.130 0.00 0.00 0.00 2.43
4121 5116 6.065976 TGTGTGGAATTGATTGACCTCTAT 57.934 37.500 0.00 0.00 0.00 1.98
4122 5117 6.484288 TGTGTGGAATTGATTGACCTCTATT 58.516 36.000 0.00 0.00 0.00 1.73
4123 5118 6.947733 TGTGTGGAATTGATTGACCTCTATTT 59.052 34.615 0.00 0.00 0.00 1.40
4124 5119 7.451255 TGTGTGGAATTGATTGACCTCTATTTT 59.549 33.333 0.00 0.00 0.00 1.82
4125 5120 7.756722 GTGTGGAATTGATTGACCTCTATTTTG 59.243 37.037 0.00 0.00 0.00 2.44
4126 5121 7.093814 TGTGGAATTGATTGACCTCTATTTTGG 60.094 37.037 0.00 0.00 0.00 3.28
4127 5122 6.380846 TGGAATTGATTGACCTCTATTTTGGG 59.619 38.462 0.00 0.00 0.00 4.12
4128 5123 6.381133 GGAATTGATTGACCTCTATTTTGGGT 59.619 38.462 0.00 0.00 35.89 4.51
4129 5124 7.410120 AATTGATTGACCTCTATTTTGGGTC 57.590 36.000 0.00 0.00 46.80 4.46
4135 5130 4.906618 GACCTCTATTTTGGGTCAGTTGA 58.093 43.478 6.49 0.00 46.14 3.18
4136 5131 5.313712 GACCTCTATTTTGGGTCAGTTGAA 58.686 41.667 6.49 0.00 46.14 2.69
4137 5132 5.892348 ACCTCTATTTTGGGTCAGTTGAAT 58.108 37.500 0.00 0.00 0.00 2.57
4138 5133 6.314917 ACCTCTATTTTGGGTCAGTTGAATT 58.685 36.000 0.00 0.00 0.00 2.17
4139 5134 6.209391 ACCTCTATTTTGGGTCAGTTGAATTG 59.791 38.462 0.00 0.00 0.00 2.32
4140 5135 6.024552 TCTATTTTGGGTCAGTTGAATTGC 57.975 37.500 0.00 0.00 0.00 3.56
4141 5136 4.961438 ATTTTGGGTCAGTTGAATTGCT 57.039 36.364 0.00 0.00 0.00 3.91
4142 5137 4.751767 TTTTGGGTCAGTTGAATTGCTT 57.248 36.364 0.00 0.00 0.00 3.91
4143 5138 4.320608 TTTGGGTCAGTTGAATTGCTTC 57.679 40.909 0.00 0.00 0.00 3.86
4144 5139 3.228188 TGGGTCAGTTGAATTGCTTCT 57.772 42.857 0.00 0.00 32.29 2.85
4145 5140 3.565307 TGGGTCAGTTGAATTGCTTCTT 58.435 40.909 0.00 0.00 32.29 2.52
4146 5141 3.318839 TGGGTCAGTTGAATTGCTTCTTG 59.681 43.478 0.00 0.00 32.29 3.02
4147 5142 3.305608 GGGTCAGTTGAATTGCTTCTTGG 60.306 47.826 0.00 0.00 32.29 3.61
4148 5143 3.305608 GGTCAGTTGAATTGCTTCTTGGG 60.306 47.826 0.00 0.00 32.29 4.12
4149 5144 2.297033 TCAGTTGAATTGCTTCTTGGGC 59.703 45.455 0.00 0.00 32.29 5.36
4150 5145 2.298163 CAGTTGAATTGCTTCTTGGGCT 59.702 45.455 0.00 0.00 32.29 5.19
4151 5146 2.560105 AGTTGAATTGCTTCTTGGGCTC 59.440 45.455 0.00 0.00 32.29 4.70
4152 5147 2.560105 GTTGAATTGCTTCTTGGGCTCT 59.440 45.455 0.00 0.00 32.29 4.09
4153 5148 2.880443 TGAATTGCTTCTTGGGCTCTT 58.120 42.857 0.00 0.00 32.29 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 79 9.733556 AAAACTCTTTTAAACCCAGTGAAAAAT 57.266 25.926 0.00 0.00 0.00 1.82
116 119 8.814038 AAAAATATGAGGAGAATAGTGCAGTT 57.186 30.769 0.00 0.00 0.00 3.16
117 120 8.049117 TGAAAAATATGAGGAGAATAGTGCAGT 58.951 33.333 0.00 0.00 0.00 4.40
118 121 8.341173 GTGAAAAATATGAGGAGAATAGTGCAG 58.659 37.037 0.00 0.00 0.00 4.41
216 219 6.866480 TCTTGAATGATTTACCATTGAAGGC 58.134 36.000 13.09 0.00 43.31 4.35
339 380 5.306678 AGAGAGAGAAAGGACATGACTGTTT 59.693 40.000 0.00 0.00 35.14 2.83
353 394 4.997395 GTGTGTTGGCAATAGAGAGAGAAA 59.003 41.667 1.92 0.00 0.00 2.52
379 420 0.399949 TCCCTCCAGAACAGGTGTGT 60.400 55.000 0.00 0.00 39.19 3.72
380 421 0.987294 ATCCCTCCAGAACAGGTGTG 59.013 55.000 0.00 0.00 0.00 3.82
381 422 0.987294 CATCCCTCCAGAACAGGTGT 59.013 55.000 0.00 0.00 0.00 4.16
382 423 0.987294 ACATCCCTCCAGAACAGGTG 59.013 55.000 0.00 0.00 0.00 4.00
383 424 1.203364 AGACATCCCTCCAGAACAGGT 60.203 52.381 0.00 0.00 0.00 4.00
384 425 1.577736 AGACATCCCTCCAGAACAGG 58.422 55.000 0.00 0.00 0.00 4.00
401 442 3.214328 GAAAGAGGTGCCTGTTCAAAGA 58.786 45.455 0.94 0.00 0.00 2.52
404 445 2.172505 TCTGAAAGAGGTGCCTGTTCAA 59.827 45.455 12.35 1.08 38.67 2.69
497 553 8.665685 GCATATACCCGTTTATATTCTTTCCTG 58.334 37.037 0.00 0.00 0.00 3.86
516 572 7.849026 CACATAGGTTTGTTTGTACGCATATAC 59.151 37.037 0.00 0.00 0.00 1.47
517 573 7.764901 TCACATAGGTTTGTTTGTACGCATATA 59.235 33.333 0.00 0.00 0.00 0.86
565 624 7.414222 AGGGTCACTATAATTGAACGTTCTA 57.586 36.000 27.32 21.21 30.79 2.10
588 647 6.767902 GGCCACACATAACCATATCCATATAG 59.232 42.308 0.00 0.00 0.00 1.31
600 659 0.037590 TGGTGAGGCCACACATAACC 59.962 55.000 30.65 16.21 43.61 2.85
646 705 0.800012 TTATTCGCCGGCTGTGTTTC 59.200 50.000 26.68 0.00 0.00 2.78
663 729 5.589855 CCAGAGTTGGTGCATGTATTCATTA 59.410 40.000 0.00 0.00 39.79 1.90
715 781 0.593773 CCCCACGTTTTCTTTGCACG 60.594 55.000 0.00 0.00 39.86 5.34
723 789 0.322546 AGATGGAGCCCCACGTTTTC 60.323 55.000 0.00 0.00 46.98 2.29
775 854 1.028330 ATCGACGAACGTCCTAGCCA 61.028 55.000 19.15 0.49 41.76 4.75
778 857 0.591741 GCCATCGACGAACGTCCTAG 60.592 60.000 19.15 10.10 41.76 3.02
781 860 2.126228 TGCCATCGACGAACGTCC 60.126 61.111 19.15 7.48 41.76 4.79
811 890 2.354821 CCTCGCTTGTTTAACTATGCCC 59.645 50.000 0.00 0.00 0.00 5.36
881 960 3.068590 CCAGGGCAGGCATTAAATAACTG 59.931 47.826 0.00 0.00 0.00 3.16
934 1013 8.033038 CGCTAATGTGTAGGGTATGTGTTATAT 58.967 37.037 0.00 0.00 0.00 0.86
935 1014 7.372714 CGCTAATGTGTAGGGTATGTGTTATA 58.627 38.462 0.00 0.00 0.00 0.98
947 1026 0.459585 ACGCACCGCTAATGTGTAGG 60.460 55.000 0.00 0.00 38.98 3.18
963 1042 2.248487 CTAGTCGACCTTGTAACACGC 58.752 52.381 13.01 0.00 0.00 5.34
985 1064 1.135859 CGCCATTGCTCTTGACACTTC 60.136 52.381 0.00 0.00 34.43 3.01
1022 1101 0.106819 CCCCAGGAGGAGAAATGCAG 60.107 60.000 0.00 0.00 38.24 4.41
1024 1103 1.454663 GCCCCAGGAGGAGAAATGC 60.455 63.158 0.00 0.00 38.24 3.56
1365 1447 2.202797 CCGCTCTCCACCGTCATG 60.203 66.667 0.00 0.00 0.00 3.07
1581 1663 1.672356 CTCCCTGACCACGGCAAAG 60.672 63.158 0.00 0.00 0.00 2.77
1745 1841 3.719173 TTCCACGACATATATGCACGA 57.281 42.857 27.48 11.76 35.80 4.35
1879 2213 7.299246 TGGATAGTTGTTAGCCTACTAATCC 57.701 40.000 0.00 0.00 40.43 3.01
1936 2421 0.320421 TACCTTGCTCGTGCTGGTTC 60.320 55.000 24.24 0.00 42.80 3.62
1958 2443 3.385755 TCCCGAACCCATAAACTAGCTAC 59.614 47.826 0.00 0.00 0.00 3.58
2142 2947 3.973516 TCGCCGAACTCGTGCAGT 61.974 61.111 11.35 0.00 36.04 4.40
3208 4033 6.316140 ACATTAAAGTCAGCATCGCAATCTAA 59.684 34.615 0.00 0.00 0.00 2.10
3217 4042 5.464168 ACAAGCAACATTAAAGTCAGCATC 58.536 37.500 9.80 0.00 0.00 3.91
3273 4099 7.138692 AGTAACTTACTACAAGTACAGACGG 57.861 40.000 0.00 0.00 37.23 4.79
3284 4110 8.565896 TCGGATCAAACTAGTAACTTACTACA 57.434 34.615 4.76 0.00 40.14 2.74
3295 4123 4.705507 TCAAGTAGCTCGGATCAAACTAGT 59.294 41.667 0.00 0.00 0.00 2.57
3296 4124 5.250235 TCAAGTAGCTCGGATCAAACTAG 57.750 43.478 0.00 0.00 0.00 2.57
3297 4125 5.127194 ACATCAAGTAGCTCGGATCAAACTA 59.873 40.000 0.00 0.00 0.00 2.24
3298 4126 4.081420 ACATCAAGTAGCTCGGATCAAACT 60.081 41.667 0.00 0.00 0.00 2.66
3325 4153 9.420118 TCAGAACAATAGGCAAACCATAATATT 57.580 29.630 0.00 0.00 39.06 1.28
3328 4156 7.902920 ATCAGAACAATAGGCAAACCATAAT 57.097 32.000 0.00 0.00 39.06 1.28
3339 4167 5.902613 TTGCTTCCAATCAGAACAATAGG 57.097 39.130 0.00 0.00 0.00 2.57
3406 4234 3.197116 TGCCCTAAAGTCTAACCTGTAGC 59.803 47.826 0.00 0.00 0.00 3.58
3466 4294 3.084039 ACCAAACAATCATGCGTCATCT 58.916 40.909 0.00 0.00 0.00 2.90
3468 4296 2.819019 TGACCAAACAATCATGCGTCAT 59.181 40.909 0.00 0.00 0.00 3.06
3580 4571 6.592607 TCATTACTGAATCGTTCAAGTTACCC 59.407 38.462 2.82 0.00 39.58 3.69
3581 4572 7.544566 TCTCATTACTGAATCGTTCAAGTTACC 59.455 37.037 2.82 0.00 39.58 2.85
3582 4573 8.462143 TCTCATTACTGAATCGTTCAAGTTAC 57.538 34.615 2.82 0.00 39.58 2.50
3583 4574 9.653287 AATCTCATTACTGAATCGTTCAAGTTA 57.347 29.630 2.82 0.00 39.58 2.24
3585 4576 7.819415 TCAATCTCATTACTGAATCGTTCAAGT 59.181 33.333 2.82 5.53 39.58 3.16
3586 4577 8.189709 TCAATCTCATTACTGAATCGTTCAAG 57.810 34.615 2.82 0.00 39.58 3.02
3602 4597 7.434927 TTTCTCTCTCCAAGATCAATCTCAT 57.565 36.000 0.00 0.00 35.76 2.90
3621 4616 8.021396 GGTACACCAAACATATCACTTTTTCTC 58.979 37.037 0.00 0.00 35.64 2.87
3630 4625 5.012664 ACTGACTGGTACACCAAACATATCA 59.987 40.000 2.14 0.16 46.97 2.15
3661 4656 3.490155 TGCGCATGAACTGTTTTCAAATG 59.510 39.130 5.66 0.00 31.55 2.32
3677 4672 0.743688 TGAACAAAACCTGTGCGCAT 59.256 45.000 15.91 0.00 36.16 4.73
3701 4696 5.975344 CGTATAGCTAAAGTGATTCCGTTCA 59.025 40.000 0.00 0.00 0.00 3.18
3711 4706 4.280461 CCGACTGACGTATAGCTAAAGTG 58.720 47.826 0.00 0.00 40.78 3.16
3712 4707 3.243002 GCCGACTGACGTATAGCTAAAGT 60.243 47.826 0.00 0.00 40.78 2.66
3713 4708 3.003482 AGCCGACTGACGTATAGCTAAAG 59.997 47.826 0.00 0.00 40.78 1.85
3714 4709 2.947652 AGCCGACTGACGTATAGCTAAA 59.052 45.455 0.00 0.00 40.78 1.85
3715 4710 2.569059 AGCCGACTGACGTATAGCTAA 58.431 47.619 0.00 0.00 40.78 3.09
3716 4711 2.251409 AGCCGACTGACGTATAGCTA 57.749 50.000 0.00 0.00 40.78 3.32
3717 4712 3.097461 AGCCGACTGACGTATAGCT 57.903 52.632 0.00 0.00 40.78 3.32
3727 4722 3.904136 AGTGAAATTTTCAGCCGACTG 57.096 42.857 12.02 0.00 45.95 3.51
3728 4723 4.499696 CCAAAGTGAAATTTTCAGCCGACT 60.500 41.667 12.02 3.12 41.01 4.18
3729 4724 3.735746 CCAAAGTGAAATTTTCAGCCGAC 59.264 43.478 12.02 0.86 41.01 4.79
3730 4725 3.243704 CCCAAAGTGAAATTTTCAGCCGA 60.244 43.478 12.02 0.00 41.01 5.54
3731 4726 3.059166 CCCAAAGTGAAATTTTCAGCCG 58.941 45.455 12.02 2.25 41.01 5.52
3732 4727 4.058124 GACCCAAAGTGAAATTTTCAGCC 58.942 43.478 12.02 2.23 41.01 4.85
3733 4728 4.692228 TGACCCAAAGTGAAATTTTCAGC 58.308 39.130 12.02 7.62 41.01 4.26
3734 4729 5.906073 ACTGACCCAAAGTGAAATTTTCAG 58.094 37.500 12.02 8.48 41.01 3.02
3735 4730 5.930837 ACTGACCCAAAGTGAAATTTTCA 57.069 34.783 7.74 7.74 37.33 2.69
3736 4731 6.337356 TCAACTGACCCAAAGTGAAATTTTC 58.663 36.000 2.05 2.05 0.00 2.29
3737 4732 6.293004 TCAACTGACCCAAAGTGAAATTTT 57.707 33.333 0.00 0.00 0.00 1.82
3738 4733 5.930837 TCAACTGACCCAAAGTGAAATTT 57.069 34.783 0.00 0.00 0.00 1.82
3739 4734 6.484364 AATCAACTGACCCAAAGTGAAATT 57.516 33.333 0.00 0.00 0.00 1.82
3740 4735 6.484364 AAATCAACTGACCCAAAGTGAAAT 57.516 33.333 0.00 0.00 0.00 2.17
3741 4736 5.930837 AAATCAACTGACCCAAAGTGAAA 57.069 34.783 0.00 0.00 0.00 2.69
3742 4737 5.186797 ACAAAATCAACTGACCCAAAGTGAA 59.813 36.000 0.00 0.00 0.00 3.18
3743 4738 4.709397 ACAAAATCAACTGACCCAAAGTGA 59.291 37.500 0.00 0.00 0.00 3.41
3744 4739 4.805192 CACAAAATCAACTGACCCAAAGTG 59.195 41.667 0.00 0.00 0.00 3.16
3745 4740 4.709397 TCACAAAATCAACTGACCCAAAGT 59.291 37.500 0.00 0.00 0.00 2.66
3746 4741 5.043248 GTCACAAAATCAACTGACCCAAAG 58.957 41.667 0.00 0.00 0.00 2.77
3747 4742 4.142049 GGTCACAAAATCAACTGACCCAAA 60.142 41.667 4.59 0.00 44.81 3.28
3748 4743 3.383185 GGTCACAAAATCAACTGACCCAA 59.617 43.478 4.59 0.00 44.81 4.12
3749 4744 2.955660 GGTCACAAAATCAACTGACCCA 59.044 45.455 4.59 0.00 44.81 4.51
3750 4745 3.643159 GGTCACAAAATCAACTGACCC 57.357 47.619 4.59 0.00 44.81 4.46
3752 4747 6.272318 TCAAATGGTCACAAAATCAACTGAC 58.728 36.000 0.00 0.00 33.61 3.51
3753 4748 6.462552 TCAAATGGTCACAAAATCAACTGA 57.537 33.333 0.00 0.00 0.00 3.41
3754 4749 7.654520 AGAATCAAATGGTCACAAAATCAACTG 59.345 33.333 0.00 0.00 0.00 3.16
3755 4750 7.654520 CAGAATCAAATGGTCACAAAATCAACT 59.345 33.333 0.00 0.00 0.00 3.16
3756 4751 7.569957 GCAGAATCAAATGGTCACAAAATCAAC 60.570 37.037 0.00 0.00 0.00 3.18
3757 4752 6.424509 GCAGAATCAAATGGTCACAAAATCAA 59.575 34.615 0.00 0.00 0.00 2.57
3758 4753 5.927689 GCAGAATCAAATGGTCACAAAATCA 59.072 36.000 0.00 0.00 0.00 2.57
3759 4754 6.161381 AGCAGAATCAAATGGTCACAAAATC 58.839 36.000 0.00 0.00 0.00 2.17
3760 4755 6.105397 AGCAGAATCAAATGGTCACAAAAT 57.895 33.333 0.00 0.00 0.00 1.82
3761 4756 5.534207 AGCAGAATCAAATGGTCACAAAA 57.466 34.783 0.00 0.00 0.00 2.44
3762 4757 5.534207 AAGCAGAATCAAATGGTCACAAA 57.466 34.783 0.00 0.00 0.00 2.83
3763 4758 5.068855 TCAAAGCAGAATCAAATGGTCACAA 59.931 36.000 0.00 0.00 0.00 3.33
3764 4759 4.583907 TCAAAGCAGAATCAAATGGTCACA 59.416 37.500 0.00 0.00 0.00 3.58
3765 4760 5.048504 TCTCAAAGCAGAATCAAATGGTCAC 60.049 40.000 0.00 0.00 0.00 3.67
3766 4761 5.072055 TCTCAAAGCAGAATCAAATGGTCA 58.928 37.500 0.00 0.00 0.00 4.02
3767 4762 5.633830 TCTCAAAGCAGAATCAAATGGTC 57.366 39.130 0.00 0.00 0.00 4.02
3768 4763 5.479375 ACATCTCAAAGCAGAATCAAATGGT 59.521 36.000 0.00 0.00 0.00 3.55
3769 4764 5.962433 ACATCTCAAAGCAGAATCAAATGG 58.038 37.500 0.00 0.00 0.00 3.16
3770 4765 6.747739 CAGACATCTCAAAGCAGAATCAAATG 59.252 38.462 0.00 0.00 0.00 2.32
3771 4766 6.625300 GCAGACATCTCAAAGCAGAATCAAAT 60.625 38.462 0.00 0.00 0.00 2.32
3772 4767 5.335426 GCAGACATCTCAAAGCAGAATCAAA 60.335 40.000 0.00 0.00 0.00 2.69
3773 4768 4.155462 GCAGACATCTCAAAGCAGAATCAA 59.845 41.667 0.00 0.00 0.00 2.57
3774 4769 3.688185 GCAGACATCTCAAAGCAGAATCA 59.312 43.478 0.00 0.00 0.00 2.57
3775 4770 3.940221 AGCAGACATCTCAAAGCAGAATC 59.060 43.478 0.00 0.00 0.00 2.52
3776 4771 3.690139 CAGCAGACATCTCAAAGCAGAAT 59.310 43.478 0.00 0.00 0.00 2.40
3777 4772 3.072211 CAGCAGACATCTCAAAGCAGAA 58.928 45.455 0.00 0.00 0.00 3.02
3778 4773 2.038164 ACAGCAGACATCTCAAAGCAGA 59.962 45.455 0.00 0.00 0.00 4.26
3779 4774 2.424557 ACAGCAGACATCTCAAAGCAG 58.575 47.619 0.00 0.00 0.00 4.24
3780 4775 2.556144 ACAGCAGACATCTCAAAGCA 57.444 45.000 0.00 0.00 0.00 3.91
3781 4776 3.911661 AAACAGCAGACATCTCAAAGC 57.088 42.857 0.00 0.00 0.00 3.51
3802 4797 1.874872 CGAGGGCGTTACAAGGAAAAA 59.125 47.619 0.00 0.00 0.00 1.94
3803 4798 1.070445 TCGAGGGCGTTACAAGGAAAA 59.930 47.619 0.00 0.00 38.98 2.29
3804 4799 0.680618 TCGAGGGCGTTACAAGGAAA 59.319 50.000 0.00 0.00 38.98 3.13
3805 4800 0.899720 ATCGAGGGCGTTACAAGGAA 59.100 50.000 0.00 0.00 38.98 3.36
3806 4801 0.899720 AATCGAGGGCGTTACAAGGA 59.100 50.000 0.00 0.00 38.98 3.36
3807 4802 1.287425 GAATCGAGGGCGTTACAAGG 58.713 55.000 0.00 0.00 38.98 3.61
3808 4803 0.921347 CGAATCGAGGGCGTTACAAG 59.079 55.000 0.00 0.00 38.98 3.16
3809 4804 0.527113 TCGAATCGAGGGCGTTACAA 59.473 50.000 0.00 0.00 38.98 2.41
3810 4805 0.742505 ATCGAATCGAGGGCGTTACA 59.257 50.000 12.00 0.00 39.91 2.41
3811 4806 1.268896 TGATCGAATCGAGGGCGTTAC 60.269 52.381 12.00 0.00 39.91 2.50
3812 4807 1.026584 TGATCGAATCGAGGGCGTTA 58.973 50.000 12.00 0.00 39.91 3.18
3813 4808 0.174845 TTGATCGAATCGAGGGCGTT 59.825 50.000 12.00 0.00 39.91 4.84
3814 4809 0.249073 CTTGATCGAATCGAGGGCGT 60.249 55.000 12.00 0.00 39.91 5.68
3815 4810 1.552348 GCTTGATCGAATCGAGGGCG 61.552 60.000 12.00 1.21 39.91 6.13
3816 4811 0.530650 TGCTTGATCGAATCGAGGGC 60.531 55.000 12.00 12.19 39.91 5.19
3817 4812 1.495878 CTGCTTGATCGAATCGAGGG 58.504 55.000 12.00 2.39 39.91 4.30
3818 4813 1.495878 CCTGCTTGATCGAATCGAGG 58.504 55.000 12.00 0.73 39.91 4.63
3819 4814 1.495878 CCCTGCTTGATCGAATCGAG 58.504 55.000 12.00 0.00 39.91 4.04
3820 4815 0.104855 CCCCTGCTTGATCGAATCGA 59.895 55.000 8.12 8.12 41.13 3.59
3821 4816 0.104855 TCCCCTGCTTGATCGAATCG 59.895 55.000 0.00 0.00 0.00 3.34
3822 4817 2.149578 CATCCCCTGCTTGATCGAATC 58.850 52.381 0.00 0.00 0.00 2.52
3823 4818 1.202855 CCATCCCCTGCTTGATCGAAT 60.203 52.381 0.00 0.00 0.00 3.34
3824 4819 0.181114 CCATCCCCTGCTTGATCGAA 59.819 55.000 0.00 0.00 0.00 3.71
3825 4820 0.690744 TCCATCCCCTGCTTGATCGA 60.691 55.000 0.00 0.00 0.00 3.59
3826 4821 0.181114 TTCCATCCCCTGCTTGATCG 59.819 55.000 0.00 0.00 0.00 3.69
3827 4822 2.626743 CAATTCCATCCCCTGCTTGATC 59.373 50.000 0.00 0.00 0.00 2.92
3828 4823 2.674420 CAATTCCATCCCCTGCTTGAT 58.326 47.619 0.00 0.00 0.00 2.57
3829 4824 1.342275 CCAATTCCATCCCCTGCTTGA 60.342 52.381 0.00 0.00 0.00 3.02
3830 4825 1.117150 CCAATTCCATCCCCTGCTTG 58.883 55.000 0.00 0.00 0.00 4.01
3831 4826 0.031817 CCCAATTCCATCCCCTGCTT 60.032 55.000 0.00 0.00 0.00 3.91
3832 4827 1.622499 CCCAATTCCATCCCCTGCT 59.378 57.895 0.00 0.00 0.00 4.24
3833 4828 2.136229 GCCCAATTCCATCCCCTGC 61.136 63.158 0.00 0.00 0.00 4.85
3834 4829 0.757935 CAGCCCAATTCCATCCCCTG 60.758 60.000 0.00 0.00 0.00 4.45
3835 4830 1.622499 CAGCCCAATTCCATCCCCT 59.378 57.895 0.00 0.00 0.00 4.79
3836 4831 2.136229 GCAGCCCAATTCCATCCCC 61.136 63.158 0.00 0.00 0.00 4.81
3837 4832 2.492773 CGCAGCCCAATTCCATCCC 61.493 63.158 0.00 0.00 0.00 3.85
3838 4833 2.492773 CCGCAGCCCAATTCCATCC 61.493 63.158 0.00 0.00 0.00 3.51
3839 4834 3.122850 CCGCAGCCCAATTCCATC 58.877 61.111 0.00 0.00 0.00 3.51
3840 4835 3.149648 GCCGCAGCCCAATTCCAT 61.150 61.111 0.00 0.00 0.00 3.41
3841 4836 4.365111 AGCCGCAGCCCAATTCCA 62.365 61.111 0.00 0.00 41.25 3.53
3842 4837 3.521796 GAGCCGCAGCCCAATTCC 61.522 66.667 0.00 0.00 41.25 3.01
3843 4838 3.880846 CGAGCCGCAGCCCAATTC 61.881 66.667 0.00 0.00 41.25 2.17
3857 4852 4.711949 AGCAGCCCAACAGCCGAG 62.712 66.667 0.00 0.00 0.00 4.63
3860 4855 2.598394 TTCAGCAGCCCAACAGCC 60.598 61.111 0.00 0.00 0.00 4.85
3861 4856 2.960170 CTTCAGCAGCCCAACAGC 59.040 61.111 0.00 0.00 0.00 4.40
3862 4857 2.960170 GCTTCAGCAGCCCAACAG 59.040 61.111 0.00 0.00 43.65 3.16
3870 4865 1.824230 AGAGACCAGTAGCTTCAGCAG 59.176 52.381 0.75 0.00 45.16 4.24
3871 4866 1.930251 AGAGACCAGTAGCTTCAGCA 58.070 50.000 0.75 0.00 45.16 4.41
3872 4867 2.360801 CCTAGAGACCAGTAGCTTCAGC 59.639 54.545 0.00 0.00 42.49 4.26
3873 4868 2.360801 GCCTAGAGACCAGTAGCTTCAG 59.639 54.545 0.00 0.00 0.00 3.02
3874 4869 2.024846 AGCCTAGAGACCAGTAGCTTCA 60.025 50.000 0.00 0.00 0.00 3.02
3875 4870 2.360801 CAGCCTAGAGACCAGTAGCTTC 59.639 54.545 0.00 0.00 0.00 3.86
3876 4871 2.383855 CAGCCTAGAGACCAGTAGCTT 58.616 52.381 0.00 0.00 0.00 3.74
3877 4872 2.026905 GCAGCCTAGAGACCAGTAGCT 61.027 57.143 0.00 0.00 0.00 3.32
3878 4873 0.387565 GCAGCCTAGAGACCAGTAGC 59.612 60.000 0.00 0.00 0.00 3.58
3879 4874 0.665835 CGCAGCCTAGAGACCAGTAG 59.334 60.000 0.00 0.00 0.00 2.57
3880 4875 2.795165 CGCAGCCTAGAGACCAGTA 58.205 57.895 0.00 0.00 0.00 2.74
3881 4876 3.609703 CGCAGCCTAGAGACCAGT 58.390 61.111 0.00 0.00 0.00 4.00
3917 4912 8.450578 TTGCTCTTCTATTTCTGTTTGAAGAA 57.549 30.769 0.00 0.00 41.36 2.52
3918 4913 8.450578 TTTGCTCTTCTATTTCTGTTTGAAGA 57.549 30.769 0.00 0.00 40.20 2.87
3919 4914 9.688592 ATTTTGCTCTTCTATTTCTGTTTGAAG 57.311 29.630 0.00 0.00 35.89 3.02
3920 4915 9.683069 GATTTTGCTCTTCTATTTCTGTTTGAA 57.317 29.630 0.00 0.00 0.00 2.69
3921 4916 8.849168 TGATTTTGCTCTTCTATTTCTGTTTGA 58.151 29.630 0.00 0.00 0.00 2.69
3922 4917 8.909671 GTGATTTTGCTCTTCTATTTCTGTTTG 58.090 33.333 0.00 0.00 0.00 2.93
3923 4918 8.632679 TGTGATTTTGCTCTTCTATTTCTGTTT 58.367 29.630 0.00 0.00 0.00 2.83
3924 4919 8.169977 TGTGATTTTGCTCTTCTATTTCTGTT 57.830 30.769 0.00 0.00 0.00 3.16
3925 4920 7.663081 TCTGTGATTTTGCTCTTCTATTTCTGT 59.337 33.333 0.00 0.00 0.00 3.41
3926 4921 8.037382 TCTGTGATTTTGCTCTTCTATTTCTG 57.963 34.615 0.00 0.00 0.00 3.02
3927 4922 8.627208 TTCTGTGATTTTGCTCTTCTATTTCT 57.373 30.769 0.00 0.00 0.00 2.52
3928 4923 8.725148 TCTTCTGTGATTTTGCTCTTCTATTTC 58.275 33.333 0.00 0.00 0.00 2.17
3929 4924 8.627208 TCTTCTGTGATTTTGCTCTTCTATTT 57.373 30.769 0.00 0.00 0.00 1.40
3930 4925 8.627208 TTCTTCTGTGATTTTGCTCTTCTATT 57.373 30.769 0.00 0.00 0.00 1.73
3931 4926 8.804912 ATTCTTCTGTGATTTTGCTCTTCTAT 57.195 30.769 0.00 0.00 0.00 1.98
3932 4927 8.509690 CAATTCTTCTGTGATTTTGCTCTTCTA 58.490 33.333 0.00 0.00 0.00 2.10
3933 4928 7.368833 CAATTCTTCTGTGATTTTGCTCTTCT 58.631 34.615 0.00 0.00 0.00 2.85
3934 4929 6.585322 CCAATTCTTCTGTGATTTTGCTCTTC 59.415 38.462 0.00 0.00 0.00 2.87
3935 4930 6.266103 TCCAATTCTTCTGTGATTTTGCTCTT 59.734 34.615 0.00 0.00 0.00 2.85
3936 4931 5.771666 TCCAATTCTTCTGTGATTTTGCTCT 59.228 36.000 0.00 0.00 0.00 4.09
3937 4932 6.017400 TCCAATTCTTCTGTGATTTTGCTC 57.983 37.500 0.00 0.00 0.00 4.26
3938 4933 5.771666 TCTCCAATTCTTCTGTGATTTTGCT 59.228 36.000 0.00 0.00 0.00 3.91
3939 4934 6.017400 TCTCCAATTCTTCTGTGATTTTGC 57.983 37.500 0.00 0.00 0.00 3.68
3940 4935 6.349944 CCCTCTCCAATTCTTCTGTGATTTTG 60.350 42.308 0.00 0.00 0.00 2.44
3941 4936 5.713861 CCCTCTCCAATTCTTCTGTGATTTT 59.286 40.000 0.00 0.00 0.00 1.82
3942 4937 5.222213 ACCCTCTCCAATTCTTCTGTGATTT 60.222 40.000 0.00 0.00 0.00 2.17
3943 4938 4.290722 ACCCTCTCCAATTCTTCTGTGATT 59.709 41.667 0.00 0.00 0.00 2.57
3944 4939 3.848975 ACCCTCTCCAATTCTTCTGTGAT 59.151 43.478 0.00 0.00 0.00 3.06
3945 4940 3.251484 ACCCTCTCCAATTCTTCTGTGA 58.749 45.455 0.00 0.00 0.00 3.58
3946 4941 3.710209 ACCCTCTCCAATTCTTCTGTG 57.290 47.619 0.00 0.00 0.00 3.66
3947 4942 3.395941 ACAACCCTCTCCAATTCTTCTGT 59.604 43.478 0.00 0.00 0.00 3.41
3948 4943 3.755378 CACAACCCTCTCCAATTCTTCTG 59.245 47.826 0.00 0.00 0.00 3.02
3949 4944 3.652869 TCACAACCCTCTCCAATTCTTCT 59.347 43.478 0.00 0.00 0.00 2.85
3950 4945 4.006319 CTCACAACCCTCTCCAATTCTTC 58.994 47.826 0.00 0.00 0.00 2.87
3951 4946 3.652869 TCTCACAACCCTCTCCAATTCTT 59.347 43.478 0.00 0.00 0.00 2.52
3952 4947 3.251484 TCTCACAACCCTCTCCAATTCT 58.749 45.455 0.00 0.00 0.00 2.40
3953 4948 3.261897 TCTCTCACAACCCTCTCCAATTC 59.738 47.826 0.00 0.00 0.00 2.17
3954 4949 3.251484 TCTCTCACAACCCTCTCCAATT 58.749 45.455 0.00 0.00 0.00 2.32
3955 4950 2.907892 TCTCTCACAACCCTCTCCAAT 58.092 47.619 0.00 0.00 0.00 3.16
3956 4951 2.398754 TCTCTCACAACCCTCTCCAA 57.601 50.000 0.00 0.00 0.00 3.53
3957 4952 2.630889 ATCTCTCACAACCCTCTCCA 57.369 50.000 0.00 0.00 0.00 3.86
3958 4953 4.219115 TCATATCTCTCACAACCCTCTCC 58.781 47.826 0.00 0.00 0.00 3.71
3959 4954 5.127845 TGTTCATATCTCTCACAACCCTCTC 59.872 44.000 0.00 0.00 0.00 3.20
3960 4955 5.026121 TGTTCATATCTCTCACAACCCTCT 58.974 41.667 0.00 0.00 0.00 3.69
3961 4956 5.344743 TGTTCATATCTCTCACAACCCTC 57.655 43.478 0.00 0.00 0.00 4.30
3962 4957 5.965033 ATGTTCATATCTCTCACAACCCT 57.035 39.130 0.00 0.00 0.00 4.34
3963 4958 6.876257 GGATATGTTCATATCTCTCACAACCC 59.124 42.308 23.34 7.84 34.72 4.11
3964 4959 7.445121 TGGATATGTTCATATCTCTCACAACC 58.555 38.462 23.34 11.17 34.72 3.77
3965 4960 8.933807 CATGGATATGTTCATATCTCTCACAAC 58.066 37.037 23.34 11.08 34.72 3.32
3966 4961 8.098912 CCATGGATATGTTCATATCTCTCACAA 58.901 37.037 23.34 8.74 34.72 3.33
3967 4962 7.455638 TCCATGGATATGTTCATATCTCTCACA 59.544 37.037 23.34 16.18 34.72 3.58
3968 4963 7.845037 TCCATGGATATGTTCATATCTCTCAC 58.155 38.462 23.34 12.57 34.72 3.51
3969 4964 7.677319 ACTCCATGGATATGTTCATATCTCTCA 59.323 37.037 16.63 16.68 34.72 3.27
3970 4965 8.076910 ACTCCATGGATATGTTCATATCTCTC 57.923 38.462 16.63 13.08 34.72 3.20
3971 4966 7.125507 GGACTCCATGGATATGTTCATATCTCT 59.874 40.741 16.63 13.37 34.72 3.10
3972 4967 7.093156 TGGACTCCATGGATATGTTCATATCTC 60.093 40.741 16.63 16.85 34.72 2.75
3973 4968 6.732390 TGGACTCCATGGATATGTTCATATCT 59.268 38.462 16.63 9.49 34.72 1.98
3974 4969 6.950842 TGGACTCCATGGATATGTTCATATC 58.049 40.000 16.63 18.90 33.80 1.63
3975 4970 6.069789 CCTGGACTCCATGGATATGTTCATAT 60.070 42.308 16.63 5.17 30.82 1.78
3976 4971 5.249163 CCTGGACTCCATGGATATGTTCATA 59.751 44.000 16.63 0.00 30.82 2.15
3977 4972 4.042560 CCTGGACTCCATGGATATGTTCAT 59.957 45.833 16.63 0.00 30.82 2.57
3978 4973 3.392285 CCTGGACTCCATGGATATGTTCA 59.608 47.826 16.63 13.80 30.82 3.18
3979 4974 3.648067 TCCTGGACTCCATGGATATGTTC 59.352 47.826 16.63 9.48 30.82 3.18
3980 4975 3.668821 TCCTGGACTCCATGGATATGTT 58.331 45.455 16.63 0.00 30.82 2.71
3981 4976 3.350992 TCCTGGACTCCATGGATATGT 57.649 47.619 16.63 10.14 30.82 2.29
3982 4977 4.923516 AATCCTGGACTCCATGGATATG 57.076 45.455 16.63 6.40 39.13 1.78
3983 4978 5.937492 AAAATCCTGGACTCCATGGATAT 57.063 39.130 16.63 6.63 39.13 1.63
3984 4979 5.448654 CAAAAATCCTGGACTCCATGGATA 58.551 41.667 16.63 1.42 39.13 2.59
3985 4980 4.284178 CAAAAATCCTGGACTCCATGGAT 58.716 43.478 16.63 17.24 40.57 3.41
3986 4981 3.700538 CAAAAATCCTGGACTCCATGGA 58.299 45.455 15.27 15.27 36.08 3.41
3987 4982 2.167075 GCAAAAATCCTGGACTCCATGG 59.833 50.000 4.97 4.97 30.82 3.66
3988 4983 2.827322 TGCAAAAATCCTGGACTCCATG 59.173 45.455 0.00 0.00 30.82 3.66
3989 4984 3.094572 CTGCAAAAATCCTGGACTCCAT 58.905 45.455 0.00 0.00 30.82 3.41
3990 4985 2.108075 TCTGCAAAAATCCTGGACTCCA 59.892 45.455 0.00 0.00 0.00 3.86
3991 4986 2.795329 TCTGCAAAAATCCTGGACTCC 58.205 47.619 0.00 0.00 0.00 3.85
3992 4987 5.397142 AATTCTGCAAAAATCCTGGACTC 57.603 39.130 0.00 0.00 0.00 3.36
3993 4988 5.305128 TCAAATTCTGCAAAAATCCTGGACT 59.695 36.000 0.00 0.00 0.00 3.85
3994 4989 5.406477 GTCAAATTCTGCAAAAATCCTGGAC 59.594 40.000 0.00 0.00 0.00 4.02
3995 4990 5.305128 AGTCAAATTCTGCAAAAATCCTGGA 59.695 36.000 0.00 0.00 0.00 3.86
3996 4991 5.544650 AGTCAAATTCTGCAAAAATCCTGG 58.455 37.500 0.00 0.00 0.00 4.45
3997 4992 8.592105 TTTAGTCAAATTCTGCAAAAATCCTG 57.408 30.769 0.00 0.00 0.00 3.86
3998 4993 9.783081 AATTTAGTCAAATTCTGCAAAAATCCT 57.217 25.926 0.00 0.00 39.63 3.24
4005 5000 9.044150 CCAAAGAAATTTAGTCAAATTCTGCAA 57.956 29.630 0.00 0.00 42.29 4.08
4006 5001 7.656948 CCCAAAGAAATTTAGTCAAATTCTGCA 59.343 33.333 0.00 0.00 42.29 4.41
4007 5002 7.360353 GCCCAAAGAAATTTAGTCAAATTCTGC 60.360 37.037 0.00 0.00 42.29 4.26
4008 5003 7.656948 TGCCCAAAGAAATTTAGTCAAATTCTG 59.343 33.333 0.00 0.00 42.29 3.02
4009 5004 7.734942 TGCCCAAAGAAATTTAGTCAAATTCT 58.265 30.769 0.00 0.00 42.29 2.40
4010 5005 7.961325 TGCCCAAAGAAATTTAGTCAAATTC 57.039 32.000 0.00 0.00 42.29 2.17
4011 5006 8.922931 AATGCCCAAAGAAATTTAGTCAAATT 57.077 26.923 0.00 0.00 44.45 1.82
4012 5007 8.922931 AAATGCCCAAAGAAATTTAGTCAAAT 57.077 26.923 0.00 0.00 35.84 2.32
4013 5008 8.744568 AAAATGCCCAAAGAAATTTAGTCAAA 57.255 26.923 0.00 0.00 0.00 2.69
4014 5009 8.744568 AAAAATGCCCAAAGAAATTTAGTCAA 57.255 26.923 0.00 0.00 0.00 3.18
4015 5010 9.487790 CTAAAAATGCCCAAAGAAATTTAGTCA 57.512 29.630 0.00 0.00 0.00 3.41
4016 5011 9.705290 TCTAAAAATGCCCAAAGAAATTTAGTC 57.295 29.630 0.00 0.00 33.22 2.59
4017 5012 9.710900 CTCTAAAAATGCCCAAAGAAATTTAGT 57.289 29.630 0.00 0.00 33.22 2.24
4018 5013 9.154847 CCTCTAAAAATGCCCAAAGAAATTTAG 57.845 33.333 0.00 0.00 32.90 1.85
4019 5014 8.655901 ACCTCTAAAAATGCCCAAAGAAATTTA 58.344 29.630 0.00 0.00 0.00 1.40
4020 5015 7.517320 ACCTCTAAAAATGCCCAAAGAAATTT 58.483 30.769 0.00 0.00 0.00 1.82
4021 5016 7.078249 ACCTCTAAAAATGCCCAAAGAAATT 57.922 32.000 0.00 0.00 0.00 1.82
4022 5017 6.686484 ACCTCTAAAAATGCCCAAAGAAAT 57.314 33.333 0.00 0.00 0.00 2.17
4023 5018 7.007723 TCTACCTCTAAAAATGCCCAAAGAAA 58.992 34.615 0.00 0.00 0.00 2.52
4024 5019 6.548321 TCTACCTCTAAAAATGCCCAAAGAA 58.452 36.000 0.00 0.00 0.00 2.52
4025 5020 6.134535 TCTACCTCTAAAAATGCCCAAAGA 57.865 37.500 0.00 0.00 0.00 2.52
4026 5021 6.834168 TTCTACCTCTAAAAATGCCCAAAG 57.166 37.500 0.00 0.00 0.00 2.77
4027 5022 7.604657 TTTTCTACCTCTAAAAATGCCCAAA 57.395 32.000 0.00 0.00 0.00 3.28
4028 5023 7.604657 TTTTTCTACCTCTAAAAATGCCCAA 57.395 32.000 0.00 0.00 31.46 4.12
4029 5024 7.790782 ATTTTTCTACCTCTAAAAATGCCCA 57.209 32.000 0.00 0.00 41.41 5.36
4040 5035 9.807921 TCAAACTTGGATTATTTTTCTACCTCT 57.192 29.630 0.00 0.00 0.00 3.69
4068 5063 9.743057 CAACTCATCACCAAAATTACACTTTAA 57.257 29.630 0.00 0.00 0.00 1.52
4069 5064 8.356657 CCAACTCATCACCAAAATTACACTTTA 58.643 33.333 0.00 0.00 0.00 1.85
4070 5065 7.069331 TCCAACTCATCACCAAAATTACACTTT 59.931 33.333 0.00 0.00 0.00 2.66
4071 5066 6.549364 TCCAACTCATCACCAAAATTACACTT 59.451 34.615 0.00 0.00 0.00 3.16
4072 5067 6.068010 TCCAACTCATCACCAAAATTACACT 58.932 36.000 0.00 0.00 0.00 3.55
4073 5068 6.325919 TCCAACTCATCACCAAAATTACAC 57.674 37.500 0.00 0.00 0.00 2.90
4074 5069 7.015098 ACAATCCAACTCATCACCAAAATTACA 59.985 33.333 0.00 0.00 0.00 2.41
4075 5070 7.329226 CACAATCCAACTCATCACCAAAATTAC 59.671 37.037 0.00 0.00 0.00 1.89
4076 5071 7.015098 ACACAATCCAACTCATCACCAAAATTA 59.985 33.333 0.00 0.00 0.00 1.40
4077 5072 6.183360 ACACAATCCAACTCATCACCAAAATT 60.183 34.615 0.00 0.00 0.00 1.82
4078 5073 5.305128 ACACAATCCAACTCATCACCAAAAT 59.695 36.000 0.00 0.00 0.00 1.82
4079 5074 4.648762 ACACAATCCAACTCATCACCAAAA 59.351 37.500 0.00 0.00 0.00 2.44
4080 5075 4.037803 CACACAATCCAACTCATCACCAAA 59.962 41.667 0.00 0.00 0.00 3.28
4081 5076 3.569277 CACACAATCCAACTCATCACCAA 59.431 43.478 0.00 0.00 0.00 3.67
4082 5077 3.148412 CACACAATCCAACTCATCACCA 58.852 45.455 0.00 0.00 0.00 4.17
4083 5078 2.489329 CCACACAATCCAACTCATCACC 59.511 50.000 0.00 0.00 0.00 4.02
4084 5079 3.411446 TCCACACAATCCAACTCATCAC 58.589 45.455 0.00 0.00 0.00 3.06
4085 5080 3.786368 TCCACACAATCCAACTCATCA 57.214 42.857 0.00 0.00 0.00 3.07
4086 5081 5.183713 TCAATTCCACACAATCCAACTCATC 59.816 40.000 0.00 0.00 0.00 2.92
4087 5082 5.078949 TCAATTCCACACAATCCAACTCAT 58.921 37.500 0.00 0.00 0.00 2.90
4088 5083 4.468713 TCAATTCCACACAATCCAACTCA 58.531 39.130 0.00 0.00 0.00 3.41
4089 5084 5.649782 ATCAATTCCACACAATCCAACTC 57.350 39.130 0.00 0.00 0.00 3.01
4090 5085 5.539574 TCAATCAATTCCACACAATCCAACT 59.460 36.000 0.00 0.00 0.00 3.16
4091 5086 5.634859 GTCAATCAATTCCACACAATCCAAC 59.365 40.000 0.00 0.00 0.00 3.77
4092 5087 5.279406 GGTCAATCAATTCCACACAATCCAA 60.279 40.000 0.00 0.00 0.00 3.53
4093 5088 4.220382 GGTCAATCAATTCCACACAATCCA 59.780 41.667 0.00 0.00 0.00 3.41
4094 5089 4.463891 AGGTCAATCAATTCCACACAATCC 59.536 41.667 0.00 0.00 0.00 3.01
4095 5090 5.416952 AGAGGTCAATCAATTCCACACAATC 59.583 40.000 0.00 0.00 0.00 2.67
4096 5091 5.327732 AGAGGTCAATCAATTCCACACAAT 58.672 37.500 0.00 0.00 0.00 2.71
4097 5092 4.728772 AGAGGTCAATCAATTCCACACAA 58.271 39.130 0.00 0.00 0.00 3.33
4098 5093 4.371624 AGAGGTCAATCAATTCCACACA 57.628 40.909 0.00 0.00 0.00 3.72
4099 5094 7.396540 AAATAGAGGTCAATCAATTCCACAC 57.603 36.000 0.00 0.00 0.00 3.82
4100 5095 7.093814 CCAAAATAGAGGTCAATCAATTCCACA 60.094 37.037 0.00 0.00 0.00 4.17
4101 5096 7.260603 CCAAAATAGAGGTCAATCAATTCCAC 58.739 38.462 0.00 0.00 0.00 4.02
4102 5097 6.380846 CCCAAAATAGAGGTCAATCAATTCCA 59.619 38.462 0.00 0.00 0.00 3.53
4103 5098 6.381133 ACCCAAAATAGAGGTCAATCAATTCC 59.619 38.462 0.00 0.00 0.00 3.01
4104 5099 7.410120 ACCCAAAATAGAGGTCAATCAATTC 57.590 36.000 0.00 0.00 0.00 2.17
4114 5109 4.993705 TCAACTGACCCAAAATAGAGGT 57.006 40.909 0.00 0.00 36.31 3.85
4115 5110 6.624423 CAATTCAACTGACCCAAAATAGAGG 58.376 40.000 0.00 0.00 0.00 3.69
4116 5111 6.071728 AGCAATTCAACTGACCCAAAATAGAG 60.072 38.462 0.00 0.00 0.00 2.43
4117 5112 5.774690 AGCAATTCAACTGACCCAAAATAGA 59.225 36.000 0.00 0.00 0.00 1.98
4118 5113 6.029346 AGCAATTCAACTGACCCAAAATAG 57.971 37.500 0.00 0.00 0.00 1.73
4119 5114 6.267471 AGAAGCAATTCAACTGACCCAAAATA 59.733 34.615 0.00 0.00 0.00 1.40
4120 5115 4.961438 AGCAATTCAACTGACCCAAAAT 57.039 36.364 0.00 0.00 0.00 1.82
4121 5116 4.405358 AGAAGCAATTCAACTGACCCAAAA 59.595 37.500 0.00 0.00 0.00 2.44
4122 5117 3.960102 AGAAGCAATTCAACTGACCCAAA 59.040 39.130 0.00 0.00 0.00 3.28
4123 5118 3.565307 AGAAGCAATTCAACTGACCCAA 58.435 40.909 0.00 0.00 0.00 4.12
4124 5119 3.228188 AGAAGCAATTCAACTGACCCA 57.772 42.857 0.00 0.00 0.00 4.51
4125 5120 3.305608 CCAAGAAGCAATTCAACTGACCC 60.306 47.826 0.00 0.00 0.00 4.46
4126 5121 3.305608 CCCAAGAAGCAATTCAACTGACC 60.306 47.826 0.00 0.00 0.00 4.02
4127 5122 3.858503 GCCCAAGAAGCAATTCAACTGAC 60.859 47.826 0.00 0.00 0.00 3.51
4128 5123 2.297033 GCCCAAGAAGCAATTCAACTGA 59.703 45.455 0.00 0.00 0.00 3.41
4129 5124 2.298163 AGCCCAAGAAGCAATTCAACTG 59.702 45.455 0.00 0.00 0.00 3.16
4130 5125 2.560105 GAGCCCAAGAAGCAATTCAACT 59.440 45.455 0.00 0.00 0.00 3.16
4131 5126 2.560105 AGAGCCCAAGAAGCAATTCAAC 59.440 45.455 0.00 0.00 0.00 3.18
4132 5127 2.880443 AGAGCCCAAGAAGCAATTCAA 58.120 42.857 0.00 0.00 0.00 2.69
4133 5128 2.592102 AGAGCCCAAGAAGCAATTCA 57.408 45.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.