Multiple sequence alignment - TraesCS7A01G317300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G317300 chr7A 100.000 2261 0 0 1 2261 456264790 456262530 0.000000e+00 4176
1 TraesCS7A01G317300 chr7A 87.261 1256 115 17 530 1767 589765612 589764384 0.000000e+00 1391
2 TraesCS7A01G317300 chr4A 88.498 1252 128 7 530 1767 16992039 16993288 0.000000e+00 1500
3 TraesCS7A01G317300 chr4A 90.909 220 20 0 1 220 503581195 503581414 1.700000e-76 296
4 TraesCS7A01G317300 chr2A 88.287 1255 125 12 530 1767 3767953 3766704 0.000000e+00 1483
5 TraesCS7A01G317300 chr2A 88.240 1250 119 11 530 1761 766841629 766842868 0.000000e+00 1469
6 TraesCS7A01G317300 chr6B 88.188 1253 130 9 530 1767 479298066 479299315 0.000000e+00 1478
7 TraesCS7A01G317300 chr6B 90.807 533 41 7 1 528 543135928 543135399 0.000000e+00 706
8 TraesCS7A01G317300 chr5D 88.070 1249 129 6 530 1767 26676143 26677382 0.000000e+00 1463
9 TraesCS7A01G317300 chr3D 87.905 1265 117 15 530 1774 104034337 104035585 0.000000e+00 1456
10 TraesCS7A01G317300 chr1A 87.500 1256 112 17 530 1767 556820741 556819513 0.000000e+00 1408
11 TraesCS7A01G317300 chr1A 87.182 1256 116 17 530 1767 556833347 556834575 0.000000e+00 1386
12 TraesCS7A01G317300 chr1A 87.122 1258 114 19 530 1769 553064593 553065820 0.000000e+00 1382
13 TraesCS7A01G317300 chr1A 86.783 1256 115 19 530 1767 555944915 555943693 0.000000e+00 1352
14 TraesCS7A01G317300 chr1A 88.533 968 96 6 530 1484 8024803 8025768 0.000000e+00 1158
15 TraesCS7A01G317300 chr6A 88.272 1117 109 12 668 1767 561235519 561236630 0.000000e+00 1317
16 TraesCS7A01G317300 chr6A 88.126 539 58 4 1233 1767 40741963 40741427 8.810000e-179 636
17 TraesCS7A01G317300 chr6A 87.455 550 61 4 1222 1767 58609179 58609724 5.300000e-176 627
18 TraesCS7A01G317300 chr6A 85.860 587 70 5 1188 1767 29631370 29630790 1.480000e-171 612
19 TraesCS7A01G317300 chr2B 89.000 700 69 4 1075 1767 175424413 175423715 0.000000e+00 859
20 TraesCS7A01G317300 chr4D 91.714 531 39 4 1 526 85311810 85312340 0.000000e+00 732
21 TraesCS7A01G317300 chr4D 92.891 211 12 3 1 209 62808928 62809137 1.010000e-78 303
22 TraesCS7A01G317300 chr7B 91.667 528 41 2 1 525 487531695 487531168 0.000000e+00 728
23 TraesCS7A01G317300 chr7B 90.341 528 48 2 1 525 487680478 487679951 0.000000e+00 689
24 TraesCS7A01G317300 chr1D 90.789 532 40 7 1 525 109952038 109951509 0.000000e+00 702
25 TraesCS7A01G317300 chr1D 94.444 342 18 1 189 529 221780581 221780240 1.990000e-145 525
26 TraesCS7A01G317300 chr1D 81.481 189 30 4 1325 1511 59104759 59104574 1.400000e-32 150
27 TraesCS7A01G317300 chr1B 88.694 513 51 5 1260 1767 373111585 373111075 8.870000e-174 619
28 TraesCS7A01G317300 chr3A 95.280 339 14 2 189 526 369408191 369408528 9.190000e-149 536
29 TraesCS7A01G317300 chr3A 75.062 405 95 4 1769 2167 552530565 552530161 1.380000e-42 183
30 TraesCS7A01G317300 chr2D 95.000 340 15 2 189 526 155341996 155341657 1.190000e-147 532
31 TraesCS7A01G317300 chr2D 97.354 189 5 0 1 189 419723392 419723204 2.800000e-84 322
32 TraesCS7A01G317300 chr7D 94.152 342 19 1 189 529 440967326 440966985 9.260000e-144 520
33 TraesCS7A01G317300 chr7D 84.146 492 49 11 1193 1678 236674413 236674881 1.230000e-122 449
34 TraesCS7A01G317300 chr7D 88.095 336 36 3 1435 1767 177093234 177092900 1.630000e-106 396
35 TraesCS7A01G317300 chr7D 87.179 312 29 8 1465 1767 546624829 546624520 5.980000e-91 344
36 TraesCS7A01G317300 chr3B 95.876 194 8 0 1 194 184102969 184102776 4.690000e-82 315
37 TraesCS7A01G317300 chr3B 75.066 381 92 3 1789 2168 422512286 422511908 8.300000e-40 174


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G317300 chr7A 456262530 456264790 2260 True 4176 4176 100.000 1 2261 1 chr7A.!!$R1 2260
1 TraesCS7A01G317300 chr7A 589764384 589765612 1228 True 1391 1391 87.261 530 1767 1 chr7A.!!$R2 1237
2 TraesCS7A01G317300 chr4A 16992039 16993288 1249 False 1500 1500 88.498 530 1767 1 chr4A.!!$F1 1237
3 TraesCS7A01G317300 chr2A 3766704 3767953 1249 True 1483 1483 88.287 530 1767 1 chr2A.!!$R1 1237
4 TraesCS7A01G317300 chr2A 766841629 766842868 1239 False 1469 1469 88.240 530 1761 1 chr2A.!!$F1 1231
5 TraesCS7A01G317300 chr6B 479298066 479299315 1249 False 1478 1478 88.188 530 1767 1 chr6B.!!$F1 1237
6 TraesCS7A01G317300 chr6B 543135399 543135928 529 True 706 706 90.807 1 528 1 chr6B.!!$R1 527
7 TraesCS7A01G317300 chr5D 26676143 26677382 1239 False 1463 1463 88.070 530 1767 1 chr5D.!!$F1 1237
8 TraesCS7A01G317300 chr3D 104034337 104035585 1248 False 1456 1456 87.905 530 1774 1 chr3D.!!$F1 1244
9 TraesCS7A01G317300 chr1A 556819513 556820741 1228 True 1408 1408 87.500 530 1767 1 chr1A.!!$R2 1237
10 TraesCS7A01G317300 chr1A 556833347 556834575 1228 False 1386 1386 87.182 530 1767 1 chr1A.!!$F3 1237
11 TraesCS7A01G317300 chr1A 553064593 553065820 1227 False 1382 1382 87.122 530 1769 1 chr1A.!!$F2 1239
12 TraesCS7A01G317300 chr1A 555943693 555944915 1222 True 1352 1352 86.783 530 1767 1 chr1A.!!$R1 1237
13 TraesCS7A01G317300 chr1A 8024803 8025768 965 False 1158 1158 88.533 530 1484 1 chr1A.!!$F1 954
14 TraesCS7A01G317300 chr6A 561235519 561236630 1111 False 1317 1317 88.272 668 1767 1 chr6A.!!$F2 1099
15 TraesCS7A01G317300 chr6A 40741427 40741963 536 True 636 636 88.126 1233 1767 1 chr6A.!!$R2 534
16 TraesCS7A01G317300 chr6A 58609179 58609724 545 False 627 627 87.455 1222 1767 1 chr6A.!!$F1 545
17 TraesCS7A01G317300 chr6A 29630790 29631370 580 True 612 612 85.860 1188 1767 1 chr6A.!!$R1 579
18 TraesCS7A01G317300 chr2B 175423715 175424413 698 True 859 859 89.000 1075 1767 1 chr2B.!!$R1 692
19 TraesCS7A01G317300 chr4D 85311810 85312340 530 False 732 732 91.714 1 526 1 chr4D.!!$F2 525
20 TraesCS7A01G317300 chr7B 487531168 487531695 527 True 728 728 91.667 1 525 1 chr7B.!!$R1 524
21 TraesCS7A01G317300 chr7B 487679951 487680478 527 True 689 689 90.341 1 525 1 chr7B.!!$R2 524
22 TraesCS7A01G317300 chr1D 109951509 109952038 529 True 702 702 90.789 1 525 1 chr1D.!!$R2 524
23 TraesCS7A01G317300 chr1B 373111075 373111585 510 True 619 619 88.694 1260 1767 1 chr1B.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 77 1.092345 GGCATTCTCCCTCTTCGTGC 61.092 60.0 0.0 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 2083 0.034198 TGCTAACAGCGGCAACACTA 59.966 50.0 1.45 0.0 46.26 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.866870 AGGTCTCTAATATTTGCTCCTTTTCT 58.133 34.615 0.00 0.00 0.00 2.52
44 45 2.200081 TGCTCCTTTTCTAGCCCAGAT 58.800 47.619 0.00 0.00 37.97 2.90
51 52 4.568592 CCTTTTCTAGCCCAGATTTCCAGT 60.569 45.833 0.00 0.00 31.77 4.00
72 73 1.227380 CCGGCATTCTCCCTCTTCG 60.227 63.158 0.00 0.00 0.00 3.79
75 77 1.092345 GGCATTCTCCCTCTTCGTGC 61.092 60.000 0.00 0.00 0.00 5.34
94 96 7.209471 TCGTGCAAACCTTGTAAAATAAGAT 57.791 32.000 0.00 0.00 0.00 2.40
255 260 2.531771 TCGTGGGTTGAAGTCTCCATA 58.468 47.619 0.00 0.00 0.00 2.74
346 354 3.576861 CTTCTCCAAACCCTTCCCTTTT 58.423 45.455 0.00 0.00 0.00 2.27
361 369 6.550854 CCTTCCCTTTTCCTTCATATGCAATA 59.449 38.462 0.00 0.00 0.00 1.90
362 371 6.959639 TCCCTTTTCCTTCATATGCAATAC 57.040 37.500 0.00 0.00 0.00 1.89
376 385 5.811399 ATGCAATACTTTACTTTGCGCTA 57.189 34.783 9.73 0.00 46.70 4.26
399 408 7.921214 GCTACTACACTCTTAGAATTGCATGTA 59.079 37.037 0.00 0.00 0.00 2.29
439 448 7.013274 TGACTTGTGCTAAGTTGCTAAAATCTT 59.987 33.333 8.07 0.00 0.00 2.40
470 479 8.067751 ACTTAAAATTGGGAAAAGGCTAGATC 57.932 34.615 0.00 0.00 0.00 2.75
526 537 7.114754 TCTAGACCTACTTTCGATCCTACAAA 58.885 38.462 0.00 0.00 0.00 2.83
527 538 6.793505 AGACCTACTTTCGATCCTACAAAT 57.206 37.500 0.00 0.00 0.00 2.32
528 539 6.574350 AGACCTACTTTCGATCCTACAAATG 58.426 40.000 0.00 0.00 0.00 2.32
558 569 4.236935 CAACAAATTGAAGGCGTAATGCT 58.763 39.130 0.00 0.00 40.12 3.79
607 618 7.472334 AGGATTTGCATCTTGTTTGACTATT 57.528 32.000 0.00 0.00 0.00 1.73
626 637 7.232534 TGACTATTACCAAAGGTCTTGCAATTT 59.767 33.333 0.00 0.00 37.09 1.82
642 653 6.252967 TGCAATTTATATGGGCATAGAACG 57.747 37.500 0.00 0.00 0.00 3.95
653 664 4.074970 GGGCATAGAACGATCATTTCCAT 58.925 43.478 0.00 0.00 0.00 3.41
656 667 6.128172 GGGCATAGAACGATCATTTCCATTAG 60.128 42.308 0.00 0.00 0.00 1.73
657 668 6.310197 GCATAGAACGATCATTTCCATTAGC 58.690 40.000 0.00 0.00 0.00 3.09
724 735 6.763135 TCGATACAGAAATGCTAAAAGCTGAT 59.237 34.615 0.00 0.00 42.97 2.90
744 755 6.961554 GCTGATAAGGTGTTCGAAGTTAATTG 59.038 38.462 0.00 0.00 0.00 2.32
752 763 7.390718 AGGTGTTCGAAGTTAATTGCTTCTTAT 59.609 33.333 16.96 1.39 39.94 1.73
766 777 9.807649 AATTGCTTCTTATTTGTGGTTGATATC 57.192 29.630 0.00 0.00 0.00 1.63
775 786 2.746904 TGTGGTTGATATCGCAAAGGTG 59.253 45.455 0.00 0.00 0.00 4.00
781 792 5.348986 GTTGATATCGCAAAGGTGTCTCTA 58.651 41.667 0.00 0.00 0.00 2.43
782 793 5.791336 TGATATCGCAAAGGTGTCTCTAT 57.209 39.130 0.00 0.00 0.00 1.98
830 841 7.602753 AGTGTTCAAAAGTATATTTGGCTTCC 58.397 34.615 0.48 0.00 40.04 3.46
878 889 3.610040 TGGATGATGTTGAACTACGCT 57.390 42.857 0.00 0.00 0.00 5.07
899 916 8.354011 ACGCTATGCTAAGTTTATAGAAACAG 57.646 34.615 14.93 5.94 46.30 3.16
935 952 5.065218 GGTTCATGCGATGTTGAGTTAGATT 59.935 40.000 0.00 0.00 0.00 2.40
969 987 5.005740 TGAACTAAGACTGCTGCAAATGAT 58.994 37.500 3.02 0.00 0.00 2.45
975 993 5.972107 AGACTGCTGCAAATGATTTTACT 57.028 34.783 3.02 0.00 0.00 2.24
979 997 7.065563 AGACTGCTGCAAATGATTTTACTAGAG 59.934 37.037 3.02 0.00 0.00 2.43
1072 1091 8.925161 TTCAATTTCTTGTCGAATTTTGTTCT 57.075 26.923 0.00 0.00 33.87 3.01
1073 1092 8.925161 TCAATTTCTTGTCGAATTTTGTTCTT 57.075 26.923 0.00 0.00 33.87 2.52
1148 1167 8.635765 TTGCTAAAGAACTATTTGAGGTCAAT 57.364 30.769 0.00 0.00 45.32 2.57
1194 1213 9.632638 AATGGTCTTGCTACTTTATGTATTGAT 57.367 29.630 0.00 0.00 0.00 2.57
1254 1276 5.061560 CGATGACTTTGCTTCTAGAAGTGTC 59.938 44.000 28.72 26.66 40.45 3.67
1381 1403 0.321564 TGGAGTGAAGAACATGGCCG 60.322 55.000 0.00 0.00 0.00 6.13
1462 1488 5.539048 ACACAAACGATCTAAGTAGCAACT 58.461 37.500 0.00 0.00 37.65 3.16
1473 1499 7.801716 TCTAAGTAGCAACTTGTTTTGACAT 57.198 32.000 1.11 0.00 45.63 3.06
1507 1533 3.819368 TGCAGAACAAAATGAGGTCTCA 58.181 40.909 2.93 2.93 44.59 3.27
1551 1578 3.518634 TTTGTGGAAAGCGAGCTTTTT 57.481 38.095 21.93 3.20 45.16 1.94
1668 1718 8.243961 AGGCTATGCTATGTACTGGATATTAG 57.756 38.462 0.00 0.00 0.00 1.73
1730 1783 2.380590 ACAAGGGCCCCTTATTGTTGTA 59.619 45.455 21.43 0.00 42.67 2.41
1733 1786 4.346478 AGGGCCCCTTATTGTTGTATTT 57.654 40.909 21.43 0.00 0.00 1.40
1757 1810 4.047166 CCTTGGGCCCCATATATCTATGA 58.953 47.826 22.27 0.00 37.51 2.15
1769 1822 4.864483 ATATCTATGAGCCGACCCTAGA 57.136 45.455 0.00 0.00 0.00 2.43
1770 1823 3.748645 ATCTATGAGCCGACCCTAGAT 57.251 47.619 0.00 0.00 0.00 1.98
1771 1824 2.796557 TCTATGAGCCGACCCTAGATG 58.203 52.381 0.00 0.00 0.00 2.90
1772 1825 1.203523 CTATGAGCCGACCCTAGATGC 59.796 57.143 0.00 0.00 0.00 3.91
1773 1826 0.470833 ATGAGCCGACCCTAGATGCT 60.471 55.000 0.00 0.00 34.40 3.79
1774 1827 1.109920 TGAGCCGACCCTAGATGCTC 61.110 60.000 0.00 0.00 46.60 4.26
1775 1828 1.811645 GAGCCGACCCTAGATGCTCC 61.812 65.000 0.00 0.00 41.95 4.70
1776 1829 2.134287 GCCGACCCTAGATGCTCCA 61.134 63.158 0.00 0.00 0.00 3.86
1777 1830 1.742768 CCGACCCTAGATGCTCCAC 59.257 63.158 0.00 0.00 0.00 4.02
1778 1831 1.043116 CCGACCCTAGATGCTCCACA 61.043 60.000 0.00 0.00 0.00 4.17
1779 1832 0.103208 CGACCCTAGATGCTCCACAC 59.897 60.000 0.00 0.00 0.00 3.82
1780 1833 1.195115 GACCCTAGATGCTCCACACA 58.805 55.000 0.00 0.00 0.00 3.72
1781 1834 1.555075 GACCCTAGATGCTCCACACAA 59.445 52.381 0.00 0.00 0.00 3.33
1782 1835 1.985159 ACCCTAGATGCTCCACACAAA 59.015 47.619 0.00 0.00 0.00 2.83
1783 1836 2.578021 ACCCTAGATGCTCCACACAAAT 59.422 45.455 0.00 0.00 0.00 2.32
1784 1837 3.780294 ACCCTAGATGCTCCACACAAATA 59.220 43.478 0.00 0.00 0.00 1.40
1785 1838 4.141620 ACCCTAGATGCTCCACACAAATAG 60.142 45.833 0.00 0.00 0.00 1.73
1786 1839 4.101585 CCCTAGATGCTCCACACAAATAGA 59.898 45.833 0.00 0.00 0.00 1.98
1787 1840 5.295950 CCTAGATGCTCCACACAAATAGAG 58.704 45.833 0.00 0.00 0.00 2.43
1788 1841 5.069648 CCTAGATGCTCCACACAAATAGAGA 59.930 44.000 0.00 0.00 0.00 3.10
1789 1842 5.426689 AGATGCTCCACACAAATAGAGAA 57.573 39.130 0.00 0.00 0.00 2.87
1790 1843 5.809001 AGATGCTCCACACAAATAGAGAAA 58.191 37.500 0.00 0.00 0.00 2.52
1791 1844 6.240894 AGATGCTCCACACAAATAGAGAAAA 58.759 36.000 0.00 0.00 0.00 2.29
1792 1845 6.716628 AGATGCTCCACACAAATAGAGAAAAA 59.283 34.615 0.00 0.00 0.00 1.94
1793 1846 6.072112 TGCTCCACACAAATAGAGAAAAAC 57.928 37.500 0.00 0.00 0.00 2.43
1794 1847 5.592282 TGCTCCACACAAATAGAGAAAAACA 59.408 36.000 0.00 0.00 0.00 2.83
1795 1848 6.265196 TGCTCCACACAAATAGAGAAAAACAT 59.735 34.615 0.00 0.00 0.00 2.71
1796 1849 7.446931 TGCTCCACACAAATAGAGAAAAACATA 59.553 33.333 0.00 0.00 0.00 2.29
1797 1850 7.965107 GCTCCACACAAATAGAGAAAAACATAG 59.035 37.037 0.00 0.00 0.00 2.23
1798 1851 7.816640 TCCACACAAATAGAGAAAAACATAGC 58.183 34.615 0.00 0.00 0.00 2.97
1799 1852 7.665559 TCCACACAAATAGAGAAAAACATAGCT 59.334 33.333 0.00 0.00 0.00 3.32
1800 1853 8.946085 CCACACAAATAGAGAAAAACATAGCTA 58.054 33.333 0.00 0.00 0.00 3.32
1807 1860 6.410243 AGAGAAAAACATAGCTAAACTCGC 57.590 37.500 0.00 0.00 0.00 5.03
1808 1861 5.932303 AGAGAAAAACATAGCTAAACTCGCA 59.068 36.000 0.00 0.00 0.00 5.10
1809 1862 6.426937 AGAGAAAAACATAGCTAAACTCGCAA 59.573 34.615 0.00 0.00 0.00 4.85
1810 1863 6.371389 AGAAAAACATAGCTAAACTCGCAAC 58.629 36.000 0.00 0.00 0.00 4.17
1811 1864 4.680171 AAACATAGCTAAACTCGCAACC 57.320 40.909 0.00 0.00 0.00 3.77
1812 1865 2.629051 ACATAGCTAAACTCGCAACCC 58.371 47.619 0.00 0.00 0.00 4.11
1813 1866 2.236395 ACATAGCTAAACTCGCAACCCT 59.764 45.455 0.00 0.00 0.00 4.34
1814 1867 2.380084 TAGCTAAACTCGCAACCCTG 57.620 50.000 0.00 0.00 0.00 4.45
1815 1868 0.685097 AGCTAAACTCGCAACCCTGA 59.315 50.000 0.00 0.00 0.00 3.86
1816 1869 1.079503 GCTAAACTCGCAACCCTGAG 58.920 55.000 0.00 0.00 38.21 3.35
1817 1870 1.337823 GCTAAACTCGCAACCCTGAGA 60.338 52.381 0.00 0.00 36.11 3.27
1818 1871 2.870435 GCTAAACTCGCAACCCTGAGAA 60.870 50.000 0.00 0.00 36.11 2.87
1819 1872 1.884235 AAACTCGCAACCCTGAGAAG 58.116 50.000 0.00 0.00 36.11 2.85
1820 1873 0.759346 AACTCGCAACCCTGAGAAGT 59.241 50.000 0.00 0.00 36.11 3.01
1821 1874 1.629043 ACTCGCAACCCTGAGAAGTA 58.371 50.000 0.00 0.00 36.11 2.24
1822 1875 1.546476 ACTCGCAACCCTGAGAAGTAG 59.454 52.381 0.00 0.00 36.11 2.57
1823 1876 1.546476 CTCGCAACCCTGAGAAGTAGT 59.454 52.381 0.00 0.00 34.04 2.73
1824 1877 1.544691 TCGCAACCCTGAGAAGTAGTC 59.455 52.381 0.00 0.00 0.00 2.59
1825 1878 1.404315 CGCAACCCTGAGAAGTAGTCC 60.404 57.143 0.00 0.00 0.00 3.85
1826 1879 1.623811 GCAACCCTGAGAAGTAGTCCA 59.376 52.381 0.00 0.00 0.00 4.02
1827 1880 2.237392 GCAACCCTGAGAAGTAGTCCAT 59.763 50.000 0.00 0.00 0.00 3.41
1828 1881 3.451178 GCAACCCTGAGAAGTAGTCCATA 59.549 47.826 0.00 0.00 0.00 2.74
1829 1882 4.680975 GCAACCCTGAGAAGTAGTCCATAC 60.681 50.000 0.00 0.00 34.30 2.39
1830 1883 3.644335 ACCCTGAGAAGTAGTCCATACC 58.356 50.000 0.00 0.00 34.67 2.73
1831 1884 3.012502 ACCCTGAGAAGTAGTCCATACCA 59.987 47.826 0.00 0.00 34.67 3.25
1832 1885 4.030913 CCCTGAGAAGTAGTCCATACCAA 58.969 47.826 0.00 0.00 34.67 3.67
1833 1886 4.141914 CCCTGAGAAGTAGTCCATACCAAC 60.142 50.000 0.00 0.00 34.67 3.77
1834 1887 4.466370 CCTGAGAAGTAGTCCATACCAACA 59.534 45.833 0.00 0.00 34.67 3.33
1835 1888 5.046591 CCTGAGAAGTAGTCCATACCAACAA 60.047 44.000 0.00 0.00 34.67 2.83
1836 1889 6.352222 CCTGAGAAGTAGTCCATACCAACAAT 60.352 42.308 0.00 0.00 34.67 2.71
1837 1890 7.147724 CCTGAGAAGTAGTCCATACCAACAATA 60.148 40.741 0.00 0.00 34.67 1.90
1838 1891 7.782049 TGAGAAGTAGTCCATACCAACAATAG 58.218 38.462 0.00 0.00 34.67 1.73
1839 1892 7.618117 TGAGAAGTAGTCCATACCAACAATAGA 59.382 37.037 0.00 0.00 34.67 1.98
1840 1893 7.783042 AGAAGTAGTCCATACCAACAATAGAC 58.217 38.462 0.00 0.00 34.67 2.59
1841 1894 6.145338 AGTAGTCCATACCAACAATAGACG 57.855 41.667 0.00 0.00 34.67 4.18
1842 1895 5.889853 AGTAGTCCATACCAACAATAGACGA 59.110 40.000 0.00 0.00 34.67 4.20
1843 1896 5.007385 AGTCCATACCAACAATAGACGAC 57.993 43.478 0.00 0.00 0.00 4.34
1844 1897 4.117685 GTCCATACCAACAATAGACGACC 58.882 47.826 0.00 0.00 0.00 4.79
1845 1898 3.770388 TCCATACCAACAATAGACGACCA 59.230 43.478 0.00 0.00 0.00 4.02
1846 1899 4.223255 TCCATACCAACAATAGACGACCAA 59.777 41.667 0.00 0.00 0.00 3.67
1847 1900 4.938832 CCATACCAACAATAGACGACCAAA 59.061 41.667 0.00 0.00 0.00 3.28
1848 1901 5.413213 CCATACCAACAATAGACGACCAAAA 59.587 40.000 0.00 0.00 0.00 2.44
1849 1902 6.094881 CCATACCAACAATAGACGACCAAAAT 59.905 38.462 0.00 0.00 0.00 1.82
1850 1903 5.622770 ACCAACAATAGACGACCAAAATC 57.377 39.130 0.00 0.00 0.00 2.17
1851 1904 5.313712 ACCAACAATAGACGACCAAAATCT 58.686 37.500 0.00 0.00 0.00 2.40
1852 1905 5.411669 ACCAACAATAGACGACCAAAATCTC 59.588 40.000 0.00 0.00 0.00 2.75
1853 1906 5.643777 CCAACAATAGACGACCAAAATCTCT 59.356 40.000 0.00 0.00 0.00 3.10
1854 1907 6.816640 CCAACAATAGACGACCAAAATCTCTA 59.183 38.462 0.00 0.00 0.00 2.43
1855 1908 7.010552 CCAACAATAGACGACCAAAATCTCTAG 59.989 40.741 0.00 0.00 0.00 2.43
1856 1909 7.406031 ACAATAGACGACCAAAATCTCTAGA 57.594 36.000 0.00 0.00 0.00 2.43
1857 1910 8.012957 ACAATAGACGACCAAAATCTCTAGAT 57.987 34.615 0.00 0.00 36.07 1.98
1858 1911 8.138712 ACAATAGACGACCAAAATCTCTAGATC 58.861 37.037 0.00 0.00 32.75 2.75
1859 1912 5.523438 AGACGACCAAAATCTCTAGATCC 57.477 43.478 0.00 0.00 32.75 3.36
1860 1913 4.956700 AGACGACCAAAATCTCTAGATCCA 59.043 41.667 0.00 0.00 32.75 3.41
1861 1914 5.068460 AGACGACCAAAATCTCTAGATCCAG 59.932 44.000 0.00 0.00 32.75 3.86
1862 1915 4.956700 ACGACCAAAATCTCTAGATCCAGA 59.043 41.667 0.00 0.00 32.75 3.86
1863 1916 5.422331 ACGACCAAAATCTCTAGATCCAGAA 59.578 40.000 0.00 0.00 32.75 3.02
1864 1917 6.098982 ACGACCAAAATCTCTAGATCCAGAAT 59.901 38.462 0.00 0.00 32.75 2.40
1865 1918 6.644592 CGACCAAAATCTCTAGATCCAGAATC 59.355 42.308 0.00 0.00 32.75 2.52
1866 1919 7.443302 ACCAAAATCTCTAGATCCAGAATCA 57.557 36.000 0.00 0.00 36.79 2.57
1867 1920 7.865820 ACCAAAATCTCTAGATCCAGAATCAA 58.134 34.615 0.00 0.00 36.79 2.57
1868 1921 7.992033 ACCAAAATCTCTAGATCCAGAATCAAG 59.008 37.037 0.00 0.00 36.79 3.02
1869 1922 7.444792 CCAAAATCTCTAGATCCAGAATCAAGG 59.555 40.741 0.00 0.00 36.79 3.61
1870 1923 7.927683 AAATCTCTAGATCCAGAATCAAGGA 57.072 36.000 0.00 0.00 36.79 3.36
1871 1924 8.508969 AAATCTCTAGATCCAGAATCAAGGAT 57.491 34.615 6.91 6.91 46.98 3.24
1872 1925 6.914654 TCTCTAGATCCAGAATCAAGGATG 57.085 41.667 11.18 0.00 44.44 3.51
1873 1926 6.380414 TCTCTAGATCCAGAATCAAGGATGT 58.620 40.000 11.18 9.93 44.44 3.06
1874 1927 6.843333 TCTCTAGATCCAGAATCAAGGATGTT 59.157 38.462 11.18 3.75 44.44 2.71
1875 1928 6.824553 TCTAGATCCAGAATCAAGGATGTTG 58.175 40.000 11.18 8.77 44.44 3.33
1876 1929 5.447778 AGATCCAGAATCAAGGATGTTGT 57.552 39.130 11.18 0.00 44.44 3.32
1877 1930 5.435291 AGATCCAGAATCAAGGATGTTGTC 58.565 41.667 11.18 0.00 44.44 3.18
1878 1931 4.639078 TCCAGAATCAAGGATGTTGTCA 57.361 40.909 0.00 0.00 0.00 3.58
1879 1932 4.582869 TCCAGAATCAAGGATGTTGTCAG 58.417 43.478 0.00 0.00 0.00 3.51
1880 1933 4.042062 TCCAGAATCAAGGATGTTGTCAGT 59.958 41.667 0.00 0.00 0.00 3.41
1881 1934 5.248248 TCCAGAATCAAGGATGTTGTCAGTA 59.752 40.000 0.00 0.00 0.00 2.74
1882 1935 5.939883 CCAGAATCAAGGATGTTGTCAGTAA 59.060 40.000 0.00 0.00 0.00 2.24
1883 1936 6.430925 CCAGAATCAAGGATGTTGTCAGTAAA 59.569 38.462 0.00 0.00 0.00 2.01
1884 1937 7.301054 CAGAATCAAGGATGTTGTCAGTAAAC 58.699 38.462 0.00 0.00 0.00 2.01
1885 1938 6.998074 AGAATCAAGGATGTTGTCAGTAAACA 59.002 34.615 0.00 0.00 41.50 2.83
1886 1939 7.502226 AGAATCAAGGATGTTGTCAGTAAACAA 59.498 33.333 0.00 0.00 40.69 2.83
1887 1940 6.618287 TCAAGGATGTTGTCAGTAAACAAG 57.382 37.500 0.00 0.00 40.69 3.16
1888 1941 6.353323 TCAAGGATGTTGTCAGTAAACAAGA 58.647 36.000 0.00 0.00 40.69 3.02
1889 1942 6.998074 TCAAGGATGTTGTCAGTAAACAAGAT 59.002 34.615 0.00 0.00 43.49 2.40
1890 1943 6.808008 AGGATGTTGTCAGTAAACAAGATG 57.192 37.500 4.39 0.00 41.60 2.90
1891 1944 6.299141 AGGATGTTGTCAGTAAACAAGATGT 58.701 36.000 4.39 0.00 41.60 3.06
1892 1945 6.428159 AGGATGTTGTCAGTAAACAAGATGTC 59.572 38.462 4.39 0.00 41.60 3.06
1893 1946 6.204688 GGATGTTGTCAGTAAACAAGATGTCA 59.795 38.462 4.39 0.00 41.60 3.58
1894 1947 6.358118 TGTTGTCAGTAAACAAGATGTCAC 57.642 37.500 0.00 0.00 39.69 3.67
1895 1948 5.295787 TGTTGTCAGTAAACAAGATGTCACC 59.704 40.000 0.00 0.00 39.69 4.02
1896 1949 5.290493 TGTCAGTAAACAAGATGTCACCT 57.710 39.130 0.00 0.00 0.00 4.00
1897 1950 5.680619 TGTCAGTAAACAAGATGTCACCTT 58.319 37.500 0.00 0.00 0.00 3.50
1898 1951 5.758296 TGTCAGTAAACAAGATGTCACCTTC 59.242 40.000 0.00 0.00 0.00 3.46
1899 1952 5.758296 GTCAGTAAACAAGATGTCACCTTCA 59.242 40.000 0.00 0.00 0.00 3.02
1900 1953 6.428159 GTCAGTAAACAAGATGTCACCTTCAT 59.572 38.462 0.00 0.00 0.00 2.57
1901 1954 6.427853 TCAGTAAACAAGATGTCACCTTCATG 59.572 38.462 0.00 0.00 0.00 3.07
1902 1955 6.427853 CAGTAAACAAGATGTCACCTTCATGA 59.572 38.462 0.00 0.00 0.00 3.07
1903 1956 6.998074 AGTAAACAAGATGTCACCTTCATGAA 59.002 34.615 8.12 8.12 0.00 2.57
1904 1957 5.954296 AACAAGATGTCACCTTCATGAAG 57.046 39.130 25.75 25.75 38.14 3.02
1917 1970 3.251479 TCATGAAGGAGAATGACACCG 57.749 47.619 0.00 0.00 34.46 4.94
1918 1971 2.831526 TCATGAAGGAGAATGACACCGA 59.168 45.455 0.00 0.00 34.46 4.69
1919 1972 3.118992 TCATGAAGGAGAATGACACCGAG 60.119 47.826 0.00 0.00 34.46 4.63
1920 1973 2.525368 TGAAGGAGAATGACACCGAGA 58.475 47.619 0.00 0.00 34.46 4.04
1921 1974 3.099905 TGAAGGAGAATGACACCGAGAT 58.900 45.455 0.00 0.00 34.46 2.75
1922 1975 3.118992 TGAAGGAGAATGACACCGAGATG 60.119 47.826 0.00 0.00 34.46 2.90
1923 1976 2.461695 AGGAGAATGACACCGAGATGT 58.538 47.619 0.00 0.00 34.46 3.06
1929 1982 2.070861 GACACCGAGATGTCGTTGC 58.929 57.895 9.76 0.00 42.02 4.17
1930 1983 1.352156 GACACCGAGATGTCGTTGCC 61.352 60.000 9.76 0.00 42.02 4.52
1931 1984 2.126071 ACCGAGATGTCGTTGCCG 60.126 61.111 11.66 0.00 45.30 5.69
1932 1985 2.126071 CCGAGATGTCGTTGCCGT 60.126 61.111 11.66 0.00 45.30 5.68
1933 1986 1.138036 CCGAGATGTCGTTGCCGTA 59.862 57.895 11.66 0.00 45.30 4.02
1934 1987 0.248907 CCGAGATGTCGTTGCCGTAT 60.249 55.000 11.66 0.00 45.30 3.06
1935 1988 0.846401 CGAGATGTCGTTGCCGTATG 59.154 55.000 3.70 0.00 41.57 2.39
1936 1989 1.533129 CGAGATGTCGTTGCCGTATGA 60.533 52.381 3.70 0.00 41.57 2.15
1937 1990 1.852895 GAGATGTCGTTGCCGTATGAC 59.147 52.381 0.00 0.00 35.16 3.06
1938 1991 0.928229 GATGTCGTTGCCGTATGACC 59.072 55.000 0.00 0.00 33.95 4.02
1939 1992 0.535335 ATGTCGTTGCCGTATGACCT 59.465 50.000 0.00 0.00 33.95 3.85
1940 1993 0.389296 TGTCGTTGCCGTATGACCTG 60.389 55.000 0.00 0.00 33.95 4.00
1941 1994 1.082117 GTCGTTGCCGTATGACCTGG 61.082 60.000 0.00 0.00 35.01 4.45
1942 1995 1.216977 CGTTGCCGTATGACCTGGA 59.783 57.895 0.00 0.00 0.00 3.86
1943 1996 0.806102 CGTTGCCGTATGACCTGGAG 60.806 60.000 0.00 0.00 0.00 3.86
1944 1997 0.535335 GTTGCCGTATGACCTGGAGA 59.465 55.000 0.00 0.00 0.00 3.71
1945 1998 1.066430 GTTGCCGTATGACCTGGAGAA 60.066 52.381 0.00 0.00 0.00 2.87
1946 1999 0.535335 TGCCGTATGACCTGGAGAAC 59.465 55.000 0.00 0.00 0.00 3.01
1947 2000 0.179081 GCCGTATGACCTGGAGAACC 60.179 60.000 0.00 0.00 0.00 3.62
1948 2001 1.191535 CCGTATGACCTGGAGAACCA 58.808 55.000 0.00 0.00 44.76 3.67
1949 2002 1.553248 CCGTATGACCTGGAGAACCAA 59.447 52.381 0.00 0.00 46.32 3.67
1950 2003 2.027561 CCGTATGACCTGGAGAACCAAA 60.028 50.000 0.00 0.00 46.32 3.28
1951 2004 3.000727 CGTATGACCTGGAGAACCAAAC 58.999 50.000 0.00 0.00 46.32 2.93
1952 2005 2.586648 ATGACCTGGAGAACCAAACC 57.413 50.000 0.00 0.00 46.32 3.27
1953 2006 1.518367 TGACCTGGAGAACCAAACCT 58.482 50.000 0.00 0.00 46.32 3.50
1954 2007 2.696775 TGACCTGGAGAACCAAACCTA 58.303 47.619 0.00 0.00 46.32 3.08
1955 2008 2.637872 TGACCTGGAGAACCAAACCTAG 59.362 50.000 0.00 0.00 46.32 3.02
1956 2009 1.985895 ACCTGGAGAACCAAACCTAGG 59.014 52.381 7.41 7.41 46.32 3.02
1957 2010 1.282157 CCTGGAGAACCAAACCTAGGG 59.718 57.143 14.81 0.00 46.32 3.53
1958 2011 1.985895 CTGGAGAACCAAACCTAGGGT 59.014 52.381 14.81 2.44 46.32 4.34
1973 2026 1.956802 GGGTTTCCCTTGCAGTTCG 59.043 57.895 0.00 0.00 41.34 3.95
1974 2027 0.536460 GGGTTTCCCTTGCAGTTCGA 60.536 55.000 0.00 0.00 41.34 3.71
1975 2028 0.875059 GGTTTCCCTTGCAGTTCGAG 59.125 55.000 0.00 0.00 0.00 4.04
1976 2029 0.875059 GTTTCCCTTGCAGTTCGAGG 59.125 55.000 0.00 0.00 44.65 4.63
1980 2033 4.606071 CTTGCAGTTCGAGGAGGG 57.394 61.111 0.00 0.00 0.00 4.30
1981 2034 1.078848 CTTGCAGTTCGAGGAGGGG 60.079 63.158 0.00 0.00 0.00 4.79
1982 2035 3.254024 TTGCAGTTCGAGGAGGGGC 62.254 63.158 0.00 0.00 0.00 5.80
1983 2036 3.706373 GCAGTTCGAGGAGGGGCA 61.706 66.667 0.00 0.00 0.00 5.36
1984 2037 3.036429 GCAGTTCGAGGAGGGGCAT 62.036 63.158 0.00 0.00 0.00 4.40
1985 2038 1.686325 GCAGTTCGAGGAGGGGCATA 61.686 60.000 0.00 0.00 0.00 3.14
1986 2039 0.390860 CAGTTCGAGGAGGGGCATAG 59.609 60.000 0.00 0.00 0.00 2.23
1987 2040 0.261991 AGTTCGAGGAGGGGCATAGA 59.738 55.000 0.00 0.00 0.00 1.98
1988 2041 1.133009 AGTTCGAGGAGGGGCATAGAT 60.133 52.381 0.00 0.00 0.00 1.98
1989 2042 2.110188 AGTTCGAGGAGGGGCATAGATA 59.890 50.000 0.00 0.00 0.00 1.98
1990 2043 2.897969 GTTCGAGGAGGGGCATAGATAA 59.102 50.000 0.00 0.00 0.00 1.75
1991 2044 3.474798 TCGAGGAGGGGCATAGATAAT 57.525 47.619 0.00 0.00 0.00 1.28
1992 2045 3.791320 TCGAGGAGGGGCATAGATAATT 58.209 45.455 0.00 0.00 0.00 1.40
1993 2046 3.515502 TCGAGGAGGGGCATAGATAATTG 59.484 47.826 0.00 0.00 0.00 2.32
1994 2047 3.615155 GAGGAGGGGCATAGATAATTGC 58.385 50.000 0.00 0.00 38.14 3.56
2002 2055 4.811555 GCATAGATAATTGCCGTGACAA 57.188 40.909 0.00 0.00 32.66 3.18
2003 2056 4.527564 GCATAGATAATTGCCGTGACAAC 58.472 43.478 0.00 0.00 32.66 3.32
2012 2065 3.244105 CGTGACAACGCCTCCAAG 58.756 61.111 0.00 0.00 43.98 3.61
2013 2066 1.300620 CGTGACAACGCCTCCAAGA 60.301 57.895 0.00 0.00 43.98 3.02
2014 2067 0.878523 CGTGACAACGCCTCCAAGAA 60.879 55.000 0.00 0.00 43.98 2.52
2015 2068 0.868406 GTGACAACGCCTCCAAGAAG 59.132 55.000 0.00 0.00 0.00 2.85
2016 2069 0.250295 TGACAACGCCTCCAAGAAGG 60.250 55.000 0.00 0.00 39.62 3.46
2017 2070 0.955919 GACAACGCCTCCAAGAAGGG 60.956 60.000 0.00 0.00 36.88 3.95
2021 2074 2.269241 GCCTCCAAGAAGGGGACG 59.731 66.667 0.00 0.00 42.25 4.79
2022 2075 2.990479 CCTCCAAGAAGGGGACGG 59.010 66.667 0.00 0.00 42.25 4.79
2023 2076 2.269241 CTCCAAGAAGGGGACGGC 59.731 66.667 0.00 0.00 42.25 5.68
2024 2077 3.665675 CTCCAAGAAGGGGACGGCG 62.666 68.421 4.80 4.80 42.25 6.46
2025 2078 4.016706 CCAAGAAGGGGACGGCGT 62.017 66.667 14.65 14.65 0.00 5.68
2026 2079 2.434359 CAAGAAGGGGACGGCGTC 60.434 66.667 30.72 30.72 0.00 5.19
2035 2088 2.960170 GACGGCGTCCACTAGTGT 59.040 61.111 28.72 0.61 0.00 3.55
2036 2089 1.288127 GACGGCGTCCACTAGTGTT 59.712 57.895 28.72 0.00 0.00 3.32
2037 2090 1.006571 ACGGCGTCCACTAGTGTTG 60.007 57.895 21.18 11.30 0.00 3.33
2038 2091 2.380410 CGGCGTCCACTAGTGTTGC 61.380 63.158 21.18 19.33 0.00 4.17
2039 2092 2.033194 GGCGTCCACTAGTGTTGCC 61.033 63.158 25.21 25.21 34.64 4.52
2040 2093 2.380410 GCGTCCACTAGTGTTGCCG 61.380 63.158 21.18 16.55 0.00 5.69
2041 2094 2.380410 CGTCCACTAGTGTTGCCGC 61.380 63.158 21.18 4.27 0.00 6.53
2042 2095 1.004918 GTCCACTAGTGTTGCCGCT 60.005 57.895 21.18 0.00 35.15 5.52
2043 2096 1.005037 TCCACTAGTGTTGCCGCTG 60.005 57.895 21.18 3.81 32.54 5.18
2044 2097 1.301716 CCACTAGTGTTGCCGCTGT 60.302 57.895 21.18 0.00 32.54 4.40
2045 2098 0.884704 CCACTAGTGTTGCCGCTGTT 60.885 55.000 21.18 0.00 32.54 3.16
2046 2099 1.606994 CCACTAGTGTTGCCGCTGTTA 60.607 52.381 21.18 0.00 32.54 2.41
2047 2100 1.726791 CACTAGTGTTGCCGCTGTTAG 59.273 52.381 15.06 0.00 32.54 2.34
2048 2101 0.721718 CTAGTGTTGCCGCTGTTAGC 59.278 55.000 0.00 0.00 38.02 3.09
2049 2102 0.034198 TAGTGTTGCCGCTGTTAGCA 59.966 50.000 1.45 0.00 42.58 3.49
2050 2103 0.606401 AGTGTTGCCGCTGTTAGCAT 60.606 50.000 1.45 0.00 42.58 3.79
2051 2104 1.083489 GTGTTGCCGCTGTTAGCATA 58.917 50.000 1.45 0.00 42.58 3.14
2052 2105 1.062587 GTGTTGCCGCTGTTAGCATAG 59.937 52.381 1.45 0.00 42.58 2.23
2053 2106 0.657840 GTTGCCGCTGTTAGCATAGG 59.342 55.000 1.45 0.00 42.58 2.57
2054 2107 0.539518 TTGCCGCTGTTAGCATAGGA 59.460 50.000 1.45 0.00 42.58 2.94
2055 2108 0.758734 TGCCGCTGTTAGCATAGGAT 59.241 50.000 1.45 0.00 42.58 3.24
2056 2109 1.151668 GCCGCTGTTAGCATAGGATG 58.848 55.000 1.45 0.00 42.58 3.51
2069 2122 4.931661 CATAGGATGCAAGGATTTTGCT 57.068 40.909 12.45 0.00 45.13 3.91
2070 2123 4.617959 CATAGGATGCAAGGATTTTGCTG 58.382 43.478 12.45 0.00 45.13 4.41
2071 2124 2.532843 AGGATGCAAGGATTTTGCTGT 58.467 42.857 12.45 2.51 45.13 4.40
2072 2125 3.700538 AGGATGCAAGGATTTTGCTGTA 58.299 40.909 12.45 0.00 45.13 2.74
2073 2126 4.284178 AGGATGCAAGGATTTTGCTGTAT 58.716 39.130 12.45 0.00 45.13 2.29
2074 2127 4.340381 AGGATGCAAGGATTTTGCTGTATC 59.660 41.667 12.45 7.52 45.13 2.24
2075 2128 4.500375 GGATGCAAGGATTTTGCTGTATCC 60.500 45.833 12.45 11.92 45.13 2.59
2076 2129 3.429492 TGCAAGGATTTTGCTGTATCCA 58.571 40.909 12.45 0.00 45.13 3.41
2077 2130 3.444742 TGCAAGGATTTTGCTGTATCCAG 59.555 43.478 12.45 6.86 45.13 3.86
2078 2131 3.696051 GCAAGGATTTTGCTGTATCCAGA 59.304 43.478 12.12 0.00 42.29 3.86
2079 2132 4.201990 GCAAGGATTTTGCTGTATCCAGAG 60.202 45.833 12.12 4.82 42.29 3.35
2080 2133 4.851639 AGGATTTTGCTGTATCCAGAGT 57.148 40.909 12.12 0.00 42.29 3.24
2081 2134 4.775236 AGGATTTTGCTGTATCCAGAGTC 58.225 43.478 12.12 0.00 42.29 3.36
2082 2135 3.879892 GGATTTTGCTGTATCCAGAGTCC 59.120 47.826 0.00 0.00 41.50 3.85
2083 2136 2.672961 TTTGCTGTATCCAGAGTCCG 57.327 50.000 0.00 0.00 41.50 4.79
2084 2137 1.847328 TTGCTGTATCCAGAGTCCGA 58.153 50.000 0.00 0.00 41.50 4.55
2085 2138 1.847328 TGCTGTATCCAGAGTCCGAA 58.153 50.000 0.00 0.00 41.50 4.30
2086 2139 2.388735 TGCTGTATCCAGAGTCCGAAT 58.611 47.619 0.00 0.00 41.50 3.34
2087 2140 3.562182 TGCTGTATCCAGAGTCCGAATA 58.438 45.455 0.00 0.00 41.50 1.75
2088 2141 3.958147 TGCTGTATCCAGAGTCCGAATAA 59.042 43.478 0.00 0.00 41.50 1.40
2089 2142 4.588951 TGCTGTATCCAGAGTCCGAATAAT 59.411 41.667 0.00 0.00 41.50 1.28
2090 2143 5.164954 GCTGTATCCAGAGTCCGAATAATC 58.835 45.833 0.00 0.00 41.50 1.75
2091 2144 5.715070 CTGTATCCAGAGTCCGAATAATCC 58.285 45.833 0.00 0.00 41.50 3.01
2092 2145 4.527038 TGTATCCAGAGTCCGAATAATCCC 59.473 45.833 0.00 0.00 0.00 3.85
2093 2146 3.040655 TCCAGAGTCCGAATAATCCCA 57.959 47.619 0.00 0.00 0.00 4.37
2094 2147 3.380393 TCCAGAGTCCGAATAATCCCAA 58.620 45.455 0.00 0.00 0.00 4.12
2095 2148 3.778075 TCCAGAGTCCGAATAATCCCAAA 59.222 43.478 0.00 0.00 0.00 3.28
2096 2149 4.412199 TCCAGAGTCCGAATAATCCCAAAT 59.588 41.667 0.00 0.00 0.00 2.32
2097 2150 4.757149 CCAGAGTCCGAATAATCCCAAATC 59.243 45.833 0.00 0.00 0.00 2.17
2098 2151 5.368145 CAGAGTCCGAATAATCCCAAATCA 58.632 41.667 0.00 0.00 0.00 2.57
2099 2152 6.000219 CAGAGTCCGAATAATCCCAAATCAT 59.000 40.000 0.00 0.00 0.00 2.45
2100 2153 6.148480 CAGAGTCCGAATAATCCCAAATCATC 59.852 42.308 0.00 0.00 0.00 2.92
2101 2154 5.940617 AGTCCGAATAATCCCAAATCATCA 58.059 37.500 0.00 0.00 0.00 3.07
2102 2155 6.546484 AGTCCGAATAATCCCAAATCATCAT 58.454 36.000 0.00 0.00 0.00 2.45
2103 2156 7.689299 AGTCCGAATAATCCCAAATCATCATA 58.311 34.615 0.00 0.00 0.00 2.15
2104 2157 7.826252 AGTCCGAATAATCCCAAATCATCATAG 59.174 37.037 0.00 0.00 0.00 2.23
2105 2158 6.599244 TCCGAATAATCCCAAATCATCATAGC 59.401 38.462 0.00 0.00 0.00 2.97
2106 2159 6.375174 CCGAATAATCCCAAATCATCATAGCA 59.625 38.462 0.00 0.00 0.00 3.49
2107 2160 7.067859 CCGAATAATCCCAAATCATCATAGCAT 59.932 37.037 0.00 0.00 0.00 3.79
2108 2161 7.913821 CGAATAATCCCAAATCATCATAGCATG 59.086 37.037 0.00 0.00 0.00 4.06
2109 2162 8.888836 AATAATCCCAAATCATCATAGCATGA 57.111 30.769 0.00 2.05 44.55 3.07
2110 2163 8.888836 ATAATCCCAAATCATCATAGCATGAA 57.111 30.769 0.00 0.00 43.50 2.57
2111 2164 7.792364 AATCCCAAATCATCATAGCATGAAT 57.208 32.000 0.00 0.00 43.50 2.57
2112 2165 7.792364 ATCCCAAATCATCATAGCATGAATT 57.208 32.000 0.00 0.00 43.50 2.17
2113 2166 6.988522 TCCCAAATCATCATAGCATGAATTG 58.011 36.000 0.00 5.85 43.50 2.32
2114 2167 6.778559 TCCCAAATCATCATAGCATGAATTGA 59.221 34.615 11.99 8.59 42.64 2.57
2115 2168 7.288158 TCCCAAATCATCATAGCATGAATTGAA 59.712 33.333 11.99 1.18 42.64 2.69
2116 2169 7.598869 CCCAAATCATCATAGCATGAATTGAAG 59.401 37.037 11.99 2.86 42.64 3.02
2117 2170 8.357402 CCAAATCATCATAGCATGAATTGAAGA 58.643 33.333 11.99 0.00 42.64 2.87
2118 2171 9.399403 CAAATCATCATAGCATGAATTGAAGAG 57.601 33.333 0.00 0.00 42.64 2.85
2119 2172 7.689446 ATCATCATAGCATGAATTGAAGAGG 57.311 36.000 0.00 0.00 43.50 3.69
2120 2173 6.834107 TCATCATAGCATGAATTGAAGAGGA 58.166 36.000 0.00 0.00 43.50 3.71
2121 2174 7.284820 TCATCATAGCATGAATTGAAGAGGAA 58.715 34.615 0.00 0.00 43.50 3.36
2122 2175 7.444487 TCATCATAGCATGAATTGAAGAGGAAG 59.556 37.037 0.00 0.00 43.50 3.46
2123 2176 6.656902 TCATAGCATGAATTGAAGAGGAAGT 58.343 36.000 0.00 0.00 36.11 3.01
2124 2177 6.765036 TCATAGCATGAATTGAAGAGGAAGTC 59.235 38.462 0.00 0.00 36.11 3.01
2125 2178 3.937706 AGCATGAATTGAAGAGGAAGTCG 59.062 43.478 0.00 0.00 0.00 4.18
2126 2179 3.064545 GCATGAATTGAAGAGGAAGTCGG 59.935 47.826 0.00 0.00 0.00 4.79
2127 2180 3.334583 TGAATTGAAGAGGAAGTCGGG 57.665 47.619 0.00 0.00 0.00 5.14
2128 2181 2.010497 GAATTGAAGAGGAAGTCGGGC 58.990 52.381 0.00 0.00 0.00 6.13
2129 2182 0.984230 ATTGAAGAGGAAGTCGGGCA 59.016 50.000 0.00 0.00 0.00 5.36
2130 2183 0.984230 TTGAAGAGGAAGTCGGGCAT 59.016 50.000 0.00 0.00 0.00 4.40
2131 2184 1.860641 TGAAGAGGAAGTCGGGCATA 58.139 50.000 0.00 0.00 0.00 3.14
2132 2185 2.184533 TGAAGAGGAAGTCGGGCATAA 58.815 47.619 0.00 0.00 0.00 1.90
2133 2186 2.168521 TGAAGAGGAAGTCGGGCATAAG 59.831 50.000 0.00 0.00 0.00 1.73
2134 2187 0.466124 AGAGGAAGTCGGGCATAAGC 59.534 55.000 0.00 0.00 41.10 3.09
2147 2200 3.715628 GCATAAGCCGAAACCATGAAT 57.284 42.857 0.00 0.00 33.58 2.57
2148 2201 3.374745 GCATAAGCCGAAACCATGAATG 58.625 45.455 0.00 0.00 33.58 2.67
2149 2202 3.374745 CATAAGCCGAAACCATGAATGC 58.625 45.455 0.00 0.00 0.00 3.56
2150 2203 1.255882 AAGCCGAAACCATGAATGCA 58.744 45.000 0.00 0.00 0.00 3.96
2151 2204 1.255882 AGCCGAAACCATGAATGCAA 58.744 45.000 0.00 0.00 0.00 4.08
2152 2205 1.203052 AGCCGAAACCATGAATGCAAG 59.797 47.619 0.00 0.00 0.00 4.01
2153 2206 1.202114 GCCGAAACCATGAATGCAAGA 59.798 47.619 0.00 0.00 0.00 3.02
2154 2207 2.352617 GCCGAAACCATGAATGCAAGAA 60.353 45.455 0.00 0.00 0.00 2.52
2155 2208 3.676873 GCCGAAACCATGAATGCAAGAAT 60.677 43.478 0.00 0.00 0.00 2.40
2156 2209 3.861113 CCGAAACCATGAATGCAAGAATG 59.139 43.478 0.00 0.00 0.00 2.67
2157 2210 3.861113 CGAAACCATGAATGCAAGAATGG 59.139 43.478 18.42 18.42 44.31 3.16
2158 2211 3.899052 AACCATGAATGCAAGAATGGG 57.101 42.857 21.97 9.96 43.26 4.00
2159 2212 3.104519 ACCATGAATGCAAGAATGGGA 57.895 42.857 21.97 0.00 43.26 4.37
2160 2213 3.028850 ACCATGAATGCAAGAATGGGAG 58.971 45.455 21.97 5.10 43.26 4.30
2161 2214 2.223971 CCATGAATGCAAGAATGGGAGC 60.224 50.000 14.21 0.00 36.68 4.70
2162 2215 2.219080 TGAATGCAAGAATGGGAGCA 57.781 45.000 0.00 0.00 41.73 4.26
2163 2216 2.527497 TGAATGCAAGAATGGGAGCAA 58.473 42.857 0.00 0.00 40.76 3.91
2164 2217 2.231964 TGAATGCAAGAATGGGAGCAAC 59.768 45.455 0.00 0.00 40.76 4.17
2165 2218 0.813184 ATGCAAGAATGGGAGCAACG 59.187 50.000 0.00 0.00 40.76 4.10
2166 2219 1.153958 GCAAGAATGGGAGCAACGC 60.154 57.895 0.00 0.00 0.00 4.84
2167 2220 1.508088 CAAGAATGGGAGCAACGCC 59.492 57.895 0.00 0.00 0.00 5.68
2168 2221 1.678970 AAGAATGGGAGCAACGCCC 60.679 57.895 0.00 0.00 43.97 6.13
2172 2225 4.641645 TGGGAGCAACGCCCACTG 62.642 66.667 4.84 0.00 46.08 3.66
2178 2231 3.726517 CAACGCCCACTGCCGAAG 61.727 66.667 0.00 0.00 36.24 3.79
2179 2232 3.936203 AACGCCCACTGCCGAAGA 61.936 61.111 0.00 0.00 36.24 2.87
2180 2233 3.883744 AACGCCCACTGCCGAAGAG 62.884 63.158 0.00 0.00 36.24 2.85
2190 2243 4.760047 CCGAAGAGGCACCGGGTG 62.760 72.222 22.87 22.87 39.59 4.61
2213 2266 3.906660 CAGGTGCTGGAGTAACGAA 57.093 52.632 0.00 0.00 0.00 3.85
2214 2267 1.714794 CAGGTGCTGGAGTAACGAAG 58.285 55.000 0.00 0.00 0.00 3.79
2215 2268 0.037232 AGGTGCTGGAGTAACGAAGC 60.037 55.000 0.00 0.00 36.18 3.86
2216 2269 0.320421 GGTGCTGGAGTAACGAAGCA 60.320 55.000 0.00 0.00 43.10 3.91
2217 2270 1.071605 GTGCTGGAGTAACGAAGCAG 58.928 55.000 0.00 0.00 45.73 4.24
2218 2271 0.679505 TGCTGGAGTAACGAAGCAGT 59.320 50.000 0.00 0.00 40.59 4.40
2219 2272 1.071605 GCTGGAGTAACGAAGCAGTG 58.928 55.000 0.00 0.00 35.69 3.66
2220 2273 1.336887 GCTGGAGTAACGAAGCAGTGA 60.337 52.381 0.00 0.00 35.69 3.41
2221 2274 2.866460 GCTGGAGTAACGAAGCAGTGAA 60.866 50.000 0.00 0.00 35.69 3.18
2222 2275 2.989840 CTGGAGTAACGAAGCAGTGAAG 59.010 50.000 0.00 0.00 0.00 3.02
2223 2276 2.288825 TGGAGTAACGAAGCAGTGAAGG 60.289 50.000 0.00 0.00 0.00 3.46
2224 2277 2.338500 GAGTAACGAAGCAGTGAAGGG 58.662 52.381 0.00 0.00 0.00 3.95
2225 2278 1.968493 AGTAACGAAGCAGTGAAGGGA 59.032 47.619 0.00 0.00 0.00 4.20
2226 2279 2.067013 GTAACGAAGCAGTGAAGGGAC 58.933 52.381 0.00 0.00 0.00 4.46
2227 2280 0.468226 AACGAAGCAGTGAAGGGACA 59.532 50.000 0.00 0.00 0.00 4.02
2228 2281 0.468226 ACGAAGCAGTGAAGGGACAA 59.532 50.000 0.00 0.00 0.00 3.18
2229 2282 1.134220 ACGAAGCAGTGAAGGGACAAA 60.134 47.619 0.00 0.00 0.00 2.83
2230 2283 2.154462 CGAAGCAGTGAAGGGACAAAT 58.846 47.619 0.00 0.00 0.00 2.32
2231 2284 2.095567 CGAAGCAGTGAAGGGACAAATG 60.096 50.000 0.00 0.00 0.00 2.32
2232 2285 1.915141 AGCAGTGAAGGGACAAATGG 58.085 50.000 0.00 0.00 0.00 3.16
2233 2286 0.890683 GCAGTGAAGGGACAAATGGG 59.109 55.000 0.00 0.00 0.00 4.00
2234 2287 1.549203 CAGTGAAGGGACAAATGGGG 58.451 55.000 0.00 0.00 0.00 4.96
2235 2288 0.251787 AGTGAAGGGACAAATGGGGC 60.252 55.000 0.00 0.00 0.00 5.80
2236 2289 0.541764 GTGAAGGGACAAATGGGGCA 60.542 55.000 0.00 0.00 0.00 5.36
2237 2290 0.541764 TGAAGGGACAAATGGGGCAC 60.542 55.000 0.00 0.00 0.00 5.01
2238 2291 1.595093 GAAGGGACAAATGGGGCACG 61.595 60.000 0.00 0.00 0.00 5.34
2239 2292 2.034999 GGGACAAATGGGGCACGA 59.965 61.111 0.00 0.00 0.00 4.35
2240 2293 1.605165 GGGACAAATGGGGCACGAA 60.605 57.895 0.00 0.00 0.00 3.85
2241 2294 1.595093 GGGACAAATGGGGCACGAAG 61.595 60.000 0.00 0.00 0.00 3.79
2242 2295 1.595093 GGACAAATGGGGCACGAAGG 61.595 60.000 0.00 0.00 0.00 3.46
2243 2296 0.893727 GACAAATGGGGCACGAAGGT 60.894 55.000 0.00 0.00 0.00 3.50
2244 2297 0.469144 ACAAATGGGGCACGAAGGTT 60.469 50.000 0.00 0.00 0.00 3.50
2245 2298 0.038343 CAAATGGGGCACGAAGGTTG 60.038 55.000 0.00 0.00 0.00 3.77
2246 2299 1.184970 AAATGGGGCACGAAGGTTGG 61.185 55.000 0.00 0.00 0.00 3.77
2247 2300 4.966787 TGGGGCACGAAGGTTGGC 62.967 66.667 0.00 0.00 0.00 4.52
2252 2305 3.726517 CACGAAGGTTGGCGGCTG 61.727 66.667 11.43 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.340991 GGCAACTGGAAATCTGGGCTA 60.341 52.381 0.00 0.00 0.00 3.93
44 45 0.539438 AGAATGCCGGCAACTGGAAA 60.539 50.000 36.33 7.40 32.87 3.13
133 135 6.449635 TCGATATTTATTGCATTATGGGCC 57.550 37.500 0.00 0.00 0.00 5.80
210 214 2.657296 CGTTGTGCGAGTCCACGT 60.657 61.111 7.10 0.00 44.77 4.49
346 354 8.405531 GCAAAGTAAAGTATTGCATATGAAGGA 58.594 33.333 6.97 0.00 46.57 3.36
361 369 4.879598 AGTGTAGTAGCGCAAAGTAAAGT 58.120 39.130 11.47 0.00 0.00 2.66
362 371 5.162075 AGAGTGTAGTAGCGCAAAGTAAAG 58.838 41.667 11.47 0.00 0.00 1.85
371 380 4.207429 GCAATTCTAAGAGTGTAGTAGCGC 59.793 45.833 0.00 0.00 0.00 5.92
376 385 9.973450 CTATACATGCAATTCTAAGAGTGTAGT 57.027 33.333 0.00 0.00 0.00 2.73
399 408 4.082571 GCACAAGTCAAGCAATCAACCTAT 60.083 41.667 0.00 0.00 0.00 2.57
439 448 6.463755 GCCTTTTCCCAATTTTAAGTCTTGGA 60.464 38.462 12.05 0.00 41.61 3.53
526 537 5.540911 CCTTCAATTTGTTGCAAGGTACAT 58.459 37.500 0.00 0.00 31.05 2.29
527 538 4.739137 GCCTTCAATTTGTTGCAAGGTACA 60.739 41.667 0.00 0.00 34.57 2.90
528 539 3.740832 GCCTTCAATTTGTTGCAAGGTAC 59.259 43.478 0.00 0.00 34.57 3.34
580 591 5.987347 AGTCAAACAAGATGCAAATCCTTTG 59.013 36.000 0.00 0.00 43.44 2.77
581 592 6.165700 AGTCAAACAAGATGCAAATCCTTT 57.834 33.333 0.00 0.00 0.00 3.11
607 618 7.069331 CCCATATAAATTGCAAGACCTTTGGTA 59.931 37.037 4.94 0.00 35.25 3.25
626 637 7.047891 GGAAATGATCGTTCTATGCCCATATA 58.952 38.462 0.00 0.00 0.00 0.86
642 653 6.959361 ACGTTACATGCTAATGGAAATGATC 58.041 36.000 0.00 0.00 38.39 2.92
653 664 7.395190 TCTTCCTAGTAACGTTACATGCTAA 57.605 36.000 33.43 20.81 36.12 3.09
656 667 6.366877 TGTTTCTTCCTAGTAACGTTACATGC 59.633 38.462 33.43 12.55 35.21 4.06
657 668 7.878477 TGTTTCTTCCTAGTAACGTTACATG 57.122 36.000 33.43 25.08 35.21 3.21
699 710 6.106003 TCAGCTTTTAGCATTTCTGTATCGA 58.894 36.000 1.09 0.00 45.56 3.59
704 715 6.660949 ACCTTATCAGCTTTTAGCATTTCTGT 59.339 34.615 1.09 0.00 45.56 3.41
705 716 6.971184 CACCTTATCAGCTTTTAGCATTTCTG 59.029 38.462 1.09 0.00 45.56 3.02
710 721 5.065218 CGAACACCTTATCAGCTTTTAGCAT 59.935 40.000 1.09 0.00 45.56 3.79
712 723 4.630069 TCGAACACCTTATCAGCTTTTAGC 59.370 41.667 0.00 0.00 42.84 3.09
724 735 6.708949 AGAAGCAATTAACTTCGAACACCTTA 59.291 34.615 12.36 0.00 46.54 2.69
744 755 5.909610 GCGATATCAACCACAAATAAGAAGC 59.090 40.000 3.12 0.00 0.00 3.86
752 763 3.823873 ACCTTTGCGATATCAACCACAAA 59.176 39.130 3.12 4.55 0.00 2.83
766 777 3.589988 AGTTCATAGAGACACCTTTGCG 58.410 45.455 0.00 0.00 0.00 4.85
781 792 9.566432 ACTTTGAGTTCTTTGAATCTAGTTCAT 57.434 29.630 8.08 0.00 45.77 2.57
782 793 8.830580 CACTTTGAGTTCTTTGAATCTAGTTCA 58.169 33.333 4.31 4.31 44.87 3.18
853 864 6.767902 AGCGTAGTTCAACATCATCCAATAAT 59.232 34.615 0.00 0.00 0.00 1.28
950 968 7.533426 AGTAAAATCATTTGCAGCAGTCTTAG 58.467 34.615 0.00 0.00 34.02 2.18
969 987 7.362056 GCAATGGCAAATCTGACTCTAGTAAAA 60.362 37.037 0.00 0.00 40.72 1.52
1045 1064 9.965748 GAACAAAATTCGACAAGAAATTGAAAA 57.034 25.926 13.08 0.00 42.91 2.29
1049 1068 9.412390 CAAAGAACAAAATTCGACAAGAAATTG 57.588 29.630 0.00 7.66 42.91 2.32
1054 1073 7.148222 TGGTACAAAGAACAAAATTCGACAAGA 60.148 33.333 0.00 0.00 31.92 3.02
1117 1136 9.565213 CCTCAAATAGTTCTTTAGCAATTTCAG 57.435 33.333 0.00 0.00 0.00 3.02
1280 1302 4.595762 AGCAAACTGAGCATTTCACATT 57.404 36.364 0.00 0.00 0.00 2.71
1282 1304 4.389890 AAAGCAAACTGAGCATTTCACA 57.610 36.364 0.00 0.00 0.00 3.58
1318 1340 5.728637 ACTCAATTCTTCCAAACATTCCC 57.271 39.130 0.00 0.00 0.00 3.97
1381 1403 3.440127 TGTTTTTGGATCCTCCCCAATC 58.560 45.455 14.23 0.00 42.63 2.67
1397 1423 8.421002 AGTTAGGCATGAACTTACATTTGTTTT 58.579 29.630 0.00 0.00 33.25 2.43
1446 1472 7.010023 GTCAAAACAAGTTGCTACTTAGATCG 58.990 38.462 13.23 3.77 42.67 3.69
1462 1488 8.909671 GCAAAACAAAAATTCATGTCAAAACAA 58.090 25.926 0.00 0.00 39.30 2.83
1501 1527 7.322664 TGCATTCCTAAATTTGAATTGAGACC 58.677 34.615 0.00 0.00 29.70 3.85
1507 1533 8.625786 AAAGCTTGCATTCCTAAATTTGAATT 57.374 26.923 0.00 0.00 0.00 2.17
1642 1691 9.355916 CTAATATCCAGTACATAGCATAGCCTA 57.644 37.037 0.00 0.00 0.00 3.93
1698 1749 2.903784 GGGGCCCTTGTTTACTCAAAAT 59.096 45.455 24.38 0.00 0.00 1.82
1730 1783 4.361059 AGATATATGGGGCCCAAGGAAAAT 59.639 41.667 32.57 16.84 36.95 1.82
1733 1786 3.018236 AGATATATGGGGCCCAAGGAA 57.982 47.619 32.57 16.04 36.95 3.36
1757 1810 1.834822 GGAGCATCTAGGGTCGGCT 60.835 63.158 0.00 0.00 36.17 5.52
1769 1822 6.265196 TGTTTTTCTCTATTTGTGTGGAGCAT 59.735 34.615 0.00 0.00 0.00 3.79
1770 1823 5.592282 TGTTTTTCTCTATTTGTGTGGAGCA 59.408 36.000 0.00 0.00 0.00 4.26
1771 1824 6.072112 TGTTTTTCTCTATTTGTGTGGAGC 57.928 37.500 0.00 0.00 0.00 4.70
1772 1825 7.965107 GCTATGTTTTTCTCTATTTGTGTGGAG 59.035 37.037 0.00 0.00 0.00 3.86
1773 1826 7.665559 AGCTATGTTTTTCTCTATTTGTGTGGA 59.334 33.333 0.00 0.00 0.00 4.02
1774 1827 7.820648 AGCTATGTTTTTCTCTATTTGTGTGG 58.179 34.615 0.00 0.00 0.00 4.17
1781 1834 8.604890 GCGAGTTTAGCTATGTTTTTCTCTATT 58.395 33.333 0.00 0.00 0.00 1.73
1782 1835 7.764443 TGCGAGTTTAGCTATGTTTTTCTCTAT 59.236 33.333 0.00 0.00 35.28 1.98
1783 1836 7.094631 TGCGAGTTTAGCTATGTTTTTCTCTA 58.905 34.615 0.00 0.00 35.28 2.43
1784 1837 5.932303 TGCGAGTTTAGCTATGTTTTTCTCT 59.068 36.000 0.00 0.00 35.28 3.10
1785 1838 6.165659 TGCGAGTTTAGCTATGTTTTTCTC 57.834 37.500 0.00 0.00 35.28 2.87
1786 1839 6.371389 GTTGCGAGTTTAGCTATGTTTTTCT 58.629 36.000 0.00 0.00 35.28 2.52
1787 1840 5.567915 GGTTGCGAGTTTAGCTATGTTTTTC 59.432 40.000 0.00 0.00 35.28 2.29
1788 1841 5.458015 GGTTGCGAGTTTAGCTATGTTTTT 58.542 37.500 0.00 0.00 35.28 1.94
1789 1842 4.082949 GGGTTGCGAGTTTAGCTATGTTTT 60.083 41.667 0.00 0.00 35.28 2.43
1790 1843 3.439129 GGGTTGCGAGTTTAGCTATGTTT 59.561 43.478 0.00 0.00 35.28 2.83
1791 1844 3.007635 GGGTTGCGAGTTTAGCTATGTT 58.992 45.455 0.00 0.00 35.28 2.71
1792 1845 2.236395 AGGGTTGCGAGTTTAGCTATGT 59.764 45.455 0.00 0.00 35.28 2.29
1793 1846 2.609459 CAGGGTTGCGAGTTTAGCTATG 59.391 50.000 0.00 0.00 35.28 2.23
1794 1847 2.500098 TCAGGGTTGCGAGTTTAGCTAT 59.500 45.455 0.00 0.00 35.28 2.97
1795 1848 1.897133 TCAGGGTTGCGAGTTTAGCTA 59.103 47.619 0.00 0.00 35.28 3.32
1796 1849 0.685097 TCAGGGTTGCGAGTTTAGCT 59.315 50.000 0.00 0.00 35.28 3.32
1797 1850 1.079503 CTCAGGGTTGCGAGTTTAGC 58.920 55.000 0.00 0.00 0.00 3.09
1798 1851 2.743636 TCTCAGGGTTGCGAGTTTAG 57.256 50.000 0.00 0.00 0.00 1.85
1799 1852 2.367567 ACTTCTCAGGGTTGCGAGTTTA 59.632 45.455 0.00 0.00 0.00 2.01
1800 1853 1.141053 ACTTCTCAGGGTTGCGAGTTT 59.859 47.619 0.00 0.00 0.00 2.66
1801 1854 0.759346 ACTTCTCAGGGTTGCGAGTT 59.241 50.000 0.00 0.00 0.00 3.01
1802 1855 1.546476 CTACTTCTCAGGGTTGCGAGT 59.454 52.381 0.00 0.00 0.00 4.18
1803 1856 1.546476 ACTACTTCTCAGGGTTGCGAG 59.454 52.381 0.00 0.00 0.00 5.03
1804 1857 1.544691 GACTACTTCTCAGGGTTGCGA 59.455 52.381 0.00 0.00 0.00 5.10
1805 1858 1.404315 GGACTACTTCTCAGGGTTGCG 60.404 57.143 0.00 0.00 0.00 4.85
1806 1859 1.623811 TGGACTACTTCTCAGGGTTGC 59.376 52.381 0.00 0.00 0.00 4.17
1807 1860 4.141914 GGTATGGACTACTTCTCAGGGTTG 60.142 50.000 0.00 0.00 0.00 3.77
1808 1861 4.031611 GGTATGGACTACTTCTCAGGGTT 58.968 47.826 0.00 0.00 0.00 4.11
1809 1862 3.012502 TGGTATGGACTACTTCTCAGGGT 59.987 47.826 0.00 0.00 0.00 4.34
1810 1863 3.643237 TGGTATGGACTACTTCTCAGGG 58.357 50.000 0.00 0.00 0.00 4.45
1811 1864 4.466370 TGTTGGTATGGACTACTTCTCAGG 59.534 45.833 0.00 0.00 0.00 3.86
1812 1865 5.661056 TGTTGGTATGGACTACTTCTCAG 57.339 43.478 0.00 0.00 0.00 3.35
1813 1866 6.620877 ATTGTTGGTATGGACTACTTCTCA 57.379 37.500 0.00 0.00 0.00 3.27
1814 1867 7.921745 GTCTATTGTTGGTATGGACTACTTCTC 59.078 40.741 0.00 0.00 32.59 2.87
1815 1868 7.416438 CGTCTATTGTTGGTATGGACTACTTCT 60.416 40.741 0.00 0.00 33.00 2.85
1816 1869 6.696148 CGTCTATTGTTGGTATGGACTACTTC 59.304 42.308 0.00 0.00 33.00 3.01
1817 1870 6.379133 TCGTCTATTGTTGGTATGGACTACTT 59.621 38.462 0.00 0.00 33.00 2.24
1818 1871 5.889853 TCGTCTATTGTTGGTATGGACTACT 59.110 40.000 0.00 0.00 33.00 2.57
1819 1872 5.975939 GTCGTCTATTGTTGGTATGGACTAC 59.024 44.000 0.00 0.00 33.00 2.73
1820 1873 5.068198 GGTCGTCTATTGTTGGTATGGACTA 59.932 44.000 0.00 0.00 33.00 2.59
1821 1874 4.142004 GGTCGTCTATTGTTGGTATGGACT 60.142 45.833 0.00 0.00 33.00 3.85
1822 1875 4.117685 GGTCGTCTATTGTTGGTATGGAC 58.882 47.826 0.00 0.00 32.15 4.02
1823 1876 3.770388 TGGTCGTCTATTGTTGGTATGGA 59.230 43.478 0.00 0.00 0.00 3.41
1824 1877 4.131649 TGGTCGTCTATTGTTGGTATGG 57.868 45.455 0.00 0.00 0.00 2.74
1825 1878 6.489127 TTTTGGTCGTCTATTGTTGGTATG 57.511 37.500 0.00 0.00 0.00 2.39
1826 1879 7.110155 AGATTTTGGTCGTCTATTGTTGGTAT 58.890 34.615 0.00 0.00 0.00 2.73
1827 1880 6.469410 AGATTTTGGTCGTCTATTGTTGGTA 58.531 36.000 0.00 0.00 0.00 3.25
1828 1881 5.313712 AGATTTTGGTCGTCTATTGTTGGT 58.686 37.500 0.00 0.00 0.00 3.67
1829 1882 5.643777 AGAGATTTTGGTCGTCTATTGTTGG 59.356 40.000 0.00 0.00 0.00 3.77
1830 1883 6.727824 AGAGATTTTGGTCGTCTATTGTTG 57.272 37.500 0.00 0.00 0.00 3.33
1831 1884 7.837863 TCTAGAGATTTTGGTCGTCTATTGTT 58.162 34.615 0.00 0.00 0.00 2.83
1832 1885 7.406031 TCTAGAGATTTTGGTCGTCTATTGT 57.594 36.000 0.00 0.00 0.00 2.71
1833 1886 7.596995 GGATCTAGAGATTTTGGTCGTCTATTG 59.403 40.741 0.00 0.00 34.37 1.90
1834 1887 7.287927 TGGATCTAGAGATTTTGGTCGTCTATT 59.712 37.037 0.00 0.00 34.37 1.73
1835 1888 6.778069 TGGATCTAGAGATTTTGGTCGTCTAT 59.222 38.462 0.00 0.00 34.37 1.98
1836 1889 6.127101 TGGATCTAGAGATTTTGGTCGTCTA 58.873 40.000 0.00 0.00 34.37 2.59
1837 1890 4.956700 TGGATCTAGAGATTTTGGTCGTCT 59.043 41.667 0.00 0.00 34.37 4.18
1838 1891 5.067936 TCTGGATCTAGAGATTTTGGTCGTC 59.932 44.000 4.39 0.00 34.37 4.20
1839 1892 4.956700 TCTGGATCTAGAGATTTTGGTCGT 59.043 41.667 4.39 0.00 34.37 4.34
1840 1893 5.521906 TCTGGATCTAGAGATTTTGGTCG 57.478 43.478 4.39 0.00 34.37 4.79
1841 1894 7.504403 TGATTCTGGATCTAGAGATTTTGGTC 58.496 38.462 8.93 0.98 35.69 4.02
1842 1895 7.443302 TGATTCTGGATCTAGAGATTTTGGT 57.557 36.000 8.93 0.00 35.69 3.67
1843 1896 7.444792 CCTTGATTCTGGATCTAGAGATTTTGG 59.555 40.741 8.93 5.54 39.17 3.28
1844 1897 8.209584 TCCTTGATTCTGGATCTAGAGATTTTG 58.790 37.037 8.93 0.00 39.17 2.44
1845 1898 8.329346 TCCTTGATTCTGGATCTAGAGATTTT 57.671 34.615 8.93 0.00 39.17 1.82
1846 1899 7.927683 TCCTTGATTCTGGATCTAGAGATTT 57.072 36.000 8.93 0.00 39.17 2.17
1847 1900 7.513436 ACATCCTTGATTCTGGATCTAGAGATT 59.487 37.037 8.93 0.00 40.76 2.40
1848 1901 7.018150 ACATCCTTGATTCTGGATCTAGAGAT 58.982 38.462 8.93 4.89 40.76 2.75
1849 1902 6.380414 ACATCCTTGATTCTGGATCTAGAGA 58.620 40.000 8.93 2.70 40.76 3.10
1850 1903 6.669125 ACATCCTTGATTCTGGATCTAGAG 57.331 41.667 8.93 0.00 40.76 2.43
1851 1904 6.385176 ACAACATCCTTGATTCTGGATCTAGA 59.615 38.462 4.39 4.39 40.76 2.43
1852 1905 6.590068 ACAACATCCTTGATTCTGGATCTAG 58.410 40.000 0.00 0.00 40.76 2.43
1853 1906 6.156775 TGACAACATCCTTGATTCTGGATCTA 59.843 38.462 8.23 0.00 40.76 1.98
1854 1907 5.045359 TGACAACATCCTTGATTCTGGATCT 60.045 40.000 8.23 0.00 40.76 2.75
1855 1908 5.188434 TGACAACATCCTTGATTCTGGATC 58.812 41.667 8.23 0.00 40.76 3.36
1856 1909 5.183530 TGACAACATCCTTGATTCTGGAT 57.816 39.130 6.12 6.12 43.23 3.41
1857 1910 4.042062 ACTGACAACATCCTTGATTCTGGA 59.958 41.667 2.40 2.40 36.72 3.86
1858 1911 4.330250 ACTGACAACATCCTTGATTCTGG 58.670 43.478 0.00 0.00 0.00 3.86
1859 1912 7.041167 TGTTTACTGACAACATCCTTGATTCTG 60.041 37.037 0.00 0.00 0.00 3.02
1860 1913 6.998074 TGTTTACTGACAACATCCTTGATTCT 59.002 34.615 0.00 0.00 0.00 2.40
1861 1914 7.202016 TGTTTACTGACAACATCCTTGATTC 57.798 36.000 0.00 0.00 0.00 2.52
1862 1915 7.502226 TCTTGTTTACTGACAACATCCTTGATT 59.498 33.333 0.00 0.00 35.76 2.57
1863 1916 6.998074 TCTTGTTTACTGACAACATCCTTGAT 59.002 34.615 0.00 0.00 35.76 2.57
1864 1917 6.353323 TCTTGTTTACTGACAACATCCTTGA 58.647 36.000 0.00 0.00 35.76 3.02
1865 1918 6.618287 TCTTGTTTACTGACAACATCCTTG 57.382 37.500 0.00 0.00 35.76 3.61
1866 1919 6.772716 ACATCTTGTTTACTGACAACATCCTT 59.227 34.615 0.00 0.00 35.76 3.36
1867 1920 6.299141 ACATCTTGTTTACTGACAACATCCT 58.701 36.000 0.00 0.00 35.76 3.24
1868 1921 6.204688 TGACATCTTGTTTACTGACAACATCC 59.795 38.462 0.00 0.00 35.76 3.51
1869 1922 7.072030 GTGACATCTTGTTTACTGACAACATC 58.928 38.462 0.00 0.00 35.76 3.06
1870 1923 6.017109 GGTGACATCTTGTTTACTGACAACAT 60.017 38.462 0.00 0.00 35.76 2.71
1871 1924 5.295787 GGTGACATCTTGTTTACTGACAACA 59.704 40.000 0.00 0.00 35.76 3.33
1872 1925 5.527582 AGGTGACATCTTGTTTACTGACAAC 59.472 40.000 0.00 0.00 35.76 3.32
1873 1926 5.680619 AGGTGACATCTTGTTTACTGACAA 58.319 37.500 0.00 0.00 37.87 3.18
1874 1927 5.290493 AGGTGACATCTTGTTTACTGACA 57.710 39.130 0.00 0.00 0.00 3.58
1875 1928 5.758296 TGAAGGTGACATCTTGTTTACTGAC 59.242 40.000 5.48 0.00 0.00 3.51
1876 1929 5.924356 TGAAGGTGACATCTTGTTTACTGA 58.076 37.500 5.48 0.00 0.00 3.41
1877 1930 6.427853 TCATGAAGGTGACATCTTGTTTACTG 59.572 38.462 5.48 0.00 35.45 2.74
1878 1931 6.533730 TCATGAAGGTGACATCTTGTTTACT 58.466 36.000 5.48 0.00 35.45 2.24
1879 1932 6.801539 TCATGAAGGTGACATCTTGTTTAC 57.198 37.500 5.48 0.00 35.45 2.01
1880 1933 7.439157 CTTCATGAAGGTGACATCTTGTTTA 57.561 36.000 25.14 0.00 35.45 2.01
1881 1934 6.323203 CTTCATGAAGGTGACATCTTGTTT 57.677 37.500 25.14 0.00 35.45 2.83
1882 1935 5.954296 CTTCATGAAGGTGACATCTTGTT 57.046 39.130 25.14 0.00 35.45 2.83
1895 1948 3.620374 CGGTGTCATTCTCCTTCATGAAG 59.380 47.826 25.75 25.75 38.14 3.02
1896 1949 3.260632 TCGGTGTCATTCTCCTTCATGAA 59.739 43.478 8.12 8.12 31.14 2.57
1897 1950 2.831526 TCGGTGTCATTCTCCTTCATGA 59.168 45.455 0.00 0.00 0.00 3.07
1898 1951 3.118992 TCTCGGTGTCATTCTCCTTCATG 60.119 47.826 0.00 0.00 0.00 3.07
1899 1952 3.099905 TCTCGGTGTCATTCTCCTTCAT 58.900 45.455 0.00 0.00 0.00 2.57
1900 1953 2.525368 TCTCGGTGTCATTCTCCTTCA 58.475 47.619 0.00 0.00 0.00 3.02
1901 1954 3.118956 ACATCTCGGTGTCATTCTCCTTC 60.119 47.826 0.00 0.00 0.00 3.46
1902 1955 2.834549 ACATCTCGGTGTCATTCTCCTT 59.165 45.455 0.00 0.00 0.00 3.36
1903 1956 2.428890 GACATCTCGGTGTCATTCTCCT 59.571 50.000 5.48 0.00 46.04 3.69
1904 1957 2.796383 CGACATCTCGGTGTCATTCTCC 60.796 54.545 10.59 0.00 46.89 3.71
1905 1958 2.159366 ACGACATCTCGGTGTCATTCTC 60.159 50.000 10.59 0.00 46.89 2.87
1906 1959 1.819288 ACGACATCTCGGTGTCATTCT 59.181 47.619 10.59 0.00 46.89 2.40
1907 1960 2.279582 ACGACATCTCGGTGTCATTC 57.720 50.000 10.59 0.00 46.89 2.67
1908 1961 2.743636 AACGACATCTCGGTGTCATT 57.256 45.000 10.59 0.00 46.89 2.57
1925 1978 0.535335 TCTCCAGGTCATACGGCAAC 59.465 55.000 0.00 0.00 0.00 4.17
1926 1979 1.066430 GTTCTCCAGGTCATACGGCAA 60.066 52.381 0.00 0.00 0.00 4.52
1927 1980 0.535335 GTTCTCCAGGTCATACGGCA 59.465 55.000 0.00 0.00 0.00 5.69
1928 1981 0.179081 GGTTCTCCAGGTCATACGGC 60.179 60.000 0.00 0.00 0.00 5.68
1929 1982 1.191535 TGGTTCTCCAGGTCATACGG 58.808 55.000 0.00 0.00 39.03 4.02
1930 1983 3.000727 GTTTGGTTCTCCAGGTCATACG 58.999 50.000 0.00 0.00 45.22 3.06
1931 1984 3.009143 AGGTTTGGTTCTCCAGGTCATAC 59.991 47.826 0.00 0.00 45.22 2.39
1932 1985 3.256704 AGGTTTGGTTCTCCAGGTCATA 58.743 45.455 0.00 0.00 45.22 2.15
1933 1986 2.065799 AGGTTTGGTTCTCCAGGTCAT 58.934 47.619 0.00 0.00 45.22 3.06
1934 1987 1.518367 AGGTTTGGTTCTCCAGGTCA 58.482 50.000 0.00 0.00 45.22 4.02
1935 1988 2.027100 CCTAGGTTTGGTTCTCCAGGTC 60.027 54.545 0.00 0.00 45.22 3.85
1936 1989 1.985895 CCTAGGTTTGGTTCTCCAGGT 59.014 52.381 0.00 0.00 45.22 4.00
1937 1990 1.282157 CCCTAGGTTTGGTTCTCCAGG 59.718 57.143 8.29 0.00 45.22 4.45
1938 1991 1.985895 ACCCTAGGTTTGGTTCTCCAG 59.014 52.381 8.29 0.00 45.22 3.86
1939 1992 2.127651 ACCCTAGGTTTGGTTCTCCA 57.872 50.000 8.29 0.00 42.66 3.86
1957 2010 0.875059 CCTCGAACTGCAAGGGAAAC 59.125 55.000 0.00 0.00 39.30 2.78
1958 2011 0.762418 TCCTCGAACTGCAAGGGAAA 59.238 50.000 1.57 0.00 39.30 3.13
1959 2012 0.321671 CTCCTCGAACTGCAAGGGAA 59.678 55.000 1.57 0.00 39.30 3.97
1960 2013 1.544825 CCTCCTCGAACTGCAAGGGA 61.545 60.000 1.57 0.00 39.30 4.20
1961 2014 1.078848 CCTCCTCGAACTGCAAGGG 60.079 63.158 1.57 0.00 39.30 3.95
1962 2015 1.078848 CCCTCCTCGAACTGCAAGG 60.079 63.158 0.00 0.00 39.30 3.61
1963 2016 1.078848 CCCCTCCTCGAACTGCAAG 60.079 63.158 0.00 0.00 42.29 4.01
1964 2017 3.068881 CCCCTCCTCGAACTGCAA 58.931 61.111 0.00 0.00 0.00 4.08
1965 2018 3.706373 GCCCCTCCTCGAACTGCA 61.706 66.667 0.00 0.00 0.00 4.41
1966 2019 1.686325 TATGCCCCTCCTCGAACTGC 61.686 60.000 0.00 0.00 0.00 4.40
1967 2020 0.390860 CTATGCCCCTCCTCGAACTG 59.609 60.000 0.00 0.00 0.00 3.16
1968 2021 0.261991 TCTATGCCCCTCCTCGAACT 59.738 55.000 0.00 0.00 0.00 3.01
1969 2022 1.343069 ATCTATGCCCCTCCTCGAAC 58.657 55.000 0.00 0.00 0.00 3.95
1970 2023 2.992847 TATCTATGCCCCTCCTCGAA 57.007 50.000 0.00 0.00 0.00 3.71
1971 2024 2.992847 TTATCTATGCCCCTCCTCGA 57.007 50.000 0.00 0.00 0.00 4.04
1972 2025 3.866651 CAATTATCTATGCCCCTCCTCG 58.133 50.000 0.00 0.00 0.00 4.63
1973 2026 3.615155 GCAATTATCTATGCCCCTCCTC 58.385 50.000 0.00 0.00 36.56 3.71
1974 2027 3.728385 GCAATTATCTATGCCCCTCCT 57.272 47.619 0.00 0.00 36.56 3.69
1981 2034 4.527564 GTTGTCACGGCAATTATCTATGC 58.472 43.478 0.00 0.00 41.82 3.14
1982 2035 4.761745 CGTTGTCACGGCAATTATCTATG 58.238 43.478 0.00 0.00 43.16 2.23
1996 2049 0.868406 CTTCTTGGAGGCGTTGTCAC 59.132 55.000 0.00 0.00 0.00 3.67
1997 2050 0.250295 CCTTCTTGGAGGCGTTGTCA 60.250 55.000 0.00 0.00 38.35 3.58
1998 2051 0.955919 CCCTTCTTGGAGGCGTTGTC 60.956 60.000 0.00 0.00 38.35 3.18
1999 2052 1.073199 CCCTTCTTGGAGGCGTTGT 59.927 57.895 0.00 0.00 38.35 3.32
2000 2053 1.675641 CCCCTTCTTGGAGGCGTTG 60.676 63.158 0.00 0.00 38.35 4.10
2001 2054 1.846124 TCCCCTTCTTGGAGGCGTT 60.846 57.895 0.00 0.00 38.35 4.84
2002 2055 2.203938 TCCCCTTCTTGGAGGCGT 60.204 61.111 0.00 0.00 38.35 5.68
2003 2056 2.269241 GTCCCCTTCTTGGAGGCG 59.731 66.667 0.00 0.00 38.35 5.52
2004 2057 2.269241 CGTCCCCTTCTTGGAGGC 59.731 66.667 0.00 0.00 38.35 4.70
2005 2058 2.990479 CCGTCCCCTTCTTGGAGG 59.010 66.667 0.00 0.00 38.35 4.30
2006 2059 2.269241 GCCGTCCCCTTCTTGGAG 59.731 66.667 0.00 0.00 38.35 3.86
2007 2060 3.702048 CGCCGTCCCCTTCTTGGA 61.702 66.667 0.00 0.00 38.35 3.53
2008 2061 3.952628 GACGCCGTCCCCTTCTTGG 62.953 68.421 5.81 0.00 0.00 3.61
2009 2062 2.434359 GACGCCGTCCCCTTCTTG 60.434 66.667 5.81 0.00 0.00 3.02
2010 2063 3.703127 GGACGCCGTCCCCTTCTT 61.703 66.667 25.64 0.00 46.19 2.52
2018 2071 1.007336 CAACACTAGTGGACGCCGTC 61.007 60.000 26.12 9.15 34.19 4.79
2019 2072 1.006571 CAACACTAGTGGACGCCGT 60.007 57.895 26.12 0.00 34.19 5.68
2020 2073 2.380410 GCAACACTAGTGGACGCCG 61.380 63.158 26.12 9.01 34.19 6.46
2021 2074 2.033194 GGCAACACTAGTGGACGCC 61.033 63.158 26.63 26.63 36.57 5.68
2022 2075 2.380410 CGGCAACACTAGTGGACGC 61.380 63.158 26.12 22.35 44.56 5.19
2023 2076 3.856508 CGGCAACACTAGTGGACG 58.143 61.111 26.12 18.91 45.21 4.79
2024 2077 1.004918 AGCGGCAACACTAGTGGAC 60.005 57.895 26.12 14.46 34.19 4.02
2025 2078 1.005037 CAGCGGCAACACTAGTGGA 60.005 57.895 26.12 0.00 34.19 4.02
2026 2079 0.884704 AACAGCGGCAACACTAGTGG 60.885 55.000 26.12 10.99 34.19 4.00
2027 2080 1.726791 CTAACAGCGGCAACACTAGTG 59.273 52.381 21.44 21.44 0.00 2.74
2028 2081 1.939838 GCTAACAGCGGCAACACTAGT 60.940 52.381 1.45 0.00 0.00 2.57
2029 2082 0.721718 GCTAACAGCGGCAACACTAG 59.278 55.000 1.45 0.00 0.00 2.57
2030 2083 0.034198 TGCTAACAGCGGCAACACTA 59.966 50.000 1.45 0.00 46.26 2.74
2031 2084 0.606401 ATGCTAACAGCGGCAACACT 60.606 50.000 1.45 0.00 46.26 3.55
2032 2085 1.062587 CTATGCTAACAGCGGCAACAC 59.937 52.381 1.45 0.00 46.26 3.32
2033 2086 1.368641 CTATGCTAACAGCGGCAACA 58.631 50.000 1.45 0.00 46.26 3.33
2034 2087 0.657840 CCTATGCTAACAGCGGCAAC 59.342 55.000 1.45 0.00 46.26 4.17
2035 2088 0.539518 TCCTATGCTAACAGCGGCAA 59.460 50.000 1.45 0.00 46.26 4.52
2036 2089 0.758734 ATCCTATGCTAACAGCGGCA 59.241 50.000 1.45 0.00 46.26 5.69
2037 2090 1.151668 CATCCTATGCTAACAGCGGC 58.848 55.000 0.00 0.00 46.26 6.53
2070 2123 4.527038 TGGGATTATTCGGACTCTGGATAC 59.473 45.833 0.00 0.00 0.00 2.24
2071 2124 4.747583 TGGGATTATTCGGACTCTGGATA 58.252 43.478 0.00 0.00 0.00 2.59
2072 2125 3.587498 TGGGATTATTCGGACTCTGGAT 58.413 45.455 0.00 0.00 0.00 3.41
2073 2126 3.040655 TGGGATTATTCGGACTCTGGA 57.959 47.619 0.00 0.00 0.00 3.86
2074 2127 3.838244 TTGGGATTATTCGGACTCTGG 57.162 47.619 0.00 0.00 0.00 3.86
2075 2128 5.368145 TGATTTGGGATTATTCGGACTCTG 58.632 41.667 0.00 0.00 0.00 3.35
2076 2129 5.630415 TGATTTGGGATTATTCGGACTCT 57.370 39.130 0.00 0.00 0.00 3.24
2077 2130 5.997746 TGATGATTTGGGATTATTCGGACTC 59.002 40.000 0.00 0.00 0.00 3.36
2078 2131 5.940617 TGATGATTTGGGATTATTCGGACT 58.059 37.500 0.00 0.00 0.00 3.85
2079 2132 6.824305 ATGATGATTTGGGATTATTCGGAC 57.176 37.500 0.00 0.00 0.00 4.79
2080 2133 6.599244 GCTATGATGATTTGGGATTATTCGGA 59.401 38.462 0.00 0.00 0.00 4.55
2081 2134 6.375174 TGCTATGATGATTTGGGATTATTCGG 59.625 38.462 0.00 0.00 0.00 4.30
2082 2135 7.381766 TGCTATGATGATTTGGGATTATTCG 57.618 36.000 0.00 0.00 0.00 3.34
2083 2136 8.963725 TCATGCTATGATGATTTGGGATTATTC 58.036 33.333 0.00 0.00 33.59 1.75
2084 2137 8.888836 TCATGCTATGATGATTTGGGATTATT 57.111 30.769 0.00 0.00 33.59 1.40
2085 2138 8.888836 TTCATGCTATGATGATTTGGGATTAT 57.111 30.769 0.00 0.00 39.39 1.28
2086 2139 8.888836 ATTCATGCTATGATGATTTGGGATTA 57.111 30.769 0.00 0.00 39.39 1.75
2087 2140 7.792364 ATTCATGCTATGATGATTTGGGATT 57.208 32.000 0.00 0.00 39.39 3.01
2088 2141 7.453439 TCAATTCATGCTATGATGATTTGGGAT 59.547 33.333 14.42 0.00 40.69 3.85
2089 2142 6.778559 TCAATTCATGCTATGATGATTTGGGA 59.221 34.615 14.42 1.11 40.69 4.37
2090 2143 6.988522 TCAATTCATGCTATGATGATTTGGG 58.011 36.000 14.42 0.00 40.69 4.12
2091 2144 8.357402 TCTTCAATTCATGCTATGATGATTTGG 58.643 33.333 14.42 5.28 40.69 3.28
2092 2145 9.399403 CTCTTCAATTCATGCTATGATGATTTG 57.601 33.333 10.73 10.73 41.17 2.32
2093 2146 8.577296 CCTCTTCAATTCATGCTATGATGATTT 58.423 33.333 9.06 0.00 39.39 2.17
2094 2147 7.942894 TCCTCTTCAATTCATGCTATGATGATT 59.057 33.333 9.06 0.00 39.39 2.57
2095 2148 7.459234 TCCTCTTCAATTCATGCTATGATGAT 58.541 34.615 9.06 0.00 39.39 2.45
2096 2149 6.834107 TCCTCTTCAATTCATGCTATGATGA 58.166 36.000 0.00 0.00 39.39 2.92
2097 2150 7.228906 ACTTCCTCTTCAATTCATGCTATGATG 59.771 37.037 0.00 0.00 39.39 3.07
2098 2151 7.288560 ACTTCCTCTTCAATTCATGCTATGAT 58.711 34.615 0.00 0.00 39.39 2.45
2099 2152 6.656902 ACTTCCTCTTCAATTCATGCTATGA 58.343 36.000 0.00 0.00 37.55 2.15
2100 2153 6.292757 CGACTTCCTCTTCAATTCATGCTATG 60.293 42.308 0.00 0.00 0.00 2.23
2101 2154 5.757320 CGACTTCCTCTTCAATTCATGCTAT 59.243 40.000 0.00 0.00 0.00 2.97
2102 2155 5.111989 CGACTTCCTCTTCAATTCATGCTA 58.888 41.667 0.00 0.00 0.00 3.49
2103 2156 3.937706 CGACTTCCTCTTCAATTCATGCT 59.062 43.478 0.00 0.00 0.00 3.79
2104 2157 3.064545 CCGACTTCCTCTTCAATTCATGC 59.935 47.826 0.00 0.00 0.00 4.06
2105 2158 3.624861 CCCGACTTCCTCTTCAATTCATG 59.375 47.826 0.00 0.00 0.00 3.07
2106 2159 3.878778 CCCGACTTCCTCTTCAATTCAT 58.121 45.455 0.00 0.00 0.00 2.57
2107 2160 2.615493 GCCCGACTTCCTCTTCAATTCA 60.615 50.000 0.00 0.00 0.00 2.57
2108 2161 2.010497 GCCCGACTTCCTCTTCAATTC 58.990 52.381 0.00 0.00 0.00 2.17
2109 2162 1.351017 TGCCCGACTTCCTCTTCAATT 59.649 47.619 0.00 0.00 0.00 2.32
2110 2163 0.984230 TGCCCGACTTCCTCTTCAAT 59.016 50.000 0.00 0.00 0.00 2.57
2111 2164 0.984230 ATGCCCGACTTCCTCTTCAA 59.016 50.000 0.00 0.00 0.00 2.69
2112 2165 1.860641 TATGCCCGACTTCCTCTTCA 58.139 50.000 0.00 0.00 0.00 3.02
2113 2166 2.827652 CTTATGCCCGACTTCCTCTTC 58.172 52.381 0.00 0.00 0.00 2.87
2114 2167 1.134371 GCTTATGCCCGACTTCCTCTT 60.134 52.381 0.00 0.00 0.00 2.85
2115 2168 0.466124 GCTTATGCCCGACTTCCTCT 59.534 55.000 0.00 0.00 0.00 3.69
2116 2169 2.993539 GCTTATGCCCGACTTCCTC 58.006 57.895 0.00 0.00 0.00 3.71
2127 2180 3.374745 CATTCATGGTTTCGGCTTATGC 58.625 45.455 0.00 0.00 38.76 3.14
2128 2181 3.181488 TGCATTCATGGTTTCGGCTTATG 60.181 43.478 0.00 0.00 0.00 1.90
2129 2182 3.023119 TGCATTCATGGTTTCGGCTTAT 58.977 40.909 0.00 0.00 0.00 1.73
2130 2183 2.441410 TGCATTCATGGTTTCGGCTTA 58.559 42.857 0.00 0.00 0.00 3.09
2131 2184 1.255882 TGCATTCATGGTTTCGGCTT 58.744 45.000 0.00 0.00 0.00 4.35
2132 2185 1.203052 CTTGCATTCATGGTTTCGGCT 59.797 47.619 0.00 0.00 0.00 5.52
2133 2186 1.202114 TCTTGCATTCATGGTTTCGGC 59.798 47.619 0.00 0.00 0.00 5.54
2134 2187 3.574284 TTCTTGCATTCATGGTTTCGG 57.426 42.857 0.00 0.00 0.00 4.30
2135 2188 3.861113 CCATTCTTGCATTCATGGTTTCG 59.139 43.478 9.44 0.00 32.82 3.46
2136 2189 4.081531 TCCCATTCTTGCATTCATGGTTTC 60.082 41.667 14.37 0.00 35.31 2.78
2137 2190 3.839490 TCCCATTCTTGCATTCATGGTTT 59.161 39.130 14.37 0.00 35.31 3.27
2138 2191 3.443052 TCCCATTCTTGCATTCATGGTT 58.557 40.909 14.37 0.00 35.31 3.67
2139 2192 3.028850 CTCCCATTCTTGCATTCATGGT 58.971 45.455 14.37 0.00 35.31 3.55
2140 2193 2.223971 GCTCCCATTCTTGCATTCATGG 60.224 50.000 10.34 10.34 36.66 3.66
2141 2194 2.429250 TGCTCCCATTCTTGCATTCATG 59.571 45.455 0.00 0.00 0.00 3.07
2142 2195 2.742348 TGCTCCCATTCTTGCATTCAT 58.258 42.857 0.00 0.00 0.00 2.57
2143 2196 2.219080 TGCTCCCATTCTTGCATTCA 57.781 45.000 0.00 0.00 0.00 2.57
2144 2197 2.733227 CGTTGCTCCCATTCTTGCATTC 60.733 50.000 0.00 0.00 35.27 2.67
2145 2198 1.203052 CGTTGCTCCCATTCTTGCATT 59.797 47.619 0.00 0.00 35.27 3.56
2146 2199 0.813184 CGTTGCTCCCATTCTTGCAT 59.187 50.000 0.00 0.00 35.27 3.96
2147 2200 1.865788 GCGTTGCTCCCATTCTTGCA 61.866 55.000 0.00 0.00 0.00 4.08
2148 2201 1.153958 GCGTTGCTCCCATTCTTGC 60.154 57.895 0.00 0.00 0.00 4.01
2149 2202 1.508088 GGCGTTGCTCCCATTCTTG 59.492 57.895 0.00 0.00 0.00 3.02
2150 2203 1.678970 GGGCGTTGCTCCCATTCTT 60.679 57.895 0.00 0.00 43.37 2.52
2151 2204 2.044946 GGGCGTTGCTCCCATTCT 60.045 61.111 0.00 0.00 43.37 2.40
2173 2226 4.760047 CACCCGGTGCCTCTTCGG 62.760 72.222 4.16 0.00 43.05 4.30
2195 2248 1.714794 CTTCGTTACTCCAGCACCTG 58.285 55.000 0.00 0.00 0.00 4.00
2196 2249 0.037232 GCTTCGTTACTCCAGCACCT 60.037 55.000 0.00 0.00 32.17 4.00
2197 2250 0.320421 TGCTTCGTTACTCCAGCACC 60.320 55.000 0.00 0.00 37.35 5.01
2198 2251 1.071605 CTGCTTCGTTACTCCAGCAC 58.928 55.000 0.00 0.00 37.35 4.40
2199 2252 0.679505 ACTGCTTCGTTACTCCAGCA 59.320 50.000 0.00 0.00 39.98 4.41
2200 2253 1.071605 CACTGCTTCGTTACTCCAGC 58.928 55.000 0.00 0.00 0.00 4.85
2201 2254 2.724977 TCACTGCTTCGTTACTCCAG 57.275 50.000 0.00 0.00 0.00 3.86
2202 2255 2.288825 CCTTCACTGCTTCGTTACTCCA 60.289 50.000 0.00 0.00 0.00 3.86
2203 2256 2.338500 CCTTCACTGCTTCGTTACTCC 58.662 52.381 0.00 0.00 0.00 3.85
2204 2257 2.029290 TCCCTTCACTGCTTCGTTACTC 60.029 50.000 0.00 0.00 0.00 2.59
2205 2258 1.968493 TCCCTTCACTGCTTCGTTACT 59.032 47.619 0.00 0.00 0.00 2.24
2206 2259 2.067013 GTCCCTTCACTGCTTCGTTAC 58.933 52.381 0.00 0.00 0.00 2.50
2207 2260 1.689813 TGTCCCTTCACTGCTTCGTTA 59.310 47.619 0.00 0.00 0.00 3.18
2208 2261 0.468226 TGTCCCTTCACTGCTTCGTT 59.532 50.000 0.00 0.00 0.00 3.85
2209 2262 0.468226 TTGTCCCTTCACTGCTTCGT 59.532 50.000 0.00 0.00 0.00 3.85
2210 2263 1.593196 TTTGTCCCTTCACTGCTTCG 58.407 50.000 0.00 0.00 0.00 3.79
2211 2264 2.229784 CCATTTGTCCCTTCACTGCTTC 59.770 50.000 0.00 0.00 0.00 3.86
2212 2265 2.242043 CCATTTGTCCCTTCACTGCTT 58.758 47.619 0.00 0.00 0.00 3.91
2213 2266 1.548582 CCCATTTGTCCCTTCACTGCT 60.549 52.381 0.00 0.00 0.00 4.24
2214 2267 0.890683 CCCATTTGTCCCTTCACTGC 59.109 55.000 0.00 0.00 0.00 4.40
2215 2268 1.549203 CCCCATTTGTCCCTTCACTG 58.451 55.000 0.00 0.00 0.00 3.66
2216 2269 0.251787 GCCCCATTTGTCCCTTCACT 60.252 55.000 0.00 0.00 0.00 3.41
2217 2270 0.541764 TGCCCCATTTGTCCCTTCAC 60.542 55.000 0.00 0.00 0.00 3.18
2218 2271 0.541764 GTGCCCCATTTGTCCCTTCA 60.542 55.000 0.00 0.00 0.00 3.02
2219 2272 1.595093 CGTGCCCCATTTGTCCCTTC 61.595 60.000 0.00 0.00 0.00 3.46
2220 2273 1.606313 CGTGCCCCATTTGTCCCTT 60.606 57.895 0.00 0.00 0.00 3.95
2221 2274 2.035626 CGTGCCCCATTTGTCCCT 59.964 61.111 0.00 0.00 0.00 4.20
2222 2275 1.595093 CTTCGTGCCCCATTTGTCCC 61.595 60.000 0.00 0.00 0.00 4.46
2223 2276 1.595093 CCTTCGTGCCCCATTTGTCC 61.595 60.000 0.00 0.00 0.00 4.02
2224 2277 0.893727 ACCTTCGTGCCCCATTTGTC 60.894 55.000 0.00 0.00 0.00 3.18
2225 2278 0.469144 AACCTTCGTGCCCCATTTGT 60.469 50.000 0.00 0.00 0.00 2.83
2226 2279 0.038343 CAACCTTCGTGCCCCATTTG 60.038 55.000 0.00 0.00 0.00 2.32
2227 2280 1.184970 CCAACCTTCGTGCCCCATTT 61.185 55.000 0.00 0.00 0.00 2.32
2228 2281 1.606313 CCAACCTTCGTGCCCCATT 60.606 57.895 0.00 0.00 0.00 3.16
2229 2282 2.035626 CCAACCTTCGTGCCCCAT 59.964 61.111 0.00 0.00 0.00 4.00
2230 2283 4.966787 GCCAACCTTCGTGCCCCA 62.967 66.667 0.00 0.00 0.00 4.96
2235 2288 3.726517 CAGCCGCCAACCTTCGTG 61.727 66.667 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.