Multiple sequence alignment - TraesCS7A01G314900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G314900 chr7A 100.000 5866 0 0 1 5866 448711310 448705445 0.000000e+00 10833.0
1 TraesCS7A01G314900 chr7A 97.727 44 1 0 5823 5866 505106996 505107039 6.300000e-10 76.8
2 TraesCS7A01G314900 chr7D 96.646 2415 58 9 2119 4518 395351746 395349340 0.000000e+00 3989.0
3 TraesCS7A01G314900 chr7D 87.990 816 84 10 6 815 395355573 395354766 0.000000e+00 952.0
4 TraesCS7A01G314900 chr7D 93.852 553 34 0 5150 5702 395348701 395348149 0.000000e+00 833.0
5 TraesCS7A01G314900 chr7D 91.627 418 18 6 4512 4927 395349303 395348901 3.970000e-156 562.0
6 TraesCS7A01G314900 chr7D 90.610 426 32 8 1349 1768 395354215 395353792 5.130000e-155 558.0
7 TraesCS7A01G314900 chr7D 89.685 349 22 6 1763 2102 395353760 395353417 3.250000e-117 433.0
8 TraesCS7A01G314900 chr7D 92.537 134 10 0 934 1067 395354763 395354630 6.000000e-45 193.0
9 TraesCS7A01G314900 chr7D 92.000 125 10 0 5702 5826 377037143 377037267 6.040000e-40 176.0
10 TraesCS7A01G314900 chr7D 93.421 76 5 0 1082 1157 395354645 395354570 4.800000e-21 113.0
11 TraesCS7A01G314900 chr7D 90.909 77 7 0 4753 4829 42634939 42635015 2.890000e-18 104.0
12 TraesCS7A01G314900 chr7D 93.878 49 3 0 5818 5866 141764340 141764388 2.270000e-09 75.0
13 TraesCS7A01G314900 chr7D 97.674 43 1 0 5824 5866 309558968 309559010 2.270000e-09 75.0
14 TraesCS7A01G314900 chr7B 94.340 2491 95 17 1763 4221 395064860 395062384 0.000000e+00 3777.0
15 TraesCS7A01G314900 chr7B 85.568 1074 89 20 4 1067 395066565 395065548 0.000000e+00 1064.0
16 TraesCS7A01G314900 chr7B 89.033 693 49 11 1082 1768 395065563 395064892 0.000000e+00 833.0
17 TraesCS7A01G314900 chr7B 93.238 281 15 1 4171 4447 395062383 395062103 1.520000e-110 411.0
18 TraesCS7A01G314900 chr7B 89.542 306 29 2 5150 5455 395051306 395051004 9.220000e-103 385.0
19 TraesCS7A01G314900 chr7B 87.241 290 24 7 4512 4798 395061830 395061551 9.490000e-83 318.0
20 TraesCS7A01G314900 chr7B 86.111 252 28 3 5457 5702 394951060 394950810 1.250000e-66 265.0
21 TraesCS7A01G314900 chr7B 90.909 77 7 0 4754 4830 141852298 141852222 2.890000e-18 104.0
22 TraesCS7A01G314900 chr5D 91.447 152 13 0 4921 5072 74151042 74151193 5.960000e-50 209.0
23 TraesCS7A01G314900 chr5D 89.103 156 14 3 4913 5067 469406932 469407085 2.160000e-44 191.0
24 TraesCS7A01G314900 chr5D 89.437 142 14 1 4926 5066 374313415 374313274 1.680000e-40 178.0
25 TraesCS7A01G314900 chr5D 97.778 45 1 0 5822 5866 116958332 116958288 1.750000e-10 78.7
26 TraesCS7A01G314900 chr3B 91.275 149 11 2 4917 5064 416801303 416801450 9.970000e-48 202.0
27 TraesCS7A01G314900 chr3B 89.412 85 4 4 4747 4829 777994789 777994708 1.040000e-17 102.0
28 TraesCS7A01G314900 chrUn 90.604 149 12 2 4917 5064 136397343 136397196 4.640000e-46 196.0
29 TraesCS7A01G314900 chrUn 97.619 42 1 0 5825 5866 20584043 20584002 8.150000e-09 73.1
30 TraesCS7A01G314900 chr2B 94.488 127 7 0 5700 5826 592771458 592771584 4.640000e-46 196.0
31 TraesCS7A01G314900 chr2B 90.476 126 5 4 5701 5826 43782084 43781966 6.080000e-35 159.0
32 TraesCS7A01G314900 chr4A 89.583 144 13 2 4924 5066 657488580 657488438 1.300000e-41 182.0
33 TraesCS7A01G314900 chr2A 87.919 149 18 0 4922 5070 536269651 536269503 6.040000e-40 176.0
34 TraesCS7A01G314900 chr2A 87.075 147 19 0 4922 5068 618282665 618282811 3.640000e-37 167.0
35 TraesCS7A01G314900 chr2A 89.610 77 8 0 4754 4830 703709008 703709084 1.350000e-16 99.0
36 TraesCS7A01G314900 chr1B 90.152 132 13 0 5695 5826 499897504 499897635 7.820000e-39 172.0
37 TraesCS7A01G314900 chr1B 89.610 77 8 0 4754 4830 527834239 527834315 1.350000e-16 99.0
38 TraesCS7A01G314900 chr5A 86.897 145 18 1 4924 5067 707232875 707232731 1.690000e-35 161.0
39 TraesCS7A01G314900 chr2D 90.789 76 7 0 4754 4829 302248099 302248024 1.040000e-17 102.0
40 TraesCS7A01G314900 chr5B 89.744 78 6 2 4754 4829 21154094 21154017 1.350000e-16 99.0
41 TraesCS7A01G314900 chr3D 87.654 81 10 0 4749 4829 612889715 612889635 1.740000e-15 95.3
42 TraesCS7A01G314900 chr6D 86.905 84 9 2 4746 4829 113614164 113614083 6.260000e-15 93.5
43 TraesCS7A01G314900 chr3A 97.674 43 1 0 5824 5866 331393369 331393411 2.270000e-09 75.0
44 TraesCS7A01G314900 chr1D 95.745 47 1 1 5820 5866 133655142 133655187 2.270000e-09 75.0
45 TraesCS7A01G314900 chr1D 97.619 42 1 0 5825 5866 200569398 200569357 8.150000e-09 73.1
46 TraesCS7A01G314900 chr4D 97.619 42 1 0 5825 5866 441014469 441014510 8.150000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G314900 chr7A 448705445 448711310 5865 True 10833.000 10833 100.000 1 5866 1 chr7A.!!$R1 5865
1 TraesCS7A01G314900 chr7D 395348149 395355573 7424 True 954.125 3989 92.046 6 5702 8 chr7D.!!$R1 5696
2 TraesCS7A01G314900 chr7B 395061551 395066565 5014 True 1280.600 3777 89.884 4 4798 5 chr7B.!!$R4 4794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 401 0.036294 GTTAAGGAGCCGGTGAGCTT 60.036 55.0 1.9 0.0 45.15 3.74 F
487 490 0.103937 CTAGAGGGAAAGCCAGCTCG 59.896 60.0 0.0 0.0 35.15 5.03 F
1627 1922 0.037697 TAGCAGCGTGATTTGTCCGT 60.038 50.0 0.0 0.0 0.00 4.69 F
2452 4471 0.318784 AGTTGCCTTCAGACGACGAC 60.319 55.0 0.0 0.0 0.00 4.34 F
3036 5062 0.829182 AGCTGAAAACAAGGGCAGGG 60.829 55.0 0.0 0.0 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1336 1622 0.384974 TGAAATCGCCGCGACAAAAC 60.385 50.000 19.45 8.73 39.18 2.43 R
2452 4471 0.041576 CATTCGCATCTGCACCATCG 60.042 55.000 2.72 0.00 42.21 3.84 R
3566 5593 3.310774 CCGGCAACAGAATGACAATAGAG 59.689 47.826 0.00 0.00 39.69 2.43 R
4218 6309 1.590259 GCGCCTCTTCATCCTCGAC 60.590 63.158 0.00 0.00 0.00 4.20 R
4975 7289 0.179189 CGATTTTGAACTGCCGCTCC 60.179 55.000 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 1.977009 GCCTGGTTTGTGGCCTACC 60.977 63.158 3.32 7.13 43.11 3.18
62 63 1.000896 CGTGAGGCCCAATCCCTTT 60.001 57.895 0.00 0.00 31.41 3.11
97 98 2.749044 CAGTGCATGAAGGCGGCT 60.749 61.111 5.25 5.25 36.28 5.52
117 119 4.847367 GGCCTGGCCCATTCCTGG 62.847 72.222 27.77 1.86 44.06 4.45
158 160 4.809426 ACGTCACATCGAATAAATCTTCCC 59.191 41.667 0.00 0.00 34.70 3.97
160 162 5.123227 GTCACATCGAATAAATCTTCCCCA 58.877 41.667 0.00 0.00 0.00 4.96
166 168 4.469945 TCGAATAAATCTTCCCCAGTCACT 59.530 41.667 0.00 0.00 0.00 3.41
173 175 2.025226 TCTTCCCCAGTCACTATCTCGT 60.025 50.000 0.00 0.00 0.00 4.18
205 207 2.419021 CGCGGAGGGGTTTGTAGAAATA 60.419 50.000 0.00 0.00 36.55 1.40
231 233 3.369471 CCTCGCTACTCCTTTTGATTGGA 60.369 47.826 0.00 0.00 0.00 3.53
241 243 6.433847 TCCTTTTGATTGGAGAGTCTACAA 57.566 37.500 20.15 20.15 38.79 2.41
266 268 3.987404 GTGGTGACCTCATGCCAC 58.013 61.111 2.11 2.69 43.52 5.01
300 302 2.948979 CACAAGGTAATGTGTGTGGTGT 59.051 45.455 0.00 0.00 44.46 4.16
347 349 4.338964 TGGTGGCACATGCAAGAATAATAG 59.661 41.667 20.82 0.00 44.52 1.73
399 401 0.036294 GTTAAGGAGCCGGTGAGCTT 60.036 55.000 1.90 0.00 45.15 3.74
426 429 2.581216 TGACGACTCTTCTAGTGGGT 57.419 50.000 0.00 0.00 39.07 4.51
465 468 0.105760 ATGGTTGTTGTCCCAGGCAA 60.106 50.000 0.00 0.00 33.39 4.52
487 490 0.103937 CTAGAGGGAAAGCCAGCTCG 59.896 60.000 0.00 0.00 35.15 5.03
522 525 2.835156 TGGTTTGACATCGGGACATCTA 59.165 45.455 0.00 0.00 0.00 1.98
525 528 1.775385 TGACATCGGGACATCTAGCA 58.225 50.000 0.00 0.00 0.00 3.49
533 536 1.471676 GGGACATCTAGCACTTGGTCG 60.472 57.143 0.00 0.00 0.00 4.79
534 537 1.476891 GGACATCTAGCACTTGGTCGA 59.523 52.381 0.00 0.00 0.00 4.20
536 539 1.478510 ACATCTAGCACTTGGTCGAGG 59.521 52.381 0.00 0.00 0.00 4.63
537 540 1.751351 CATCTAGCACTTGGTCGAGGA 59.249 52.381 0.00 0.00 0.00 3.71
538 541 2.145397 TCTAGCACTTGGTCGAGGAT 57.855 50.000 0.00 0.00 0.00 3.24
539 542 1.751351 TCTAGCACTTGGTCGAGGATG 59.249 52.381 0.00 0.00 0.00 3.51
597 601 1.633774 GGGATGATCCTCGGCTCTAA 58.366 55.000 11.87 0.00 36.57 2.10
620 624 4.225942 AGAGTCACAAGGATAAATGCCTCA 59.774 41.667 0.00 0.00 33.76 3.86
703 707 3.188786 GACCGTTAGCCGCAGCAG 61.189 66.667 0.00 0.00 43.56 4.24
737 741 6.319658 GCAAGATTTCCCAATGACTCTATTGA 59.680 38.462 0.00 0.00 39.79 2.57
738 742 7.014038 GCAAGATTTCCCAATGACTCTATTGAT 59.986 37.037 0.00 0.00 39.79 2.57
787 792 7.992180 TCTTTGAGAAAGAAACATGCTTTTC 57.008 32.000 0.00 0.00 44.10 2.29
802 807 4.973168 TGCTTTTCTTAGGCAGAGAAAGA 58.027 39.130 12.83 6.45 42.27 2.52
806 811 5.924475 TTTCTTAGGCAGAGAAAGAAACG 57.076 39.130 10.15 0.00 41.74 3.60
808 813 4.307432 TCTTAGGCAGAGAAAGAAACGTG 58.693 43.478 0.00 0.00 0.00 4.49
836 841 7.678194 TTTTTGCAATAGAGAAAGAAACACG 57.322 32.000 0.00 0.00 0.00 4.49
889 900 2.320805 TTTGTCTCGACTCGGTTACG 57.679 50.000 0.00 0.00 42.74 3.18
890 901 1.229428 TTGTCTCGACTCGGTTACGT 58.771 50.000 0.00 0.00 41.85 3.57
891 902 1.229428 TGTCTCGACTCGGTTACGTT 58.771 50.000 0.00 0.00 41.85 3.99
892 903 1.603802 TGTCTCGACTCGGTTACGTTT 59.396 47.619 0.00 0.00 41.85 3.60
893 904 2.033299 TGTCTCGACTCGGTTACGTTTT 59.967 45.455 0.00 0.00 41.85 2.43
894 905 3.045688 GTCTCGACTCGGTTACGTTTTT 58.954 45.455 0.00 0.00 41.85 1.94
937 948 7.148474 CCTCGATTTATTTTTGAGAAACCTCGA 60.148 37.037 0.00 0.00 33.42 4.04
940 951 8.015658 CGATTTATTTTTGAGAAACCTCGACTT 58.984 33.333 0.00 0.00 33.42 3.01
970 988 2.030946 GTGCGTGAGTAAATGAGATGGC 59.969 50.000 0.00 0.00 0.00 4.40
977 995 2.103263 AGTAAATGAGATGGCCCGAGAC 59.897 50.000 0.00 0.00 0.00 3.36
1005 1023 1.443702 GCCAACGCGTCCCATTTTC 60.444 57.895 14.44 0.00 0.00 2.29
1009 1028 0.250553 AACGCGTCCCATTTTCCTGA 60.251 50.000 14.44 0.00 0.00 3.86
1054 1073 4.169696 CGCCCCGAGCCCATGTAA 62.170 66.667 0.00 0.00 38.78 2.41
1055 1074 2.274104 GCCCCGAGCCCATGTAAA 59.726 61.111 0.00 0.00 34.35 2.01
1056 1075 2.119029 GCCCCGAGCCCATGTAAAC 61.119 63.158 0.00 0.00 34.35 2.01
1057 1076 1.453197 CCCCGAGCCCATGTAAACC 60.453 63.158 0.00 0.00 0.00 3.27
1058 1077 1.817941 CCCGAGCCCATGTAAACCG 60.818 63.158 0.00 0.00 0.00 4.44
1059 1078 2.469516 CCGAGCCCATGTAAACCGC 61.470 63.158 0.00 0.00 0.00 5.68
1060 1079 2.808958 CGAGCCCATGTAAACCGCG 61.809 63.158 0.00 0.00 0.00 6.46
1061 1080 1.743995 GAGCCCATGTAAACCGCGT 60.744 57.895 4.92 0.00 0.00 6.01
1062 1081 1.702491 GAGCCCATGTAAACCGCGTC 61.702 60.000 4.92 0.00 0.00 5.19
1063 1082 1.743995 GCCCATGTAAACCGCGTCT 60.744 57.895 4.92 0.00 0.00 4.18
1064 1083 0.460635 GCCCATGTAAACCGCGTCTA 60.461 55.000 4.92 0.00 0.00 2.59
1065 1084 1.567504 CCCATGTAAACCGCGTCTAG 58.432 55.000 4.92 0.00 0.00 2.43
1066 1085 1.135527 CCCATGTAAACCGCGTCTAGA 59.864 52.381 4.92 0.00 0.00 2.43
1067 1086 2.417651 CCCATGTAAACCGCGTCTAGAA 60.418 50.000 4.92 0.00 0.00 2.10
1068 1087 2.858344 CCATGTAAACCGCGTCTAGAAG 59.142 50.000 4.92 0.74 0.00 2.85
1069 1088 1.986698 TGTAAACCGCGTCTAGAAGC 58.013 50.000 19.34 19.34 0.00 3.86
1070 1089 1.275505 GTAAACCGCGTCTAGAAGCC 58.724 55.000 22.52 5.92 32.09 4.35
1071 1090 0.174162 TAAACCGCGTCTAGAAGCCC 59.826 55.000 22.52 0.00 32.09 5.19
1072 1091 1.542187 AAACCGCGTCTAGAAGCCCT 61.542 55.000 22.52 6.95 32.09 5.19
1073 1092 0.682209 AACCGCGTCTAGAAGCCCTA 60.682 55.000 22.52 0.00 32.09 3.53
1074 1093 0.682209 ACCGCGTCTAGAAGCCCTAA 60.682 55.000 22.52 0.00 32.09 2.69
1075 1094 0.458669 CCGCGTCTAGAAGCCCTAAA 59.541 55.000 22.52 0.00 32.09 1.85
1076 1095 1.134907 CCGCGTCTAGAAGCCCTAAAA 60.135 52.381 22.52 0.00 32.09 1.52
1077 1096 2.613691 CGCGTCTAGAAGCCCTAAAAA 58.386 47.619 22.52 0.00 32.09 1.94
1106 1125 1.296727 GGCGTCTAAAGAATTCCCGG 58.703 55.000 0.65 0.00 0.00 5.73
1154 1173 1.508088 CCCAAGCGCAACTCAATCC 59.492 57.895 11.47 0.00 0.00 3.01
1204 1224 1.016130 CGAGCTCGGAACACTTGCAT 61.016 55.000 28.40 0.00 35.37 3.96
1223 1243 0.954449 TCCTACTCGGATCGGATCGC 60.954 60.000 11.62 4.49 36.69 4.58
1225 1245 1.924320 CTACTCGGATCGGATCGCCC 61.924 65.000 11.62 0.00 0.00 6.13
1301 1587 5.163416 CCCCAAATCCTTACATGTCATTTCC 60.163 44.000 0.00 0.00 0.00 3.13
1320 1606 2.571653 TCCGATCCTCACCACTGAATTT 59.428 45.455 0.00 0.00 0.00 1.82
1322 1608 3.375299 CCGATCCTCACCACTGAATTTTC 59.625 47.826 0.00 0.00 0.00 2.29
1326 1612 1.812571 CTCACCACTGAATTTTCGGGG 59.187 52.381 4.28 0.00 37.89 5.73
1328 1614 1.960689 CACCACTGAATTTTCGGGGTT 59.039 47.619 4.28 0.00 35.97 4.11
1332 1618 3.119495 CCACTGAATTTTCGGGGTTCATC 60.119 47.826 4.28 0.00 35.14 2.92
1336 1622 3.446873 TGAATTTTCGGGGTTCATCCATG 59.553 43.478 0.00 0.00 38.11 3.66
1341 1627 2.166829 TCGGGGTTCATCCATGTTTTG 58.833 47.619 0.00 0.00 38.11 2.44
1367 1653 2.477863 GGCGATTTCATCTCGTTTTGGG 60.478 50.000 0.00 0.00 38.37 4.12
1371 1657 4.494199 CGATTTCATCTCGTTTTGGGCTAC 60.494 45.833 0.00 0.00 0.00 3.58
1376 1662 2.762745 TCTCGTTTTGGGCTACTTGTC 58.237 47.619 0.00 0.00 0.00 3.18
1386 1672 3.136809 TGGGCTACTTGTCCTGTTGTTTA 59.863 43.478 0.00 0.00 42.07 2.01
1398 1684 3.432252 CCTGTTGTTTAGGTAGTTGCTCG 59.568 47.826 0.00 0.00 0.00 5.03
1401 1687 1.345089 TGTTTAGGTAGTTGCTCGCCA 59.655 47.619 0.00 0.00 0.00 5.69
1432 1718 0.838122 ATCCTATTCTGGCTCGGGGG 60.838 60.000 0.00 0.00 0.00 5.40
1489 1775 1.040339 TTTGGGTCTTTTGCGTGCCT 61.040 50.000 0.00 0.00 0.00 4.75
1558 1844 8.674607 GTGTTGGGGATATAAACTCACTTTTAG 58.325 37.037 0.00 0.00 0.00 1.85
1560 1846 9.239551 GTTGGGGATATAAACTCACTTTTAGTT 57.760 33.333 0.00 0.00 38.82 2.24
1622 1908 3.871006 TGAGGTAATAGCAGCGTGATTTG 59.129 43.478 0.00 0.00 0.00 2.32
1626 1921 1.290203 ATAGCAGCGTGATTTGTCCG 58.710 50.000 0.00 0.00 0.00 4.79
1627 1922 0.037697 TAGCAGCGTGATTTGTCCGT 60.038 50.000 0.00 0.00 0.00 4.69
1628 1923 1.132640 GCAGCGTGATTTGTCCGTC 59.867 57.895 0.00 0.00 0.00 4.79
1629 1924 1.416049 CAGCGTGATTTGTCCGTCG 59.584 57.895 0.00 0.00 0.00 5.12
1630 1925 1.006571 AGCGTGATTTGTCCGTCGT 60.007 52.632 0.00 0.00 0.00 4.34
1631 1926 1.129809 GCGTGATTTGTCCGTCGTG 59.870 57.895 0.00 0.00 0.00 4.35
1632 1927 1.779061 CGTGATTTGTCCGTCGTGG 59.221 57.895 0.00 0.00 40.09 4.94
1633 1928 1.495951 GTGATTTGTCCGTCGTGGC 59.504 57.895 0.00 0.00 37.80 5.01
1651 1946 3.885297 GTGGCATTCATAACATGTAGGCT 59.115 43.478 0.00 0.00 37.48 4.58
1656 1951 6.918022 GGCATTCATAACATGTAGGCTTAAAC 59.082 38.462 0.00 0.00 37.48 2.01
1670 1965 6.870971 AGGCTTAAACACGAAAGAACATAA 57.129 33.333 0.00 0.00 0.00 1.90
1714 2009 1.276421 AGCGGTGCTACTGAATTGAGT 59.724 47.619 2.35 2.35 36.99 3.41
1715 2010 2.076863 GCGGTGCTACTGAATTGAGTT 58.923 47.619 1.98 0.00 0.00 3.01
1716 2011 2.159653 GCGGTGCTACTGAATTGAGTTG 60.160 50.000 1.98 2.20 0.00 3.16
1717 2012 3.325870 CGGTGCTACTGAATTGAGTTGA 58.674 45.455 10.36 0.00 0.00 3.18
1718 2013 3.369147 CGGTGCTACTGAATTGAGTTGAG 59.631 47.826 10.36 0.98 0.00 3.02
1719 2014 3.126000 GGTGCTACTGAATTGAGTTGAGC 59.874 47.826 11.56 11.56 30.97 4.26
1720 2015 3.748048 GTGCTACTGAATTGAGTTGAGCA 59.252 43.478 15.78 15.78 35.92 4.26
1721 2016 4.214119 GTGCTACTGAATTGAGTTGAGCAA 59.786 41.667 19.80 6.14 38.61 3.91
1722 2017 4.453478 TGCTACTGAATTGAGTTGAGCAAG 59.547 41.667 16.97 3.54 35.54 4.01
1723 2018 4.692625 GCTACTGAATTGAGTTGAGCAAGA 59.307 41.667 13.08 0.00 30.77 3.02
1724 2019 5.163874 GCTACTGAATTGAGTTGAGCAAGAG 60.164 44.000 13.08 0.10 30.77 2.85
1808 2153 6.528321 TGATATCTTTGATCGGATGCTTCTT 58.472 36.000 3.98 0.00 0.00 2.52
1847 2200 6.742999 TGTAATACTGTAGCGAAATTAGCG 57.257 37.500 0.00 0.00 40.04 4.26
1872 2225 7.092716 GTCTTGATCACACTTTTATGCCATTT 58.907 34.615 0.00 0.00 0.00 2.32
1873 2226 8.243426 GTCTTGATCACACTTTTATGCCATTTA 58.757 33.333 0.00 0.00 0.00 1.40
2113 2478 3.696898 TGTTGTTTACATTTCACACGCC 58.303 40.909 0.00 0.00 0.00 5.68
2452 4471 0.318784 AGTTGCCTTCAGACGACGAC 60.319 55.000 0.00 0.00 0.00 4.34
2648 4667 6.216569 TCTAGTTTCAGCTTGTCTGTAAGTG 58.783 40.000 0.00 0.00 43.32 3.16
2738 4759 2.011617 GCCCCATATGGCCTGGAACT 62.012 60.000 16.97 0.00 46.11 3.01
2962 4988 8.016229 CACTCAGATGTGATTCTCTTTCTTTTG 58.984 37.037 0.00 0.00 40.12 2.44
3036 5062 0.829182 AGCTGAAAACAAGGGCAGGG 60.829 55.000 0.00 0.00 0.00 4.45
3131 5158 2.946990 CTGGCACATCATATCAACAGCA 59.053 45.455 0.00 0.00 38.20 4.41
3230 5257 1.616628 GGAGTGGTGGAGATGGGGT 60.617 63.158 0.00 0.00 0.00 4.95
3566 5593 7.518529 GCAGAACTTGAGTGAAGGTTTTACTAC 60.519 40.741 0.00 0.00 35.78 2.73
3614 5641 8.877864 AACCCTTATTCATGTTGTTTCTGATA 57.122 30.769 0.00 0.00 0.00 2.15
3731 5761 4.742438 AAACATGCTTAACAGTGGTACG 57.258 40.909 0.00 0.00 0.00 3.67
3732 5762 3.396260 ACATGCTTAACAGTGGTACGT 57.604 42.857 0.00 0.00 0.00 3.57
3737 5767 2.289257 GCTTAACAGTGGTACGTCCCTT 60.289 50.000 0.00 0.00 34.77 3.95
3738 5768 3.582780 CTTAACAGTGGTACGTCCCTTC 58.417 50.000 0.00 0.00 34.77 3.46
3748 5778 0.969894 ACGTCCCTTCTCTCTGTTGG 59.030 55.000 0.00 0.00 0.00 3.77
3843 5873 3.067180 AGGTCATCAACAAGTTGCAACTG 59.933 43.478 31.73 25.08 39.66 3.16
3925 5956 5.814783 GCATCAGCTTTATTAGACCTGTTG 58.185 41.667 0.00 0.00 37.91 3.33
3942 5973 4.633565 CCTGTTGATAAAGACCTGAGAAGC 59.366 45.833 0.00 0.00 0.00 3.86
4033 6064 9.236006 AGTTATCTTTCTACGTTAGTAACCTGA 57.764 33.333 7.45 1.09 31.59 3.86
4218 6309 2.872245 ACAATATCGTGGCTCCATTTCG 59.128 45.455 0.00 0.00 0.00 3.46
4490 6756 8.827177 AACTTCTGTTTACAAGAACGATCATA 57.173 30.769 0.00 0.00 31.37 2.15
4531 6840 3.281727 ACTATGTTGGCACTATGGTGG 57.718 47.619 11.53 0.00 43.18 4.61
4583 6892 3.075884 CCAAAGCAATCCCACCAATTTG 58.924 45.455 0.00 0.00 0.00 2.32
4728 7040 9.159364 CATCATTGTGAGTATATGGATTGTAGG 57.841 37.037 0.00 0.00 0.00 3.18
4882 7196 3.792124 GCGGAGTGCATAATAAAGGCAAC 60.792 47.826 0.00 0.00 45.45 4.17
4929 7243 8.276252 TGAAATAAACAACTATGACTAAGGGC 57.724 34.615 0.00 0.00 0.00 5.19
4930 7244 7.338449 TGAAATAAACAACTATGACTAAGGGCC 59.662 37.037 0.00 0.00 0.00 5.80
4931 7245 3.646736 AACAACTATGACTAAGGGCCC 57.353 47.619 16.46 16.46 0.00 5.80
4932 7246 1.485066 ACAACTATGACTAAGGGCCCG 59.515 52.381 18.44 4.53 0.00 6.13
4933 7247 1.485066 CAACTATGACTAAGGGCCCGT 59.515 52.381 18.44 17.51 0.00 5.28
4934 7248 1.875488 ACTATGACTAAGGGCCCGTT 58.125 50.000 17.88 13.55 0.00 4.44
4935 7249 1.761198 ACTATGACTAAGGGCCCGTTC 59.239 52.381 17.88 9.20 0.00 3.95
4936 7250 0.748450 TATGACTAAGGGCCCGTTCG 59.252 55.000 17.88 10.40 0.00 3.95
4937 7251 1.968050 ATGACTAAGGGCCCGTTCGG 61.968 60.000 17.88 9.42 0.00 4.30
4938 7252 2.284112 ACTAAGGGCCCGTTCGGA 60.284 61.111 17.88 0.00 0.00 4.55
4939 7253 1.683418 GACTAAGGGCCCGTTCGGAT 61.683 60.000 17.88 0.00 0.00 4.18
4940 7254 1.269703 ACTAAGGGCCCGTTCGGATT 61.270 55.000 17.88 5.33 0.00 3.01
4941 7255 0.532196 CTAAGGGCCCGTTCGGATTC 60.532 60.000 17.88 1.74 0.00 2.52
4942 7256 1.974973 TAAGGGCCCGTTCGGATTCC 61.975 60.000 17.88 10.33 0.00 3.01
4943 7257 3.793888 GGGCCCGTTCGGATTCCT 61.794 66.667 5.69 0.00 0.00 3.36
4944 7258 2.271173 GGCCCGTTCGGATTCCTT 59.729 61.111 13.08 0.00 0.00 3.36
4945 7259 1.818363 GGCCCGTTCGGATTCCTTC 60.818 63.158 13.08 0.00 0.00 3.46
4946 7260 1.818363 GCCCGTTCGGATTCCTTCC 60.818 63.158 13.08 0.00 41.59 3.46
4947 7261 1.153229 CCCGTTCGGATTCCTTCCC 60.153 63.158 13.08 0.00 42.06 3.97
4948 7262 1.153229 CCGTTCGGATTCCTTCCCC 60.153 63.158 5.19 0.00 42.06 4.81
4949 7263 1.623542 CCGTTCGGATTCCTTCCCCT 61.624 60.000 5.19 0.00 42.06 4.79
4950 7264 0.179081 CGTTCGGATTCCTTCCCCTC 60.179 60.000 0.30 0.00 42.06 4.30
4951 7265 0.180642 GTTCGGATTCCTTCCCCTCC 59.819 60.000 0.30 0.00 42.06 4.30
4952 7266 0.252974 TTCGGATTCCTTCCCCTCCA 60.253 55.000 0.30 0.00 42.06 3.86
4953 7267 0.981277 TCGGATTCCTTCCCCTCCAC 60.981 60.000 0.30 0.00 42.06 4.02
4954 7268 1.271840 CGGATTCCTTCCCCTCCACA 61.272 60.000 0.30 0.00 42.06 4.17
4955 7269 0.999712 GGATTCCTTCCCCTCCACAA 59.000 55.000 0.00 0.00 38.75 3.33
4956 7270 1.341089 GGATTCCTTCCCCTCCACAAC 60.341 57.143 0.00 0.00 38.75 3.32
4957 7271 1.636003 GATTCCTTCCCCTCCACAACT 59.364 52.381 0.00 0.00 0.00 3.16
4958 7272 1.064825 TTCCTTCCCCTCCACAACTC 58.935 55.000 0.00 0.00 0.00 3.01
4959 7273 0.193574 TCCTTCCCCTCCACAACTCT 59.806 55.000 0.00 0.00 0.00 3.24
4960 7274 0.326264 CCTTCCCCTCCACAACTCTG 59.674 60.000 0.00 0.00 0.00 3.35
4961 7275 0.322008 CTTCCCCTCCACAACTCTGC 60.322 60.000 0.00 0.00 0.00 4.26
4962 7276 0.768221 TTCCCCTCCACAACTCTGCT 60.768 55.000 0.00 0.00 0.00 4.24
4963 7277 1.194781 TCCCCTCCACAACTCTGCTC 61.195 60.000 0.00 0.00 0.00 4.26
4964 7278 1.298014 CCCTCCACAACTCTGCTCC 59.702 63.158 0.00 0.00 0.00 4.70
4965 7279 1.298014 CCTCCACAACTCTGCTCCC 59.702 63.158 0.00 0.00 0.00 4.30
4966 7280 1.079543 CTCCACAACTCTGCTCCCG 60.080 63.158 0.00 0.00 0.00 5.14
4967 7281 2.046892 CCACAACTCTGCTCCCGG 60.047 66.667 0.00 0.00 0.00 5.73
4968 7282 2.583441 CCACAACTCTGCTCCCGGA 61.583 63.158 0.73 0.00 0.00 5.14
4978 7292 2.837291 CTCCCGGAGCTGGAGGAG 60.837 72.222 0.73 8.97 44.73 3.69
4986 7300 4.400961 GCTGGAGGAGCGGCAGTT 62.401 66.667 1.45 0.00 38.15 3.16
4987 7301 2.125350 CTGGAGGAGCGGCAGTTC 60.125 66.667 1.45 0.00 0.00 3.01
4988 7302 2.922503 TGGAGGAGCGGCAGTTCA 60.923 61.111 1.45 0.00 0.00 3.18
4989 7303 2.347490 GGAGGAGCGGCAGTTCAA 59.653 61.111 1.45 0.00 0.00 2.69
4990 7304 1.302511 GGAGGAGCGGCAGTTCAAA 60.303 57.895 1.45 0.00 0.00 2.69
4991 7305 0.889186 GGAGGAGCGGCAGTTCAAAA 60.889 55.000 1.45 0.00 0.00 2.44
4992 7306 1.168714 GAGGAGCGGCAGTTCAAAAT 58.831 50.000 1.45 0.00 0.00 1.82
4993 7307 1.131315 GAGGAGCGGCAGTTCAAAATC 59.869 52.381 1.45 0.00 0.00 2.17
4994 7308 0.179189 GGAGCGGCAGTTCAAAATCG 60.179 55.000 1.45 0.00 0.00 3.34
4995 7309 0.517316 GAGCGGCAGTTCAAAATCGT 59.483 50.000 1.45 0.00 0.00 3.73
4996 7310 0.238289 AGCGGCAGTTCAAAATCGTG 59.762 50.000 1.45 0.00 0.00 4.35
4997 7311 0.729140 GCGGCAGTTCAAAATCGTGG 60.729 55.000 0.00 0.00 0.00 4.94
4998 7312 0.871722 CGGCAGTTCAAAATCGTGGA 59.128 50.000 0.00 0.00 0.00 4.02
4999 7313 1.135972 CGGCAGTTCAAAATCGTGGAG 60.136 52.381 0.00 0.00 0.00 3.86
5000 7314 1.880027 GGCAGTTCAAAATCGTGGAGT 59.120 47.619 0.00 0.00 0.00 3.85
5001 7315 2.350772 GGCAGTTCAAAATCGTGGAGTG 60.351 50.000 0.00 0.00 31.43 3.51
5002 7316 2.350772 GCAGTTCAAAATCGTGGAGTGG 60.351 50.000 0.00 0.00 29.25 4.00
5003 7317 2.226437 CAGTTCAAAATCGTGGAGTGGG 59.774 50.000 0.00 0.00 0.00 4.61
5004 7318 1.539827 GTTCAAAATCGTGGAGTGGGG 59.460 52.381 0.00 0.00 0.00 4.96
5005 7319 1.060729 TCAAAATCGTGGAGTGGGGA 58.939 50.000 0.00 0.00 0.00 4.81
5006 7320 1.422024 TCAAAATCGTGGAGTGGGGAA 59.578 47.619 0.00 0.00 0.00 3.97
5007 7321 1.812571 CAAAATCGTGGAGTGGGGAAG 59.187 52.381 0.00 0.00 0.00 3.46
5008 7322 0.328258 AAATCGTGGAGTGGGGAAGG 59.672 55.000 0.00 0.00 0.00 3.46
5009 7323 0.546747 AATCGTGGAGTGGGGAAGGA 60.547 55.000 0.00 0.00 0.00 3.36
5010 7324 0.978146 ATCGTGGAGTGGGGAAGGAG 60.978 60.000 0.00 0.00 0.00 3.69
5011 7325 2.660064 CGTGGAGTGGGGAAGGAGG 61.660 68.421 0.00 0.00 0.00 4.30
5012 7326 1.539124 GTGGAGTGGGGAAGGAGGT 60.539 63.158 0.00 0.00 0.00 3.85
5013 7327 1.538876 TGGAGTGGGGAAGGAGGTG 60.539 63.158 0.00 0.00 0.00 4.00
5014 7328 2.671682 GAGTGGGGAAGGAGGTGC 59.328 66.667 0.00 0.00 0.00 5.01
5015 7329 1.920835 GAGTGGGGAAGGAGGTGCT 60.921 63.158 0.00 0.00 0.00 4.40
5016 7330 1.904990 GAGTGGGGAAGGAGGTGCTC 61.905 65.000 0.00 0.00 0.00 4.26
5027 7341 2.307934 GAGGTGCTCCACAGATTCTC 57.692 55.000 7.70 0.00 35.86 2.87
5028 7342 1.830477 GAGGTGCTCCACAGATTCTCT 59.170 52.381 7.70 0.00 35.86 3.10
5029 7343 3.027412 GAGGTGCTCCACAGATTCTCTA 58.973 50.000 7.70 0.00 35.86 2.43
5030 7344 3.445008 AGGTGCTCCACAGATTCTCTAA 58.555 45.455 7.70 0.00 35.86 2.10
5031 7345 4.036518 AGGTGCTCCACAGATTCTCTAAT 58.963 43.478 7.70 0.00 35.86 1.73
5032 7346 4.472833 AGGTGCTCCACAGATTCTCTAATT 59.527 41.667 7.70 0.00 35.86 1.40
5033 7347 5.045286 AGGTGCTCCACAGATTCTCTAATTT 60.045 40.000 7.70 0.00 35.86 1.82
5034 7348 5.295540 GGTGCTCCACAGATTCTCTAATTTC 59.704 44.000 0.00 0.00 35.86 2.17
5035 7349 5.877012 GTGCTCCACAGATTCTCTAATTTCA 59.123 40.000 0.00 0.00 34.08 2.69
5036 7350 5.877012 TGCTCCACAGATTCTCTAATTTCAC 59.123 40.000 0.00 0.00 0.00 3.18
5037 7351 5.006165 GCTCCACAGATTCTCTAATTTCACG 59.994 44.000 0.00 0.00 0.00 4.35
5038 7352 5.419542 TCCACAGATTCTCTAATTTCACGG 58.580 41.667 0.00 0.00 0.00 4.94
5039 7353 5.186992 TCCACAGATTCTCTAATTTCACGGA 59.813 40.000 0.00 0.00 0.00 4.69
5040 7354 5.521735 CCACAGATTCTCTAATTTCACGGAG 59.478 44.000 0.00 0.00 0.00 4.63
5041 7355 5.006165 CACAGATTCTCTAATTTCACGGAGC 59.994 44.000 0.00 0.00 0.00 4.70
5042 7356 4.208047 CAGATTCTCTAATTTCACGGAGCG 59.792 45.833 0.00 0.00 0.00 5.03
5043 7357 2.579207 TCTCTAATTTCACGGAGCGG 57.421 50.000 0.00 0.00 0.00 5.52
5044 7358 2.097036 TCTCTAATTTCACGGAGCGGA 58.903 47.619 0.00 0.00 0.00 5.54
5045 7359 2.494471 TCTCTAATTTCACGGAGCGGAA 59.506 45.455 0.00 0.00 0.00 4.30
5046 7360 2.860735 CTCTAATTTCACGGAGCGGAAG 59.139 50.000 0.00 0.00 0.00 3.46
5047 7361 1.933853 CTAATTTCACGGAGCGGAAGG 59.066 52.381 0.00 0.00 0.00 3.46
5048 7362 0.323629 AATTTCACGGAGCGGAAGGA 59.676 50.000 0.00 0.00 0.00 3.36
5049 7363 0.541863 ATTTCACGGAGCGGAAGGAT 59.458 50.000 0.00 0.00 0.00 3.24
5050 7364 0.323629 TTTCACGGAGCGGAAGGATT 59.676 50.000 0.00 0.00 0.00 3.01
5051 7365 1.187974 TTCACGGAGCGGAAGGATTA 58.812 50.000 0.00 0.00 0.00 1.75
5052 7366 0.458669 TCACGGAGCGGAAGGATTAC 59.541 55.000 0.00 0.00 0.00 1.89
5053 7367 0.529992 CACGGAGCGGAAGGATTACC 60.530 60.000 0.00 0.00 0.00 2.85
5061 7375 2.034104 GGAAGGATTACCGAACACCC 57.966 55.000 0.00 0.00 41.83 4.61
5062 7376 1.407851 GGAAGGATTACCGAACACCCC 60.408 57.143 0.00 0.00 41.83 4.95
5063 7377 1.558294 GAAGGATTACCGAACACCCCT 59.442 52.381 0.00 0.00 41.83 4.79
5081 7395 3.753797 CCCCTTAAGTTGACTTCTTCTGC 59.246 47.826 0.97 0.00 37.40 4.26
5082 7396 4.505742 CCCCTTAAGTTGACTTCTTCTGCT 60.506 45.833 0.97 0.00 37.40 4.24
5083 7397 4.453819 CCCTTAAGTTGACTTCTTCTGCTG 59.546 45.833 0.97 0.00 37.40 4.41
5156 7588 3.209410 CCACTAATGCCAGAGAACATCC 58.791 50.000 0.00 0.00 0.00 3.51
5158 7590 2.501723 ACTAATGCCAGAGAACATCCGT 59.498 45.455 0.00 0.00 0.00 4.69
5164 7596 2.037772 GCCAGAGAACATCCGTCCATAT 59.962 50.000 0.00 0.00 0.00 1.78
5186 7618 0.459489 GCACAAGCCAAAACACAGGA 59.541 50.000 0.00 0.00 33.58 3.86
5216 7648 5.182760 ACAGAAAAGCAAGTCATGGATCTTC 59.817 40.000 0.00 0.00 0.00 2.87
5225 7657 6.094603 GCAAGTCATGGATCTTCTACAAACAT 59.905 38.462 0.00 0.00 0.00 2.71
5263 7695 1.918262 TCCAGTCCATTTGCATCTCCT 59.082 47.619 0.00 0.00 0.00 3.69
5297 7729 4.456911 TCAAGAAGAAAGATGTCACATGGC 59.543 41.667 0.00 0.00 0.00 4.40
5304 7736 2.216046 AGATGTCACATGGCGCTTATG 58.784 47.619 18.97 18.97 0.00 1.90
5305 7737 0.664761 ATGTCACATGGCGCTTATGC 59.335 50.000 20.02 8.82 0.00 3.14
5317 7749 3.250762 GGCGCTTATGCACAGATTATCAA 59.749 43.478 7.64 0.00 39.64 2.57
5336 7768 0.179032 ACACCTCAACGCCATGACAA 60.179 50.000 0.00 0.00 0.00 3.18
5352 7784 6.570764 GCCATGACAATGATTGCCAAATTTTT 60.571 34.615 4.84 0.00 35.67 1.94
5380 7812 5.679382 GCCAATCATCGAACATTTGATGGAA 60.679 40.000 17.91 4.46 45.21 3.53
5464 7896 1.149627 GGCACAAGGGGTACACACA 59.850 57.895 0.00 0.00 0.00 3.72
5475 7907 4.098807 AGGGGTACACACAACAAAATTGAC 59.901 41.667 0.00 0.00 0.00 3.18
5535 7967 1.003223 GTTGCGTAGAAAAGCGTTGGT 60.003 47.619 0.00 0.00 35.87 3.67
5543 7975 3.769536 AGAAAAGCGTTGGTGAAAGTTG 58.230 40.909 0.00 0.00 0.00 3.16
5603 8035 9.545105 ACAAGATCAAATGTAAATTTTGCTTGA 57.455 25.926 20.66 5.82 36.88 3.02
5616 8048 3.383620 TTGCTTGATCGCAATTGGTTT 57.616 38.095 7.72 0.00 44.30 3.27
5627 8059 4.214545 TCGCAATTGGTTTGAGTCGTAATT 59.785 37.500 7.72 0.00 37.53 1.40
5633 8065 2.418976 GGTTTGAGTCGTAATTGGCTCC 59.581 50.000 0.00 0.00 0.00 4.70
5648 8080 2.569853 TGGCTCCTCAAATCCGAAAGTA 59.430 45.455 0.00 0.00 0.00 2.24
5679 8111 3.368921 AATGGGTAGCCCTATCCTCTT 57.631 47.619 8.85 0.00 45.70 2.85
5681 8113 1.866943 TGGGTAGCCCTATCCTCTTCT 59.133 52.381 8.85 0.00 45.70 2.85
5682 8114 2.158295 TGGGTAGCCCTATCCTCTTCTC 60.158 54.545 8.85 0.00 45.70 2.87
5693 8125 7.216494 CCCTATCCTCTTCTCTTGAGATTTTC 58.784 42.308 0.82 0.00 33.68 2.29
5717 8149 8.613060 TCTTATTCAACTAGATCATTGATGGC 57.387 34.615 3.32 0.00 34.87 4.40
5718 8150 5.936686 ATTCAACTAGATCATTGATGGCG 57.063 39.130 3.32 0.00 34.87 5.69
5719 8151 4.406648 TCAACTAGATCATTGATGGCGT 57.593 40.909 3.32 0.00 29.89 5.68
5720 8152 4.122046 TCAACTAGATCATTGATGGCGTG 58.878 43.478 3.32 0.00 29.89 5.34
5721 8153 2.487934 ACTAGATCATTGATGGCGTGC 58.512 47.619 3.32 0.00 0.00 5.34
5722 8154 2.158914 ACTAGATCATTGATGGCGTGCA 60.159 45.455 3.32 0.00 0.00 4.57
5723 8155 1.977056 AGATCATTGATGGCGTGCAT 58.023 45.000 3.32 0.00 0.00 3.96
5724 8156 2.304092 AGATCATTGATGGCGTGCATT 58.696 42.857 3.32 0.00 0.00 3.56
5725 8157 2.034179 AGATCATTGATGGCGTGCATTG 59.966 45.455 3.32 0.00 0.00 2.82
5726 8158 0.179132 TCATTGATGGCGTGCATTGC 60.179 50.000 0.46 0.46 0.00 3.56
5737 8169 3.747976 GCATTGCCTCGCCCGTTT 61.748 61.111 0.00 0.00 0.00 3.60
5738 8170 2.403378 GCATTGCCTCGCCCGTTTA 61.403 57.895 0.00 0.00 0.00 2.01
5739 8171 1.721487 CATTGCCTCGCCCGTTTAG 59.279 57.895 0.00 0.00 0.00 1.85
5740 8172 1.024579 CATTGCCTCGCCCGTTTAGT 61.025 55.000 0.00 0.00 0.00 2.24
5741 8173 0.322187 ATTGCCTCGCCCGTTTAGTT 60.322 50.000 0.00 0.00 0.00 2.24
5742 8174 0.952010 TTGCCTCGCCCGTTTAGTTC 60.952 55.000 0.00 0.00 0.00 3.01
5743 8175 2.450345 GCCTCGCCCGTTTAGTTCG 61.450 63.158 0.00 0.00 0.00 3.95
5744 8176 1.213537 CCTCGCCCGTTTAGTTCGA 59.786 57.895 0.00 0.00 0.00 3.71
5745 8177 1.074872 CCTCGCCCGTTTAGTTCGAC 61.075 60.000 0.00 0.00 0.00 4.20
5746 8178 1.074872 CTCGCCCGTTTAGTTCGACC 61.075 60.000 0.00 0.00 0.00 4.79
5747 8179 1.080298 CGCCCGTTTAGTTCGACCT 60.080 57.895 0.00 0.00 0.00 3.85
5748 8180 0.171007 CGCCCGTTTAGTTCGACCTA 59.829 55.000 0.00 0.00 0.00 3.08
5749 8181 1.202336 CGCCCGTTTAGTTCGACCTAT 60.202 52.381 0.00 0.00 0.00 2.57
5750 8182 2.033299 CGCCCGTTTAGTTCGACCTATA 59.967 50.000 0.00 0.00 0.00 1.31
5751 8183 3.304928 CGCCCGTTTAGTTCGACCTATAT 60.305 47.826 0.00 0.00 0.00 0.86
5752 8184 4.625028 GCCCGTTTAGTTCGACCTATATT 58.375 43.478 0.00 0.00 0.00 1.28
5753 8185 5.052481 GCCCGTTTAGTTCGACCTATATTT 58.948 41.667 0.00 0.00 0.00 1.40
5754 8186 5.050567 GCCCGTTTAGTTCGACCTATATTTG 60.051 44.000 0.00 0.00 0.00 2.32
5755 8187 5.050567 CCCGTTTAGTTCGACCTATATTTGC 60.051 44.000 0.00 0.00 0.00 3.68
5756 8188 5.751990 CCGTTTAGTTCGACCTATATTTGCT 59.248 40.000 0.00 0.00 0.00 3.91
5757 8189 6.919662 CCGTTTAGTTCGACCTATATTTGCTA 59.080 38.462 0.00 0.00 0.00 3.49
5758 8190 7.597743 CCGTTTAGTTCGACCTATATTTGCTAT 59.402 37.037 0.00 0.00 0.00 2.97
5759 8191 9.616634 CGTTTAGTTCGACCTATATTTGCTATA 57.383 33.333 0.00 0.00 0.00 1.31
5764 8196 9.293404 AGTTCGACCTATATTTGCTATACTACA 57.707 33.333 0.00 0.00 0.00 2.74
5765 8197 9.903682 GTTCGACCTATATTTGCTATACTACAA 57.096 33.333 0.00 0.00 0.00 2.41
5768 8200 9.909644 CGACCTATATTTGCTATACTACAAAGT 57.090 33.333 0.00 0.00 39.01 2.66
5804 8236 9.651913 ACATTTGTTTGAAGTATTGTGTTTTCT 57.348 25.926 0.00 0.00 0.00 2.52
5807 8239 9.482627 TTTGTTTGAAGTATTGTGTTTTCTTGT 57.517 25.926 0.00 0.00 0.00 3.16
5808 8240 8.459521 TGTTTGAAGTATTGTGTTTTCTTGTG 57.540 30.769 0.00 0.00 0.00 3.33
5809 8241 7.543868 TGTTTGAAGTATTGTGTTTTCTTGTGG 59.456 33.333 0.00 0.00 0.00 4.17
5810 8242 5.587289 TGAAGTATTGTGTTTTCTTGTGGC 58.413 37.500 0.00 0.00 0.00 5.01
5811 8243 5.359576 TGAAGTATTGTGTTTTCTTGTGGCT 59.640 36.000 0.00 0.00 0.00 4.75
5812 8244 5.852282 AGTATTGTGTTTTCTTGTGGCTT 57.148 34.783 0.00 0.00 0.00 4.35
5813 8245 5.591099 AGTATTGTGTTTTCTTGTGGCTTG 58.409 37.500 0.00 0.00 0.00 4.01
5814 8246 3.951775 TTGTGTTTTCTTGTGGCTTGT 57.048 38.095 0.00 0.00 0.00 3.16
5815 8247 3.229276 TGTGTTTTCTTGTGGCTTGTG 57.771 42.857 0.00 0.00 0.00 3.33
5816 8248 2.094286 TGTGTTTTCTTGTGGCTTGTGG 60.094 45.455 0.00 0.00 0.00 4.17
5817 8249 2.094234 GTGTTTTCTTGTGGCTTGTGGT 60.094 45.455 0.00 0.00 0.00 4.16
5818 8250 2.564947 TGTTTTCTTGTGGCTTGTGGTT 59.435 40.909 0.00 0.00 0.00 3.67
5819 8251 3.764434 TGTTTTCTTGTGGCTTGTGGTTA 59.236 39.130 0.00 0.00 0.00 2.85
5820 8252 4.404073 TGTTTTCTTGTGGCTTGTGGTTAT 59.596 37.500 0.00 0.00 0.00 1.89
5821 8253 5.105146 TGTTTTCTTGTGGCTTGTGGTTATT 60.105 36.000 0.00 0.00 0.00 1.40
5822 8254 5.606348 TTTCTTGTGGCTTGTGGTTATTT 57.394 34.783 0.00 0.00 0.00 1.40
5823 8255 4.846779 TCTTGTGGCTTGTGGTTATTTC 57.153 40.909 0.00 0.00 0.00 2.17
5824 8256 3.572255 TCTTGTGGCTTGTGGTTATTTCC 59.428 43.478 0.00 0.00 0.00 3.13
5825 8257 3.237268 TGTGGCTTGTGGTTATTTCCT 57.763 42.857 0.00 0.00 0.00 3.36
5826 8258 2.890311 TGTGGCTTGTGGTTATTTCCTG 59.110 45.455 0.00 0.00 0.00 3.86
5827 8259 2.890945 GTGGCTTGTGGTTATTTCCTGT 59.109 45.455 0.00 0.00 0.00 4.00
5828 8260 4.076394 GTGGCTTGTGGTTATTTCCTGTA 58.924 43.478 0.00 0.00 0.00 2.74
5829 8261 4.521256 GTGGCTTGTGGTTATTTCCTGTAA 59.479 41.667 0.00 0.00 0.00 2.41
5830 8262 4.521256 TGGCTTGTGGTTATTTCCTGTAAC 59.479 41.667 0.00 0.00 0.00 2.50
5831 8263 4.521256 GGCTTGTGGTTATTTCCTGTAACA 59.479 41.667 0.00 0.00 34.51 2.41
5832 8264 5.458015 GCTTGTGGTTATTTCCTGTAACAC 58.542 41.667 0.00 0.00 34.51 3.32
5833 8265 5.564063 GCTTGTGGTTATTTCCTGTAACACC 60.564 44.000 0.00 0.00 34.51 4.16
5834 8266 4.400120 TGTGGTTATTTCCTGTAACACCC 58.600 43.478 0.00 0.00 34.51 4.61
5835 8267 4.141228 TGTGGTTATTTCCTGTAACACCCA 60.141 41.667 0.00 0.00 34.51 4.51
5836 8268 4.216902 GTGGTTATTTCCTGTAACACCCAC 59.783 45.833 0.00 0.00 34.51 4.61
5837 8269 3.437741 GGTTATTTCCTGTAACACCCACG 59.562 47.826 0.00 0.00 34.51 4.94
5838 8270 4.317488 GTTATTTCCTGTAACACCCACGA 58.683 43.478 0.00 0.00 33.36 4.35
5839 8271 3.713826 ATTTCCTGTAACACCCACGAT 57.286 42.857 0.00 0.00 0.00 3.73
5840 8272 2.465860 TTCCTGTAACACCCACGATG 57.534 50.000 0.00 0.00 0.00 3.84
5841 8273 0.036765 TCCTGTAACACCCACGATGC 60.037 55.000 0.00 0.00 0.00 3.91
5842 8274 1.358725 CCTGTAACACCCACGATGCG 61.359 60.000 0.00 0.00 0.00 4.73
5843 8275 0.389296 CTGTAACACCCACGATGCGA 60.389 55.000 0.00 0.00 0.00 5.10
5844 8276 0.668096 TGTAACACCCACGATGCGAC 60.668 55.000 0.00 0.00 0.00 5.19
5845 8277 0.389426 GTAACACCCACGATGCGACT 60.389 55.000 0.00 0.00 0.00 4.18
5846 8278 1.135315 GTAACACCCACGATGCGACTA 60.135 52.381 0.00 0.00 0.00 2.59
5847 8279 0.535335 AACACCCACGATGCGACTAT 59.465 50.000 0.00 0.00 0.00 2.12
5848 8280 1.395635 ACACCCACGATGCGACTATA 58.604 50.000 0.00 0.00 0.00 1.31
5849 8281 1.961394 ACACCCACGATGCGACTATAT 59.039 47.619 0.00 0.00 0.00 0.86
5850 8282 2.030185 ACACCCACGATGCGACTATATC 60.030 50.000 0.00 0.00 0.00 1.63
5851 8283 2.229062 CACCCACGATGCGACTATATCT 59.771 50.000 0.00 0.00 0.00 1.98
5852 8284 2.488545 ACCCACGATGCGACTATATCTC 59.511 50.000 0.00 0.00 0.00 2.75
5853 8285 2.488153 CCCACGATGCGACTATATCTCA 59.512 50.000 0.00 0.00 0.00 3.27
5854 8286 3.493272 CCACGATGCGACTATATCTCAC 58.507 50.000 0.00 0.00 0.00 3.51
5855 8287 3.058224 CCACGATGCGACTATATCTCACA 60.058 47.826 0.00 0.00 0.00 3.58
5856 8288 3.908978 CACGATGCGACTATATCTCACAC 59.091 47.826 0.00 0.00 0.00 3.82
5857 8289 3.156753 CGATGCGACTATATCTCACACG 58.843 50.000 0.00 0.00 0.00 4.49
5858 8290 3.364068 CGATGCGACTATATCTCACACGT 60.364 47.826 0.00 0.00 0.00 4.49
5859 8291 3.334272 TGCGACTATATCTCACACGTG 57.666 47.619 15.48 15.48 0.00 4.49
5860 8292 2.681344 TGCGACTATATCTCACACGTGT 59.319 45.455 17.22 17.22 0.00 4.49
5861 8293 3.242641 TGCGACTATATCTCACACGTGTC 60.243 47.826 20.49 3.06 0.00 3.67
5862 8294 3.532950 CGACTATATCTCACACGTGTCG 58.467 50.000 20.49 14.53 39.61 4.35
5863 8295 3.244579 CGACTATATCTCACACGTGTCGA 59.755 47.826 20.49 18.23 45.66 4.20
5864 8296 4.606452 CGACTATATCTCACACGTGTCGAG 60.606 50.000 27.80 27.80 45.66 4.04
5865 8297 3.560481 ACTATATCTCACACGTGTCGAGG 59.440 47.826 30.35 22.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.556911 CTGGGCACTGTCTCTACCATT 59.443 52.381 0.00 0.00 0.00 3.16
1 2 1.198713 CTGGGCACTGTCTCTACCAT 58.801 55.000 0.00 0.00 0.00 3.55
2 3 0.904865 CCTGGGCACTGTCTCTACCA 60.905 60.000 0.00 0.00 0.00 3.25
27 28 2.281900 GCGGTAGGCCACAAACCA 60.282 61.111 5.01 0.00 34.80 3.67
62 63 4.154015 GCACTGTGATTACTACATGCAACA 59.846 41.667 12.86 0.00 35.07 3.33
158 160 2.750166 ACACAGACGAGATAGTGACTGG 59.250 50.000 0.00 0.00 35.97 4.00
160 162 3.945346 AGACACAGACGAGATAGTGACT 58.055 45.455 0.00 0.00 35.97 3.41
166 168 2.475685 CGCGAAAGACACAGACGAGATA 60.476 50.000 0.00 0.00 0.00 1.98
173 175 1.289066 CCTCCGCGAAAGACACAGA 59.711 57.895 8.23 0.00 0.00 3.41
205 207 2.832129 TCAAAAGGAGTAGCGAGGACAT 59.168 45.455 0.00 0.00 0.00 3.06
231 233 2.820787 CCACTTCGAGGTTGTAGACTCT 59.179 50.000 0.00 0.00 0.00 3.24
241 243 0.469331 TGAGGTCACCACTTCGAGGT 60.469 55.000 0.00 0.00 40.85 3.85
280 282 2.948979 CACACCACACACATTACCTTGT 59.051 45.455 0.00 0.00 0.00 3.16
300 302 2.105128 CCGCCAAAAACAACGGCA 59.895 55.556 0.00 0.00 46.60 5.69
324 326 2.212812 TATTCTTGCATGTGCCACCA 57.787 45.000 2.07 0.00 41.18 4.17
347 349 1.448717 GAAGGGACTCGAGCTTGGC 60.449 63.158 13.61 0.00 38.49 4.52
382 384 1.596934 CAAGCTCACCGGCTCCTTA 59.403 57.895 0.00 0.00 42.24 2.69
399 401 4.583489 ACTAGAAGAGTCGTCAAAAGACCA 59.417 41.667 8.82 0.00 39.31 4.02
423 426 5.299949 TCAACCGAAGACTTAAAACTACCC 58.700 41.667 0.00 0.00 0.00 3.69
426 429 6.527423 ACCATCAACCGAAGACTTAAAACTA 58.473 36.000 0.00 0.00 0.00 2.24
465 468 1.901085 CTGGCTTTCCCTCTAGCGT 59.099 57.895 0.00 0.00 38.28 5.07
487 490 5.890334 TGTCAAACCACAAACTCAGATTTC 58.110 37.500 0.00 0.00 0.00 2.17
522 525 0.247736 GACATCCTCGACCAAGTGCT 59.752 55.000 0.00 0.00 0.00 4.40
525 528 2.957060 TCGACATCCTCGACCAAGT 58.043 52.632 0.00 0.00 46.75 3.16
533 536 0.317103 CGTCATCCGTCGACATCCTC 60.317 60.000 17.16 0.26 32.72 3.71
534 537 0.746923 TCGTCATCCGTCGACATCCT 60.747 55.000 17.16 0.00 37.94 3.24
536 539 1.399572 CATCGTCATCCGTCGACATC 58.600 55.000 17.16 0.00 38.85 3.06
537 540 0.030773 CCATCGTCATCCGTCGACAT 59.969 55.000 17.16 0.00 38.85 3.06
538 541 1.431845 CCATCGTCATCCGTCGACA 59.568 57.895 17.16 0.00 38.85 4.35
539 542 1.944676 GCCATCGTCATCCGTCGAC 60.945 63.158 5.18 5.18 38.85 4.20
558 562 2.001269 ATCCTCCTTCAACCCCGGG 61.001 63.158 15.80 15.80 0.00 5.73
597 601 4.225942 TGAGGCATTTATCCTTGTGACTCT 59.774 41.667 8.37 0.00 45.01 3.24
632 636 1.098050 GTTGCAAGCCGATGGAGAAT 58.902 50.000 0.00 0.00 0.00 2.40
703 707 1.468914 GGGAAATCTTGCGACTTCCAC 59.531 52.381 4.57 0.00 45.14 4.02
737 741 7.872061 AACCCCTCCAGAAAAAGAAAAATAT 57.128 32.000 0.00 0.00 0.00 1.28
738 742 8.966155 ATAACCCCTCCAGAAAAAGAAAAATA 57.034 30.769 0.00 0.00 0.00 1.40
782 787 6.017852 ACGTTTCTTTCTCTGCCTAAGAAAAG 60.018 38.462 15.70 15.70 44.69 2.27
787 792 4.058817 ACACGTTTCTTTCTCTGCCTAAG 58.941 43.478 0.00 0.00 0.00 2.18
815 820 5.049680 GGACGTGTTTCTTTCTCTATTGCAA 60.050 40.000 0.00 0.00 0.00 4.08
816 821 4.451096 GGACGTGTTTCTTTCTCTATTGCA 59.549 41.667 0.00 0.00 0.00 4.08
868 879 3.044986 CGTAACCGAGTCGAGACAAAAA 58.955 45.455 15.64 0.00 35.63 1.94
902 913 9.677567 CTCAAAAATAAATCGAGGTTTCTCAAA 57.322 29.630 0.00 0.00 39.95 2.69
903 914 9.062524 TCTCAAAAATAAATCGAGGTTTCTCAA 57.937 29.630 0.00 0.00 39.95 3.02
904 915 8.615878 TCTCAAAAATAAATCGAGGTTTCTCA 57.384 30.769 0.00 0.00 39.95 3.27
905 916 9.893305 TTTCTCAAAAATAAATCGAGGTTTCTC 57.107 29.630 0.00 0.00 36.69 2.87
906 917 9.678941 GTTTCTCAAAAATAAATCGAGGTTTCT 57.321 29.630 0.00 0.00 0.00 2.52
907 918 8.912658 GGTTTCTCAAAAATAAATCGAGGTTTC 58.087 33.333 0.00 0.00 0.00 2.78
908 919 8.638873 AGGTTTCTCAAAAATAAATCGAGGTTT 58.361 29.630 0.00 0.00 0.00 3.27
909 920 8.178313 AGGTTTCTCAAAAATAAATCGAGGTT 57.822 30.769 0.00 0.00 0.00 3.50
910 921 7.360946 CGAGGTTTCTCAAAAATAAATCGAGGT 60.361 37.037 0.00 0.00 39.95 3.85
911 922 6.961554 CGAGGTTTCTCAAAAATAAATCGAGG 59.038 38.462 0.00 0.00 39.95 4.63
912 923 7.688578 GTCGAGGTTTCTCAAAAATAAATCGAG 59.311 37.037 0.00 0.00 39.95 4.04
913 924 7.386848 AGTCGAGGTTTCTCAAAAATAAATCGA 59.613 33.333 0.00 0.00 39.95 3.59
914 925 7.519002 AGTCGAGGTTTCTCAAAAATAAATCG 58.481 34.615 0.00 0.00 39.95 3.34
915 926 9.118236 CAAGTCGAGGTTTCTCAAAAATAAATC 57.882 33.333 0.00 0.00 39.95 2.17
916 927 8.082242 CCAAGTCGAGGTTTCTCAAAAATAAAT 58.918 33.333 0.00 0.00 39.95 1.40
917 928 7.067737 ACCAAGTCGAGGTTTCTCAAAAATAAA 59.932 33.333 0.00 0.00 39.95 1.40
920 931 4.887655 ACCAAGTCGAGGTTTCTCAAAAAT 59.112 37.500 0.00 0.00 39.95 1.82
926 937 2.985139 CGTAACCAAGTCGAGGTTTCTC 59.015 50.000 12.28 4.43 46.85 2.87
970 988 0.035458 GGCCCATCTATTGTCTCGGG 59.965 60.000 0.00 0.00 36.71 5.14
977 995 1.095228 ACGCGTTGGCCCATCTATTG 61.095 55.000 5.58 0.00 35.02 1.90
1005 1023 2.060326 TGTCTCGTTTTACGCTCAGG 57.940 50.000 0.00 0.00 42.21 3.86
1009 1028 2.401351 GGACTTGTCTCGTTTTACGCT 58.599 47.619 0.61 0.00 42.21 5.07
1051 1070 1.275505 GGCTTCTAGACGCGGTTTAC 58.724 55.000 12.47 0.00 0.00 2.01
1052 1071 0.174162 GGGCTTCTAGACGCGGTTTA 59.826 55.000 12.47 0.00 0.00 2.01
1053 1072 1.079336 GGGCTTCTAGACGCGGTTT 60.079 57.895 12.47 0.00 0.00 3.27
1054 1073 0.682209 TAGGGCTTCTAGACGCGGTT 60.682 55.000 12.47 0.00 0.00 4.44
1055 1074 0.682209 TTAGGGCTTCTAGACGCGGT 60.682 55.000 12.47 7.08 0.00 5.68
1056 1075 0.458669 TTTAGGGCTTCTAGACGCGG 59.541 55.000 12.47 0.00 0.00 6.46
1057 1076 2.288961 TTTTAGGGCTTCTAGACGCG 57.711 50.000 14.38 3.53 0.00 6.01
1076 1095 5.989551 TCTTTAGACGCCGTTTACTTTTT 57.010 34.783 0.00 0.00 0.00 1.94
1077 1096 5.989551 TTCTTTAGACGCCGTTTACTTTT 57.010 34.783 0.00 0.00 0.00 2.27
1078 1097 6.347969 GGAATTCTTTAGACGCCGTTTACTTT 60.348 38.462 5.23 0.00 0.00 2.66
1079 1098 5.121298 GGAATTCTTTAGACGCCGTTTACTT 59.879 40.000 5.23 0.00 0.00 2.24
1080 1099 4.628766 GGAATTCTTTAGACGCCGTTTACT 59.371 41.667 5.23 0.00 0.00 2.24
1087 1106 1.296727 CCGGGAATTCTTTAGACGCC 58.703 55.000 5.23 0.00 0.00 5.68
1095 1114 0.037734 GTGGTGTCCCGGGAATTCTT 59.962 55.000 28.84 0.00 0.00 2.52
1154 1173 2.137177 TTTGGGGAAGAGAAGCGGGG 62.137 60.000 0.00 0.00 0.00 5.73
1255 1275 0.591659 GAACCAACCGAACCTGAAGC 59.408 55.000 0.00 0.00 0.00 3.86
1301 1587 3.062639 CGAAAATTCAGTGGTGAGGATCG 59.937 47.826 0.00 0.00 38.61 3.69
1320 1606 2.560542 CAAAACATGGATGAACCCCGAA 59.439 45.455 0.00 0.00 38.00 4.30
1322 1608 1.892474 ACAAAACATGGATGAACCCCG 59.108 47.619 0.00 0.00 38.00 5.73
1326 1612 2.241722 CGCGACAAAACATGGATGAAC 58.758 47.619 0.00 0.00 0.00 3.18
1328 1614 0.801872 CCGCGACAAAACATGGATGA 59.198 50.000 8.23 0.00 0.00 2.92
1332 1618 2.252127 ATCGCCGCGACAAAACATGG 62.252 55.000 19.45 0.00 39.18 3.66
1336 1622 0.384974 TGAAATCGCCGCGACAAAAC 60.385 50.000 19.45 8.73 39.18 2.43
1367 1653 4.386711 ACCTAAACAACAGGACAAGTAGC 58.613 43.478 0.00 0.00 36.61 3.58
1371 1657 5.277828 GCAACTACCTAAACAACAGGACAAG 60.278 44.000 0.00 0.00 36.61 3.16
1376 1662 3.432252 CGAGCAACTACCTAAACAACAGG 59.568 47.826 0.00 0.00 39.25 4.00
1386 1672 1.522569 GGATGGCGAGCAACTACCT 59.477 57.895 0.00 0.00 0.00 3.08
1401 1687 2.975489 AGAATAGGATCAAGGCACGGAT 59.025 45.455 0.00 0.00 0.00 4.18
1466 1752 2.737039 GCACGCAAAAGACCCAAAAAGA 60.737 45.455 0.00 0.00 0.00 2.52
1468 1754 1.646189 GCACGCAAAAGACCCAAAAA 58.354 45.000 0.00 0.00 0.00 1.94
1558 1844 7.429340 CAGCATCTATTCACCACGAAATAAAAC 59.571 37.037 0.00 0.00 37.12 2.43
1560 1846 6.458206 GCAGCATCTATTCACCACGAAATAAA 60.458 38.462 0.00 0.00 37.12 1.40
1622 1908 1.326548 GTTATGAATGCCACGACGGAC 59.673 52.381 0.00 0.00 36.56 4.79
1626 1921 4.024893 CCTACATGTTATGAATGCCACGAC 60.025 45.833 2.30 0.00 0.00 4.34
1627 1922 4.126437 CCTACATGTTATGAATGCCACGA 58.874 43.478 2.30 0.00 0.00 4.35
1628 1923 3.303990 GCCTACATGTTATGAATGCCACG 60.304 47.826 2.30 0.00 0.00 4.94
1629 1924 3.885297 AGCCTACATGTTATGAATGCCAC 59.115 43.478 2.30 0.00 0.00 5.01
1630 1925 4.169059 AGCCTACATGTTATGAATGCCA 57.831 40.909 2.30 0.00 0.00 4.92
1631 1926 6.633500 TTAAGCCTACATGTTATGAATGCC 57.367 37.500 2.30 0.00 0.00 4.40
1632 1927 7.432252 GTGTTTAAGCCTACATGTTATGAATGC 59.568 37.037 2.30 0.00 0.00 3.56
1633 1928 7.639850 CGTGTTTAAGCCTACATGTTATGAATG 59.360 37.037 2.30 0.00 0.00 2.67
1656 1951 6.573725 GCTGTACACTTTTATGTTCTTTCGTG 59.426 38.462 0.00 0.00 33.85 4.35
1714 2009 5.247110 AGACTGAATACTTCCTCTTGCTCAA 59.753 40.000 0.00 0.00 0.00 3.02
1715 2010 4.774726 AGACTGAATACTTCCTCTTGCTCA 59.225 41.667 0.00 0.00 0.00 4.26
1716 2011 5.337578 AGACTGAATACTTCCTCTTGCTC 57.662 43.478 0.00 0.00 0.00 4.26
1717 2012 5.753721 AAGACTGAATACTTCCTCTTGCT 57.246 39.130 0.00 0.00 29.41 3.91
1718 2013 5.934625 TCAAAGACTGAATACTTCCTCTTGC 59.065 40.000 0.00 0.00 30.41 4.01
1719 2014 6.091986 GCTCAAAGACTGAATACTTCCTCTTG 59.908 42.308 0.00 0.00 32.17 3.02
1720 2015 6.169800 GCTCAAAGACTGAATACTTCCTCTT 58.830 40.000 0.00 0.00 32.17 2.85
1721 2016 5.337975 GGCTCAAAGACTGAATACTTCCTCT 60.338 44.000 0.00 0.00 32.17 3.69
1722 2017 4.873259 GGCTCAAAGACTGAATACTTCCTC 59.127 45.833 0.00 0.00 32.17 3.71
1723 2018 4.287067 TGGCTCAAAGACTGAATACTTCCT 59.713 41.667 0.00 0.00 32.17 3.36
1724 2019 4.579869 TGGCTCAAAGACTGAATACTTCC 58.420 43.478 0.00 0.00 32.17 3.46
1847 2200 5.627499 TGGCATAAAAGTGTGATCAAGAC 57.373 39.130 0.00 0.00 0.00 3.01
1872 2225 5.592054 CAAGCGTCTCTGACAGGATAAATA 58.408 41.667 1.81 0.00 32.09 1.40
1873 2226 4.437239 CAAGCGTCTCTGACAGGATAAAT 58.563 43.478 1.81 0.00 32.09 1.40
1936 2290 9.277783 ACACCAATCTAATCTATCAAACATAGC 57.722 33.333 0.00 0.00 0.00 2.97
1994 2359 6.324601 ACTCAAATCCAGAAATCCAGATCT 57.675 37.500 0.00 0.00 0.00 2.75
2005 2370 6.493802 AGTTGTACTCAGTACTCAAATCCAGA 59.506 38.462 16.09 0.00 39.49 3.86
2113 2478 3.064900 AGCTCTCTGCCCAGTTAAAAG 57.935 47.619 0.00 0.00 44.23 2.27
2452 4471 0.041576 CATTCGCATCTGCACCATCG 60.042 55.000 2.72 0.00 42.21 3.84
2665 4684 7.320399 CAACGAGCCATTACCAGTCATATATA 58.680 38.462 0.00 0.00 0.00 0.86
2962 4988 5.289675 CACATATTCTCAACAGTCCTTCGAC 59.710 44.000 0.00 0.00 39.50 4.20
3036 5062 9.204570 TCTGTTAAAAGTTCTCAGCATTAGTAC 57.795 33.333 0.00 0.00 0.00 2.73
3075 5102 6.208204 ACTCTTTCCCAAATTTCTCATGTCTG 59.792 38.462 0.00 0.00 0.00 3.51
3078 5105 7.671398 ACATACTCTTTCCCAAATTTCTCATGT 59.329 33.333 0.00 0.00 0.00 3.21
3131 5158 6.155221 TGAGCTCTGAAACATATAGGTCTGTT 59.845 38.462 16.19 0.00 37.19 3.16
3230 5257 3.357203 CACTGCTGAGAGGGACTTACTA 58.643 50.000 0.00 0.00 41.55 1.82
3498 5525 3.896648 TTTCCATCGCAGTTCAGTTTC 57.103 42.857 0.00 0.00 0.00 2.78
3566 5593 3.310774 CCGGCAACAGAATGACAATAGAG 59.689 47.826 0.00 0.00 39.69 2.43
3731 5761 4.027437 AGATACCAACAGAGAGAAGGGAC 58.973 47.826 0.00 0.00 0.00 4.46
3732 5762 4.338795 AGATACCAACAGAGAGAAGGGA 57.661 45.455 0.00 0.00 0.00 4.20
3737 5767 3.449018 GCAGGAAGATACCAACAGAGAGA 59.551 47.826 0.00 0.00 0.00 3.10
3738 5768 3.196469 TGCAGGAAGATACCAACAGAGAG 59.804 47.826 0.00 0.00 0.00 3.20
3780 5810 6.998074 TCTGGTTACATGAGTGAGTTTCAAAT 59.002 34.615 0.00 0.00 0.00 2.32
3781 5811 6.353323 TCTGGTTACATGAGTGAGTTTCAAA 58.647 36.000 0.00 0.00 0.00 2.69
3920 5951 5.486526 AGCTTCTCAGGTCTTTATCAACAG 58.513 41.667 0.00 0.00 0.00 3.16
3925 5956 7.387948 TGTTTGTTAGCTTCTCAGGTCTTTATC 59.612 37.037 0.00 0.00 31.45 1.75
3942 5973 8.246908 TCACGTGGATAAACTATGTTTGTTAG 57.753 34.615 17.00 0.00 0.00 2.34
4020 6051 5.794687 TGCAATTCATCAGGTTACTAACG 57.205 39.130 0.00 0.00 0.00 3.18
4031 6062 2.563620 ACAACAGGCATGCAATTCATCA 59.436 40.909 21.36 0.00 31.79 3.07
4032 6063 3.241067 ACAACAGGCATGCAATTCATC 57.759 42.857 21.36 0.00 31.79 2.92
4033 6064 3.688694 AACAACAGGCATGCAATTCAT 57.311 38.095 21.36 0.00 35.31 2.57
4218 6309 1.590259 GCGCCTCTTCATCCTCGAC 60.590 63.158 0.00 0.00 0.00 4.20
4490 6756 4.281182 AGTTACTCAACAGTCGTGGAAGAT 59.719 41.667 0.00 0.00 37.10 2.40
4531 6840 2.918712 ATCTCCACATCGAACCCATC 57.081 50.000 0.00 0.00 0.00 3.51
4583 6892 8.393671 ACTAAGCATAGTAGATAGTACACCAC 57.606 38.462 0.00 0.00 40.62 4.16
4642 6951 6.756299 TGCAAATGACTAATATGCAACTCA 57.244 33.333 0.00 0.00 43.39 3.41
4674 6985 4.019591 GCTCTGGGGTTTAGTCTCCTTTTA 60.020 45.833 0.00 0.00 0.00 1.52
4684 6995 1.909700 TGCAAAGCTCTGGGGTTTAG 58.090 50.000 4.14 1.43 42.80 1.85
4693 7004 3.418995 ACTCACAATGATGCAAAGCTCT 58.581 40.909 0.00 0.00 0.00 4.09
4743 7057 5.334421 ACAGAGGGAGTACTACATTTGTCT 58.666 41.667 9.96 0.00 0.00 3.41
4836 7150 8.095169 CGCCTAATAATTACTCCCTCTGTAAAT 58.905 37.037 0.00 0.00 34.20 1.40
4877 7191 3.333029 AATGGCTTAATTGTGGTTGCC 57.667 42.857 0.00 0.00 40.62 4.52
4882 7196 7.099266 TCATCTTGTAATGGCTTAATTGTGG 57.901 36.000 0.00 0.00 0.00 4.17
4923 7237 1.523524 GAATCCGAACGGGCCCTTA 59.476 57.895 22.43 0.00 34.94 2.69
4924 7238 2.271173 GAATCCGAACGGGCCCTT 59.729 61.111 22.43 7.92 34.94 3.95
4925 7239 3.793888 GGAATCCGAACGGGCCCT 61.794 66.667 22.43 0.00 34.94 5.19
4926 7240 3.339738 AAGGAATCCGAACGGGCCC 62.340 63.158 13.57 13.57 34.94 5.80
4927 7241 1.818363 GAAGGAATCCGAACGGGCC 60.818 63.158 13.29 11.82 34.94 5.80
4928 7242 1.818363 GGAAGGAATCCGAACGGGC 60.818 63.158 13.29 3.69 38.79 6.13
4929 7243 4.534401 GGAAGGAATCCGAACGGG 57.466 61.111 13.29 0.00 38.79 5.28
4937 7251 1.636003 AGTTGTGGAGGGGAAGGAATC 59.364 52.381 0.00 0.00 0.00 2.52
4938 7252 1.636003 GAGTTGTGGAGGGGAAGGAAT 59.364 52.381 0.00 0.00 0.00 3.01
4939 7253 1.064825 GAGTTGTGGAGGGGAAGGAA 58.935 55.000 0.00 0.00 0.00 3.36
4940 7254 0.193574 AGAGTTGTGGAGGGGAAGGA 59.806 55.000 0.00 0.00 0.00 3.36
4941 7255 0.326264 CAGAGTTGTGGAGGGGAAGG 59.674 60.000 0.00 0.00 0.00 3.46
4942 7256 0.322008 GCAGAGTTGTGGAGGGGAAG 60.322 60.000 0.00 0.00 0.00 3.46
4943 7257 0.768221 AGCAGAGTTGTGGAGGGGAA 60.768 55.000 0.00 0.00 0.00 3.97
4944 7258 1.152030 AGCAGAGTTGTGGAGGGGA 60.152 57.895 0.00 0.00 0.00 4.81
4945 7259 1.298014 GAGCAGAGTTGTGGAGGGG 59.702 63.158 0.00 0.00 0.00 4.79
4946 7260 1.298014 GGAGCAGAGTTGTGGAGGG 59.702 63.158 0.00 0.00 0.00 4.30
4947 7261 1.298014 GGGAGCAGAGTTGTGGAGG 59.702 63.158 0.00 0.00 0.00 4.30
4948 7262 1.079543 CGGGAGCAGAGTTGTGGAG 60.080 63.158 0.00 0.00 0.00 3.86
4949 7263 2.583441 CCGGGAGCAGAGTTGTGGA 61.583 63.158 0.00 0.00 0.00 4.02
4950 7264 2.046892 CCGGGAGCAGAGTTGTGG 60.047 66.667 0.00 0.00 0.00 4.17
4951 7265 1.079543 CTCCGGGAGCAGAGTTGTG 60.080 63.158 11.83 0.00 0.00 3.33
4952 7266 3.382111 CTCCGGGAGCAGAGTTGT 58.618 61.111 11.83 0.00 0.00 3.32
4969 7283 4.400961 AACTGCCGCTCCTCCAGC 62.401 66.667 0.00 0.00 45.85 4.85
4970 7284 2.125350 GAACTGCCGCTCCTCCAG 60.125 66.667 0.00 0.00 0.00 3.86
4971 7285 2.050836 TTTGAACTGCCGCTCCTCCA 62.051 55.000 0.00 0.00 0.00 3.86
4972 7286 0.889186 TTTTGAACTGCCGCTCCTCC 60.889 55.000 0.00 0.00 0.00 4.30
4973 7287 1.131315 GATTTTGAACTGCCGCTCCTC 59.869 52.381 0.00 0.00 0.00 3.71
4974 7288 1.168714 GATTTTGAACTGCCGCTCCT 58.831 50.000 0.00 0.00 0.00 3.69
4975 7289 0.179189 CGATTTTGAACTGCCGCTCC 60.179 55.000 0.00 0.00 0.00 4.70
4976 7290 0.517316 ACGATTTTGAACTGCCGCTC 59.483 50.000 0.00 0.00 0.00 5.03
4977 7291 0.238289 CACGATTTTGAACTGCCGCT 59.762 50.000 0.00 0.00 0.00 5.52
4978 7292 0.729140 CCACGATTTTGAACTGCCGC 60.729 55.000 0.00 0.00 0.00 6.53
4979 7293 0.871722 TCCACGATTTTGAACTGCCG 59.128 50.000 0.00 0.00 0.00 5.69
4980 7294 1.880027 ACTCCACGATTTTGAACTGCC 59.120 47.619 0.00 0.00 0.00 4.85
4981 7295 2.350772 CCACTCCACGATTTTGAACTGC 60.351 50.000 0.00 0.00 0.00 4.40
4982 7296 2.226437 CCCACTCCACGATTTTGAACTG 59.774 50.000 0.00 0.00 0.00 3.16
4983 7297 2.504367 CCCACTCCACGATTTTGAACT 58.496 47.619 0.00 0.00 0.00 3.01
4984 7298 1.539827 CCCCACTCCACGATTTTGAAC 59.460 52.381 0.00 0.00 0.00 3.18
4985 7299 1.422024 TCCCCACTCCACGATTTTGAA 59.578 47.619 0.00 0.00 0.00 2.69
4986 7300 1.060729 TCCCCACTCCACGATTTTGA 58.939 50.000 0.00 0.00 0.00 2.69
4987 7301 1.812571 CTTCCCCACTCCACGATTTTG 59.187 52.381 0.00 0.00 0.00 2.44
4988 7302 1.271926 CCTTCCCCACTCCACGATTTT 60.272 52.381 0.00 0.00 0.00 1.82
4989 7303 0.328258 CCTTCCCCACTCCACGATTT 59.672 55.000 0.00 0.00 0.00 2.17
4990 7304 0.546747 TCCTTCCCCACTCCACGATT 60.547 55.000 0.00 0.00 0.00 3.34
4991 7305 0.978146 CTCCTTCCCCACTCCACGAT 60.978 60.000 0.00 0.00 0.00 3.73
4992 7306 1.609501 CTCCTTCCCCACTCCACGA 60.610 63.158 0.00 0.00 0.00 4.35
4993 7307 2.660064 CCTCCTTCCCCACTCCACG 61.660 68.421 0.00 0.00 0.00 4.94
4994 7308 1.539124 ACCTCCTTCCCCACTCCAC 60.539 63.158 0.00 0.00 0.00 4.02
4995 7309 1.538876 CACCTCCTTCCCCACTCCA 60.539 63.158 0.00 0.00 0.00 3.86
4996 7310 2.972819 GCACCTCCTTCCCCACTCC 61.973 68.421 0.00 0.00 0.00 3.85
4997 7311 1.904990 GAGCACCTCCTTCCCCACTC 61.905 65.000 0.00 0.00 0.00 3.51
4998 7312 1.920835 GAGCACCTCCTTCCCCACT 60.921 63.158 0.00 0.00 0.00 4.00
4999 7313 2.671682 GAGCACCTCCTTCCCCAC 59.328 66.667 0.00 0.00 0.00 4.61
5000 7314 2.610859 GGAGCACCTCCTTCCCCA 60.611 66.667 4.04 0.00 46.41 4.96
5008 7322 2.307934 GAGAATCTGTGGAGCACCTC 57.692 55.000 0.71 0.00 37.04 3.85
5021 7335 3.491267 CCGCTCCGTGAAATTAGAGAATC 59.509 47.826 0.00 0.00 0.00 2.52
5022 7336 3.132289 TCCGCTCCGTGAAATTAGAGAAT 59.868 43.478 0.00 0.00 0.00 2.40
5023 7337 2.494471 TCCGCTCCGTGAAATTAGAGAA 59.506 45.455 0.00 0.00 0.00 2.87
5024 7338 2.097036 TCCGCTCCGTGAAATTAGAGA 58.903 47.619 0.00 0.00 0.00 3.10
5025 7339 2.579207 TCCGCTCCGTGAAATTAGAG 57.421 50.000 0.00 0.00 0.00 2.43
5026 7340 2.418197 CCTTCCGCTCCGTGAAATTAGA 60.418 50.000 0.00 0.00 0.00 2.10
5027 7341 1.933853 CCTTCCGCTCCGTGAAATTAG 59.066 52.381 0.00 0.00 0.00 1.73
5028 7342 1.551430 TCCTTCCGCTCCGTGAAATTA 59.449 47.619 0.00 0.00 0.00 1.40
5029 7343 0.323629 TCCTTCCGCTCCGTGAAATT 59.676 50.000 0.00 0.00 0.00 1.82
5030 7344 0.541863 ATCCTTCCGCTCCGTGAAAT 59.458 50.000 0.00 0.00 0.00 2.17
5031 7345 0.323629 AATCCTTCCGCTCCGTGAAA 59.676 50.000 0.00 0.00 0.00 2.69
5032 7346 1.134907 GTAATCCTTCCGCTCCGTGAA 60.135 52.381 0.00 0.00 0.00 3.18
5033 7347 0.458669 GTAATCCTTCCGCTCCGTGA 59.541 55.000 0.00 0.00 0.00 4.35
5034 7348 0.529992 GGTAATCCTTCCGCTCCGTG 60.530 60.000 0.00 0.00 0.00 4.94
5035 7349 1.821258 GGTAATCCTTCCGCTCCGT 59.179 57.895 0.00 0.00 0.00 4.69
5036 7350 1.299926 CGGTAATCCTTCCGCTCCG 60.300 63.158 0.00 0.00 40.28 4.63
5037 7351 0.462789 TTCGGTAATCCTTCCGCTCC 59.537 55.000 0.00 0.00 45.44 4.70
5038 7352 1.134907 TGTTCGGTAATCCTTCCGCTC 60.135 52.381 0.00 0.00 45.44 5.03
5039 7353 0.899720 TGTTCGGTAATCCTTCCGCT 59.100 50.000 0.00 0.00 45.44 5.52
5040 7354 1.004595 GTGTTCGGTAATCCTTCCGC 58.995 55.000 0.00 0.00 45.44 5.54
5041 7355 1.648504 GGTGTTCGGTAATCCTTCCG 58.351 55.000 0.00 0.00 46.93 4.30
5042 7356 1.407851 GGGGTGTTCGGTAATCCTTCC 60.408 57.143 0.00 0.00 0.00 3.46
5043 7357 1.558294 AGGGGTGTTCGGTAATCCTTC 59.442 52.381 0.00 0.00 0.00 3.46
5044 7358 1.665137 AGGGGTGTTCGGTAATCCTT 58.335 50.000 0.00 0.00 0.00 3.36
5045 7359 1.665137 AAGGGGTGTTCGGTAATCCT 58.335 50.000 0.00 0.00 0.00 3.24
5046 7360 3.054875 ACTTAAGGGGTGTTCGGTAATCC 60.055 47.826 7.53 0.00 0.00 3.01
5047 7361 4.212143 ACTTAAGGGGTGTTCGGTAATC 57.788 45.455 7.53 0.00 0.00 1.75
5048 7362 4.041938 TCAACTTAAGGGGTGTTCGGTAAT 59.958 41.667 7.53 0.00 0.00 1.89
5049 7363 3.390639 TCAACTTAAGGGGTGTTCGGTAA 59.609 43.478 7.53 0.00 0.00 2.85
5050 7364 2.971330 TCAACTTAAGGGGTGTTCGGTA 59.029 45.455 7.53 0.00 0.00 4.02
5051 7365 1.770061 TCAACTTAAGGGGTGTTCGGT 59.230 47.619 7.53 0.00 0.00 4.69
5052 7366 2.148768 GTCAACTTAAGGGGTGTTCGG 58.851 52.381 7.53 0.00 0.00 4.30
5053 7367 3.121738 AGTCAACTTAAGGGGTGTTCG 57.878 47.619 7.53 0.00 0.00 3.95
5054 7368 4.715713 AGAAGTCAACTTAAGGGGTGTTC 58.284 43.478 7.53 4.51 36.11 3.18
5055 7369 4.790718 AGAAGTCAACTTAAGGGGTGTT 57.209 40.909 7.53 0.00 36.11 3.32
5056 7370 4.412528 AGAAGAAGTCAACTTAAGGGGTGT 59.587 41.667 7.53 0.00 36.11 4.16
5057 7371 4.757149 CAGAAGAAGTCAACTTAAGGGGTG 59.243 45.833 7.53 2.26 36.11 4.61
5058 7372 4.747009 GCAGAAGAAGTCAACTTAAGGGGT 60.747 45.833 7.53 0.00 36.11 4.95
5059 7373 3.753797 GCAGAAGAAGTCAACTTAAGGGG 59.246 47.826 7.53 0.00 36.11 4.79
5060 7374 4.453819 CAGCAGAAGAAGTCAACTTAAGGG 59.546 45.833 7.53 0.00 36.11 3.95
5061 7375 4.083590 GCAGCAGAAGAAGTCAACTTAAGG 60.084 45.833 7.53 0.00 36.11 2.69
5062 7376 4.512944 TGCAGCAGAAGAAGTCAACTTAAG 59.487 41.667 0.00 0.00 36.11 1.85
5063 7377 4.450976 TGCAGCAGAAGAAGTCAACTTAA 58.549 39.130 0.00 0.00 36.11 1.85
5107 7421 2.972505 AACGGCAGTGCAAGGACG 60.973 61.111 18.61 13.14 0.00 4.79
5116 7430 0.676782 GTATCCTTGGCAACGGCAGT 60.677 55.000 0.00 0.00 43.71 4.40
5177 7609 4.487714 TTTCTGTCTCACTCCTGTGTTT 57.512 40.909 0.00 0.00 44.14 2.83
5184 7616 3.471680 ACTTGCTTTTCTGTCTCACTCC 58.528 45.455 0.00 0.00 0.00 3.85
5186 7618 4.142609 TGACTTGCTTTTCTGTCTCACT 57.857 40.909 0.00 0.00 0.00 3.41
5216 7648 4.215399 ACGTTGAATCACCCATGTTTGTAG 59.785 41.667 0.00 0.00 0.00 2.74
5225 7657 1.066430 GGAGCTACGTTGAATCACCCA 60.066 52.381 0.00 0.00 0.00 4.51
5263 7695 7.068593 ACATCTTTCTTCTTGACCAAAATCACA 59.931 33.333 0.00 0.00 0.00 3.58
5297 7729 5.200454 GTGTTGATAATCTGTGCATAAGCG 58.800 41.667 0.00 0.00 46.23 4.68
5304 7736 4.436050 CGTTGAGGTGTTGATAATCTGTGC 60.436 45.833 0.00 0.00 0.00 4.57
5305 7737 4.436050 GCGTTGAGGTGTTGATAATCTGTG 60.436 45.833 0.00 0.00 0.00 3.66
5317 7749 0.179032 TTGTCATGGCGTTGAGGTGT 60.179 50.000 0.00 0.00 0.00 4.16
5336 7768 5.558818 TGGCACTAAAAATTTGGCAATCAT 58.441 33.333 0.00 0.00 42.30 2.45
5352 7784 4.940654 TCAAATGTTCGATGATTGGCACTA 59.059 37.500 0.00 0.00 0.00 2.74
5401 7833 7.836183 ACTGCTCCCATATTTAACTTGAAGAAT 59.164 33.333 0.00 0.00 0.00 2.40
5406 7838 9.944376 GATATACTGCTCCCATATTTAACTTGA 57.056 33.333 0.00 0.00 0.00 3.02
5442 7874 1.133325 TGTGTACCCCTTGTGCCATTT 60.133 47.619 0.00 0.00 0.00 2.32
5459 7891 8.655092 ACATTAAAGTGTCAATTTTGTTGTGTG 58.345 29.630 3.26 0.00 0.00 3.82
5535 7967 7.639113 AAGTCAACAACTAATCCAACTTTCA 57.361 32.000 0.00 0.00 37.17 2.69
5543 7975 4.753107 TCGACCAAAGTCAACAACTAATCC 59.247 41.667 0.00 0.00 43.73 3.01
5603 8035 2.151202 ACGACTCAAACCAATTGCGAT 58.849 42.857 0.00 0.00 38.98 4.58
5616 8048 2.176045 TGAGGAGCCAATTACGACTCA 58.824 47.619 0.00 0.00 0.00 3.41
5627 8059 1.351017 ACTTTCGGATTTGAGGAGCCA 59.649 47.619 0.00 0.00 0.00 4.75
5633 8065 4.568760 GGAAGCTCTACTTTCGGATTTGAG 59.431 45.833 0.00 0.00 39.29 3.02
5648 8080 2.621668 GGCTACCCATTTTGGAAGCTCT 60.622 50.000 15.74 0.00 42.38 4.09
5693 8125 7.172190 ACGCCATCAATGATCTAGTTGAATAAG 59.828 37.037 11.05 7.54 37.82 1.73
5702 8134 2.486918 TGCACGCCATCAATGATCTAG 58.513 47.619 0.00 0.00 0.00 2.43
5703 8135 2.618442 TGCACGCCATCAATGATCTA 57.382 45.000 0.00 0.00 0.00 1.98
5704 8136 1.977056 ATGCACGCCATCAATGATCT 58.023 45.000 0.00 0.00 0.00 2.75
5705 8137 2.390938 CAATGCACGCCATCAATGATC 58.609 47.619 0.00 0.00 31.43 2.92
5706 8138 1.537348 GCAATGCACGCCATCAATGAT 60.537 47.619 0.00 0.00 31.43 2.45
5707 8139 0.179132 GCAATGCACGCCATCAATGA 60.179 50.000 0.00 0.00 31.43 2.57
5708 8140 2.293765 GCAATGCACGCCATCAATG 58.706 52.632 0.00 0.00 31.43 2.82
5709 8141 4.819082 GCAATGCACGCCATCAAT 57.181 50.000 0.00 0.00 31.43 2.57
5720 8152 2.322999 CTAAACGGGCGAGGCAATGC 62.323 60.000 0.00 0.00 0.00 3.56
5721 8153 1.024579 ACTAAACGGGCGAGGCAATG 61.025 55.000 0.00 0.00 0.00 2.82
5722 8154 0.322187 AACTAAACGGGCGAGGCAAT 60.322 50.000 0.00 0.00 0.00 3.56
5723 8155 0.952010 GAACTAAACGGGCGAGGCAA 60.952 55.000 0.00 0.00 0.00 4.52
5724 8156 1.375013 GAACTAAACGGGCGAGGCA 60.375 57.895 0.00 0.00 0.00 4.75
5725 8157 2.450345 CGAACTAAACGGGCGAGGC 61.450 63.158 0.00 0.00 0.00 4.70
5726 8158 1.074872 GTCGAACTAAACGGGCGAGG 61.075 60.000 0.00 0.00 0.00 4.63
5727 8159 1.074872 GGTCGAACTAAACGGGCGAG 61.075 60.000 0.00 0.00 0.00 5.03
5728 8160 1.080569 GGTCGAACTAAACGGGCGA 60.081 57.895 0.00 0.00 0.00 5.54
5729 8161 0.171007 TAGGTCGAACTAAACGGGCG 59.829 55.000 7.99 0.00 0.00 6.13
5730 8162 2.591571 ATAGGTCGAACTAAACGGGC 57.408 50.000 15.41 0.00 0.00 6.13
5731 8163 5.050567 GCAAATATAGGTCGAACTAAACGGG 60.051 44.000 15.41 5.92 0.00 5.28
5732 8164 5.751990 AGCAAATATAGGTCGAACTAAACGG 59.248 40.000 15.41 4.85 0.00 4.44
5733 8165 6.823678 AGCAAATATAGGTCGAACTAAACG 57.176 37.500 15.41 3.05 0.00 3.60
5738 8170 9.293404 TGTAGTATAGCAAATATAGGTCGAACT 57.707 33.333 8.66 8.66 0.00 3.01
5739 8171 9.903682 TTGTAGTATAGCAAATATAGGTCGAAC 57.096 33.333 0.00 0.00 0.00 3.95
5742 8174 9.909644 ACTTTGTAGTATAGCAAATATAGGTCG 57.090 33.333 0.00 0.00 34.60 4.79
5778 8210 9.651913 AGAAAACACAATACTTCAAACAAATGT 57.348 25.926 0.00 0.00 0.00 2.71
5781 8213 9.482627 ACAAGAAAACACAATACTTCAAACAAA 57.517 25.926 0.00 0.00 0.00 2.83
5782 8214 8.920665 CACAAGAAAACACAATACTTCAAACAA 58.079 29.630 0.00 0.00 0.00 2.83
5783 8215 7.543868 CCACAAGAAAACACAATACTTCAAACA 59.456 33.333 0.00 0.00 0.00 2.83
5784 8216 7.464045 GCCACAAGAAAACACAATACTTCAAAC 60.464 37.037 0.00 0.00 0.00 2.93
5785 8217 6.533367 GCCACAAGAAAACACAATACTTCAAA 59.467 34.615 0.00 0.00 0.00 2.69
5786 8218 6.039616 GCCACAAGAAAACACAATACTTCAA 58.960 36.000 0.00 0.00 0.00 2.69
5787 8219 5.359576 AGCCACAAGAAAACACAATACTTCA 59.640 36.000 0.00 0.00 0.00 3.02
5788 8220 5.831997 AGCCACAAGAAAACACAATACTTC 58.168 37.500 0.00 0.00 0.00 3.01
5789 8221 5.852282 AGCCACAAGAAAACACAATACTT 57.148 34.783 0.00 0.00 0.00 2.24
5790 8222 5.127031 ACAAGCCACAAGAAAACACAATACT 59.873 36.000 0.00 0.00 0.00 2.12
5791 8223 5.231991 CACAAGCCACAAGAAAACACAATAC 59.768 40.000 0.00 0.00 0.00 1.89
5792 8224 5.347342 CACAAGCCACAAGAAAACACAATA 58.653 37.500 0.00 0.00 0.00 1.90
5793 8225 4.183101 CACAAGCCACAAGAAAACACAAT 58.817 39.130 0.00 0.00 0.00 2.71
5794 8226 3.583806 CACAAGCCACAAGAAAACACAA 58.416 40.909 0.00 0.00 0.00 3.33
5795 8227 2.094286 CCACAAGCCACAAGAAAACACA 60.094 45.455 0.00 0.00 0.00 3.72
5796 8228 2.094234 ACCACAAGCCACAAGAAAACAC 60.094 45.455 0.00 0.00 0.00 3.32
5797 8229 2.175202 ACCACAAGCCACAAGAAAACA 58.825 42.857 0.00 0.00 0.00 2.83
5798 8230 2.959507 ACCACAAGCCACAAGAAAAC 57.040 45.000 0.00 0.00 0.00 2.43
5799 8231 5.606348 AATAACCACAAGCCACAAGAAAA 57.394 34.783 0.00 0.00 0.00 2.29
5800 8232 5.452636 GGAAATAACCACAAGCCACAAGAAA 60.453 40.000 0.00 0.00 0.00 2.52
5801 8233 4.038642 GGAAATAACCACAAGCCACAAGAA 59.961 41.667 0.00 0.00 0.00 2.52
5802 8234 3.572255 GGAAATAACCACAAGCCACAAGA 59.428 43.478 0.00 0.00 0.00 3.02
5803 8235 3.573967 AGGAAATAACCACAAGCCACAAG 59.426 43.478 0.00 0.00 0.00 3.16
5804 8236 3.320541 CAGGAAATAACCACAAGCCACAA 59.679 43.478 0.00 0.00 0.00 3.33
5805 8237 2.890311 CAGGAAATAACCACAAGCCACA 59.110 45.455 0.00 0.00 0.00 4.17
5806 8238 2.890945 ACAGGAAATAACCACAAGCCAC 59.109 45.455 0.00 0.00 0.00 5.01
5807 8239 3.237268 ACAGGAAATAACCACAAGCCA 57.763 42.857 0.00 0.00 0.00 4.75
5808 8240 4.521256 TGTTACAGGAAATAACCACAAGCC 59.479 41.667 0.00 0.00 32.52 4.35
5809 8241 5.458015 GTGTTACAGGAAATAACCACAAGC 58.542 41.667 0.00 0.00 32.52 4.01
5810 8242 5.048294 GGGTGTTACAGGAAATAACCACAAG 60.048 44.000 0.00 0.00 32.52 3.16
5811 8243 4.828387 GGGTGTTACAGGAAATAACCACAA 59.172 41.667 0.00 0.00 32.52 3.33
5812 8244 4.141228 TGGGTGTTACAGGAAATAACCACA 60.141 41.667 0.00 0.00 32.93 4.17
5813 8245 4.216902 GTGGGTGTTACAGGAAATAACCAC 59.783 45.833 5.04 5.04 46.67 4.16
5814 8246 4.400120 GTGGGTGTTACAGGAAATAACCA 58.600 43.478 0.00 0.00 35.23 3.67
5815 8247 3.437741 CGTGGGTGTTACAGGAAATAACC 59.562 47.826 0.00 0.00 32.52 2.85
5816 8248 4.317488 TCGTGGGTGTTACAGGAAATAAC 58.683 43.478 0.00 0.00 33.85 1.89
5817 8249 4.620589 TCGTGGGTGTTACAGGAAATAA 57.379 40.909 0.00 0.00 30.69 1.40
5818 8250 4.509616 CATCGTGGGTGTTACAGGAAATA 58.490 43.478 0.00 0.00 36.48 1.40
5819 8251 3.343617 CATCGTGGGTGTTACAGGAAAT 58.656 45.455 0.00 0.00 36.48 2.17
5820 8252 2.773487 CATCGTGGGTGTTACAGGAAA 58.227 47.619 0.00 0.00 36.48 3.13
5821 8253 1.609580 GCATCGTGGGTGTTACAGGAA 60.610 52.381 0.00 0.00 36.48 3.36
5822 8254 0.036765 GCATCGTGGGTGTTACAGGA 60.037 55.000 0.00 0.00 37.18 3.86
5823 8255 1.358725 CGCATCGTGGGTGTTACAGG 61.359 60.000 0.00 0.00 0.00 4.00
5824 8256 0.389296 TCGCATCGTGGGTGTTACAG 60.389 55.000 0.00 0.00 0.00 2.74
5825 8257 0.668096 GTCGCATCGTGGGTGTTACA 60.668 55.000 0.00 0.00 0.00 2.41
5826 8258 0.389426 AGTCGCATCGTGGGTGTTAC 60.389 55.000 0.00 0.00 0.00 2.50
5827 8259 1.175654 TAGTCGCATCGTGGGTGTTA 58.824 50.000 0.00 0.00 0.00 2.41
5828 8260 0.535335 ATAGTCGCATCGTGGGTGTT 59.465 50.000 0.00 0.00 0.00 3.32
5829 8261 1.395635 TATAGTCGCATCGTGGGTGT 58.604 50.000 0.00 0.00 0.00 4.16
5830 8262 2.229062 AGATATAGTCGCATCGTGGGTG 59.771 50.000 0.00 0.00 0.00 4.61
5831 8263 2.488545 GAGATATAGTCGCATCGTGGGT 59.511 50.000 0.00 0.00 0.00 4.51
5832 8264 2.488153 TGAGATATAGTCGCATCGTGGG 59.512 50.000 0.00 0.00 31.28 4.61
5833 8265 3.058224 TGTGAGATATAGTCGCATCGTGG 60.058 47.826 0.00 0.00 38.91 4.94
5834 8266 3.908978 GTGTGAGATATAGTCGCATCGTG 59.091 47.826 4.55 0.00 38.91 4.35
5835 8267 3.364068 CGTGTGAGATATAGTCGCATCGT 60.364 47.826 4.55 0.00 38.91 3.73
5836 8268 3.156753 CGTGTGAGATATAGTCGCATCG 58.843 50.000 4.55 6.46 38.91 3.84
5837 8269 3.908978 CACGTGTGAGATATAGTCGCATC 59.091 47.826 7.58 0.10 38.91 3.91
5838 8270 3.315470 ACACGTGTGAGATATAGTCGCAT 59.685 43.478 22.71 0.00 38.91 4.73
5839 8271 2.681344 ACACGTGTGAGATATAGTCGCA 59.319 45.455 22.71 0.00 34.03 5.10
5840 8272 3.289911 GACACGTGTGAGATATAGTCGC 58.710 50.000 28.82 2.30 0.00 5.19
5841 8273 3.244579 TCGACACGTGTGAGATATAGTCG 59.755 47.826 28.82 18.47 46.18 4.18
5842 8274 4.318903 CCTCGACACGTGTGAGATATAGTC 60.319 50.000 31.84 14.99 31.31 2.59
5843 8275 3.560481 CCTCGACACGTGTGAGATATAGT 59.440 47.826 31.84 8.34 31.31 2.12
5844 8276 4.135186 CCTCGACACGTGTGAGATATAG 57.865 50.000 31.84 19.49 31.31 1.31


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.