Multiple sequence alignment - TraesCS7A01G313300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G313300 chr7A 100.000 3597 0 0 1 3597 445479264 445482860 0.000000e+00 6643
1 TraesCS7A01G313300 chr7A 95.731 609 26 0 1 609 445470749 445471357 0.000000e+00 981
2 TraesCS7A01G313300 chr7B 90.508 2065 121 32 1564 3595 392802374 392804396 0.000000e+00 2658
3 TraesCS7A01G313300 chr7B 87.683 682 56 14 934 1589 392801670 392802349 0.000000e+00 769
4 TraesCS7A01G313300 chr7D 92.935 1826 93 15 947 2747 393099939 393101753 0.000000e+00 2625
5 TraesCS7A01G313300 chr7D 84.473 863 61 28 2769 3595 393101952 393102777 0.000000e+00 784
6 TraesCS7A01G313300 chr1B 88.034 1170 114 16 1200 2362 375360745 375359595 0.000000e+00 1362
7 TraesCS7A01G313300 chr6D 95.469 618 23 5 1 615 286915634 286916249 0.000000e+00 981
8 TraesCS7A01G313300 chr6D 93.060 317 21 1 607 922 366975598 366975282 2.530000e-126 462
9 TraesCS7A01G313300 chr2D 95.581 611 25 2 1 609 374313468 374314078 0.000000e+00 977
10 TraesCS7A01G313300 chr3A 95.574 610 26 1 1 609 509092822 509093431 0.000000e+00 976
11 TraesCS7A01G313300 chr3A 95.402 609 28 0 1 609 147429706 147429098 0.000000e+00 970
12 TraesCS7A01G313300 chr3A 95.402 609 27 1 1 609 436193018 436192411 0.000000e+00 968
13 TraesCS7A01G313300 chr5D 95.425 612 25 3 1 609 91415428 91414817 0.000000e+00 972
14 TraesCS7A01G313300 chr5D 75.902 1025 201 36 1215 2230 197148597 197149584 1.940000e-132 483
15 TraesCS7A01G313300 chr5D 90.208 337 28 5 1716 2048 551123756 551124091 5.520000e-118 435
16 TraesCS7A01G313300 chr5D 83.072 319 48 6 2063 2376 551124145 551124462 5.880000e-73 285
17 TraesCS7A01G313300 chr1A 95.008 621 28 3 1 620 100966646 100966028 0.000000e+00 972
18 TraesCS7A01G313300 chr1A 88.981 363 29 4 1683 2042 569722852 569723206 4.260000e-119 438
19 TraesCS7A01G313300 chr1A 88.705 363 30 5 1683 2042 569671941 569672295 1.980000e-117 433
20 TraesCS7A01G313300 chr6A 94.703 623 32 1 1 623 366066005 366065384 0.000000e+00 966
21 TraesCS7A01G313300 chr5A 75.707 1025 200 37 1215 2230 227927576 227926592 5.440000e-128 468
22 TraesCS7A01G313300 chr3D 92.523 321 22 2 611 929 29694481 29694801 3.270000e-125 459
23 TraesCS7A01G313300 chr3D 92.744 317 22 1 611 926 434914650 434914334 1.180000e-124 457
24 TraesCS7A01G313300 chr3D 92.429 317 23 1 607 922 448746809 448747125 5.480000e-123 451
25 TraesCS7A01G313300 chr2A 92.767 318 21 2 607 922 115207105 115207422 3.270000e-125 459
26 TraesCS7A01G313300 chr2A 91.793 329 23 3 607 931 753766984 753766656 4.230000e-124 455
27 TraesCS7A01G313300 chr1D 92.212 321 24 1 607 926 487445470 487445150 1.520000e-123 453
28 TraesCS7A01G313300 chr1D 92.429 317 23 1 607 922 95189522 95189206 5.480000e-123 451
29 TraesCS7A01G313300 chr5B 75.418 1017 204 36 1215 2223 213254286 213253308 5.480000e-123 451
30 TraesCS7A01G313300 chr2B 92.429 317 23 1 607 922 150347833 150347517 5.480000e-123 451
31 TraesCS7A01G313300 chr4A 88.618 369 31 5 1683 2048 624470402 624470042 4.260000e-119 438
32 TraesCS7A01G313300 chr3B 89.542 153 11 2 1749 1898 408357220 408357370 4.740000e-44 189
33 TraesCS7A01G313300 chr4B 96.000 75 2 1 2439 2512 642426261 642426335 1.750000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G313300 chr7A 445479264 445482860 3596 False 6643.0 6643 100.0000 1 3597 1 chr7A.!!$F2 3596
1 TraesCS7A01G313300 chr7A 445470749 445471357 608 False 981.0 981 95.7310 1 609 1 chr7A.!!$F1 608
2 TraesCS7A01G313300 chr7B 392801670 392804396 2726 False 1713.5 2658 89.0955 934 3595 2 chr7B.!!$F1 2661
3 TraesCS7A01G313300 chr7D 393099939 393102777 2838 False 1704.5 2625 88.7040 947 3595 2 chr7D.!!$F1 2648
4 TraesCS7A01G313300 chr1B 375359595 375360745 1150 True 1362.0 1362 88.0340 1200 2362 1 chr1B.!!$R1 1162
5 TraesCS7A01G313300 chr6D 286915634 286916249 615 False 981.0 981 95.4690 1 615 1 chr6D.!!$F1 614
6 TraesCS7A01G313300 chr2D 374313468 374314078 610 False 977.0 977 95.5810 1 609 1 chr2D.!!$F1 608
7 TraesCS7A01G313300 chr3A 509092822 509093431 609 False 976.0 976 95.5740 1 609 1 chr3A.!!$F1 608
8 TraesCS7A01G313300 chr3A 147429098 147429706 608 True 970.0 970 95.4020 1 609 1 chr3A.!!$R1 608
9 TraesCS7A01G313300 chr3A 436192411 436193018 607 True 968.0 968 95.4020 1 609 1 chr3A.!!$R2 608
10 TraesCS7A01G313300 chr5D 91414817 91415428 611 True 972.0 972 95.4250 1 609 1 chr5D.!!$R1 608
11 TraesCS7A01G313300 chr5D 197148597 197149584 987 False 483.0 483 75.9020 1215 2230 1 chr5D.!!$F1 1015
12 TraesCS7A01G313300 chr5D 551123756 551124462 706 False 360.0 435 86.6400 1716 2376 2 chr5D.!!$F2 660
13 TraesCS7A01G313300 chr1A 100966028 100966646 618 True 972.0 972 95.0080 1 620 1 chr1A.!!$R1 619
14 TraesCS7A01G313300 chr6A 366065384 366066005 621 True 966.0 966 94.7030 1 623 1 chr6A.!!$R1 622
15 TraesCS7A01G313300 chr5A 227926592 227927576 984 True 468.0 468 75.7070 1215 2230 1 chr5A.!!$R1 1015
16 TraesCS7A01G313300 chr5B 213253308 213254286 978 True 451.0 451 75.4180 1215 2223 1 chr5B.!!$R1 1008

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
770 775 0.034337 TGAACACTAAGGCCACCGTC 59.966 55.0 5.01 0.0 0.00 4.79 F
924 929 0.238289 CGCACGGACTCTTTTGCAAT 59.762 50.0 0.00 0.0 34.49 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2539 2685 0.456221 TCTCTCTCGAATCAACGCCC 59.544 55.0 0.00 0.0 0.00 6.13 R
2920 3260 0.037326 TCGCCTGACTGGAATCACAC 60.037 55.0 1.91 0.0 38.35 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
282 286 5.653769 ACTGTGTTATCTTGCCAGCATATTT 59.346 36.000 0.00 0.00 0.00 1.40
338 342 1.939934 TGTTGCAGACTTTTCAGACGG 59.060 47.619 0.00 0.00 0.00 4.79
362 366 4.156008 GGAGTAAGGTTCGTTAGGTCGTTA 59.844 45.833 0.00 0.00 0.00 3.18
472 476 8.525290 AGCCATATTTACTGCAATAAGTTCTT 57.475 30.769 0.00 0.00 0.00 2.52
559 564 2.107366 TGTCAGCATTACCGATCCAGA 58.893 47.619 0.00 0.00 0.00 3.86
610 615 1.359475 GAGGTCGGGTCGCTACATC 59.641 63.158 0.00 0.00 0.00 3.06
616 621 0.959553 CGGGTCGCTACATCATACCT 59.040 55.000 0.00 0.00 0.00 3.08
617 622 1.068472 CGGGTCGCTACATCATACCTC 60.068 57.143 0.00 0.00 0.00 3.85
618 623 2.240279 GGGTCGCTACATCATACCTCT 58.760 52.381 0.00 0.00 0.00 3.69
619 624 2.029828 GGGTCGCTACATCATACCTCTG 60.030 54.545 0.00 0.00 0.00 3.35
620 625 2.885266 GGTCGCTACATCATACCTCTGA 59.115 50.000 0.00 0.00 0.00 3.27
621 626 3.318275 GGTCGCTACATCATACCTCTGAA 59.682 47.826 0.00 0.00 0.00 3.02
622 627 4.021894 GGTCGCTACATCATACCTCTGAAT 60.022 45.833 0.00 0.00 0.00 2.57
623 628 5.183331 GGTCGCTACATCATACCTCTGAATA 59.817 44.000 0.00 0.00 0.00 1.75
624 629 6.087522 GTCGCTACATCATACCTCTGAATAC 58.912 44.000 0.00 0.00 0.00 1.89
625 630 5.089411 CGCTACATCATACCTCTGAATACG 58.911 45.833 0.00 0.00 0.00 3.06
626 631 5.334957 CGCTACATCATACCTCTGAATACGT 60.335 44.000 0.00 0.00 0.00 3.57
627 632 6.087522 GCTACATCATACCTCTGAATACGTC 58.912 44.000 0.00 0.00 0.00 4.34
628 633 5.109662 ACATCATACCTCTGAATACGTCG 57.890 43.478 0.00 0.00 0.00 5.12
629 634 4.579340 ACATCATACCTCTGAATACGTCGT 59.421 41.667 2.21 2.21 0.00 4.34
630 635 5.761726 ACATCATACCTCTGAATACGTCGTA 59.238 40.000 7.69 7.69 0.00 3.43
631 636 5.919272 TCATACCTCTGAATACGTCGTAG 57.081 43.478 11.31 0.00 0.00 3.51
632 637 4.753610 TCATACCTCTGAATACGTCGTAGG 59.246 45.833 11.31 9.44 0.00 3.18
633 638 3.272574 ACCTCTGAATACGTCGTAGGA 57.727 47.619 14.93 7.88 0.00 2.94
634 639 3.204526 ACCTCTGAATACGTCGTAGGAG 58.795 50.000 14.93 14.84 0.00 3.69
635 640 3.118482 ACCTCTGAATACGTCGTAGGAGA 60.118 47.826 14.93 11.81 0.00 3.71
636 641 3.875727 CCTCTGAATACGTCGTAGGAGAA 59.124 47.826 19.55 4.96 0.00 2.87
637 642 4.334759 CCTCTGAATACGTCGTAGGAGAAA 59.665 45.833 19.55 0.00 0.00 2.52
638 643 5.163683 CCTCTGAATACGTCGTAGGAGAAAA 60.164 44.000 19.55 0.00 0.00 2.29
639 644 5.634896 TCTGAATACGTCGTAGGAGAAAAC 58.365 41.667 11.31 0.00 0.00 2.43
640 645 5.181811 TCTGAATACGTCGTAGGAGAAAACA 59.818 40.000 11.31 2.06 0.00 2.83
641 646 5.771469 TGAATACGTCGTAGGAGAAAACAA 58.229 37.500 11.31 0.00 0.00 2.83
642 647 5.630680 TGAATACGTCGTAGGAGAAAACAAC 59.369 40.000 11.31 0.00 0.00 3.32
643 648 3.441496 ACGTCGTAGGAGAAAACAACA 57.559 42.857 0.00 0.00 0.00 3.33
644 649 3.784338 ACGTCGTAGGAGAAAACAACAA 58.216 40.909 0.00 0.00 0.00 2.83
645 650 4.183101 ACGTCGTAGGAGAAAACAACAAA 58.817 39.130 0.00 0.00 0.00 2.83
646 651 4.812626 ACGTCGTAGGAGAAAACAACAAAT 59.187 37.500 0.00 0.00 0.00 2.32
647 652 5.295045 ACGTCGTAGGAGAAAACAACAAATT 59.705 36.000 0.00 0.00 0.00 1.82
648 653 6.183360 ACGTCGTAGGAGAAAACAACAAATTT 60.183 34.615 0.00 0.00 0.00 1.82
649 654 6.356190 CGTCGTAGGAGAAAACAACAAATTTC 59.644 38.462 0.00 0.00 36.11 2.17
650 655 7.415229 GTCGTAGGAGAAAACAACAAATTTCT 58.585 34.615 0.72 0.72 45.85 2.52
657 662 7.684062 AGAAAACAACAAATTTCTCATCGTG 57.316 32.000 0.00 0.00 40.87 4.35
658 663 7.479980 AGAAAACAACAAATTTCTCATCGTGA 58.520 30.769 0.00 0.00 40.87 4.35
659 664 7.645340 AGAAAACAACAAATTTCTCATCGTGAG 59.355 33.333 8.24 8.24 45.59 3.51
660 665 6.377327 AACAACAAATTTCTCATCGTGAGT 57.623 33.333 12.62 0.00 44.58 3.41
661 666 5.751680 ACAACAAATTTCTCATCGTGAGTG 58.248 37.500 12.62 7.53 44.58 3.51
662 667 5.296780 ACAACAAATTTCTCATCGTGAGTGT 59.703 36.000 12.62 8.00 44.58 3.55
663 668 5.348418 ACAAATTTCTCATCGTGAGTGTG 57.652 39.130 12.62 4.68 44.58 3.82
664 669 5.056480 ACAAATTTCTCATCGTGAGTGTGA 58.944 37.500 12.62 0.00 44.58 3.58
665 670 5.178252 ACAAATTTCTCATCGTGAGTGTGAG 59.822 40.000 12.62 0.00 44.58 3.51
666 671 4.790765 ATTTCTCATCGTGAGTGTGAGA 57.209 40.909 12.62 0.51 44.58 3.27
667 672 3.839051 TTCTCATCGTGAGTGTGAGAG 57.161 47.619 12.62 0.00 46.21 3.20
668 673 3.059352 TCTCATCGTGAGTGTGAGAGA 57.941 47.619 12.62 0.00 44.58 3.10
669 674 3.412386 TCTCATCGTGAGTGTGAGAGAA 58.588 45.455 12.62 0.00 44.58 2.87
670 675 3.821033 TCTCATCGTGAGTGTGAGAGAAA 59.179 43.478 12.62 0.00 44.58 2.52
671 676 4.083057 TCTCATCGTGAGTGTGAGAGAAAG 60.083 45.833 12.62 0.00 44.58 2.62
672 677 2.423926 TCGTGAGTGTGAGAGAAAGC 57.576 50.000 0.00 0.00 0.00 3.51
673 678 1.056103 CGTGAGTGTGAGAGAAAGCG 58.944 55.000 0.00 0.00 0.00 4.68
674 679 1.335051 CGTGAGTGTGAGAGAAAGCGA 60.335 52.381 0.00 0.00 0.00 4.93
675 680 2.323959 GTGAGTGTGAGAGAAAGCGAG 58.676 52.381 0.00 0.00 0.00 5.03
676 681 2.030717 GTGAGTGTGAGAGAAAGCGAGA 60.031 50.000 0.00 0.00 0.00 4.04
677 682 2.227626 TGAGTGTGAGAGAAAGCGAGAG 59.772 50.000 0.00 0.00 0.00 3.20
678 683 2.486203 GAGTGTGAGAGAAAGCGAGAGA 59.514 50.000 0.00 0.00 0.00 3.10
679 684 2.487762 AGTGTGAGAGAAAGCGAGAGAG 59.512 50.000 0.00 0.00 0.00 3.20
680 685 2.486203 GTGTGAGAGAAAGCGAGAGAGA 59.514 50.000 0.00 0.00 0.00 3.10
681 686 2.746904 TGTGAGAGAAAGCGAGAGAGAG 59.253 50.000 0.00 0.00 0.00 3.20
682 687 2.097466 GTGAGAGAAAGCGAGAGAGAGG 59.903 54.545 0.00 0.00 0.00 3.69
683 688 1.676006 GAGAGAAAGCGAGAGAGAGGG 59.324 57.143 0.00 0.00 0.00 4.30
684 689 1.283613 AGAGAAAGCGAGAGAGAGGGA 59.716 52.381 0.00 0.00 0.00 4.20
685 690 1.676006 GAGAAAGCGAGAGAGAGGGAG 59.324 57.143 0.00 0.00 0.00 4.30
686 691 1.283613 AGAAAGCGAGAGAGAGGGAGA 59.716 52.381 0.00 0.00 0.00 3.71
687 692 1.676006 GAAAGCGAGAGAGAGGGAGAG 59.324 57.143 0.00 0.00 0.00 3.20
688 693 0.106719 AAGCGAGAGAGAGGGAGAGG 60.107 60.000 0.00 0.00 0.00 3.69
689 694 0.986019 AGCGAGAGAGAGGGAGAGGA 60.986 60.000 0.00 0.00 0.00 3.71
690 695 0.106918 GCGAGAGAGAGGGAGAGGAA 60.107 60.000 0.00 0.00 0.00 3.36
691 696 1.967319 CGAGAGAGAGGGAGAGGAAG 58.033 60.000 0.00 0.00 0.00 3.46
692 697 1.476833 CGAGAGAGAGGGAGAGGAAGG 60.477 61.905 0.00 0.00 0.00 3.46
693 698 1.850345 GAGAGAGAGGGAGAGGAAGGA 59.150 57.143 0.00 0.00 0.00 3.36
694 699 1.852965 AGAGAGAGGGAGAGGAAGGAG 59.147 57.143 0.00 0.00 0.00 3.69
695 700 1.850345 GAGAGAGGGAGAGGAAGGAGA 59.150 57.143 0.00 0.00 0.00 3.71
696 701 1.852965 AGAGAGGGAGAGGAAGGAGAG 59.147 57.143 0.00 0.00 0.00 3.20
697 702 1.850345 GAGAGGGAGAGGAAGGAGAGA 59.150 57.143 0.00 0.00 0.00 3.10
698 703 1.852965 AGAGGGAGAGGAAGGAGAGAG 59.147 57.143 0.00 0.00 0.00 3.20
699 704 0.933700 AGGGAGAGGAAGGAGAGAGG 59.066 60.000 0.00 0.00 0.00 3.69
700 705 0.930726 GGGAGAGGAAGGAGAGAGGA 59.069 60.000 0.00 0.00 0.00 3.71
701 706 1.289530 GGGAGAGGAAGGAGAGAGGAA 59.710 57.143 0.00 0.00 0.00 3.36
702 707 2.666317 GGAGAGGAAGGAGAGAGGAAG 58.334 57.143 0.00 0.00 0.00 3.46
703 708 2.243736 GGAGAGGAAGGAGAGAGGAAGA 59.756 54.545 0.00 0.00 0.00 2.87
704 709 3.555966 GAGAGGAAGGAGAGAGGAAGAG 58.444 54.545 0.00 0.00 0.00 2.85
705 710 3.197983 AGAGGAAGGAGAGAGGAAGAGA 58.802 50.000 0.00 0.00 0.00 3.10
706 711 3.203040 AGAGGAAGGAGAGAGGAAGAGAG 59.797 52.174 0.00 0.00 0.00 3.20
707 712 3.197983 AGGAAGGAGAGAGGAAGAGAGA 58.802 50.000 0.00 0.00 0.00 3.10
708 713 3.203040 AGGAAGGAGAGAGGAAGAGAGAG 59.797 52.174 0.00 0.00 0.00 3.20
709 714 3.202151 GGAAGGAGAGAGGAAGAGAGAGA 59.798 52.174 0.00 0.00 0.00 3.10
710 715 3.933861 AGGAGAGAGGAAGAGAGAGAC 57.066 52.381 0.00 0.00 0.00 3.36
711 716 2.170607 AGGAGAGAGGAAGAGAGAGACG 59.829 54.545 0.00 0.00 0.00 4.18
712 717 2.093128 GGAGAGAGGAAGAGAGAGACGT 60.093 54.545 0.00 0.00 0.00 4.34
713 718 3.195661 GAGAGAGGAAGAGAGAGACGTC 58.804 54.545 7.70 7.70 0.00 4.34
714 719 2.838202 AGAGAGGAAGAGAGAGACGTCT 59.162 50.000 20.18 20.18 34.86 4.18
715 720 3.263425 AGAGAGGAAGAGAGAGACGTCTT 59.737 47.826 21.08 9.71 35.67 3.01
716 721 4.468510 AGAGAGGAAGAGAGAGACGTCTTA 59.531 45.833 21.08 0.00 33.04 2.10
717 722 4.766375 AGAGGAAGAGAGAGACGTCTTAG 58.234 47.826 21.08 0.00 33.04 2.18
718 723 3.875134 GAGGAAGAGAGAGACGTCTTAGG 59.125 52.174 21.08 0.00 33.04 2.69
719 724 3.520317 AGGAAGAGAGAGACGTCTTAGGA 59.480 47.826 21.08 0.00 33.04 2.94
720 725 4.165372 AGGAAGAGAGAGACGTCTTAGGAT 59.835 45.833 21.08 4.98 33.04 3.24
721 726 4.885325 GGAAGAGAGAGACGTCTTAGGATT 59.115 45.833 21.08 12.24 33.04 3.01
722 727 6.056884 GGAAGAGAGAGACGTCTTAGGATTA 58.943 44.000 21.08 0.00 33.04 1.75
723 728 6.543100 GGAAGAGAGAGACGTCTTAGGATTAA 59.457 42.308 21.08 0.00 33.04 1.40
724 729 6.930667 AGAGAGAGACGTCTTAGGATTAAC 57.069 41.667 21.08 3.10 30.97 2.01
725 730 5.824097 AGAGAGAGACGTCTTAGGATTAACC 59.176 44.000 21.08 2.30 33.77 2.85
726 731 5.507637 AGAGAGACGTCTTAGGATTAACCA 58.492 41.667 21.08 0.00 35.31 3.67
727 732 6.130569 AGAGAGACGTCTTAGGATTAACCAT 58.869 40.000 21.08 0.00 35.31 3.55
728 733 7.288560 AGAGAGACGTCTTAGGATTAACCATA 58.711 38.462 21.08 0.00 35.31 2.74
729 734 7.945664 AGAGAGACGTCTTAGGATTAACCATAT 59.054 37.037 21.08 0.00 35.31 1.78
730 735 8.480133 AGAGACGTCTTAGGATTAACCATATT 57.520 34.615 21.08 0.00 42.04 1.28
731 736 8.578151 AGAGACGTCTTAGGATTAACCATATTC 58.422 37.037 21.08 0.00 42.04 1.75
732 737 8.480133 AGACGTCTTAGGATTAACCATATTCT 57.520 34.615 13.58 0.00 42.04 2.40
733 738 9.584008 AGACGTCTTAGGATTAACCATATTCTA 57.416 33.333 13.58 0.00 42.04 2.10
735 740 9.978044 ACGTCTTAGGATTAACCATATTCTAAC 57.022 33.333 0.00 0.00 42.04 2.34
736 741 9.976511 CGTCTTAGGATTAACCATATTCTAACA 57.023 33.333 0.00 0.00 42.04 2.41
738 743 9.976511 TCTTAGGATTAACCATATTCTAACACG 57.023 33.333 0.00 0.00 42.04 4.49
739 744 9.760077 CTTAGGATTAACCATATTCTAACACGT 57.240 33.333 0.00 0.00 42.04 4.49
742 747 9.457436 AGGATTAACCATATTCTAACACGTTTT 57.543 29.630 0.00 0.00 42.04 2.43
743 748 9.498307 GGATTAACCATATTCTAACACGTTTTG 57.502 33.333 0.00 0.00 38.79 2.44
744 749 9.498307 GATTAACCATATTCTAACACGTTTTGG 57.502 33.333 0.00 0.00 0.00 3.28
745 750 6.887626 AACCATATTCTAACACGTTTTGGT 57.112 33.333 0.00 0.00 36.55 3.67
746 751 6.887626 ACCATATTCTAACACGTTTTGGTT 57.112 33.333 0.00 0.00 31.10 3.67
747 752 7.279750 ACCATATTCTAACACGTTTTGGTTT 57.720 32.000 0.00 0.00 31.10 3.27
748 753 7.718525 ACCATATTCTAACACGTTTTGGTTTT 58.281 30.769 0.00 0.00 31.10 2.43
749 754 7.650104 ACCATATTCTAACACGTTTTGGTTTTG 59.350 33.333 0.00 0.00 31.10 2.44
750 755 7.115663 CCATATTCTAACACGTTTTGGTTTTGG 59.884 37.037 0.00 0.00 0.00 3.28
751 756 5.388408 TTCTAACACGTTTTGGTTTTGGT 57.612 34.783 0.00 0.00 0.00 3.67
752 757 4.734917 TCTAACACGTTTTGGTTTTGGTG 58.265 39.130 0.00 0.00 0.00 4.17
753 758 3.662247 AACACGTTTTGGTTTTGGTGA 57.338 38.095 0.00 0.00 0.00 4.02
754 759 3.662247 ACACGTTTTGGTTTTGGTGAA 57.338 38.095 0.00 0.00 0.00 3.18
755 760 3.318886 ACACGTTTTGGTTTTGGTGAAC 58.681 40.909 0.00 0.00 0.00 3.18
756 761 3.243771 ACACGTTTTGGTTTTGGTGAACA 60.244 39.130 0.00 0.00 0.00 3.18
757 762 3.122111 CACGTTTTGGTTTTGGTGAACAC 59.878 43.478 0.00 0.00 0.00 3.32
758 763 3.006003 ACGTTTTGGTTTTGGTGAACACT 59.994 39.130 4.96 0.00 0.00 3.55
759 764 4.217983 ACGTTTTGGTTTTGGTGAACACTA 59.782 37.500 4.96 0.00 0.00 2.74
760 765 5.162075 CGTTTTGGTTTTGGTGAACACTAA 58.838 37.500 4.96 2.42 0.00 2.24
761 766 5.287513 CGTTTTGGTTTTGGTGAACACTAAG 59.712 40.000 4.96 0.00 33.37 2.18
762 767 4.993029 TTGGTTTTGGTGAACACTAAGG 57.007 40.909 4.96 0.00 33.37 2.69
763 768 2.691011 TGGTTTTGGTGAACACTAAGGC 59.309 45.455 4.96 2.69 33.37 4.35
764 769 2.035449 GGTTTTGGTGAACACTAAGGCC 59.965 50.000 0.00 0.00 33.37 5.19
765 770 2.691011 GTTTTGGTGAACACTAAGGCCA 59.309 45.455 5.01 0.00 33.37 5.36
766 771 1.975660 TTGGTGAACACTAAGGCCAC 58.024 50.000 5.01 0.00 0.00 5.01
767 772 0.109723 TGGTGAACACTAAGGCCACC 59.890 55.000 5.01 0.00 45.47 4.61
768 773 0.953960 GGTGAACACTAAGGCCACCG 60.954 60.000 5.01 0.00 38.03 4.94
769 774 0.250166 GTGAACACTAAGGCCACCGT 60.250 55.000 5.01 0.00 0.00 4.83
770 775 0.034337 TGAACACTAAGGCCACCGTC 59.966 55.000 5.01 0.00 0.00 4.79
771 776 1.005394 AACACTAAGGCCACCGTCG 60.005 57.895 5.01 0.00 0.00 5.12
772 777 2.125673 CACTAAGGCCACCGTCGG 60.126 66.667 10.48 10.48 0.00 4.79
784 789 3.744719 CGTCGGCGAGGGTGAGAA 61.745 66.667 20.92 0.00 41.33 2.87
785 790 2.182030 GTCGGCGAGGGTGAGAAG 59.818 66.667 11.20 0.00 0.00 2.85
786 791 2.035155 TCGGCGAGGGTGAGAAGA 59.965 61.111 4.99 0.00 0.00 2.87
787 792 1.605451 TCGGCGAGGGTGAGAAGAA 60.605 57.895 4.99 0.00 0.00 2.52
788 793 1.153745 CGGCGAGGGTGAGAAGAAG 60.154 63.158 0.00 0.00 0.00 2.85
789 794 1.219393 GGCGAGGGTGAGAAGAAGG 59.781 63.158 0.00 0.00 0.00 3.46
790 795 1.258445 GGCGAGGGTGAGAAGAAGGA 61.258 60.000 0.00 0.00 0.00 3.36
791 796 0.827368 GCGAGGGTGAGAAGAAGGAT 59.173 55.000 0.00 0.00 0.00 3.24
792 797 2.032620 GCGAGGGTGAGAAGAAGGATA 58.967 52.381 0.00 0.00 0.00 2.59
793 798 2.431057 GCGAGGGTGAGAAGAAGGATAA 59.569 50.000 0.00 0.00 0.00 1.75
794 799 3.491792 GCGAGGGTGAGAAGAAGGATAAG 60.492 52.174 0.00 0.00 0.00 1.73
795 800 3.491792 CGAGGGTGAGAAGAAGGATAAGC 60.492 52.174 0.00 0.00 0.00 3.09
796 801 3.452627 GAGGGTGAGAAGAAGGATAAGCA 59.547 47.826 0.00 0.00 0.00 3.91
797 802 3.454082 AGGGTGAGAAGAAGGATAAGCAG 59.546 47.826 0.00 0.00 0.00 4.24
798 803 3.202097 GGTGAGAAGAAGGATAAGCAGC 58.798 50.000 0.00 0.00 0.00 5.25
799 804 3.369892 GGTGAGAAGAAGGATAAGCAGCA 60.370 47.826 0.00 0.00 0.00 4.41
800 805 4.256920 GTGAGAAGAAGGATAAGCAGCAA 58.743 43.478 0.00 0.00 0.00 3.91
801 806 4.094146 GTGAGAAGAAGGATAAGCAGCAAC 59.906 45.833 0.00 0.00 0.00 4.17
802 807 4.256920 GAGAAGAAGGATAAGCAGCAACA 58.743 43.478 0.00 0.00 0.00 3.33
803 808 4.260170 AGAAGAAGGATAAGCAGCAACAG 58.740 43.478 0.00 0.00 0.00 3.16
804 809 3.988976 AGAAGGATAAGCAGCAACAGA 57.011 42.857 0.00 0.00 0.00 3.41
805 810 4.292186 AGAAGGATAAGCAGCAACAGAA 57.708 40.909 0.00 0.00 0.00 3.02
806 811 4.655963 AGAAGGATAAGCAGCAACAGAAA 58.344 39.130 0.00 0.00 0.00 2.52
807 812 5.259632 AGAAGGATAAGCAGCAACAGAAAT 58.740 37.500 0.00 0.00 0.00 2.17
808 813 6.418101 AGAAGGATAAGCAGCAACAGAAATA 58.582 36.000 0.00 0.00 0.00 1.40
809 814 7.059156 AGAAGGATAAGCAGCAACAGAAATAT 58.941 34.615 0.00 0.00 0.00 1.28
810 815 6.630444 AGGATAAGCAGCAACAGAAATATG 57.370 37.500 0.00 0.00 0.00 1.78
811 816 6.359804 AGGATAAGCAGCAACAGAAATATGA 58.640 36.000 0.00 0.00 0.00 2.15
812 817 7.002879 AGGATAAGCAGCAACAGAAATATGAT 58.997 34.615 0.00 0.00 0.00 2.45
813 818 7.040617 AGGATAAGCAGCAACAGAAATATGATG 60.041 37.037 0.00 0.00 33.81 3.07
819 824 3.667261 GCAACAGAAATATGATGCATCGC 59.333 43.478 21.34 10.17 45.36 4.58
820 825 4.556104 GCAACAGAAATATGATGCATCGCT 60.556 41.667 21.34 13.62 45.36 4.93
821 826 5.334337 GCAACAGAAATATGATGCATCGCTA 60.334 40.000 21.34 15.28 45.36 4.26
822 827 6.661669 CAACAGAAATATGATGCATCGCTAA 58.338 36.000 21.34 4.51 0.00 3.09
823 828 6.866010 ACAGAAATATGATGCATCGCTAAA 57.134 33.333 21.34 4.11 0.00 1.85
824 829 7.263100 ACAGAAATATGATGCATCGCTAAAA 57.737 32.000 21.34 3.35 0.00 1.52
825 830 7.879070 ACAGAAATATGATGCATCGCTAAAAT 58.121 30.769 21.34 10.70 0.00 1.82
826 831 9.002600 ACAGAAATATGATGCATCGCTAAAATA 57.997 29.630 21.34 12.46 0.00 1.40
827 832 9.830294 CAGAAATATGATGCATCGCTAAAATAA 57.170 29.630 21.34 1.06 0.00 1.40
830 835 9.630098 AAATATGATGCATCGCTAAAATAAAGG 57.370 29.630 21.34 0.00 0.00 3.11
831 836 6.882610 ATGATGCATCGCTAAAATAAAGGA 57.117 33.333 21.34 0.00 0.00 3.36
832 837 6.304356 TGATGCATCGCTAAAATAAAGGAG 57.696 37.500 21.34 0.00 0.00 3.69
833 838 6.054941 TGATGCATCGCTAAAATAAAGGAGA 58.945 36.000 21.34 0.00 0.00 3.71
834 839 5.734855 TGCATCGCTAAAATAAAGGAGAC 57.265 39.130 0.00 0.00 0.00 3.36
835 840 4.270084 TGCATCGCTAAAATAAAGGAGACG 59.730 41.667 0.00 0.00 0.00 4.18
836 841 4.318831 GCATCGCTAAAATAAAGGAGACGG 60.319 45.833 0.00 0.00 0.00 4.79
837 842 4.724074 TCGCTAAAATAAAGGAGACGGA 57.276 40.909 0.00 0.00 0.00 4.69
838 843 4.427312 TCGCTAAAATAAAGGAGACGGAC 58.573 43.478 0.00 0.00 0.00 4.79
839 844 3.554731 CGCTAAAATAAAGGAGACGGACC 59.445 47.826 0.00 0.00 0.00 4.46
840 845 4.679905 CGCTAAAATAAAGGAGACGGACCT 60.680 45.833 0.00 0.00 39.69 3.85
841 846 5.450965 CGCTAAAATAAAGGAGACGGACCTA 60.451 44.000 0.00 0.00 36.67 3.08
842 847 6.522946 GCTAAAATAAAGGAGACGGACCTAT 58.477 40.000 0.00 0.00 36.67 2.57
843 848 6.990939 GCTAAAATAAAGGAGACGGACCTATT 59.009 38.462 0.00 0.00 36.67 1.73
844 849 7.041984 GCTAAAATAAAGGAGACGGACCTATTG 60.042 40.741 0.00 0.00 36.67 1.90
845 850 5.952347 AATAAAGGAGACGGACCTATTGT 57.048 39.130 0.00 0.00 36.67 2.71
846 851 3.611766 AAAGGAGACGGACCTATTGTG 57.388 47.619 0.00 0.00 36.67 3.33
847 852 1.486211 AGGAGACGGACCTATTGTGG 58.514 55.000 0.00 0.00 35.84 4.17
848 853 1.192428 GGAGACGGACCTATTGTGGT 58.808 55.000 0.00 0.00 44.10 4.16
863 868 9.396022 ACCTATTGTGGTCTTAAATGATAGTTG 57.604 33.333 0.00 0.00 34.86 3.16
864 869 9.396022 CCTATTGTGGTCTTAAATGATAGTTGT 57.604 33.333 0.00 0.00 0.00 3.32
867 872 7.359262 TGTGGTCTTAAATGATAGTTGTTCG 57.641 36.000 0.00 0.00 0.00 3.95
868 873 6.370442 TGTGGTCTTAAATGATAGTTGTTCGG 59.630 38.462 0.00 0.00 0.00 4.30
869 874 6.370718 GTGGTCTTAAATGATAGTTGTTCGGT 59.629 38.462 0.00 0.00 0.00 4.69
870 875 6.938030 TGGTCTTAAATGATAGTTGTTCGGTT 59.062 34.615 0.00 0.00 0.00 4.44
871 876 8.095792 TGGTCTTAAATGATAGTTGTTCGGTTA 58.904 33.333 0.00 0.00 0.00 2.85
872 877 8.938906 GGTCTTAAATGATAGTTGTTCGGTTAA 58.061 33.333 0.00 0.00 0.00 2.01
878 883 7.739498 ATGATAGTTGTTCGGTTAAAAGTGT 57.261 32.000 0.00 0.00 0.00 3.55
879 884 6.950545 TGATAGTTGTTCGGTTAAAAGTGTG 58.049 36.000 0.00 0.00 0.00 3.82
880 885 6.539464 TGATAGTTGTTCGGTTAAAAGTGTGT 59.461 34.615 0.00 0.00 0.00 3.72
881 886 4.976987 AGTTGTTCGGTTAAAAGTGTGTG 58.023 39.130 0.00 0.00 0.00 3.82
882 887 4.456566 AGTTGTTCGGTTAAAAGTGTGTGT 59.543 37.500 0.00 0.00 0.00 3.72
883 888 5.048573 AGTTGTTCGGTTAAAAGTGTGTGTT 60.049 36.000 0.00 0.00 0.00 3.32
884 889 4.724303 TGTTCGGTTAAAAGTGTGTGTTG 58.276 39.130 0.00 0.00 0.00 3.33
885 890 4.215827 TGTTCGGTTAAAAGTGTGTGTTGT 59.784 37.500 0.00 0.00 0.00 3.32
886 891 4.343811 TCGGTTAAAAGTGTGTGTTGTG 57.656 40.909 0.00 0.00 0.00 3.33
887 892 3.752222 TCGGTTAAAAGTGTGTGTTGTGT 59.248 39.130 0.00 0.00 0.00 3.72
888 893 4.215827 TCGGTTAAAAGTGTGTGTTGTGTT 59.784 37.500 0.00 0.00 0.00 3.32
889 894 4.918583 CGGTTAAAAGTGTGTGTTGTGTTT 59.081 37.500 0.00 0.00 0.00 2.83
890 895 5.402867 CGGTTAAAAGTGTGTGTTGTGTTTT 59.597 36.000 0.00 0.00 0.00 2.43
891 896 6.074249 CGGTTAAAAGTGTGTGTTGTGTTTTT 60.074 34.615 0.00 0.00 0.00 1.94
914 919 3.636043 CGTTGCAACGCACGGACT 61.636 61.111 35.89 0.00 46.06 3.85
915 920 2.248431 GTTGCAACGCACGGACTC 59.752 61.111 14.90 0.00 38.71 3.36
916 921 2.108157 TTGCAACGCACGGACTCT 59.892 55.556 0.00 0.00 38.71 3.24
917 922 1.522806 TTGCAACGCACGGACTCTT 60.523 52.632 0.00 0.00 38.71 2.85
918 923 1.092921 TTGCAACGCACGGACTCTTT 61.093 50.000 0.00 0.00 38.71 2.52
919 924 1.092921 TGCAACGCACGGACTCTTTT 61.093 50.000 0.00 0.00 31.71 2.27
920 925 0.657368 GCAACGCACGGACTCTTTTG 60.657 55.000 0.00 0.00 0.00 2.44
921 926 0.657368 CAACGCACGGACTCTTTTGC 60.657 55.000 0.00 0.00 0.00 3.68
922 927 1.092921 AACGCACGGACTCTTTTGCA 61.093 50.000 0.00 0.00 34.49 4.08
923 928 1.092921 ACGCACGGACTCTTTTGCAA 61.093 50.000 0.00 0.00 34.49 4.08
924 929 0.238289 CGCACGGACTCTTTTGCAAT 59.762 50.000 0.00 0.00 34.49 3.56
925 930 1.463056 CGCACGGACTCTTTTGCAATA 59.537 47.619 0.00 0.00 34.49 1.90
926 931 2.095853 CGCACGGACTCTTTTGCAATAT 59.904 45.455 0.00 0.00 34.49 1.28
927 932 3.426159 CGCACGGACTCTTTTGCAATATT 60.426 43.478 0.00 0.00 34.49 1.28
928 933 4.485163 GCACGGACTCTTTTGCAATATTT 58.515 39.130 0.00 0.00 34.97 1.40
929 934 4.558860 GCACGGACTCTTTTGCAATATTTC 59.441 41.667 0.00 0.00 34.97 2.17
930 935 5.095490 CACGGACTCTTTTGCAATATTTCC 58.905 41.667 0.00 2.33 0.00 3.13
931 936 4.157840 ACGGACTCTTTTGCAATATTTCCC 59.842 41.667 0.00 0.00 0.00 3.97
932 937 4.440112 CGGACTCTTTTGCAATATTTCCCC 60.440 45.833 0.00 0.00 0.00 4.81
933 938 4.141937 GGACTCTTTTGCAATATTTCCCCC 60.142 45.833 0.00 0.00 0.00 5.40
934 939 3.447229 ACTCTTTTGCAATATTTCCCCCG 59.553 43.478 0.00 0.00 0.00 5.73
935 940 3.436243 TCTTTTGCAATATTTCCCCCGT 58.564 40.909 0.00 0.00 0.00 5.28
936 941 3.445805 TCTTTTGCAATATTTCCCCCGTC 59.554 43.478 0.00 0.00 0.00 4.79
937 942 2.516227 TTGCAATATTTCCCCCGTCA 57.484 45.000 0.00 0.00 0.00 4.35
938 943 2.051334 TGCAATATTTCCCCCGTCAG 57.949 50.000 0.00 0.00 0.00 3.51
942 947 3.181458 GCAATATTTCCCCCGTCAGACTA 60.181 47.826 0.00 0.00 0.00 2.59
976 981 4.329545 CCACCCCCACGACACCAG 62.330 72.222 0.00 0.00 0.00 4.00
1035 1040 2.377810 ATCCATGGGCTCCGCAGAA 61.378 57.895 13.02 0.00 0.00 3.02
1062 1067 1.373748 GGAGTCGCAGCAAACGGTA 60.374 57.895 0.00 0.00 0.00 4.02
1088 1093 1.890041 CCGCTGTCACCGTGGAAAA 60.890 57.895 0.00 0.00 33.93 2.29
1148 1180 3.960755 TGCAGGGTATCGCATATATAGCT 59.039 43.478 0.00 0.00 31.95 3.32
1153 1185 4.976731 GGGTATCGCATATATAGCTGTTCG 59.023 45.833 0.00 0.00 0.00 3.95
1188 1222 4.986622 AGAATTAGGAAACATCTTTGCGC 58.013 39.130 0.00 0.00 33.10 6.09
1193 1227 3.578688 AGGAAACATCTTTGCGCAAATC 58.421 40.909 33.64 25.44 33.10 2.17
1196 1230 3.367992 AACATCTTTGCGCAAATCACA 57.632 38.095 33.64 18.83 0.00 3.58
1205 1239 0.247814 CGCAAATCACACCGATGCTC 60.248 55.000 0.00 0.00 33.40 4.26
1224 1258 3.490761 GCTCTGACAGAGACAGGCTAATC 60.491 52.174 32.21 9.66 45.07 1.75
1275 1309 2.492484 GTTCCTAGCGAGAAGAGGTTCA 59.508 50.000 0.00 0.00 34.82 3.18
1340 1374 1.662629 GTCATGGTGCTGTTCTCATCG 59.337 52.381 0.00 0.00 0.00 3.84
1343 1377 2.397252 GTGCTGTTCTCATCGCGC 59.603 61.111 0.00 0.00 0.00 6.86
1367 1401 2.244651 AGTCAAGTTCCACGCGCAC 61.245 57.895 5.73 0.00 0.00 5.34
1470 1504 2.743928 GCACGGCAGAGAAGGGTG 60.744 66.667 0.00 0.00 0.00 4.61
1641 1726 0.821517 TGTGCAATACGATCCTCCGT 59.178 50.000 0.00 0.00 45.54 4.69
1692 1778 4.698780 TGATCTGAATTTGACTTGCAGGAG 59.301 41.667 1.40 0.00 0.00 3.69
1710 1796 5.363939 CAGGAGTTCCTCTCATATTTGGAC 58.636 45.833 0.00 0.00 46.65 4.02
1711 1797 4.410555 AGGAGTTCCTCTCATATTTGGACC 59.589 45.833 0.00 0.00 44.77 4.46
1713 1799 5.363939 GAGTTCCTCTCATATTTGGACCTG 58.636 45.833 0.00 0.00 42.34 4.00
1718 1804 4.103785 CCTCTCATATTTGGACCTGTGGAT 59.896 45.833 0.00 0.00 0.00 3.41
1771 1857 6.319405 CAGGATTACATTCATCATGTTGGACA 59.681 38.462 3.98 0.00 44.40 4.02
1838 1927 3.956744 ACTGCCCCAAGAATTAGAGTTC 58.043 45.455 0.00 0.00 0.00 3.01
1891 1980 6.621596 GCACCGAGATAATATGGCATTTCTTC 60.622 42.308 4.78 0.00 0.00 2.87
2119 2255 2.338500 GTTGGCGAGAACTACTTCCTG 58.662 52.381 0.00 0.00 0.00 3.86
2232 2368 5.957842 TTGAAGGTAAAATGCTTGTCGAT 57.042 34.783 0.00 0.00 0.00 3.59
2381 2526 7.524367 GCTGATATTATTTTCATCACCCCCAAG 60.524 40.741 0.00 0.00 0.00 3.61
2402 2547 2.618709 GTTGGAGTTTGGGACTTGACAG 59.381 50.000 0.00 0.00 39.19 3.51
2408 2553 5.450550 GGAGTTTGGGACTTGACAGAAAAAG 60.451 44.000 0.00 0.00 39.19 2.27
2409 2554 5.261216 AGTTTGGGACTTGACAGAAAAAGA 58.739 37.500 0.00 0.00 33.92 2.52
2410 2555 5.125578 AGTTTGGGACTTGACAGAAAAAGAC 59.874 40.000 0.00 0.00 33.92 3.01
2413 2558 4.640201 TGGGACTTGACAGAAAAAGACAAG 59.360 41.667 0.00 0.00 41.98 3.16
2436 2582 8.571336 CAAGAAAAAGACTAATGTCCAGTTCAT 58.429 33.333 0.00 0.00 43.91 2.57
2539 2685 9.262358 GCTATGAAGAAAGTAGGTTATAACAGG 57.738 37.037 17.16 0.00 0.00 4.00
2543 2689 3.832615 AAGTAGGTTATAACAGGGGCG 57.167 47.619 17.16 0.00 0.00 6.13
2580 2726 1.746727 CGAAAGAGGCGTCGCATCAG 61.747 60.000 30.73 16.24 42.11 2.90
2606 2752 7.442364 GTGCTGCAGATCCTTAATTATAACTGA 59.558 37.037 20.43 0.00 0.00 3.41
2609 2755 9.330063 CTGCAGATCCTTAATTATAACTGACAA 57.670 33.333 8.42 0.00 0.00 3.18
2641 2789 2.497675 TCCAGAGAGGGTCAGATTTTCG 59.502 50.000 0.00 0.00 38.24 3.46
2672 2820 4.392921 AAGATGTCGGAGGTGATAACAG 57.607 45.455 0.00 0.00 0.00 3.16
2685 2833 4.378874 GGTGATAACAGCAGAGCTTTGAAC 60.379 45.833 8.73 0.00 43.08 3.18
2716 2864 4.201724 GCTCTGTACAATTTTGCTAGACGG 60.202 45.833 0.00 0.00 0.00 4.79
2792 3117 8.049721 ACTATGTAAGCTTAATCCTTCTTTGCT 58.950 33.333 7.99 0.00 0.00 3.91
2796 3121 6.993786 AAGCTTAATCCTTCTTTGCTCTAC 57.006 37.500 0.00 0.00 0.00 2.59
2817 3146 8.443953 TCTACTAATTTTACTACGGAGGAGTC 57.556 38.462 0.00 0.00 0.00 3.36
2818 3147 6.462552 ACTAATTTTACTACGGAGGAGTCC 57.537 41.667 0.00 0.00 39.88 3.85
2828 3157 2.290323 ACGGAGGAGTCCAAAATTGAGG 60.290 50.000 12.86 0.00 44.18 3.86
2838 3167 5.536538 AGTCCAAAATTGAGGGAGAAAACTC 59.463 40.000 0.00 0.00 0.00 3.01
2870 3203 9.630098 AGAAATATTTACAACAACAGCATCTTG 57.370 29.630 0.00 0.00 0.00 3.02
2871 3204 9.624697 GAAATATTTACAACAACAGCATCTTGA 57.375 29.630 0.00 0.00 0.00 3.02
2874 3207 9.793252 ATATTTACAACAACAGCATCTTGATTC 57.207 29.630 0.00 0.00 0.00 2.52
2875 3208 4.510038 ACAACAACAGCATCTTGATTCC 57.490 40.909 0.00 0.00 0.00 3.01
2876 3209 4.147321 ACAACAACAGCATCTTGATTCCT 58.853 39.130 0.00 0.00 0.00 3.36
2894 3234 1.347707 CCTGAGCCTACCACTGACAAA 59.652 52.381 0.00 0.00 0.00 2.83
2896 3236 1.270839 TGAGCCTACCACTGACAAAGC 60.271 52.381 0.00 0.00 0.00 3.51
2899 3239 1.813513 CCTACCACTGACAAAGCAGG 58.186 55.000 0.00 0.00 40.20 4.85
2900 3240 1.611673 CCTACCACTGACAAAGCAGGG 60.612 57.143 0.00 0.00 40.20 4.45
2908 3248 1.228367 ACAAAGCAGGGGTGAGCTG 60.228 57.895 0.00 0.00 0.00 4.24
2920 3260 0.867753 GTGAGCTGACGCGGACTATG 60.868 60.000 12.47 0.00 42.32 2.23
2922 3262 0.867753 GAGCTGACGCGGACTATGTG 60.868 60.000 12.47 0.00 42.32 3.21
2931 3271 2.205074 GCGGACTATGTGTGATTCCAG 58.795 52.381 0.00 0.00 0.00 3.86
2938 3278 0.320683 TGTGTGATTCCAGTCAGGCG 60.321 55.000 0.00 0.00 37.29 5.52
2954 3294 3.531538 CAGGCGATTACAACCTGTGTAT 58.468 45.455 0.00 0.00 44.91 2.29
2955 3295 4.689071 CAGGCGATTACAACCTGTGTATA 58.311 43.478 0.00 0.00 44.91 1.47
2956 3296 4.506654 CAGGCGATTACAACCTGTGTATAC 59.493 45.833 0.00 0.00 44.91 1.47
2961 3301 6.036735 GCGATTACAACCTGTGTATACAACAT 59.963 38.462 7.25 0.00 42.37 2.71
2988 3332 2.100584 AGAGGAGCTGATGAACTAAGCG 59.899 50.000 0.00 0.00 41.88 4.68
2991 3335 0.179000 AGCTGATGAACTAAGCGGGG 59.821 55.000 0.00 0.00 41.88 5.73
2994 3338 1.887707 GATGAACTAAGCGGGGGCG 60.888 63.158 0.00 0.00 0.00 6.13
3084 3428 2.014068 GCCAAGTAGCTCCGCTTGAAT 61.014 52.381 20.39 0.00 43.29 2.57
3088 3432 1.410882 AGTAGCTCCGCTTGAATCTCC 59.589 52.381 0.00 0.00 40.44 3.71
3166 3510 1.604593 CCACCACCTTGCCTCCTTG 60.605 63.158 0.00 0.00 0.00 3.61
3177 3521 1.334384 GCCTCCTTGTCCTCCTCCTC 61.334 65.000 0.00 0.00 0.00 3.71
3198 3542 4.821589 GCCGCCGTCTCCCTCTTG 62.822 72.222 0.00 0.00 0.00 3.02
3199 3543 4.148825 CCGCCGTCTCCCTCTTGG 62.149 72.222 0.00 0.00 0.00 3.61
3249 3593 1.200716 CCTTCGTCGTGTGTAAGCCTA 59.799 52.381 0.00 0.00 0.00 3.93
3266 3610 2.493675 GCCTATGCACCATCTCGATCTA 59.506 50.000 0.00 0.00 37.47 1.98
3267 3611 3.674682 GCCTATGCACCATCTCGATCTAC 60.675 52.174 0.00 0.00 37.47 2.59
3271 3615 1.759994 CACCATCTCGATCTACGTGC 58.240 55.000 0.00 0.00 43.13 5.34
3388 3764 1.595982 CGTGCGTGCATCCGTTTTTG 61.596 55.000 0.00 0.00 0.00 2.44
3389 3765 1.007964 TGCGTGCATCCGTTTTTGG 60.008 52.632 0.00 0.00 0.00 3.28
3390 3766 2.371923 GCGTGCATCCGTTTTTGGC 61.372 57.895 0.00 0.00 0.00 4.52
3393 3769 2.809174 GCATCCGTTTTTGGCCGC 60.809 61.111 0.00 0.00 0.00 6.53
3394 3770 2.961768 CATCCGTTTTTGGCCGCT 59.038 55.556 0.00 0.00 0.00 5.52
3395 3771 1.444212 CATCCGTTTTTGGCCGCTG 60.444 57.895 0.00 0.00 0.00 5.18
3396 3772 1.901464 ATCCGTTTTTGGCCGCTGT 60.901 52.632 0.00 0.00 0.00 4.40
3397 3773 2.141122 ATCCGTTTTTGGCCGCTGTG 62.141 55.000 0.00 0.00 0.00 3.66
3398 3774 2.411290 CGTTTTTGGCCGCTGTGT 59.589 55.556 0.00 0.00 0.00 3.72
3399 3775 1.943693 CGTTTTTGGCCGCTGTGTG 60.944 57.895 0.00 0.00 0.00 3.82
3400 3776 2.105930 TTTTTGGCCGCTGTGTGC 59.894 55.556 0.00 0.00 38.57 4.57
3401 3777 2.714991 TTTTTGGCCGCTGTGTGCA 61.715 52.632 0.00 0.00 43.06 4.57
3402 3778 2.025767 TTTTTGGCCGCTGTGTGCAT 62.026 50.000 0.00 0.00 43.06 3.96
3403 3779 2.025767 TTTTGGCCGCTGTGTGCATT 62.026 50.000 0.00 0.00 43.06 3.56
3404 3780 2.696409 TTTGGCCGCTGTGTGCATTG 62.696 55.000 0.00 0.00 43.06 2.82
3406 3782 4.345962 GCCGCTGTGTGCATTGCA 62.346 61.111 7.38 7.38 43.06 4.08
3407 3783 2.569657 CCGCTGTGTGCATTGCAT 59.430 55.556 15.49 0.00 41.91 3.96
3408 3784 1.515519 CCGCTGTGTGCATTGCATC 60.516 57.895 15.49 11.58 41.91 3.91
3409 3785 1.504900 CGCTGTGTGCATTGCATCT 59.495 52.632 15.49 0.00 41.91 2.90
3410 3786 0.109458 CGCTGTGTGCATTGCATCTT 60.109 50.000 15.49 0.00 41.91 2.40
3411 3787 1.346365 GCTGTGTGCATTGCATCTTG 58.654 50.000 15.49 7.36 41.91 3.02
3412 3788 1.990799 CTGTGTGCATTGCATCTTGG 58.009 50.000 15.49 1.34 41.91 3.61
3413 3789 0.038067 TGTGTGCATTGCATCTTGGC 60.038 50.000 15.49 1.01 41.91 4.52
3414 3790 0.738412 GTGTGCATTGCATCTTGGCC 60.738 55.000 15.49 0.00 41.91 5.36
3415 3791 1.186267 TGTGCATTGCATCTTGGCCA 61.186 50.000 15.49 0.00 41.91 5.36
3416 3792 0.459585 GTGCATTGCATCTTGGCCAG 60.460 55.000 15.49 0.00 41.91 4.85
3417 3793 0.612453 TGCATTGCATCTTGGCCAGA 60.612 50.000 7.38 6.43 31.71 3.86
3418 3794 0.179119 GCATTGCATCTTGGCCAGAC 60.179 55.000 5.11 0.00 32.83 3.51
3419 3795 1.179152 CATTGCATCTTGGCCAGACA 58.821 50.000 5.11 0.00 32.83 3.41
3435 3819 3.381045 CAGACACGTGACATGTAACACT 58.619 45.455 25.01 4.23 35.23 3.55
3451 3835 3.703804 ACTCCCAGTGATTCCCGTA 57.296 52.632 0.00 0.00 0.00 4.02
3452 3836 1.946984 ACTCCCAGTGATTCCCGTAA 58.053 50.000 0.00 0.00 0.00 3.18
3460 3844 4.261801 CAGTGATTCCCGTAAATTGGTCT 58.738 43.478 0.00 0.00 0.00 3.85
3472 3856 7.282450 CCCGTAAATTGGTCTTAAGCTTATCTT 59.718 37.037 7.08 0.00 38.79 2.40
3481 3865 7.716998 TGGTCTTAAGCTTATCTTCATGGATTC 59.283 37.037 7.08 0.00 36.25 2.52
3482 3866 7.716998 GGTCTTAAGCTTATCTTCATGGATTCA 59.283 37.037 7.08 0.00 36.25 2.57
3495 3879 2.715046 TGGATTCATGAGTGAACAGCC 58.285 47.619 0.00 0.00 46.43 4.85
3496 3880 1.667724 GGATTCATGAGTGAACAGCCG 59.332 52.381 0.00 0.00 46.43 5.52
3497 3881 1.667724 GATTCATGAGTGAACAGCCGG 59.332 52.381 0.00 0.00 46.43 6.13
3498 3882 0.955428 TTCATGAGTGAACAGCCGGC 60.955 55.000 21.89 21.89 39.36 6.13
3499 3883 2.045926 ATGAGTGAACAGCCGGCC 60.046 61.111 26.15 8.39 0.00 6.13
3500 3884 2.596851 ATGAGTGAACAGCCGGCCT 61.597 57.895 26.15 12.29 0.00 5.19
3501 3885 2.032681 GAGTGAACAGCCGGCCTT 59.967 61.111 26.15 15.56 0.00 4.35
3511 3895 2.956987 CCGGCCTTTGAGTGCAAG 59.043 61.111 0.00 0.00 35.04 4.01
3515 3899 0.746659 GGCCTTTGAGTGCAAGTTGT 59.253 50.000 4.48 0.00 35.04 3.32
3537 3921 2.739932 CGGGAACTCGATCAGAATGCTT 60.740 50.000 0.00 0.00 34.76 3.91
3550 3934 2.977405 AATGCTTCTGCGTTTGTCTC 57.023 45.000 0.00 0.00 45.18 3.36
3557 3941 4.440214 GCGTTTGTCTCGCCAATG 57.560 55.556 0.00 0.00 46.61 2.82
3595 3979 0.310543 GCGTGCATCTGGTTTTGACA 59.689 50.000 0.00 0.00 0.00 3.58
3596 3980 1.925946 GCGTGCATCTGGTTTTGACAC 60.926 52.381 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 93 4.104738 TGAGAAGGTTCCTCCAACTCAATT 59.895 41.667 0.00 0.00 42.54 2.32
155 158 4.039852 GCCAATTTTCCCCTACAACAAAGA 59.960 41.667 0.00 0.00 0.00 2.52
282 286 1.872952 CGAAAACAGGTCAGCACATGA 59.127 47.619 0.00 0.00 36.34 3.07
295 299 0.814410 TACGTTGCAGCCCGAAAACA 60.814 50.000 8.43 0.00 0.00 2.83
338 342 2.159324 CGACCTAACGAACCTTACTCCC 60.159 54.545 0.00 0.00 35.09 4.30
362 366 1.153489 CATAGCTGAGCTGCACGGT 60.153 57.895 18.79 0.86 40.10 4.83
559 564 2.896044 TCTCTGTGCTTCAGTGTCATCT 59.104 45.455 8.75 0.00 43.97 2.90
610 615 4.753610 TCCTACGACGTATTCAGAGGTATG 59.246 45.833 8.39 0.00 30.55 2.39
616 621 5.181811 TGTTTTCTCCTACGACGTATTCAGA 59.818 40.000 8.39 7.29 0.00 3.27
617 622 5.396484 TGTTTTCTCCTACGACGTATTCAG 58.604 41.667 8.39 5.08 0.00 3.02
618 623 5.375417 TGTTTTCTCCTACGACGTATTCA 57.625 39.130 8.39 0.00 0.00 2.57
619 624 5.630680 TGTTGTTTTCTCCTACGACGTATTC 59.369 40.000 8.39 0.00 32.43 1.75
620 625 5.531634 TGTTGTTTTCTCCTACGACGTATT 58.468 37.500 8.39 0.00 32.43 1.89
621 626 5.125100 TGTTGTTTTCTCCTACGACGTAT 57.875 39.130 8.39 0.00 32.43 3.06
622 627 4.566545 TGTTGTTTTCTCCTACGACGTA 57.433 40.909 7.60 7.60 32.43 3.57
623 628 3.441496 TGTTGTTTTCTCCTACGACGT 57.559 42.857 5.52 5.52 32.43 4.34
624 629 4.782252 TTTGTTGTTTTCTCCTACGACG 57.218 40.909 0.00 0.00 32.43 5.12
625 630 7.415229 AGAAATTTGTTGTTTTCTCCTACGAC 58.585 34.615 0.00 0.00 37.58 4.34
626 631 7.562454 AGAAATTTGTTGTTTTCTCCTACGA 57.438 32.000 0.00 0.00 37.58 3.43
627 632 7.837898 GAGAAATTTGTTGTTTTCTCCTACG 57.162 36.000 12.26 0.00 46.25 3.51
633 638 7.479980 TCACGATGAGAAATTTGTTGTTTTCT 58.520 30.769 0.00 0.00 43.12 2.52
634 639 7.678194 TCACGATGAGAAATTTGTTGTTTTC 57.322 32.000 0.00 0.00 33.08 2.29
650 655 3.612717 GCTTTCTCTCACACTCACGATGA 60.613 47.826 0.00 0.00 0.00 2.92
651 656 2.665537 GCTTTCTCTCACACTCACGATG 59.334 50.000 0.00 0.00 0.00 3.84
652 657 2.669670 CGCTTTCTCTCACACTCACGAT 60.670 50.000 0.00 0.00 0.00 3.73
653 658 1.335051 CGCTTTCTCTCACACTCACGA 60.335 52.381 0.00 0.00 0.00 4.35
654 659 1.056103 CGCTTTCTCTCACACTCACG 58.944 55.000 0.00 0.00 0.00 4.35
655 660 2.030717 TCTCGCTTTCTCTCACACTCAC 60.031 50.000 0.00 0.00 0.00 3.51
656 661 2.227626 CTCTCGCTTTCTCTCACACTCA 59.772 50.000 0.00 0.00 0.00 3.41
657 662 2.486203 TCTCTCGCTTTCTCTCACACTC 59.514 50.000 0.00 0.00 0.00 3.51
658 663 2.487762 CTCTCTCGCTTTCTCTCACACT 59.512 50.000 0.00 0.00 0.00 3.55
659 664 2.486203 TCTCTCTCGCTTTCTCTCACAC 59.514 50.000 0.00 0.00 0.00 3.82
660 665 2.746904 CTCTCTCTCGCTTTCTCTCACA 59.253 50.000 0.00 0.00 0.00 3.58
661 666 2.097466 CCTCTCTCTCGCTTTCTCTCAC 59.903 54.545 0.00 0.00 0.00 3.51
662 667 2.364632 CCTCTCTCTCGCTTTCTCTCA 58.635 52.381 0.00 0.00 0.00 3.27
663 668 1.676006 CCCTCTCTCTCGCTTTCTCTC 59.324 57.143 0.00 0.00 0.00 3.20
664 669 1.283613 TCCCTCTCTCTCGCTTTCTCT 59.716 52.381 0.00 0.00 0.00 3.10
665 670 1.676006 CTCCCTCTCTCTCGCTTTCTC 59.324 57.143 0.00 0.00 0.00 2.87
666 671 1.283613 TCTCCCTCTCTCTCGCTTTCT 59.716 52.381 0.00 0.00 0.00 2.52
667 672 1.676006 CTCTCCCTCTCTCTCGCTTTC 59.324 57.143 0.00 0.00 0.00 2.62
668 673 1.684869 CCTCTCCCTCTCTCTCGCTTT 60.685 57.143 0.00 0.00 0.00 3.51
669 674 0.106719 CCTCTCCCTCTCTCTCGCTT 60.107 60.000 0.00 0.00 0.00 4.68
670 675 0.986019 TCCTCTCCCTCTCTCTCGCT 60.986 60.000 0.00 0.00 0.00 4.93
671 676 0.106918 TTCCTCTCCCTCTCTCTCGC 60.107 60.000 0.00 0.00 0.00 5.03
672 677 1.476833 CCTTCCTCTCCCTCTCTCTCG 60.477 61.905 0.00 0.00 0.00 4.04
673 678 1.850345 TCCTTCCTCTCCCTCTCTCTC 59.150 57.143 0.00 0.00 0.00 3.20
674 679 1.852965 CTCCTTCCTCTCCCTCTCTCT 59.147 57.143 0.00 0.00 0.00 3.10
675 680 1.850345 TCTCCTTCCTCTCCCTCTCTC 59.150 57.143 0.00 0.00 0.00 3.20
676 681 1.852965 CTCTCCTTCCTCTCCCTCTCT 59.147 57.143 0.00 0.00 0.00 3.10
677 682 1.850345 TCTCTCCTTCCTCTCCCTCTC 59.150 57.143 0.00 0.00 0.00 3.20
678 683 1.852965 CTCTCTCCTTCCTCTCCCTCT 59.147 57.143 0.00 0.00 0.00 3.69
679 684 1.133482 CCTCTCTCCTTCCTCTCCCTC 60.133 61.905 0.00 0.00 0.00 4.30
680 685 0.933700 CCTCTCTCCTTCCTCTCCCT 59.066 60.000 0.00 0.00 0.00 4.20
681 686 0.930726 TCCTCTCTCCTTCCTCTCCC 59.069 60.000 0.00 0.00 0.00 4.30
682 687 2.243736 TCTTCCTCTCTCCTTCCTCTCC 59.756 54.545 0.00 0.00 0.00 3.71
683 688 3.202151 TCTCTTCCTCTCTCCTTCCTCTC 59.798 52.174 0.00 0.00 0.00 3.20
684 689 3.197983 TCTCTTCCTCTCTCCTTCCTCT 58.802 50.000 0.00 0.00 0.00 3.69
685 690 3.202151 TCTCTCTTCCTCTCTCCTTCCTC 59.798 52.174 0.00 0.00 0.00 3.71
686 691 3.197983 TCTCTCTTCCTCTCTCCTTCCT 58.802 50.000 0.00 0.00 0.00 3.36
687 692 3.202151 TCTCTCTCTTCCTCTCTCCTTCC 59.798 52.174 0.00 0.00 0.00 3.46
688 693 4.200092 GTCTCTCTCTTCCTCTCTCCTTC 58.800 52.174 0.00 0.00 0.00 3.46
689 694 3.370527 CGTCTCTCTCTTCCTCTCTCCTT 60.371 52.174 0.00 0.00 0.00 3.36
690 695 2.170607 CGTCTCTCTCTTCCTCTCTCCT 59.829 54.545 0.00 0.00 0.00 3.69
691 696 2.093128 ACGTCTCTCTCTTCCTCTCTCC 60.093 54.545 0.00 0.00 0.00 3.71
692 697 3.118738 AGACGTCTCTCTCTTCCTCTCTC 60.119 52.174 13.58 0.00 0.00 3.20
693 698 2.838202 AGACGTCTCTCTCTTCCTCTCT 59.162 50.000 13.58 0.00 0.00 3.10
694 699 3.261981 AGACGTCTCTCTCTTCCTCTC 57.738 52.381 13.58 0.00 0.00 3.20
695 700 3.713826 AAGACGTCTCTCTCTTCCTCT 57.286 47.619 20.33 0.00 0.00 3.69
696 701 3.875134 CCTAAGACGTCTCTCTCTTCCTC 59.125 52.174 20.33 0.00 0.00 3.71
697 702 3.520317 TCCTAAGACGTCTCTCTCTTCCT 59.480 47.826 20.33 1.83 0.00 3.36
698 703 3.876341 TCCTAAGACGTCTCTCTCTTCC 58.124 50.000 20.33 0.00 0.00 3.46
699 704 7.412063 GTTAATCCTAAGACGTCTCTCTCTTC 58.588 42.308 20.33 1.79 0.00 2.87
700 705 6.319405 GGTTAATCCTAAGACGTCTCTCTCTT 59.681 42.308 20.33 12.36 0.00 2.85
701 706 5.824097 GGTTAATCCTAAGACGTCTCTCTCT 59.176 44.000 20.33 5.11 0.00 3.10
702 707 5.589452 TGGTTAATCCTAAGACGTCTCTCTC 59.411 44.000 20.33 3.11 37.07 3.20
703 708 5.507637 TGGTTAATCCTAAGACGTCTCTCT 58.492 41.667 20.33 5.95 37.07 3.10
704 709 5.831702 TGGTTAATCCTAAGACGTCTCTC 57.168 43.478 20.33 0.00 37.07 3.20
705 710 8.480133 AATATGGTTAATCCTAAGACGTCTCT 57.520 34.615 20.33 11.63 37.07 3.10
706 711 8.578151 AGAATATGGTTAATCCTAAGACGTCTC 58.422 37.037 20.33 2.31 37.07 3.36
707 712 8.480133 AGAATATGGTTAATCCTAAGACGTCT 57.520 34.615 13.58 13.58 37.07 4.18
709 714 9.978044 GTTAGAATATGGTTAATCCTAAGACGT 57.022 33.333 0.00 0.00 37.07 4.34
710 715 9.976511 TGTTAGAATATGGTTAATCCTAAGACG 57.023 33.333 0.00 0.00 37.07 4.18
712 717 9.976511 CGTGTTAGAATATGGTTAATCCTAAGA 57.023 33.333 0.00 0.00 37.07 2.10
713 718 9.760077 ACGTGTTAGAATATGGTTAATCCTAAG 57.240 33.333 0.00 0.00 37.07 2.18
716 721 9.457436 AAAACGTGTTAGAATATGGTTAATCCT 57.543 29.630 0.00 0.00 37.07 3.24
717 722 9.498307 CAAAACGTGTTAGAATATGGTTAATCC 57.502 33.333 0.00 0.00 0.00 3.01
718 723 9.498307 CCAAAACGTGTTAGAATATGGTTAATC 57.502 33.333 0.00 0.00 0.00 1.75
719 724 9.016438 ACCAAAACGTGTTAGAATATGGTTAAT 57.984 29.630 0.00 0.00 35.20 1.40
720 725 8.393671 ACCAAAACGTGTTAGAATATGGTTAA 57.606 30.769 0.00 0.00 35.20 2.01
721 726 7.982761 ACCAAAACGTGTTAGAATATGGTTA 57.017 32.000 0.00 0.00 35.20 2.85
722 727 6.887626 ACCAAAACGTGTTAGAATATGGTT 57.112 33.333 0.00 0.00 35.20 3.67
723 728 6.887626 AACCAAAACGTGTTAGAATATGGT 57.112 33.333 0.00 0.00 40.19 3.55
724 729 7.115663 CCAAAACCAAAACGTGTTAGAATATGG 59.884 37.037 0.00 0.00 0.00 2.74
725 730 7.650104 ACCAAAACCAAAACGTGTTAGAATATG 59.350 33.333 0.00 0.00 0.00 1.78
726 731 7.650104 CACCAAAACCAAAACGTGTTAGAATAT 59.350 33.333 0.00 0.00 0.00 1.28
727 732 6.973474 CACCAAAACCAAAACGTGTTAGAATA 59.027 34.615 0.00 0.00 0.00 1.75
728 733 5.808030 CACCAAAACCAAAACGTGTTAGAAT 59.192 36.000 0.00 0.00 0.00 2.40
729 734 5.048224 TCACCAAAACCAAAACGTGTTAGAA 60.048 36.000 0.00 0.00 0.00 2.10
730 735 4.458295 TCACCAAAACCAAAACGTGTTAGA 59.542 37.500 0.00 0.00 0.00 2.10
731 736 4.734917 TCACCAAAACCAAAACGTGTTAG 58.265 39.130 0.00 0.00 0.00 2.34
732 737 4.778534 TCACCAAAACCAAAACGTGTTA 57.221 36.364 0.00 0.00 0.00 2.41
733 738 3.662247 TCACCAAAACCAAAACGTGTT 57.338 38.095 0.00 0.00 0.00 3.32
734 739 3.243771 TGTTCACCAAAACCAAAACGTGT 60.244 39.130 0.00 0.00 0.00 4.49
735 740 3.122111 GTGTTCACCAAAACCAAAACGTG 59.878 43.478 0.00 0.00 0.00 4.49
736 741 3.006003 AGTGTTCACCAAAACCAAAACGT 59.994 39.130 0.00 0.00 0.00 3.99
737 742 3.580731 AGTGTTCACCAAAACCAAAACG 58.419 40.909 0.00 0.00 0.00 3.60
738 743 5.579119 CCTTAGTGTTCACCAAAACCAAAAC 59.421 40.000 0.00 0.00 0.00 2.43
739 744 5.725362 CCTTAGTGTTCACCAAAACCAAAA 58.275 37.500 0.00 0.00 0.00 2.44
740 745 4.382147 GCCTTAGTGTTCACCAAAACCAAA 60.382 41.667 0.00 0.00 0.00 3.28
741 746 3.131400 GCCTTAGTGTTCACCAAAACCAA 59.869 43.478 0.00 0.00 0.00 3.67
742 747 2.691011 GCCTTAGTGTTCACCAAAACCA 59.309 45.455 0.00 0.00 0.00 3.67
743 748 2.035449 GGCCTTAGTGTTCACCAAAACC 59.965 50.000 0.00 0.00 0.00 3.27
744 749 2.691011 TGGCCTTAGTGTTCACCAAAAC 59.309 45.455 3.32 0.00 0.00 2.43
745 750 2.691011 GTGGCCTTAGTGTTCACCAAAA 59.309 45.455 3.32 0.00 0.00 2.44
746 751 2.303175 GTGGCCTTAGTGTTCACCAAA 58.697 47.619 3.32 0.00 0.00 3.28
747 752 1.477923 GGTGGCCTTAGTGTTCACCAA 60.478 52.381 3.32 0.00 45.11 3.67
748 753 0.109723 GGTGGCCTTAGTGTTCACCA 59.890 55.000 3.32 0.00 45.11 4.17
749 754 0.953960 CGGTGGCCTTAGTGTTCACC 60.954 60.000 3.32 0.00 43.06 4.02
750 755 0.250166 ACGGTGGCCTTAGTGTTCAC 60.250 55.000 3.32 0.00 0.00 3.18
751 756 0.034337 GACGGTGGCCTTAGTGTTCA 59.966 55.000 3.32 0.00 0.00 3.18
752 757 1.012486 CGACGGTGGCCTTAGTGTTC 61.012 60.000 3.32 0.00 0.00 3.18
753 758 1.005394 CGACGGTGGCCTTAGTGTT 60.005 57.895 3.32 0.00 0.00 3.32
754 759 2.654877 CGACGGTGGCCTTAGTGT 59.345 61.111 3.32 0.00 0.00 3.55
755 760 2.125673 CCGACGGTGGCCTTAGTG 60.126 66.667 5.48 0.00 0.00 2.74
767 772 3.685214 CTTCTCACCCTCGCCGACG 62.685 68.421 0.00 0.00 42.01 5.12
768 773 1.874345 TTCTTCTCACCCTCGCCGAC 61.874 60.000 0.00 0.00 0.00 4.79
769 774 1.595993 CTTCTTCTCACCCTCGCCGA 61.596 60.000 0.00 0.00 0.00 5.54
770 775 1.153745 CTTCTTCTCACCCTCGCCG 60.154 63.158 0.00 0.00 0.00 6.46
771 776 1.219393 CCTTCTTCTCACCCTCGCC 59.781 63.158 0.00 0.00 0.00 5.54
772 777 0.827368 ATCCTTCTTCTCACCCTCGC 59.173 55.000 0.00 0.00 0.00 5.03
773 778 3.491792 GCTTATCCTTCTTCTCACCCTCG 60.492 52.174 0.00 0.00 0.00 4.63
774 779 3.452627 TGCTTATCCTTCTTCTCACCCTC 59.547 47.826 0.00 0.00 0.00 4.30
775 780 3.454082 CTGCTTATCCTTCTTCTCACCCT 59.546 47.826 0.00 0.00 0.00 4.34
776 781 3.802866 CTGCTTATCCTTCTTCTCACCC 58.197 50.000 0.00 0.00 0.00 4.61
777 782 3.202097 GCTGCTTATCCTTCTTCTCACC 58.798 50.000 0.00 0.00 0.00 4.02
778 783 3.866651 TGCTGCTTATCCTTCTTCTCAC 58.133 45.455 0.00 0.00 0.00 3.51
779 784 4.256920 GTTGCTGCTTATCCTTCTTCTCA 58.743 43.478 0.00 0.00 0.00 3.27
780 785 4.256920 TGTTGCTGCTTATCCTTCTTCTC 58.743 43.478 0.00 0.00 0.00 2.87
781 786 4.019860 TCTGTTGCTGCTTATCCTTCTTCT 60.020 41.667 0.00 0.00 0.00 2.85
782 787 4.256920 TCTGTTGCTGCTTATCCTTCTTC 58.743 43.478 0.00 0.00 0.00 2.87
783 788 4.292186 TCTGTTGCTGCTTATCCTTCTT 57.708 40.909 0.00 0.00 0.00 2.52
784 789 3.988976 TCTGTTGCTGCTTATCCTTCT 57.011 42.857 0.00 0.00 0.00 2.85
785 790 5.573337 ATTTCTGTTGCTGCTTATCCTTC 57.427 39.130 0.00 0.00 0.00 3.46
786 791 6.830324 TCATATTTCTGTTGCTGCTTATCCTT 59.170 34.615 0.00 0.00 0.00 3.36
787 792 6.359804 TCATATTTCTGTTGCTGCTTATCCT 58.640 36.000 0.00 0.00 0.00 3.24
788 793 6.624352 TCATATTTCTGTTGCTGCTTATCC 57.376 37.500 0.00 0.00 0.00 2.59
789 794 6.581542 GCATCATATTTCTGTTGCTGCTTATC 59.418 38.462 0.00 0.00 38.33 1.75
790 795 6.040054 TGCATCATATTTCTGTTGCTGCTTAT 59.960 34.615 0.00 0.00 40.74 1.73
791 796 5.357596 TGCATCATATTTCTGTTGCTGCTTA 59.642 36.000 0.00 0.00 40.74 3.09
792 797 4.158949 TGCATCATATTTCTGTTGCTGCTT 59.841 37.500 0.00 0.00 40.74 3.91
793 798 3.697542 TGCATCATATTTCTGTTGCTGCT 59.302 39.130 0.00 0.00 40.74 4.24
794 799 4.036567 TGCATCATATTTCTGTTGCTGC 57.963 40.909 8.17 0.00 40.74 5.25
795 800 4.909880 CGATGCATCATATTTCTGTTGCTG 59.090 41.667 25.70 0.36 40.74 4.41
796 801 4.556104 GCGATGCATCATATTTCTGTTGCT 60.556 41.667 25.70 0.00 40.74 3.91
797 802 3.667261 GCGATGCATCATATTTCTGTTGC 59.333 43.478 25.70 12.43 40.59 4.17
798 803 5.104562 AGCGATGCATCATATTTCTGTTG 57.895 39.130 25.70 6.49 0.00 3.33
799 804 6.866010 TTAGCGATGCATCATATTTCTGTT 57.134 33.333 25.70 7.85 0.00 3.16
800 805 6.866010 TTTAGCGATGCATCATATTTCTGT 57.134 33.333 25.70 2.40 0.00 3.41
801 806 9.830294 TTATTTTAGCGATGCATCATATTTCTG 57.170 29.630 25.70 8.39 0.00 3.02
804 809 9.630098 CCTTTATTTTAGCGATGCATCATATTT 57.370 29.630 25.70 8.71 0.00 1.40
805 810 9.013229 TCCTTTATTTTAGCGATGCATCATATT 57.987 29.630 25.70 10.38 0.00 1.28
806 811 8.565896 TCCTTTATTTTAGCGATGCATCATAT 57.434 30.769 25.70 13.10 0.00 1.78
807 812 7.877612 TCTCCTTTATTTTAGCGATGCATCATA 59.122 33.333 25.70 14.87 0.00 2.15
808 813 6.712095 TCTCCTTTATTTTAGCGATGCATCAT 59.288 34.615 25.70 15.87 0.00 2.45
809 814 6.017934 GTCTCCTTTATTTTAGCGATGCATCA 60.018 38.462 25.70 6.06 0.00 3.07
810 815 6.366630 GTCTCCTTTATTTTAGCGATGCATC 58.633 40.000 17.10 17.10 0.00 3.91
811 816 5.050091 CGTCTCCTTTATTTTAGCGATGCAT 60.050 40.000 0.00 0.00 0.00 3.96
812 817 4.270084 CGTCTCCTTTATTTTAGCGATGCA 59.730 41.667 0.00 0.00 0.00 3.96
813 818 4.318831 CCGTCTCCTTTATTTTAGCGATGC 60.319 45.833 0.00 0.00 0.00 3.91
814 819 5.047847 TCCGTCTCCTTTATTTTAGCGATG 58.952 41.667 0.00 0.00 0.00 3.84
815 820 5.048507 GTCCGTCTCCTTTATTTTAGCGAT 58.951 41.667 0.00 0.00 0.00 4.58
816 821 4.427312 GTCCGTCTCCTTTATTTTAGCGA 58.573 43.478 0.00 0.00 0.00 4.93
817 822 3.554731 GGTCCGTCTCCTTTATTTTAGCG 59.445 47.826 0.00 0.00 0.00 4.26
818 823 4.767478 AGGTCCGTCTCCTTTATTTTAGC 58.233 43.478 0.00 0.00 30.18 3.09
819 824 7.985752 ACAATAGGTCCGTCTCCTTTATTTTAG 59.014 37.037 0.00 0.00 36.60 1.85
820 825 7.767198 CACAATAGGTCCGTCTCCTTTATTTTA 59.233 37.037 0.00 0.00 36.60 1.52
821 826 6.598064 CACAATAGGTCCGTCTCCTTTATTTT 59.402 38.462 0.00 0.00 36.60 1.82
822 827 6.113411 CACAATAGGTCCGTCTCCTTTATTT 58.887 40.000 0.00 0.00 36.60 1.40
823 828 5.396436 CCACAATAGGTCCGTCTCCTTTATT 60.396 44.000 0.00 0.00 36.60 1.40
824 829 4.101119 CCACAATAGGTCCGTCTCCTTTAT 59.899 45.833 0.00 0.00 36.60 1.40
825 830 3.449737 CCACAATAGGTCCGTCTCCTTTA 59.550 47.826 0.00 0.00 36.60 1.85
826 831 2.236395 CCACAATAGGTCCGTCTCCTTT 59.764 50.000 0.00 0.00 36.60 3.11
827 832 1.831736 CCACAATAGGTCCGTCTCCTT 59.168 52.381 0.00 0.00 36.60 3.36
828 833 1.273098 ACCACAATAGGTCCGTCTCCT 60.273 52.381 0.00 0.00 37.28 3.69
829 834 1.192428 ACCACAATAGGTCCGTCTCC 58.808 55.000 0.00 0.00 37.28 3.71
837 842 9.396022 CAACTATCATTTAAGACCACAATAGGT 57.604 33.333 0.00 0.00 46.82 3.08
838 843 9.396022 ACAACTATCATTTAAGACCACAATAGG 57.604 33.333 0.00 0.00 0.00 2.57
841 846 8.450964 CGAACAACTATCATTTAAGACCACAAT 58.549 33.333 0.00 0.00 0.00 2.71
842 847 7.094975 CCGAACAACTATCATTTAAGACCACAA 60.095 37.037 0.00 0.00 0.00 3.33
843 848 6.370442 CCGAACAACTATCATTTAAGACCACA 59.630 38.462 0.00 0.00 0.00 4.17
844 849 6.370718 ACCGAACAACTATCATTTAAGACCAC 59.629 38.462 0.00 0.00 0.00 4.16
845 850 6.469410 ACCGAACAACTATCATTTAAGACCA 58.531 36.000 0.00 0.00 0.00 4.02
846 851 6.980051 ACCGAACAACTATCATTTAAGACC 57.020 37.500 0.00 0.00 0.00 3.85
852 857 8.626526 ACACTTTTAACCGAACAACTATCATTT 58.373 29.630 0.00 0.00 0.00 2.32
853 858 8.073768 CACACTTTTAACCGAACAACTATCATT 58.926 33.333 0.00 0.00 0.00 2.57
854 859 7.227910 ACACACTTTTAACCGAACAACTATCAT 59.772 33.333 0.00 0.00 0.00 2.45
855 860 6.539464 ACACACTTTTAACCGAACAACTATCA 59.461 34.615 0.00 0.00 0.00 2.15
856 861 6.849305 CACACACTTTTAACCGAACAACTATC 59.151 38.462 0.00 0.00 0.00 2.08
857 862 6.316890 ACACACACTTTTAACCGAACAACTAT 59.683 34.615 0.00 0.00 0.00 2.12
858 863 5.642919 ACACACACTTTTAACCGAACAACTA 59.357 36.000 0.00 0.00 0.00 2.24
859 864 4.456566 ACACACACTTTTAACCGAACAACT 59.543 37.500 0.00 0.00 0.00 3.16
860 865 4.725359 ACACACACTTTTAACCGAACAAC 58.275 39.130 0.00 0.00 0.00 3.32
861 866 5.154932 CAACACACACTTTTAACCGAACAA 58.845 37.500 0.00 0.00 0.00 2.83
862 867 4.215827 ACAACACACACTTTTAACCGAACA 59.784 37.500 0.00 0.00 0.00 3.18
863 868 4.555747 CACAACACACACTTTTAACCGAAC 59.444 41.667 0.00 0.00 0.00 3.95
864 869 4.215827 ACACAACACACACTTTTAACCGAA 59.784 37.500 0.00 0.00 0.00 4.30
865 870 3.752222 ACACAACACACACTTTTAACCGA 59.248 39.130 0.00 0.00 0.00 4.69
866 871 4.086199 ACACAACACACACTTTTAACCG 57.914 40.909 0.00 0.00 0.00 4.44
867 872 6.772770 AAAACACAACACACACTTTTAACC 57.227 33.333 0.00 0.00 0.00 2.85
898 903 1.772063 AAGAGTCCGTGCGTTGCAAC 61.772 55.000 19.89 19.89 41.47 4.17
899 904 1.092921 AAAGAGTCCGTGCGTTGCAA 61.093 50.000 0.00 0.00 41.47 4.08
900 905 1.092921 AAAAGAGTCCGTGCGTTGCA 61.093 50.000 0.00 0.00 35.60 4.08
901 906 0.657368 CAAAAGAGTCCGTGCGTTGC 60.657 55.000 0.00 0.00 0.00 4.17
902 907 0.657368 GCAAAAGAGTCCGTGCGTTG 60.657 55.000 0.00 0.00 0.00 4.10
903 908 1.092921 TGCAAAAGAGTCCGTGCGTT 61.093 50.000 5.98 0.00 39.92 4.84
904 909 1.092921 TTGCAAAAGAGTCCGTGCGT 61.093 50.000 0.00 0.00 39.92 5.24
905 910 0.238289 ATTGCAAAAGAGTCCGTGCG 59.762 50.000 1.71 0.00 39.92 5.34
906 911 3.764885 ATATTGCAAAAGAGTCCGTGC 57.235 42.857 1.71 3.87 37.51 5.34
907 912 5.095490 GGAAATATTGCAAAAGAGTCCGTG 58.905 41.667 1.71 0.00 0.00 4.94
908 913 4.157840 GGGAAATATTGCAAAAGAGTCCGT 59.842 41.667 1.71 0.00 0.00 4.69
909 914 4.440112 GGGGAAATATTGCAAAAGAGTCCG 60.440 45.833 1.71 0.00 0.00 4.79
910 915 4.141937 GGGGGAAATATTGCAAAAGAGTCC 60.142 45.833 1.71 7.09 0.00 3.85
911 916 4.440112 CGGGGGAAATATTGCAAAAGAGTC 60.440 45.833 1.71 0.00 0.00 3.36
912 917 3.447229 CGGGGGAAATATTGCAAAAGAGT 59.553 43.478 1.71 0.00 0.00 3.24
913 918 3.447229 ACGGGGGAAATATTGCAAAAGAG 59.553 43.478 1.71 0.00 0.00 2.85
914 919 3.436243 ACGGGGGAAATATTGCAAAAGA 58.564 40.909 1.71 0.00 0.00 2.52
915 920 3.194542 TGACGGGGGAAATATTGCAAAAG 59.805 43.478 1.71 0.00 0.00 2.27
916 921 3.165875 TGACGGGGGAAATATTGCAAAA 58.834 40.909 1.71 0.00 0.00 2.44
917 922 2.757868 CTGACGGGGGAAATATTGCAAA 59.242 45.455 1.71 0.00 0.00 3.68
918 923 2.025793 TCTGACGGGGGAAATATTGCAA 60.026 45.455 0.00 0.00 0.00 4.08
919 924 1.562008 TCTGACGGGGGAAATATTGCA 59.438 47.619 0.00 0.00 0.00 4.08
920 925 1.947456 GTCTGACGGGGGAAATATTGC 59.053 52.381 0.00 0.00 0.00 3.56
921 926 3.560636 AGTCTGACGGGGGAAATATTG 57.439 47.619 1.52 0.00 0.00 1.90
922 927 4.021368 CGATAGTCTGACGGGGGAAATATT 60.021 45.833 1.52 0.00 0.00 1.28
923 928 3.510360 CGATAGTCTGACGGGGGAAATAT 59.490 47.826 1.52 0.00 0.00 1.28
924 929 2.889045 CGATAGTCTGACGGGGGAAATA 59.111 50.000 1.52 0.00 0.00 1.40
925 930 1.687123 CGATAGTCTGACGGGGGAAAT 59.313 52.381 1.52 0.00 0.00 2.17
926 931 1.108776 CGATAGTCTGACGGGGGAAA 58.891 55.000 1.52 0.00 0.00 3.13
927 932 2.803203 CGATAGTCTGACGGGGGAA 58.197 57.895 1.52 0.00 0.00 3.97
928 933 4.573210 CGATAGTCTGACGGGGGA 57.427 61.111 1.52 0.00 0.00 4.81
942 947 1.153429 GGGGCTTCGCTGTTACGAT 60.153 57.895 0.00 0.00 42.54 3.73
1051 1056 2.195922 GGTACCGTATACCGTTTGCTG 58.804 52.381 0.00 0.00 33.66 4.41
1062 1067 1.811860 GGTGACAGCGGTACCGTAT 59.188 57.895 33.34 20.76 42.09 3.06
1165 1197 5.030936 GCGCAAAGATGTTTCCTAATTCTC 58.969 41.667 0.30 0.00 0.00 2.87
1174 1206 3.735240 TGTGATTTGCGCAAAGATGTTTC 59.265 39.130 35.62 27.18 33.24 2.78
1188 1222 2.094894 GTCAGAGCATCGGTGTGATTTG 59.905 50.000 0.00 0.00 42.67 2.32
1193 1227 0.244721 TCTGTCAGAGCATCGGTGTG 59.755 55.000 0.00 0.00 42.67 3.82
1196 1230 0.814457 GTCTCTGTCAGAGCATCGGT 59.186 55.000 22.95 0.00 42.04 4.69
1205 1239 4.159321 TCAAGATTAGCCTGTCTCTGTCAG 59.841 45.833 0.00 0.00 0.00 3.51
1275 1309 2.301870 TCAGGAAAGCGTGTAGAACCAT 59.698 45.455 0.00 0.00 0.00 3.55
1340 1374 0.235926 GGAACTTGACTGAACTGCGC 59.764 55.000 0.00 0.00 0.00 6.09
1343 1377 1.261619 GCGTGGAACTTGACTGAACTG 59.738 52.381 0.00 0.00 31.75 3.16
1470 1504 4.155826 TGCCACATTAGTGCATAACAAGAC 59.844 41.667 0.00 0.00 44.53 3.01
1641 1726 2.803956 ACGTACCTCTGGTTCATCTGA 58.196 47.619 0.00 0.00 37.09 3.27
1692 1778 4.878397 CACAGGTCCAAATATGAGAGGAAC 59.122 45.833 0.00 0.00 38.14 3.62
1710 1796 2.119801 AGCTTAGCACAATCCACAGG 57.880 50.000 7.07 0.00 0.00 4.00
1711 1797 4.025396 CGAATAGCTTAGCACAATCCACAG 60.025 45.833 7.07 0.00 0.00 3.66
1713 1799 4.119862 TCGAATAGCTTAGCACAATCCAC 58.880 43.478 7.07 0.00 0.00 4.02
1718 1804 6.371548 AGTCAAATTCGAATAGCTTAGCACAA 59.628 34.615 11.83 0.00 0.00 3.33
1771 1857 3.780294 TCCTTTATCACCAGGTGCAGTAT 59.220 43.478 15.64 5.73 32.98 2.12
1891 1980 2.762535 TTTCGCTAACTTCAGAGGGG 57.237 50.000 0.00 0.00 0.00 4.79
2119 2255 2.896243 CTTGTTGAGCTGACTGATGC 57.104 50.000 0.00 0.00 0.00 3.91
2245 2381 9.744468 AAACGGCCAAATGAAAAATATATAGAC 57.256 29.630 2.24 0.00 0.00 2.59
2249 2385 9.877178 TGTAAAACGGCCAAATGAAAAATATAT 57.123 25.926 2.24 0.00 0.00 0.86
2253 2389 6.927294 TTGTAAAACGGCCAAATGAAAAAT 57.073 29.167 2.24 0.00 0.00 1.82
2334 2478 3.677424 GCAAGTACTTCCGAGAGATGCTT 60.677 47.826 4.77 0.00 0.00 3.91
2381 2526 2.618709 CTGTCAAGTCCCAAACTCCAAC 59.381 50.000 0.00 0.00 37.17 3.77
2408 2553 7.497925 ACTGGACATTAGTCTTTTTCTTGTC 57.502 36.000 0.00 0.00 44.36 3.18
2409 2554 7.556275 TGAACTGGACATTAGTCTTTTTCTTGT 59.444 33.333 0.00 0.00 44.36 3.16
2410 2555 7.930217 TGAACTGGACATTAGTCTTTTTCTTG 58.070 34.615 0.00 0.00 44.36 3.02
2436 2582 4.814234 CAGCTACGTCCTGCCAAATTATAA 59.186 41.667 0.00 0.00 0.00 0.98
2539 2685 0.456221 TCTCTCTCGAATCAACGCCC 59.544 55.000 0.00 0.00 0.00 6.13
2543 2689 1.402259 TCGCCTCTCTCTCGAATCAAC 59.598 52.381 0.00 0.00 0.00 3.18
2580 2726 7.442364 TCAGTTATAATTAAGGATCTGCAGCAC 59.558 37.037 9.47 5.09 0.00 4.40
2606 2752 4.461781 CCTCTCTGGAATCTTGCAAATTGT 59.538 41.667 0.00 0.00 38.35 2.71
2609 2755 3.011032 ACCCTCTCTGGAATCTTGCAAAT 59.989 43.478 0.00 0.00 38.35 2.32
2641 2789 0.725117 CCGACATCTTAAACCACCGC 59.275 55.000 0.00 0.00 0.00 5.68
2672 2820 2.031333 CCAAGTGAGTTCAAAGCTCTGC 60.031 50.000 0.00 0.00 34.30 4.26
2685 2833 5.455392 CAAAATTGTACAGAGCCAAGTGAG 58.545 41.667 0.00 0.00 0.00 3.51
2716 2864 6.206243 ACAACTCTGATGCCATAATATCAAGC 59.794 38.462 0.00 0.00 33.30 4.01
2792 3117 7.500559 GGACTCCTCCGTAGTAAAATTAGTAGA 59.499 40.741 0.00 0.00 0.00 2.59
2796 3121 6.461110 TGGACTCCTCCGTAGTAAAATTAG 57.539 41.667 0.00 0.00 39.88 1.73
2817 3146 5.789643 TGAGTTTTCTCCCTCAATTTTGG 57.210 39.130 0.00 0.00 45.63 3.28
2818 3147 6.809869 AGTTGAGTTTTCTCCCTCAATTTTG 58.190 36.000 5.49 0.00 46.20 2.44
2844 3173 9.630098 CAAGATGCTGTTGTTGTAAATATTTCT 57.370 29.630 3.39 0.00 0.00 2.52
2856 3189 4.401022 TCAGGAATCAAGATGCTGTTGTT 58.599 39.130 0.00 0.00 37.49 2.83
2861 3194 1.948145 GGCTCAGGAATCAAGATGCTG 59.052 52.381 0.00 0.00 37.56 4.41
2869 3202 1.833630 CAGTGGTAGGCTCAGGAATCA 59.166 52.381 0.00 0.00 0.00 2.57
2870 3203 2.111384 TCAGTGGTAGGCTCAGGAATC 58.889 52.381 0.00 0.00 0.00 2.52
2871 3204 1.834263 GTCAGTGGTAGGCTCAGGAAT 59.166 52.381 0.00 0.00 0.00 3.01
2872 3205 1.267121 GTCAGTGGTAGGCTCAGGAA 58.733 55.000 0.00 0.00 0.00 3.36
2874 3207 0.976641 TTGTCAGTGGTAGGCTCAGG 59.023 55.000 0.00 0.00 0.00 3.86
2875 3208 2.693069 CTTTGTCAGTGGTAGGCTCAG 58.307 52.381 0.00 0.00 0.00 3.35
2876 3209 1.270839 GCTTTGTCAGTGGTAGGCTCA 60.271 52.381 0.00 0.00 0.00 4.26
2894 3234 3.699894 CGTCAGCTCACCCCTGCT 61.700 66.667 0.00 0.00 40.54 4.24
2900 3240 2.005960 ATAGTCCGCGTCAGCTCACC 62.006 60.000 4.92 0.00 42.32 4.02
2908 3248 1.852895 GAATCACACATAGTCCGCGTC 59.147 52.381 4.92 0.00 0.00 5.19
2920 3260 0.037326 TCGCCTGACTGGAATCACAC 60.037 55.000 1.91 0.00 38.35 3.82
2922 3262 2.029838 AATCGCCTGACTGGAATCAC 57.970 50.000 1.91 0.00 38.35 3.06
2938 3278 9.042008 CCTATGTTGTATACACAGGTTGTAATC 57.958 37.037 4.68 0.00 44.86 1.75
2954 3294 5.516044 TCAGCTCCTCTTACCTATGTTGTA 58.484 41.667 0.00 0.00 0.00 2.41
2955 3295 4.353777 TCAGCTCCTCTTACCTATGTTGT 58.646 43.478 0.00 0.00 0.00 3.32
2956 3296 5.069648 TCATCAGCTCCTCTTACCTATGTTG 59.930 44.000 0.00 0.00 0.00 3.33
2961 3301 4.873010 AGTTCATCAGCTCCTCTTACCTA 58.127 43.478 0.00 0.00 0.00 3.08
2965 3305 4.202060 CGCTTAGTTCATCAGCTCCTCTTA 60.202 45.833 0.00 0.00 0.00 2.10
3150 3494 1.456287 GACAAGGAGGCAAGGTGGT 59.544 57.895 0.00 0.00 0.00 4.16
3166 3510 3.519930 GGCGACGAGGAGGAGGAC 61.520 72.222 0.00 0.00 0.00 3.85
3185 3529 2.359967 GGGACCAAGAGGGAGACGG 61.360 68.421 0.00 0.00 41.15 4.79
3249 3593 1.957177 ACGTAGATCGAGATGGTGCAT 59.043 47.619 0.00 0.00 42.86 3.96
3266 3610 1.710013 CAAATAGACTCCACGCACGT 58.290 50.000 0.00 0.00 0.00 4.49
3267 3611 0.370273 GCAAATAGACTCCACGCACG 59.630 55.000 0.00 0.00 0.00 5.34
3271 3615 1.929836 GCTCAGCAAATAGACTCCACG 59.070 52.381 0.00 0.00 0.00 4.94
3371 3715 1.007964 CCAAAAACGGATGCACGCA 60.008 52.632 0.00 0.00 37.37 5.24
3382 3758 2.237066 GCACACAGCGGCCAAAAAC 61.237 57.895 2.24 0.00 0.00 2.43
3393 3769 1.990799 CCAAGATGCAATGCACACAG 58.009 50.000 11.23 1.02 43.04 3.66
3394 3770 0.038067 GCCAAGATGCAATGCACACA 60.038 50.000 11.23 0.00 43.04 3.72
3395 3771 0.738412 GGCCAAGATGCAATGCACAC 60.738 55.000 11.23 8.16 43.04 3.82
3396 3772 1.186267 TGGCCAAGATGCAATGCACA 61.186 50.000 11.23 0.00 43.04 4.57
3397 3773 0.459585 CTGGCCAAGATGCAATGCAC 60.460 55.000 11.23 4.80 43.04 4.57
3398 3774 0.612453 TCTGGCCAAGATGCAATGCA 60.612 50.000 11.44 11.44 44.86 3.96
3399 3775 0.179119 GTCTGGCCAAGATGCAATGC 60.179 55.000 7.01 0.00 37.23 3.56
3400 3776 1.135199 GTGTCTGGCCAAGATGCAATG 60.135 52.381 7.01 0.00 37.23 2.82
3401 3777 1.180029 GTGTCTGGCCAAGATGCAAT 58.820 50.000 7.01 0.00 37.23 3.56
3402 3778 1.236616 CGTGTCTGGCCAAGATGCAA 61.237 55.000 7.01 0.00 37.23 4.08
3403 3779 1.672030 CGTGTCTGGCCAAGATGCA 60.672 57.895 7.01 0.00 37.23 3.96
3404 3780 1.672356 ACGTGTCTGGCCAAGATGC 60.672 57.895 7.01 3.35 37.23 3.91
3405 3781 0.320683 TCACGTGTCTGGCCAAGATG 60.321 55.000 16.51 4.86 37.23 2.90
3406 3782 0.320771 GTCACGTGTCTGGCCAAGAT 60.321 55.000 16.51 0.00 37.23 2.40
3407 3783 1.069090 GTCACGTGTCTGGCCAAGA 59.931 57.895 16.51 3.54 0.00 3.02
3408 3784 0.603707 ATGTCACGTGTCTGGCCAAG 60.604 55.000 16.51 0.66 0.00 3.61
3409 3785 0.884259 CATGTCACGTGTCTGGCCAA 60.884 55.000 16.51 0.00 0.00 4.52
3410 3786 1.301637 CATGTCACGTGTCTGGCCA 60.302 57.895 16.51 4.71 0.00 5.36
3411 3787 0.037697 TACATGTCACGTGTCTGGCC 60.038 55.000 16.51 0.00 0.00 5.36
3412 3788 1.459592 GTTACATGTCACGTGTCTGGC 59.540 52.381 16.51 2.98 0.00 4.85
3413 3789 2.475111 GTGTTACATGTCACGTGTCTGG 59.525 50.000 16.51 8.86 0.00 3.86
3414 3790 3.381045 AGTGTTACATGTCACGTGTCTG 58.619 45.455 16.51 13.38 39.25 3.51
3415 3791 3.552273 GGAGTGTTACATGTCACGTGTCT 60.552 47.826 16.51 0.00 39.25 3.41
3416 3792 2.729882 GGAGTGTTACATGTCACGTGTC 59.270 50.000 16.51 10.98 39.25 3.67
3417 3793 2.547218 GGGAGTGTTACATGTCACGTGT 60.547 50.000 16.51 8.00 39.25 4.49
3418 3794 2.066262 GGGAGTGTTACATGTCACGTG 58.934 52.381 9.94 9.94 39.25 4.49
3419 3795 1.689813 TGGGAGTGTTACATGTCACGT 59.310 47.619 0.00 0.00 39.25 4.49
3435 3819 3.616219 CAATTTACGGGAATCACTGGGA 58.384 45.455 0.00 0.00 0.00 4.37
3451 3835 8.689972 CCATGAAGATAAGCTTAAGACCAATTT 58.310 33.333 10.85 0.00 36.83 1.82
3452 3836 8.055181 TCCATGAAGATAAGCTTAAGACCAATT 58.945 33.333 10.85 0.00 36.83 2.32
3481 3865 2.401766 GGCCGGCTGTTCACTCATG 61.402 63.158 28.56 0.00 0.00 3.07
3482 3866 2.045926 GGCCGGCTGTTCACTCAT 60.046 61.111 28.56 0.00 0.00 2.90
3484 3868 1.600916 AAAGGCCGGCTGTTCACTC 60.601 57.895 28.56 6.68 0.00 3.51
3485 3869 1.898574 CAAAGGCCGGCTGTTCACT 60.899 57.895 28.56 11.02 0.00 3.41
3486 3870 1.856265 CTCAAAGGCCGGCTGTTCAC 61.856 60.000 28.56 8.41 0.00 3.18
3487 3871 1.600636 CTCAAAGGCCGGCTGTTCA 60.601 57.895 28.56 6.19 0.00 3.18
3488 3872 1.600916 ACTCAAAGGCCGGCTGTTC 60.601 57.895 28.56 9.72 0.00 3.18
3489 3873 1.898574 CACTCAAAGGCCGGCTGTT 60.899 57.895 28.56 17.60 0.00 3.16
3490 3874 2.281761 CACTCAAAGGCCGGCTGT 60.282 61.111 28.56 11.71 0.00 4.40
3491 3875 3.741476 GCACTCAAAGGCCGGCTG 61.741 66.667 28.56 17.63 0.00 4.85
3492 3876 3.790416 TTGCACTCAAAGGCCGGCT 62.790 57.895 28.56 9.77 0.00 5.52
3493 3877 3.273080 CTTGCACTCAAAGGCCGGC 62.273 63.158 21.18 21.18 0.00 6.13
3494 3878 1.455383 AACTTGCACTCAAAGGCCGG 61.455 55.000 0.00 0.00 0.00 6.13
3495 3879 0.318107 CAACTTGCACTCAAAGGCCG 60.318 55.000 0.00 0.00 0.00 6.13
3496 3880 0.746659 ACAACTTGCACTCAAAGGCC 59.253 50.000 0.00 0.00 0.00 5.19
3497 3881 1.597937 CGACAACTTGCACTCAAAGGC 60.598 52.381 0.00 0.00 0.00 4.35
3498 3882 1.002468 CCGACAACTTGCACTCAAAGG 60.002 52.381 0.00 0.00 0.00 3.11
3499 3883 1.002468 CCCGACAACTTGCACTCAAAG 60.002 52.381 0.00 0.00 0.00 2.77
3500 3884 1.021202 CCCGACAACTTGCACTCAAA 58.979 50.000 0.00 0.00 0.00 2.69
3501 3885 0.179234 TCCCGACAACTTGCACTCAA 59.821 50.000 0.00 0.00 0.00 3.02
3511 3895 1.201647 TCTGATCGAGTTCCCGACAAC 59.798 52.381 0.00 0.00 41.70 3.32
3515 3899 1.202417 GCATTCTGATCGAGTTCCCGA 60.202 52.381 0.00 0.00 43.16 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.