Multiple sequence alignment - TraesCS7A01G311700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G311700 chr7A 100.000 9729 0 0 1 9729 442262428 442272156 0.000000e+00 17967.0
1 TraesCS7A01G311700 chr7A 85.994 357 42 7 6 358 215327844 215327492 9.220000e-100 375.0
2 TraesCS7A01G311700 chr7B 95.050 2485 95 12 4545 7022 387154144 387156607 0.000000e+00 3882.0
3 TraesCS7A01G311700 chr7B 97.064 1635 41 6 1698 3330 387151374 387153003 0.000000e+00 2747.0
4 TraesCS7A01G311700 chr7B 94.379 1441 51 11 8295 9729 387159281 387160697 0.000000e+00 2185.0
5 TraesCS7A01G311700 chr7B 96.312 1166 37 4 7051 8211 387157921 387159085 0.000000e+00 1910.0
6 TraesCS7A01G311700 chr7B 91.040 904 38 23 801 1693 387149919 387150790 0.000000e+00 1181.0
7 TraesCS7A01G311700 chr7B 93.739 591 24 7 3969 4558 387153528 387154106 0.000000e+00 874.0
8 TraesCS7A01G311700 chr7B 95.474 464 19 2 3457 3918 387153060 387153523 0.000000e+00 739.0
9 TraesCS7A01G311700 chr7B 85.235 447 54 8 6047 6485 304122995 304123437 5.360000e-122 449.0
10 TraesCS7A01G311700 chr7B 96.454 141 4 1 3323 3463 295083298 295083159 2.110000e-56 231.0
11 TraesCS7A01G311700 chr7B 96.078 51 1 1 8248 8297 387159205 387159255 2.250000e-11 82.4
12 TraesCS7A01G311700 chr7D 93.964 2601 82 32 7131 9677 390687505 390690084 0.000000e+00 3864.0
13 TraesCS7A01G311700 chr7D 96.770 2260 50 12 1074 3330 390680000 390682239 0.000000e+00 3747.0
14 TraesCS7A01G311700 chr7D 94.796 2056 71 11 4545 6588 390683366 390685397 0.000000e+00 3171.0
15 TraesCS7A01G311700 chr7D 95.845 1107 33 7 3453 4558 390682234 390683328 0.000000e+00 1777.0
16 TraesCS7A01G311700 chr7D 83.969 892 79 17 91 960 390678395 390679244 0.000000e+00 797.0
17 TraesCS7A01G311700 chr7D 86.916 535 60 6 6489 7021 184230833 184230307 8.410000e-165 592.0
18 TraesCS7A01G311700 chr7D 97.590 83 2 0 7051 7133 390687265 390687347 1.020000e-29 143.0
19 TraesCS7A01G311700 chr1A 89.834 541 48 5 6482 7022 77281506 77280973 0.000000e+00 688.0
20 TraesCS7A01G311700 chr4A 87.778 540 61 4 6482 7021 590229617 590229083 2.310000e-175 627.0
21 TraesCS7A01G311700 chr4A 83.297 461 40 13 6049 6488 503216753 503217197 3.290000e-104 390.0
22 TraesCS7A01G311700 chr1D 87.361 538 61 2 6482 7019 205118358 205118888 2.320000e-170 610.0
23 TraesCS7A01G311700 chr1D 85.399 363 41 10 6 364 204909871 204909517 5.550000e-97 366.0
24 TraesCS7A01G311700 chr1D 97.080 137 4 0 3321 3457 469018551 469018687 2.110000e-56 231.0
25 TraesCS7A01G311700 chr2D 87.736 530 51 11 6493 7021 331608487 331609003 3.010000e-169 606.0
26 TraesCS7A01G311700 chr2D 86.852 540 64 3 6482 7021 136978321 136977789 1.810000e-166 597.0
27 TraesCS7A01G311700 chr2D 88.939 443 38 6 6056 6488 410410235 410410676 4.000000e-148 536.0
28 TraesCS7A01G311700 chr2D 86.724 467 35 10 6047 6488 388833660 388834124 2.440000e-135 494.0
29 TraesCS7A01G311700 chr2D 84.368 467 47 10 6047 6488 360483602 360484067 1.500000e-117 435.0
30 TraesCS7A01G311700 chr3B 86.852 540 63 4 6482 7021 79950530 79951061 1.810000e-166 597.0
31 TraesCS7A01G311700 chr3B 86.517 356 39 8 4 356 396776059 396776408 5.510000e-102 383.0
32 TraesCS7A01G311700 chr4D 86.481 540 66 3 6482 7021 320107068 320106536 3.910000e-163 586.0
33 TraesCS7A01G311700 chr4D 89.803 304 25 4 6047 6346 409444349 409444650 1.530000e-102 385.0
34 TraesCS7A01G311700 chr2A 89.140 442 39 4 6056 6488 578388486 578388927 8.590000e-150 542.0
35 TraesCS7A01G311700 chr2B 88.462 442 42 5 6056 6488 484931817 484932258 8.660000e-145 525.0
36 TraesCS7A01G311700 chr2B 86.501 363 39 8 3 362 102121001 102120646 3.290000e-104 390.0
37 TraesCS7A01G311700 chr3D 87.351 419 33 8 6047 6451 46481722 46481310 6.880000e-126 462.0
38 TraesCS7A01G311700 chr3D 85.831 367 40 12 1 362 488225820 488226179 7.130000e-101 379.0
39 TraesCS7A01G311700 chr3D 97.842 139 2 1 3320 3457 496172891 496172753 1.260000e-58 239.0
40 TraesCS7A01G311700 chr3D 97.794 136 3 0 3326 3461 606951436 606951301 1.630000e-57 235.0
41 TraesCS7A01G311700 chr6B 88.333 360 37 5 1 356 530840021 530840379 2.510000e-115 427.0
42 TraesCS7A01G311700 chr6B 93.590 156 6 4 3324 3476 67527385 67527539 7.600000e-56 230.0
43 TraesCS7A01G311700 chr1B 85.873 361 42 8 6 362 464287389 464287034 9.220000e-100 375.0
44 TraesCS7A01G311700 chr1B 97.826 138 2 1 3321 3457 623732119 623731982 4.540000e-58 237.0
45 TraesCS7A01G311700 chr6D 85.326 368 40 13 4 364 237567994 237568354 1.540000e-97 368.0
46 TraesCS7A01G311700 chr6D 97.710 131 3 0 3324 3454 435990507 435990637 9.830000e-55 226.0
47 TraesCS7A01G311700 chr3A 85.286 367 43 11 1 362 438825775 438826135 1.540000e-97 368.0
48 TraesCS7A01G311700 chr6A 100.000 129 0 0 3328 3456 32749188 32749060 1.260000e-58 239.0
49 TraesCS7A01G311700 chr6A 98.507 134 2 0 3326 3459 121886219 121886352 4.540000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G311700 chr7A 442262428 442272156 9728 False 17967.000000 17967 100.000000 1 9729 1 chr7A.!!$F1 9728
1 TraesCS7A01G311700 chr7B 387149919 387160697 10778 False 1700.050000 3882 94.892000 801 9729 8 chr7B.!!$F2 8928
2 TraesCS7A01G311700 chr7D 390678395 390690084 11689 False 2249.833333 3864 93.822333 91 9677 6 chr7D.!!$F1 9586
3 TraesCS7A01G311700 chr7D 184230307 184230833 526 True 592.000000 592 86.916000 6489 7021 1 chr7D.!!$R1 532
4 TraesCS7A01G311700 chr1A 77280973 77281506 533 True 688.000000 688 89.834000 6482 7022 1 chr1A.!!$R1 540
5 TraesCS7A01G311700 chr4A 590229083 590229617 534 True 627.000000 627 87.778000 6482 7021 1 chr4A.!!$R1 539
6 TraesCS7A01G311700 chr1D 205118358 205118888 530 False 610.000000 610 87.361000 6482 7019 1 chr1D.!!$F1 537
7 TraesCS7A01G311700 chr2D 331608487 331609003 516 False 606.000000 606 87.736000 6493 7021 1 chr2D.!!$F1 528
8 TraesCS7A01G311700 chr2D 136977789 136978321 532 True 597.000000 597 86.852000 6482 7021 1 chr2D.!!$R1 539
9 TraesCS7A01G311700 chr3B 79950530 79951061 531 False 597.000000 597 86.852000 6482 7021 1 chr3B.!!$F1 539
10 TraesCS7A01G311700 chr4D 320106536 320107068 532 True 586.000000 586 86.481000 6482 7021 1 chr4D.!!$R1 539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 243 0.110373 CGCCGAGGTAAAGTGTTTGC 60.110 55.0 0.00 0.0 0.00 3.68 F
962 991 0.178861 TGCTCCCTTCCTTCCTTCCT 60.179 55.0 0.00 0.0 0.00 3.36 F
1320 1992 0.733566 TCGTATTCGACAACGGCACC 60.734 55.0 16.20 0.0 41.35 5.01 F
1563 2239 1.305219 ATGAATCACCACCAACGGCG 61.305 55.0 4.80 4.8 0.00 6.46 F
3344 4600 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.00 0.0 0.00 3.28 F
3455 4711 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.0 0.00 0.0 0.00 2.73 F
3457 4713 0.257039 TGGGACGGAGGGAGTACTAC 59.743 60.0 0.00 0.0 0.00 2.73 F
4662 6029 0.898320 CCTCGGAGCTTCTCTTCCAA 59.102 55.0 0.00 0.0 0.00 3.53 F
6169 7537 0.899720 CTAACTTCCACACGCCCCTA 59.100 55.0 0.00 0.0 0.00 3.53 F
6423 7802 0.254178 GTGGCCACACATCCATCTCT 59.746 55.0 31.23 0.0 46.90 3.10 F
6846 8226 0.331278 TGGTTGACATCCCACATCCC 59.669 55.0 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 2249 0.598680 CAATTAGGGAGCGAGCCTCG 60.599 60.000 10.36 10.36 41.71 4.63 R
1798 3052 2.488153 GGCAGCGTGGATTTAAAGACTT 59.512 45.455 0.00 0.00 0.00 3.01 R
3221 4476 0.526954 GCGCTCATTGCAGAATTGGG 60.527 55.000 0.00 0.00 43.06 4.12 R
3436 4692 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28 R
4261 5577 0.474660 ATATGGGGGAGACTGGAGCC 60.475 60.000 0.00 0.00 0.00 4.70 R
5396 6764 0.963962 ATTGGTTCCAAGCAGCACAG 59.036 50.000 10.10 0.00 37.74 3.66 R
5401 6769 2.886523 TCAAGACATTGGTTCCAAGCAG 59.113 45.455 10.10 5.44 37.74 4.24 R
6423 7802 0.318699 GTAGCGGAGATGCGCATGTA 60.319 55.000 30.76 5.02 40.67 2.29 R
8091 11121 0.618968 AACCCCCAAACCAAACTGCA 60.619 50.000 0.00 0.00 0.00 4.41 R
8326 11496 0.239347 GTGTGGCAGCACTGAATGAC 59.761 55.000 0.81 0.00 36.51 3.06 R
8749 11921 0.725117 CCGGATCCGTAGCACAAAAC 59.275 55.000 31.22 0.00 37.81 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.256228 TCCAGAACATTACTATGAGTAGAAAGT 57.744 33.333 0.00 0.00 35.65 2.66
27 28 9.877178 CCAGAACATTACTATGAGTAGAAAGTT 57.123 33.333 0.00 0.00 35.65 2.66
53 54 9.865321 TTTTGAGTAGATGTAATAAAGCTACGT 57.135 29.630 0.73 0.00 37.20 3.57
64 65 9.634163 TGTAATAAAGCTACGTATGATATGGTG 57.366 33.333 0.00 0.00 0.00 4.17
65 66 9.850628 GTAATAAAGCTACGTATGATATGGTGA 57.149 33.333 0.00 0.00 0.00 4.02
66 67 8.988064 AATAAAGCTACGTATGATATGGTGAG 57.012 34.615 0.00 0.00 0.00 3.51
67 68 6.650427 AAAGCTACGTATGATATGGTGAGA 57.350 37.500 0.00 0.00 0.00 3.27
68 69 6.842437 AAGCTACGTATGATATGGTGAGAT 57.158 37.500 0.00 0.00 0.00 2.75
69 70 6.443934 AGCTACGTATGATATGGTGAGATC 57.556 41.667 0.00 0.00 0.00 2.75
70 71 5.946377 AGCTACGTATGATATGGTGAGATCA 59.054 40.000 0.00 0.00 34.35 2.92
71 72 6.434340 AGCTACGTATGATATGGTGAGATCAA 59.566 38.462 0.00 0.00 33.57 2.57
72 73 7.039714 AGCTACGTATGATATGGTGAGATCAAA 60.040 37.037 0.00 0.00 33.57 2.69
73 74 7.274468 GCTACGTATGATATGGTGAGATCAAAG 59.726 40.741 0.00 0.00 33.57 2.77
74 75 7.290110 ACGTATGATATGGTGAGATCAAAGA 57.710 36.000 0.00 0.00 33.57 2.52
75 76 7.901029 ACGTATGATATGGTGAGATCAAAGAT 58.099 34.615 0.00 0.00 33.57 2.40
76 77 9.025041 ACGTATGATATGGTGAGATCAAAGATA 57.975 33.333 0.00 0.00 33.57 1.98
77 78 9.860898 CGTATGATATGGTGAGATCAAAGATAA 57.139 33.333 0.00 0.00 33.57 1.75
84 85 8.991783 ATGGTGAGATCAAAGATAACATTGAT 57.008 30.769 3.45 3.45 43.83 2.57
85 86 8.812513 TGGTGAGATCAAAGATAACATTGATT 57.187 30.769 5.14 0.00 42.10 2.57
86 87 9.904198 TGGTGAGATCAAAGATAACATTGATTA 57.096 29.630 5.14 0.00 42.10 1.75
128 129 9.120538 TCTTAATGTGTTGCTTTAGAGACTTTT 57.879 29.630 0.00 0.00 0.00 2.27
130 131 6.699575 ATGTGTTGCTTTAGAGACTTTTGT 57.300 33.333 0.00 0.00 0.00 2.83
177 178 7.116233 ACCATCGAATTTGTTGAAATAAAGTGC 59.884 33.333 5.46 0.00 31.18 4.40
180 181 8.722342 TCGAATTTGTTGAAATAAAGTGCTAC 57.278 30.769 0.00 0.00 31.18 3.58
200 201 7.771826 GTGCTACTTTGTAGGTTATCCCAAATA 59.228 37.037 6.83 0.00 34.66 1.40
225 226 4.952460 TGGGTATTCCTTTATCACTACGC 58.048 43.478 0.00 0.00 36.20 4.42
241 242 1.223187 ACGCCGAGGTAAAGTGTTTG 58.777 50.000 0.00 0.00 0.00 2.93
242 243 0.110373 CGCCGAGGTAAAGTGTTTGC 60.110 55.000 0.00 0.00 0.00 3.68
253 254 1.661197 GTGTTTGCCCACATGTGCG 60.661 57.895 20.81 13.46 35.38 5.34
294 296 1.490490 TCTGCAAAAGAGTGAGTGGGT 59.510 47.619 0.00 0.00 0.00 4.51
321 323 1.532437 TGCAACTCGACAAGATTGCAG 59.468 47.619 6.41 0.00 42.56 4.41
349 351 7.031226 CTTTGTCATCAGGTCAAAGAAAAGA 57.969 36.000 3.31 0.00 45.96 2.52
350 352 7.403312 TTTGTCATCAGGTCAAAGAAAAGAA 57.597 32.000 0.00 0.00 0.00 2.52
351 353 7.403312 TTGTCATCAGGTCAAAGAAAAGAAA 57.597 32.000 0.00 0.00 0.00 2.52
352 354 6.795399 TGTCATCAGGTCAAAGAAAAGAAAC 58.205 36.000 0.00 0.00 0.00 2.78
353 355 6.376864 TGTCATCAGGTCAAAGAAAAGAAACA 59.623 34.615 0.00 0.00 0.00 2.83
354 356 6.693113 GTCATCAGGTCAAAGAAAAGAAACAC 59.307 38.462 0.00 0.00 0.00 3.32
355 357 6.603201 TCATCAGGTCAAAGAAAAGAAACACT 59.397 34.615 0.00 0.00 0.00 3.55
356 358 6.194796 TCAGGTCAAAGAAAAGAAACACTG 57.805 37.500 0.00 0.00 0.00 3.66
357 359 5.125417 TCAGGTCAAAGAAAAGAAACACTGG 59.875 40.000 0.00 0.00 0.00 4.00
358 360 4.112634 GGTCAAAGAAAAGAAACACTGGC 58.887 43.478 0.00 0.00 0.00 4.85
359 361 4.381505 GGTCAAAGAAAAGAAACACTGGCA 60.382 41.667 0.00 0.00 0.00 4.92
360 362 4.800471 GTCAAAGAAAAGAAACACTGGCAG 59.200 41.667 14.16 14.16 0.00 4.85
361 363 4.462483 TCAAAGAAAAGAAACACTGGCAGT 59.538 37.500 15.88 15.88 0.00 4.40
369 371 2.765969 CACTGGCAGTGGGGGATT 59.234 61.111 34.59 1.64 42.35 3.01
375 377 0.831711 GGCAGTGGGGGATTTTGTGT 60.832 55.000 0.00 0.00 0.00 3.72
385 387 2.159382 GGATTTTGTGTCGGTGATGGT 58.841 47.619 0.00 0.00 0.00 3.55
387 389 1.313772 TTTTGTGTCGGTGATGGTGG 58.686 50.000 0.00 0.00 0.00 4.61
388 390 1.169661 TTTGTGTCGGTGATGGTGGC 61.170 55.000 0.00 0.00 0.00 5.01
407 409 2.879233 GCTGTGGGGTTGAGACGGA 61.879 63.158 0.00 0.00 0.00 4.69
409 411 1.754380 CTGTGGGGTTGAGACGGACA 61.754 60.000 0.00 0.00 0.00 4.02
414 416 1.219522 GGGTTGAGACGGACAACACG 61.220 60.000 17.99 0.00 46.16 4.49
486 488 6.636454 TTTAATTAAAGAGGGGCAGAGAGA 57.364 37.500 6.54 0.00 0.00 3.10
502 504 4.871557 CAGAGAGAAGAGAAAGAAGGCATG 59.128 45.833 0.00 0.00 0.00 4.06
505 507 6.212388 AGAGAGAAGAGAAAGAAGGCATGTTA 59.788 38.462 0.00 0.00 0.00 2.41
515 517 4.037927 AGAAGGCATGTTAGGCTAGGTTA 58.962 43.478 0.00 0.00 44.47 2.85
518 520 2.704065 GGCATGTTAGGCTAGGTTAGGA 59.296 50.000 0.00 0.00 0.00 2.94
521 523 5.012768 GGCATGTTAGGCTAGGTTAGGAATA 59.987 44.000 0.00 0.00 0.00 1.75
527 529 8.774183 TGTTAGGCTAGGTTAGGAATAATTTGA 58.226 33.333 0.00 0.00 0.00 2.69
539 541 6.275335 AGGAATAATTTGATGTGATTTGGCG 58.725 36.000 0.00 0.00 0.00 5.69
546 548 2.027653 TGATGTGATTTGGCGTAGGTCA 60.028 45.455 0.00 0.00 0.00 4.02
551 553 2.766263 TGATTTGGCGTAGGTCAGATCT 59.234 45.455 17.96 0.00 39.44 2.75
553 555 3.795623 TTTGGCGTAGGTCAGATCTAC 57.204 47.619 10.53 10.53 35.13 2.59
591 593 4.103103 CGTCGAGGCGTGCTCTGA 62.103 66.667 0.00 0.00 0.00 3.27
595 597 2.183046 GAGGCGTGCTCTGACCTC 59.817 66.667 0.00 0.00 41.81 3.85
598 600 2.659610 GCGTGCTCTGACCTCCTT 59.340 61.111 0.00 0.00 0.00 3.36
605 607 3.997681 GTGCTCTGACCTCCTTAGTTTTC 59.002 47.826 0.00 0.00 0.00 2.29
617 619 4.464951 TCCTTAGTTTTCGCCTCAGATACA 59.535 41.667 0.00 0.00 0.00 2.29
624 626 0.461548 CGCCTCAGATACAAGCTGGA 59.538 55.000 0.00 0.00 34.20 3.86
641 643 4.125703 GCTGGATTTGAGAGATGACGAAT 58.874 43.478 0.00 0.00 0.00 3.34
643 645 5.404968 GCTGGATTTGAGAGATGACGAATAG 59.595 44.000 0.00 0.00 0.00 1.73
645 647 7.582667 TGGATTTGAGAGATGACGAATAGTA 57.417 36.000 0.00 0.00 0.00 1.82
668 670 8.307483 AGTATGGACATATAAGATCGGTTTGAG 58.693 37.037 0.00 0.00 0.00 3.02
670 672 5.221641 TGGACATATAAGATCGGTTTGAGGG 60.222 44.000 0.00 0.00 0.00 4.30
672 674 4.658901 ACATATAAGATCGGTTTGAGGGGT 59.341 41.667 0.00 0.00 0.00 4.95
673 675 3.840124 ATAAGATCGGTTTGAGGGGTC 57.160 47.619 0.00 0.00 0.00 4.46
677 679 4.404098 CGGTTTGAGGGGTCGGGG 62.404 72.222 0.00 0.00 0.00 5.73
683 685 4.393778 GAGGGGTCGGGGAGGTCA 62.394 72.222 0.00 0.00 0.00 4.02
684 686 4.716977 AGGGGTCGGGGAGGTCAC 62.717 72.222 0.00 0.00 0.00 3.67
707 721 2.587322 TTCACCACCGATCATCCGCC 62.587 60.000 0.00 0.00 0.00 6.13
708 722 3.861797 ACCACCGATCATCCGCCC 61.862 66.667 0.00 0.00 0.00 6.13
716 730 1.403382 CGATCATCCGCCCATACAGAG 60.403 57.143 0.00 0.00 0.00 3.35
719 733 1.043816 CATCCGCCCATACAGAGAGT 58.956 55.000 0.00 0.00 0.00 3.24
725 739 2.287909 CGCCCATACAGAGAGTAGAAGC 60.288 54.545 0.00 0.00 35.85 3.86
728 742 4.500716 GCCCATACAGAGAGTAGAAGCTTC 60.501 50.000 19.11 19.11 35.85 3.86
741 755 3.795342 GCTTCGGGCGCGCTTTTA 61.795 61.111 32.29 13.34 0.00 1.52
743 757 1.427819 CTTCGGGCGCGCTTTTATT 59.572 52.632 32.29 0.00 0.00 1.40
744 758 0.861450 CTTCGGGCGCGCTTTTATTG 60.861 55.000 32.29 12.64 0.00 1.90
745 759 1.579084 TTCGGGCGCGCTTTTATTGT 61.579 50.000 32.29 0.00 0.00 2.71
746 760 1.867373 CGGGCGCGCTTTTATTGTG 60.867 57.895 32.29 6.35 0.00 3.33
747 761 2.158330 GGGCGCGCTTTTATTGTGC 61.158 57.895 32.29 9.74 38.36 4.57
749 763 1.154035 GCGCGCTTTTATTGTGCCT 60.154 52.632 26.67 0.00 37.62 4.75
759 773 5.466393 GCTTTTATTGTGCCTGTTGATGTTT 59.534 36.000 0.00 0.00 0.00 2.83
801 824 6.294508 CCTTTGTCTCCAAATTTACGGTGATT 60.295 38.462 0.00 0.00 39.72 2.57
805 828 6.370442 TGTCTCCAAATTTACGGTGATTGTAG 59.630 38.462 0.00 0.00 0.00 2.74
810 833 6.404184 CCAAATTTACGGTGATTGTAGATGCA 60.404 38.462 0.00 0.00 0.00 3.96
817 840 4.319046 CGGTGATTGTAGATGCAGTAATGC 60.319 45.833 8.51 8.51 0.00 3.56
916 945 0.452987 CATTTCCGACCATGCCACAG 59.547 55.000 0.00 0.00 0.00 3.66
917 946 1.315257 ATTTCCGACCATGCCACAGC 61.315 55.000 0.00 0.00 40.48 4.40
962 991 0.178861 TGCTCCCTTCCTTCCTTCCT 60.179 55.000 0.00 0.00 0.00 3.36
963 992 0.995803 GCTCCCTTCCTTCCTTCCTT 59.004 55.000 0.00 0.00 0.00 3.36
964 993 1.065053 GCTCCCTTCCTTCCTTCCTTC 60.065 57.143 0.00 0.00 0.00 3.46
965 994 1.562008 CTCCCTTCCTTCCTTCCTTCC 59.438 57.143 0.00 0.00 0.00 3.46
984 1013 1.301401 CGCTTCCCTCGTCAACCAA 60.301 57.895 0.00 0.00 0.00 3.67
986 1015 1.534729 GCTTCCCTCGTCAACCAAAT 58.465 50.000 0.00 0.00 0.00 2.32
988 1017 2.778299 CTTCCCTCGTCAACCAAATCA 58.222 47.619 0.00 0.00 0.00 2.57
989 1018 2.940994 TCCCTCGTCAACCAAATCAA 57.059 45.000 0.00 0.00 0.00 2.57
990 1019 2.500229 TCCCTCGTCAACCAAATCAAC 58.500 47.619 0.00 0.00 0.00 3.18
991 1020 1.539827 CCCTCGTCAACCAAATCAACC 59.460 52.381 0.00 0.00 0.00 3.77
992 1021 2.226330 CCTCGTCAACCAAATCAACCA 58.774 47.619 0.00 0.00 0.00 3.67
993 1022 2.621055 CCTCGTCAACCAAATCAACCAA 59.379 45.455 0.00 0.00 0.00 3.67
1211 1883 1.599047 CTCGTCCACCCATGCTTCT 59.401 57.895 0.00 0.00 0.00 2.85
1320 1992 0.733566 TCGTATTCGACAACGGCACC 60.734 55.000 16.20 0.00 41.35 5.01
1328 2000 2.740826 CAACGGCACCGGGTACAG 60.741 66.667 14.51 0.00 44.69 2.74
1534 2210 4.037446 GGGAATAATGCATTTCGTTAGCCA 59.963 41.667 18.75 0.00 31.40 4.75
1535 2211 5.451242 GGGAATAATGCATTTCGTTAGCCAA 60.451 40.000 18.75 0.00 31.40 4.52
1563 2239 1.305219 ATGAATCACCACCAACGGCG 61.305 55.000 4.80 4.80 0.00 6.46
1564 2240 1.964373 GAATCACCACCAACGGCGT 60.964 57.895 6.77 6.77 0.00 5.68
1569 2245 2.668212 CCACCAACGGCGTGTCAT 60.668 61.111 15.70 0.00 0.00 3.06
1580 2257 3.558411 GTGTCATGCGCGAGGCTC 61.558 66.667 12.10 3.87 44.05 4.70
1598 2275 4.540153 GCTCCCTAATTGCGAGCA 57.460 55.556 14.74 0.00 46.63 4.26
1642 2319 3.762288 AGCGTTCTAGAGTATGGTGAACA 59.238 43.478 0.00 0.00 37.46 3.18
1712 2966 5.221661 ACCACAGTGAACTTAAGGTAGGAAG 60.222 44.000 7.53 0.00 0.00 3.46
1713 2967 5.011738 CCACAGTGAACTTAAGGTAGGAAGA 59.988 44.000 7.53 0.00 0.00 2.87
1714 2968 6.463897 CCACAGTGAACTTAAGGTAGGAAGAA 60.464 42.308 7.53 0.00 0.00 2.52
1780 3034 3.568007 TCATTGGTTGAACTAGGTGTTGC 59.432 43.478 0.00 0.00 39.30 4.17
1798 3052 6.127479 GGTGTTGCTCCATTCATTATTGGTTA 60.127 38.462 0.00 0.00 34.48 2.85
1872 3126 3.872511 TGGAGCTACGAACGGAAAATA 57.127 42.857 0.00 0.00 0.00 1.40
1942 3196 7.672983 TCTAGTCCTTTAGCTCAAATTGTTG 57.327 36.000 0.00 0.00 35.95 3.33
2062 3316 4.973168 TGCGATAGAAGGCAGGAAATAAT 58.027 39.130 0.00 0.00 33.52 1.28
2096 3350 5.747565 CACAAGCGTTTTATCTTGAAGTCA 58.252 37.500 8.72 0.00 41.50 3.41
2531 3785 4.526970 TGTCATATCTTTTTCCCTGCTCC 58.473 43.478 0.00 0.00 0.00 4.70
2855 4109 7.742767 TGATCAAGTATCAAGATGGTCATCAT 58.257 34.615 12.75 0.00 41.75 2.45
3134 4389 4.955811 TTCCGTACTCATAAGCATGGAT 57.044 40.909 0.00 0.00 34.52 3.41
3221 4476 5.293079 GTGATGACTGCTTATTTCTCACTCC 59.707 44.000 0.00 0.00 31.42 3.85
3334 4590 9.710818 TTGTTCTAGACATAAATAGTACTCCCT 57.289 33.333 0.00 0.00 38.26 4.20
3335 4591 9.352191 TGTTCTAGACATAAATAGTACTCCCTC 57.648 37.037 0.00 0.00 32.00 4.30
3336 4592 8.795513 GTTCTAGACATAAATAGTACTCCCTCC 58.204 40.741 0.00 0.00 0.00 4.30
3337 4593 7.166851 TCTAGACATAAATAGTACTCCCTCCG 58.833 42.308 0.00 0.00 0.00 4.63
3338 4594 5.703310 AGACATAAATAGTACTCCCTCCGT 58.297 41.667 0.00 0.00 0.00 4.69
3339 4595 5.769162 AGACATAAATAGTACTCCCTCCGTC 59.231 44.000 0.00 1.48 0.00 4.79
3340 4596 4.831710 ACATAAATAGTACTCCCTCCGTCC 59.168 45.833 0.00 0.00 0.00 4.79
3341 4597 2.378378 AATAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
3342 4598 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
3343 4599 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
3344 4600 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3345 4601 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3346 4602 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3347 4603 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3348 4604 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3349 4605 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3350 4606 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3351 4607 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3352 4608 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3353 4609 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3354 4610 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3355 4611 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3356 4612 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3357 4613 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
3358 4614 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
3359 4615 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
3360 4616 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
3361 4617 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
3362 4618 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
3363 4619 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
3364 4620 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
3365 4621 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
3373 4629 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
3374 4630 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
3376 4632 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
3377 4633 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
3384 4640 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
3385 4641 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
3386 4642 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
3387 4643 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
3388 4644 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
3389 4645 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
3390 4646 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
3391 4647 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
3392 4648 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
3393 4649 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
3394 4650 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
3395 4651 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
3396 4652 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
3397 4653 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
3398 4654 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
3408 4664 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
3409 4665 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
3410 4666 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
3411 4667 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
3429 4685 9.530633 ACATCCGTATCTAGACAAATTTAAGAC 57.469 33.333 0.00 0.00 0.00 3.01
3430 4686 9.529325 CATCCGTATCTAGACAAATTTAAGACA 57.471 33.333 0.00 0.00 0.00 3.41
3432 4688 9.582431 TCCGTATCTAGACAAATTTAAGACAAG 57.418 33.333 0.00 0.00 0.00 3.16
3433 4689 9.582431 CCGTATCTAGACAAATTTAAGACAAGA 57.418 33.333 0.00 0.00 0.00 3.02
3441 4697 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
3442 4698 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
3443 4699 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
3444 4700 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
3445 4701 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
3446 4702 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3447 4703 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3448 4704 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3449 4705 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3450 4706 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3451 4707 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
3452 4708 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
3453 4709 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3454 4710 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
3455 4711 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
3456 4712 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
3457 4713 0.257039 TGGGACGGAGGGAGTACTAC 59.743 60.000 0.00 0.00 0.00 2.73
3499 4813 8.763356 CATTGATGAAGTAGACTCATCTAAAGC 58.237 37.037 12.60 0.00 39.20 3.51
3502 4817 6.798427 TGAAGTAGACTCATCTAAAGCCAT 57.202 37.500 0.00 0.00 39.20 4.40
3505 4820 7.342026 TGAAGTAGACTCATCTAAAGCCATGTA 59.658 37.037 0.00 0.00 39.20 2.29
3619 4934 2.819019 TCCACATATTGTGCCAGTTGTG 59.181 45.455 2.09 0.00 46.51 3.33
3733 5048 8.816640 TTAATTTTCTTCTCACATTTTCCTGC 57.183 30.769 0.00 0.00 0.00 4.85
3743 5058 3.919804 CACATTTTCCTGCGGTTATGTTG 59.080 43.478 0.00 0.00 0.00 3.33
3925 5241 5.275067 TCCAGGAAAAAGGAAATGTGTTG 57.725 39.130 0.00 0.00 0.00 3.33
3965 5281 7.494625 ACCATCATGTATTTGTTAGGTACTTCG 59.505 37.037 0.00 0.00 41.75 3.79
3978 5294 9.048446 TGTTAGGTACTTCGGCAAATATTTATC 57.952 33.333 0.00 0.00 41.75 1.75
4057 5373 1.819288 TCGGTCAACAAAGCCAAAACA 59.181 42.857 0.00 0.00 0.00 2.83
4111 5427 6.087456 TGGATATCTATTCTGAAGCCTCCTT 58.913 40.000 2.05 0.00 0.00 3.36
4258 5574 6.002653 CTTTTGTAAGGATACCTAAGGGCT 57.997 41.667 0.00 0.00 35.63 5.19
4259 5575 7.133133 CTTTTGTAAGGATACCTAAGGGCTA 57.867 40.000 0.00 0.00 35.63 3.93
4260 5576 7.513560 TTTTGTAAGGATACCTAAGGGCTAA 57.486 36.000 0.00 0.00 35.63 3.09
4261 5577 6.742559 TTGTAAGGATACCTAAGGGCTAAG 57.257 41.667 0.00 0.00 35.63 2.18
4262 5578 5.152934 TGTAAGGATACCTAAGGGCTAAGG 58.847 45.833 0.00 0.00 38.93 2.69
4263 5579 2.622210 AGGATACCTAAGGGCTAAGGC 58.378 52.381 0.00 0.00 36.24 4.35
4337 5653 7.775120 AGTTGATTTTGTGAACATGTTCTCTT 58.225 30.769 32.57 18.08 40.14 2.85
4398 5715 4.486125 AGAAAACAAAACCTGCACCATT 57.514 36.364 0.00 0.00 0.00 3.16
4422 5739 4.984161 GCATTCACAAGTGTTGCTGTTATT 59.016 37.500 17.34 0.00 37.60 1.40
4425 5742 3.951037 TCACAAGTGTTGCTGTTATTGGT 59.049 39.130 0.00 0.00 0.00 3.67
4453 5770 2.799978 TCGTATGTGCAGCGGAATTATG 59.200 45.455 0.00 0.00 0.00 1.90
4511 5828 7.007456 GCATAAAACTAGAACGAGTTGAAATGC 59.993 37.037 16.98 16.98 39.62 3.56
4647 6014 4.766404 ACAAAAGTTCCAATAAGCCTCG 57.234 40.909 0.00 0.00 0.00 4.63
4662 6029 0.898320 CCTCGGAGCTTCTCTTCCAA 59.102 55.000 0.00 0.00 0.00 3.53
4865 6232 1.747355 CTGGAATGTTGTCATCTGGGC 59.253 52.381 0.00 0.00 32.56 5.36
4885 6252 4.237724 GGCAAGAAACTCCATTTTACTGC 58.762 43.478 0.00 0.00 32.64 4.40
4910 6277 2.009051 CTAGTGCGACATCATTTGCCA 58.991 47.619 0.00 0.00 0.00 4.92
5063 6431 5.577945 CCTACATTGACAACATGAAATTGGC 59.422 40.000 0.00 0.00 35.48 4.52
5237 6605 4.202182 ACATGGCTGCTTTTATGCTTATGG 60.202 41.667 0.00 0.00 0.00 2.74
5396 6764 4.894784 TCCTTCAGACATTGTCAAGGTAC 58.105 43.478 24.41 0.00 35.93 3.34
5401 6769 3.187227 CAGACATTGTCAAGGTACTGTGC 59.813 47.826 18.57 0.00 40.86 4.57
5472 6840 4.877823 TCCAATGATCTACACAAGCACATC 59.122 41.667 0.00 0.00 0.00 3.06
5605 6973 3.056393 ACATGCTGCATATGTTTGCTTGT 60.056 39.130 15.78 20.73 43.18 3.16
5620 6988 4.140518 TGCTTGTGTTGTTGTAATAGCG 57.859 40.909 0.00 0.00 0.00 4.26
5644 7012 6.755607 CGACTAATACCTACCTTTTGGACTTC 59.244 42.308 0.00 0.00 44.07 3.01
5825 7193 1.909302 AGACTGGGGTTCCATACACAG 59.091 52.381 0.00 0.00 43.11 3.66
5896 7264 6.036735 ACACCGTATTCTACCATTCAATTTCG 59.963 38.462 0.00 0.00 0.00 3.46
5939 7307 4.538089 GGGCCTATTCATTATTCTCCCTCT 59.462 45.833 0.84 0.00 0.00 3.69
5960 7328 8.143835 CCCTCTGTTTCAAAATAGATGTTGTTT 58.856 33.333 2.91 0.00 35.92 2.83
6000 7368 4.686091 TCTCAGAATGCTTGTCAGTTTACG 59.314 41.667 0.00 0.00 34.76 3.18
6004 7372 4.574828 AGAATGCTTGTCAGTTTACGTTGT 59.425 37.500 0.00 0.00 0.00 3.32
6088 7456 3.798889 GCCTTTAGTCCCAAACAAGTTGC 60.799 47.826 1.81 0.00 35.74 4.17
6117 7485 5.071115 GGCTAGAGTTGACCCATAAGATCTT 59.929 44.000 13.56 13.56 0.00 2.40
6169 7537 0.899720 CTAACTTCCACACGCCCCTA 59.100 55.000 0.00 0.00 0.00 3.53
6208 7576 3.118261 TGGTGATATTCCAGTCCTTCAGC 60.118 47.826 0.00 0.00 33.47 4.26
6230 7598 3.611970 TCTCTCTTTACGGACTCCTCTG 58.388 50.000 0.00 0.00 0.00 3.35
6252 7620 4.288366 TGATGTCAAGTTTGATCTACCCCA 59.712 41.667 0.00 0.00 39.73 4.96
6276 7644 4.223700 ACCTCTCTTGACATTATCAGCACA 59.776 41.667 0.00 0.00 38.99 4.57
6314 7687 1.131771 CACTGCGCTGTATATGTCCG 58.868 55.000 20.04 1.17 0.00 4.79
6330 7703 1.519455 CCGAACCATCTCAGCCGAC 60.519 63.158 0.00 0.00 0.00 4.79
6353 7726 4.377841 CGTTGGACAAGCTTCTCTTCAATC 60.378 45.833 0.00 0.00 31.27 2.67
6372 7745 1.541310 CGGTGCTACCCCAACTCTCA 61.541 60.000 0.00 0.00 33.75 3.27
6423 7802 0.254178 GTGGCCACACATCCATCTCT 59.746 55.000 31.23 0.00 46.90 3.10
6673 8053 1.798223 TCTTGGATTCGTCGCACAAAG 59.202 47.619 0.00 0.00 0.00 2.77
6703 8083 4.916870 TGGTATCATCAAAGTAGTCGTCG 58.083 43.478 0.00 0.00 0.00 5.12
6713 8093 4.959596 AAGTAGTCGTCGAGCTCAATAA 57.040 40.909 15.40 0.00 0.00 1.40
6769 8149 0.614979 AGTACTCCCGCCATCTGTGT 60.615 55.000 0.00 0.00 0.00 3.72
6840 8220 3.304911 TTTGACTTGGTTGACATCCCA 57.695 42.857 0.00 0.00 0.00 4.37
6841 8221 2.270352 TGACTTGGTTGACATCCCAC 57.730 50.000 0.00 0.00 0.00 4.61
6842 8222 1.492599 TGACTTGGTTGACATCCCACA 59.507 47.619 0.00 0.00 0.00 4.17
6843 8223 2.108075 TGACTTGGTTGACATCCCACAT 59.892 45.455 0.00 0.00 0.00 3.21
6844 8224 2.749621 GACTTGGTTGACATCCCACATC 59.250 50.000 0.00 0.00 0.00 3.06
6845 8225 2.094675 CTTGGTTGACATCCCACATCC 58.905 52.381 0.00 0.00 0.00 3.51
6846 8226 0.331278 TGGTTGACATCCCACATCCC 59.669 55.000 0.00 0.00 0.00 3.85
6857 8241 1.849039 CCCACATCCCTCATCTTCCTT 59.151 52.381 0.00 0.00 0.00 3.36
6898 8282 3.933861 ATAGATGTCCCTTTCGCCTTT 57.066 42.857 0.00 0.00 0.00 3.11
6903 8287 1.142060 TGTCCCTTTCGCCTTTCTTCA 59.858 47.619 0.00 0.00 0.00 3.02
6904 8288 2.224769 TGTCCCTTTCGCCTTTCTTCAT 60.225 45.455 0.00 0.00 0.00 2.57
6907 8291 2.162408 CCCTTTCGCCTTTCTTCATGTC 59.838 50.000 0.00 0.00 0.00 3.06
6961 8348 3.260884 CCCCTTACTTTACTCACAGCTCA 59.739 47.826 0.00 0.00 0.00 4.26
7013 8400 7.155328 ACTTTTCTATGTTGTCTACACTCCTG 58.845 38.462 0.00 0.00 40.19 3.86
7027 8414 3.252284 CCTGTCCAGGTGGCAGGT 61.252 66.667 21.98 0.00 45.81 4.00
7028 8415 2.033141 CTGTCCAGGTGGCAGGTG 59.967 66.667 10.80 0.00 36.42 4.00
7038 8425 0.830648 GTGGCAGGTGTAGGCATCTA 59.169 55.000 0.00 0.00 43.71 1.98
7049 8436 6.212791 AGGTGTAGGCATCTAAAACAGTCTTA 59.787 38.462 0.00 0.00 33.58 2.10
7289 10316 2.847327 CTGACAGACAGGTTGACCAT 57.153 50.000 0.00 0.00 42.39 3.55
7354 10383 6.442112 ACGTAAATAATAAGTAGCTCGGGAC 58.558 40.000 0.00 0.00 0.00 4.46
7361 10390 3.596310 AAGTAGCTCGGGACTTTTCTC 57.404 47.619 0.00 0.00 31.83 2.87
7427 10456 4.123506 CGAGAAGCTCTAAAGGAAATCCC 58.876 47.826 0.00 0.00 36.42 3.85
7487 10516 7.745015 TCTGTAGGTTGTTACGCATTTTTATC 58.255 34.615 0.00 0.00 0.00 1.75
7723 10752 3.004002 TCTTTGAGCTCTGCAAACACATG 59.996 43.478 16.19 0.00 32.35 3.21
7882 10911 1.602191 GTGTTGCCGAAACTAATGCG 58.398 50.000 3.18 0.00 39.70 4.73
7884 10913 1.125847 GTTGCCGAAACTAATGCGCG 61.126 55.000 0.00 0.00 35.75 6.86
7937 10966 1.703438 GCTTGACTGAGCTCATGCCG 61.703 60.000 18.63 8.09 39.57 5.69
7953 10982 4.094294 TCATGCCGTAACTAGTTGAATTGC 59.906 41.667 18.56 12.95 0.00 3.56
7955 10984 2.745281 GCCGTAACTAGTTGAATTGCCA 59.255 45.455 18.56 0.00 0.00 4.92
8091 11121 5.020132 GTCACCCATCCTATACAGAGCTAT 58.980 45.833 0.00 0.00 0.00 2.97
8103 11133 3.490348 ACAGAGCTATGCAGTTTGGTTT 58.510 40.909 8.60 0.00 0.00 3.27
8616 11787 4.793451 CCTGTTCCAGGTGCATGTTTGC 62.793 54.545 1.99 0.00 45.82 3.68
8639 11810 2.102757 TGTAGCCAGTTGTGGTCGTAAA 59.897 45.455 0.00 0.00 46.96 2.01
8707 11879 4.290969 GGTTGCTGAAAGAGTTTTGCTAC 58.709 43.478 0.00 0.00 34.07 3.58
8744 11916 5.291371 GTCTAACGCTATCTTGTTTCCCTTC 59.709 44.000 0.00 0.00 0.00 3.46
8749 11921 4.806247 CGCTATCTTGTTTCCCTTCTACTG 59.194 45.833 0.00 0.00 0.00 2.74
8777 11949 2.234300 TACGGATCCGGAGAAAATGC 57.766 50.000 35.87 0.00 44.69 3.56
8778 11950 0.810031 ACGGATCCGGAGAAAATGCG 60.810 55.000 35.87 12.59 44.69 4.73
8786 11958 1.028868 GGAGAAAATGCGAGGCTGCT 61.029 55.000 0.00 0.00 35.36 4.24
8787 11959 1.656652 GAGAAAATGCGAGGCTGCTA 58.343 50.000 0.00 0.00 35.36 3.49
8819 11991 1.402107 TATCTGCTCCTGCCGCATCA 61.402 55.000 0.00 0.00 36.70 3.07
8849 12021 0.393448 GGGGGCTTTTTGGCGTTTTA 59.607 50.000 0.00 0.00 42.84 1.52
8867 12039 5.635280 CGTTTTAGAACATGAAGAGAGCAGA 59.365 40.000 0.00 0.00 35.44 4.26
8870 12042 7.606858 TTTAGAACATGAAGAGAGCAGATTG 57.393 36.000 0.00 0.00 0.00 2.67
8876 12048 6.222389 ACATGAAGAGAGCAGATTGTATAGC 58.778 40.000 0.00 0.00 0.00 2.97
8910 12086 7.377766 TGTCCATAATTTTTAGTGTGAGCTC 57.622 36.000 6.82 6.82 0.00 4.09
8956 12142 4.226168 CCTTTGGAGGGTTCTAGTCTTGAT 59.774 45.833 0.00 0.00 39.55 2.57
9030 12216 3.714391 AGGAACAAGTAACGAGTGACAC 58.286 45.455 0.00 0.00 0.00 3.67
9062 12248 5.460646 TCGAGTAACGAGTTTATTTTCGGT 58.539 37.500 0.00 0.00 46.45 4.69
9070 12256 6.788243 ACGAGTTTATTTTCGGTTTGAGTTT 58.212 32.000 0.00 0.00 40.93 2.66
9187 12373 1.798735 CAGTCTTTGCCATGCCTCG 59.201 57.895 0.00 0.00 0.00 4.63
9208 12394 2.293399 GGAAATTAATTGGCGCGGATCT 59.707 45.455 8.83 0.00 0.00 2.75
9255 12441 1.255667 TACCGGCTGTTGGTCCTCTC 61.256 60.000 0.00 0.00 40.96 3.20
9256 12442 2.286523 CCGGCTGTTGGTCCTCTCT 61.287 63.158 0.00 0.00 0.00 3.10
9257 12443 1.674057 CGGCTGTTGGTCCTCTCTT 59.326 57.895 0.00 0.00 0.00 2.85
9258 12444 0.035458 CGGCTGTTGGTCCTCTCTTT 59.965 55.000 0.00 0.00 0.00 2.52
9259 12445 1.814793 GGCTGTTGGTCCTCTCTTTC 58.185 55.000 0.00 0.00 0.00 2.62
9260 12446 1.349357 GGCTGTTGGTCCTCTCTTTCT 59.651 52.381 0.00 0.00 0.00 2.52
9419 12612 3.500448 TCCAATAACTGACCTGCACAA 57.500 42.857 0.00 0.00 0.00 3.33
9465 12658 1.674764 CCAAGCCACAGCAACCACAA 61.675 55.000 0.00 0.00 43.56 3.33
9484 12677 3.380004 ACAAAGACGCCAGAAAAACATCA 59.620 39.130 0.00 0.00 0.00 3.07
9572 12766 5.173673 TCGTTCAAACTTACACACGATGTAC 59.826 40.000 4.17 0.00 43.71 2.90
9672 12866 7.168469 GGACTCTAAAAGACTCGCAGATAAATC 59.832 40.741 0.00 0.00 33.89 2.17
9686 12880 3.136626 AGATAAATCGGTTCTGGGAAGGG 59.863 47.826 0.00 0.00 0.00 3.95
9687 12881 0.331616 AAATCGGTTCTGGGAAGGGG 59.668 55.000 0.00 0.00 0.00 4.79
9688 12882 0.845102 AATCGGTTCTGGGAAGGGGT 60.845 55.000 0.00 0.00 0.00 4.95
9689 12883 0.845102 ATCGGTTCTGGGAAGGGGTT 60.845 55.000 0.00 0.00 0.00 4.11
9699 12893 1.281287 GGGAAGGGGTTTCAGACTACC 59.719 57.143 0.00 0.00 37.54 3.18
9719 12913 1.208293 CCAAGGTGAGGTAGCTTCTCC 59.792 57.143 12.38 5.78 44.89 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.877178 AACTTTCTACTCATAGTAATGTTCTGG 57.123 33.333 0.00 0.00 34.50 3.86
27 28 9.865321 ACGTAGCTTTATTACATCTACTCAAAA 57.135 29.630 0.00 0.00 0.00 2.44
38 39 9.634163 CACCATATCATACGTAGCTTTATTACA 57.366 33.333 0.08 0.00 0.00 2.41
39 40 9.850628 TCACCATATCATACGTAGCTTTATTAC 57.149 33.333 0.08 0.00 0.00 1.89
41 42 8.803235 TCTCACCATATCATACGTAGCTTTATT 58.197 33.333 0.08 0.00 0.00 1.40
42 43 8.349568 TCTCACCATATCATACGTAGCTTTAT 57.650 34.615 0.08 0.00 0.00 1.40
43 44 7.754851 TCTCACCATATCATACGTAGCTTTA 57.245 36.000 0.08 0.00 0.00 1.85
44 45 6.650427 TCTCACCATATCATACGTAGCTTT 57.350 37.500 0.08 0.00 0.00 3.51
45 46 6.434340 TGATCTCACCATATCATACGTAGCTT 59.566 38.462 0.08 0.00 0.00 3.74
46 47 5.946377 TGATCTCACCATATCATACGTAGCT 59.054 40.000 0.08 0.00 0.00 3.32
47 48 6.196079 TGATCTCACCATATCATACGTAGC 57.804 41.667 0.08 0.00 0.00 3.58
48 49 8.515414 TCTTTGATCTCACCATATCATACGTAG 58.485 37.037 0.08 0.00 32.40 3.51
49 50 8.404107 TCTTTGATCTCACCATATCATACGTA 57.596 34.615 0.00 0.00 32.40 3.57
50 51 7.290110 TCTTTGATCTCACCATATCATACGT 57.710 36.000 0.00 0.00 32.40 3.57
51 52 9.860898 TTATCTTTGATCTCACCATATCATACG 57.139 33.333 0.00 0.00 32.40 3.06
59 60 8.991783 ATCAATGTTATCTTTGATCTCACCAT 57.008 30.769 8.41 0.00 41.43 3.55
60 61 8.812513 AATCAATGTTATCTTTGATCTCACCA 57.187 30.769 12.72 0.00 43.11 4.17
86 87 9.871238 ACACATTAAGAAGTATACTGACGAAAT 57.129 29.630 6.06 6.73 0.00 2.17
87 88 9.701098 AACACATTAAGAAGTATACTGACGAAA 57.299 29.630 6.06 4.92 0.00 3.46
88 89 9.135843 CAACACATTAAGAAGTATACTGACGAA 57.864 33.333 6.06 5.03 0.00 3.85
89 90 7.274904 GCAACACATTAAGAAGTATACTGACGA 59.725 37.037 6.06 0.00 0.00 4.20
90 91 7.275779 AGCAACACATTAAGAAGTATACTGACG 59.724 37.037 6.06 0.00 0.00 4.35
91 92 8.480643 AGCAACACATTAAGAAGTATACTGAC 57.519 34.615 6.06 4.28 0.00 3.51
92 93 9.502091 AAAGCAACACATTAAGAAGTATACTGA 57.498 29.630 6.06 0.00 0.00 3.41
103 104 9.173939 CAAAAGTCTCTAAAGCAACACATTAAG 57.826 33.333 0.00 0.00 0.00 1.85
152 153 7.329226 AGCACTTTATTTCAACAAATTCGATGG 59.671 33.333 0.00 0.00 33.95 3.51
163 164 8.565416 ACCTACAAAGTAGCACTTTATTTCAAC 58.435 33.333 12.06 0.00 45.84 3.18
200 201 6.485648 GCGTAGTGATAAAGGAATACCCAATT 59.514 38.462 0.00 0.00 37.41 2.32
223 224 0.110373 GCAAACACTTTACCTCGGCG 60.110 55.000 0.00 0.00 0.00 6.46
225 226 0.879090 GGGCAAACACTTTACCTCGG 59.121 55.000 0.00 0.00 0.00 4.63
241 242 0.037419 AAATTTCCGCACATGTGGGC 60.037 50.000 31.53 16.57 45.45 5.36
242 243 1.271934 TCAAATTTCCGCACATGTGGG 59.728 47.619 30.37 30.37 45.45 4.61
294 296 0.176910 TTGTCGAGTTGCACTGTCCA 59.823 50.000 0.00 0.00 0.00 4.02
318 320 4.005650 TGACCTGATGACAAAGATTCTGC 58.994 43.478 0.00 0.00 0.00 4.26
345 347 1.402787 CCCACTGCCAGTGTTTCTTT 58.597 50.000 22.54 0.00 44.50 2.52
346 348 0.468029 CCCCACTGCCAGTGTTTCTT 60.468 55.000 22.54 0.00 44.50 2.52
347 349 1.151450 CCCCACTGCCAGTGTTTCT 59.849 57.895 22.54 0.00 44.50 2.52
348 350 1.903404 CCCCCACTGCCAGTGTTTC 60.903 63.158 22.54 0.00 44.50 2.78
349 351 1.729267 ATCCCCCACTGCCAGTGTTT 61.729 55.000 22.54 0.82 44.50 2.83
350 352 1.729267 AATCCCCCACTGCCAGTGTT 61.729 55.000 22.54 7.86 44.50 3.32
351 353 1.729267 AAATCCCCCACTGCCAGTGT 61.729 55.000 22.54 1.48 44.50 3.55
352 354 0.542702 AAAATCCCCCACTGCCAGTG 60.543 55.000 18.02 18.02 45.53 3.66
353 355 0.542702 CAAAATCCCCCACTGCCAGT 60.543 55.000 0.00 0.00 0.00 4.00
354 356 0.542702 ACAAAATCCCCCACTGCCAG 60.543 55.000 0.00 0.00 0.00 4.85
355 357 0.831288 CACAAAATCCCCCACTGCCA 60.831 55.000 0.00 0.00 0.00 4.92
356 358 0.831711 ACACAAAATCCCCCACTGCC 60.832 55.000 0.00 0.00 0.00 4.85
357 359 0.603065 GACACAAAATCCCCCACTGC 59.397 55.000 0.00 0.00 0.00 4.40
358 360 0.881118 CGACACAAAATCCCCCACTG 59.119 55.000 0.00 0.00 0.00 3.66
359 361 0.251165 CCGACACAAAATCCCCCACT 60.251 55.000 0.00 0.00 0.00 4.00
360 362 0.538746 ACCGACACAAAATCCCCCAC 60.539 55.000 0.00 0.00 0.00 4.61
361 363 0.538516 CACCGACACAAAATCCCCCA 60.539 55.000 0.00 0.00 0.00 4.96
362 364 0.250989 TCACCGACACAAAATCCCCC 60.251 55.000 0.00 0.00 0.00 5.40
363 365 1.472480 CATCACCGACACAAAATCCCC 59.528 52.381 0.00 0.00 0.00 4.81
364 366 1.472480 CCATCACCGACACAAAATCCC 59.528 52.381 0.00 0.00 0.00 3.85
365 367 2.095263 CACCATCACCGACACAAAATCC 60.095 50.000 0.00 0.00 0.00 3.01
366 368 2.095263 CCACCATCACCGACACAAAATC 60.095 50.000 0.00 0.00 0.00 2.17
367 369 1.885887 CCACCATCACCGACACAAAAT 59.114 47.619 0.00 0.00 0.00 1.82
368 370 1.313772 CCACCATCACCGACACAAAA 58.686 50.000 0.00 0.00 0.00 2.44
369 371 1.169661 GCCACCATCACCGACACAAA 61.170 55.000 0.00 0.00 0.00 2.83
375 377 4.758251 CAGCGCCACCATCACCGA 62.758 66.667 2.29 0.00 0.00 4.69
385 387 4.641645 CTCAACCCCACAGCGCCA 62.642 66.667 2.29 0.00 0.00 5.69
387 389 3.050275 GTCTCAACCCCACAGCGC 61.050 66.667 0.00 0.00 0.00 5.92
388 390 2.738521 CGTCTCAACCCCACAGCG 60.739 66.667 0.00 0.00 0.00 5.18
397 399 0.249155 TCCGTGTTGTCCGTCTCAAC 60.249 55.000 0.00 0.00 43.48 3.18
399 401 1.361271 GTCCGTGTTGTCCGTCTCA 59.639 57.895 0.00 0.00 0.00 3.27
407 409 3.451141 AAAATGCATTGTCCGTGTTGT 57.549 38.095 13.82 0.00 0.00 3.32
479 481 4.533919 TGCCTTCTTTCTCTTCTCTCTG 57.466 45.455 0.00 0.00 0.00 3.35
486 488 4.013050 GCCTAACATGCCTTCTTTCTCTT 58.987 43.478 0.00 0.00 0.00 2.85
502 504 9.794719 ATCAAATTATTCCTAACCTAGCCTAAC 57.205 33.333 0.00 0.00 0.00 2.34
505 507 7.721399 CACATCAAATTATTCCTAACCTAGCCT 59.279 37.037 0.00 0.00 0.00 4.58
515 517 6.127366 ACGCCAAATCACATCAAATTATTCCT 60.127 34.615 0.00 0.00 0.00 3.36
518 520 7.147915 ACCTACGCCAAATCACATCAAATTATT 60.148 33.333 0.00 0.00 0.00 1.40
521 523 4.462483 ACCTACGCCAAATCACATCAAATT 59.538 37.500 0.00 0.00 0.00 1.82
527 529 2.236146 TCTGACCTACGCCAAATCACAT 59.764 45.455 0.00 0.00 0.00 3.21
551 553 3.687551 CGTCTCCCAAGTAGGATCTGGTA 60.688 52.174 0.00 0.00 41.22 3.25
553 555 1.683917 CGTCTCCCAAGTAGGATCTGG 59.316 57.143 0.00 0.00 41.22 3.86
559 561 1.139095 GACGCGTCTCCCAAGTAGG 59.861 63.158 31.12 0.00 37.03 3.18
560 562 1.226323 CGACGCGTCTCCCAAGTAG 60.226 63.158 33.94 13.57 0.00 2.57
589 591 1.975680 AGGCGAAAACTAAGGAGGTCA 59.024 47.619 0.00 0.00 0.00 4.02
591 593 1.975680 TGAGGCGAAAACTAAGGAGGT 59.024 47.619 0.00 0.00 0.00 3.85
595 597 4.755411 TGTATCTGAGGCGAAAACTAAGG 58.245 43.478 0.00 0.00 0.00 2.69
598 600 4.081642 AGCTTGTATCTGAGGCGAAAACTA 60.082 41.667 0.00 0.00 0.00 2.24
605 607 0.461548 TCCAGCTTGTATCTGAGGCG 59.538 55.000 0.00 0.00 33.54 5.52
617 619 3.196469 TCGTCATCTCTCAAATCCAGCTT 59.804 43.478 0.00 0.00 0.00 3.74
624 626 8.085296 GTCCATACTATTCGTCATCTCTCAAAT 58.915 37.037 0.00 0.00 0.00 2.32
641 643 9.304335 TCAAACCGATCTTATATGTCCATACTA 57.696 33.333 0.00 0.00 0.00 1.82
643 645 7.545965 CCTCAAACCGATCTTATATGTCCATAC 59.454 40.741 0.00 0.00 0.00 2.39
645 647 6.467677 CCTCAAACCGATCTTATATGTCCAT 58.532 40.000 0.00 0.00 0.00 3.41
659 661 3.315949 CCCGACCCCTCAAACCGA 61.316 66.667 0.00 0.00 0.00 4.69
670 672 0.037734 AAAATGTGACCTCCCCGACC 59.962 55.000 0.00 0.00 0.00 4.79
672 674 1.060729 TGAAAATGTGACCTCCCCGA 58.939 50.000 0.00 0.00 0.00 5.14
673 675 1.165270 GTGAAAATGTGACCTCCCCG 58.835 55.000 0.00 0.00 0.00 5.73
677 679 1.535462 CGGTGGTGAAAATGTGACCTC 59.465 52.381 0.00 0.00 0.00 3.85
683 685 3.016736 GGATGATCGGTGGTGAAAATGT 58.983 45.455 0.00 0.00 0.00 2.71
684 686 2.032054 CGGATGATCGGTGGTGAAAATG 59.968 50.000 0.00 0.00 0.00 2.32
707 721 4.261405 CCGAAGCTTCTACTCTCTGTATGG 60.261 50.000 23.50 9.05 0.00 2.74
708 722 4.261405 CCCGAAGCTTCTACTCTCTGTATG 60.261 50.000 23.50 3.77 0.00 2.39
716 730 1.878975 GCGCCCGAAGCTTCTACTC 60.879 63.158 23.50 9.33 40.39 2.59
725 739 0.861450 CAATAAAAGCGCGCCCGAAG 60.861 55.000 30.33 8.40 36.29 3.79
728 742 1.867373 CACAATAAAAGCGCGCCCG 60.867 57.895 30.33 10.86 37.57 6.13
786 809 6.550843 TGCATCTACAATCACCGTAAATTTG 58.449 36.000 0.00 0.00 0.00 2.32
810 833 2.552315 CGAACCAAACCACAGCATTACT 59.448 45.455 0.00 0.00 0.00 2.24
817 840 1.535462 GTGGATCGAACCAAACCACAG 59.465 52.381 16.86 0.00 46.75 3.66
917 946 4.821589 GGAGCCTCGCCTCGGTTG 62.822 72.222 0.00 0.00 32.57 3.77
962 991 2.211410 TTGACGAGGGAAGCGGGAA 61.211 57.895 0.00 0.00 0.00 3.97
963 992 2.602267 TTGACGAGGGAAGCGGGA 60.602 61.111 0.00 0.00 0.00 5.14
964 993 2.434359 GTTGACGAGGGAAGCGGG 60.434 66.667 0.00 0.00 0.00 6.13
965 994 2.434359 GGTTGACGAGGGAAGCGG 60.434 66.667 0.00 0.00 0.00 5.52
1328 2000 2.417936 GACGGAGAGATTCGGGGC 59.582 66.667 0.00 0.00 0.00 5.80
1506 2181 2.357637 CGAAATGCATTATTCCCACGGT 59.642 45.455 13.39 0.00 0.00 4.83
1534 2210 3.515104 GGTGGTGATTCATGTCCCATTTT 59.485 43.478 0.00 0.00 0.00 1.82
1535 2211 3.099141 GGTGGTGATTCATGTCCCATTT 58.901 45.455 0.00 0.00 0.00 2.32
1563 2239 3.558411 GAGCCTCGCGCATGACAC 61.558 66.667 8.75 0.00 41.38 3.67
1573 2249 0.598680 CAATTAGGGAGCGAGCCTCG 60.599 60.000 10.36 10.36 41.71 4.63
1598 2275 4.323417 TCGAGCTACCAATGTGAATGTTT 58.677 39.130 0.00 0.00 0.00 2.83
1642 2319 8.110860 AGAAATTCGTGTCATTTTAGGTTCAT 57.889 30.769 0.00 0.00 0.00 2.57
1712 2966 6.590234 AGTCCATAAACCCAGTTTCAATTC 57.410 37.500 0.00 0.00 37.01 2.17
1713 2967 6.994421 AAGTCCATAAACCCAGTTTCAATT 57.006 33.333 0.00 0.00 37.01 2.32
1714 2968 6.782494 AGAAAGTCCATAAACCCAGTTTCAAT 59.218 34.615 0.00 0.00 37.01 2.57
1798 3052 2.488153 GGCAGCGTGGATTTAAAGACTT 59.512 45.455 0.00 0.00 0.00 3.01
1942 3196 6.779117 TCGTAATAGTCTACAGTGTAACAGC 58.221 40.000 4.21 0.00 41.43 4.40
2004 3258 7.007367 CGATTGTCATTTTTATGTTTCACGGAG 59.993 37.037 0.00 0.00 0.00 4.63
2062 3316 3.959975 GCTTGTGCGCGGGAACAA 61.960 61.111 23.27 23.27 39.44 2.83
2096 3350 5.817296 GGCTTTGAAGAAACCAAAACAATCT 59.183 36.000 0.00 0.00 33.68 2.40
2855 4109 3.323691 TGAAAGAGATGAAGTTCACGGGA 59.676 43.478 7.96 0.00 0.00 5.14
2941 4195 9.457436 GTAAAAGGGGAGTTTATCTTAATGTGA 57.543 33.333 0.00 0.00 0.00 3.58
3109 4364 5.538813 TCCATGCTTATGAGTACGGAATAGT 59.461 40.000 0.00 0.00 0.00 2.12
3134 4389 2.859165 ACGCTCAAAATTCTCCAGGA 57.141 45.000 0.00 0.00 0.00 3.86
3221 4476 0.526954 GCGCTCATTGCAGAATTGGG 60.527 55.000 0.00 0.00 43.06 4.12
3274 4529 4.756642 CAGAGCTTCACAACCACAATTCTA 59.243 41.667 0.00 0.00 0.00 2.10
3330 4586 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3331 4587 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3332 4588 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3333 4589 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3334 4590 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3335 4591 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
3336 4592 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
3337 4593 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
3338 4594 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
3339 4595 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
3347 4603 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
3348 4604 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
3350 4606 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
3351 4607 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
3358 4614 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
3359 4615 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
3360 4616 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
3361 4617 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
3362 4618 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
3363 4619 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
3364 4620 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
3365 4621 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
3366 4622 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
3367 4623 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
3368 4624 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
3369 4625 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
3370 4626 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
3371 4627 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
3372 4628 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
3382 4638 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
3383 4639 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
3384 4640 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
3385 4641 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
3403 4659 9.530633 GTCTTAAATTTGTCTAGATACGGATGT 57.469 33.333 0.00 0.00 0.00 3.06
3404 4660 9.529325 TGTCTTAAATTTGTCTAGATACGGATG 57.471 33.333 0.00 0.00 0.00 3.51
3406 4662 9.582431 CTTGTCTTAAATTTGTCTAGATACGGA 57.418 33.333 0.00 0.00 0.00 4.69
3407 4663 9.582431 TCTTGTCTTAAATTTGTCTAGATACGG 57.418 33.333 0.00 0.00 0.00 4.02
3415 4671 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
3416 4672 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
3417 4673 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
3418 4674 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
3419 4675 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
3420 4676 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
3421 4677 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
3422 4678 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
3423 4679 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
3424 4680 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3425 4681 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3426 4682 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3427 4683 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3428 4684 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3429 4685 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3430 4686 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3431 4687 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3432 4688 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3433 4689 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3434 4690 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3435 4691 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3436 4692 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3437 4693 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
3438 4694 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
3439 4695 0.467106 GGTAGTACTCCCTCCGTCCC 60.467 65.000 0.00 0.00 0.00 4.46
3440 4696 0.257039 TGGTAGTACTCCCTCCGTCC 59.743 60.000 6.02 0.00 0.00 4.79
3441 4697 2.361643 ATGGTAGTACTCCCTCCGTC 57.638 55.000 6.02 0.00 0.00 4.79
3442 4698 2.107901 CCTATGGTAGTACTCCCTCCGT 59.892 54.545 6.02 6.24 0.00 4.69
3443 4699 2.374504 TCCTATGGTAGTACTCCCTCCG 59.625 54.545 6.02 0.00 0.00 4.63
3444 4700 3.398629 ACTCCTATGGTAGTACTCCCTCC 59.601 52.174 6.02 3.17 0.00 4.30
3445 4701 4.727792 ACTCCTATGGTAGTACTCCCTC 57.272 50.000 6.02 0.00 0.00 4.30
3446 4702 6.334774 TGATTACTCCTATGGTAGTACTCCCT 59.665 42.308 6.02 1.02 30.74 4.20
3447 4703 6.550163 TGATTACTCCTATGGTAGTACTCCC 58.450 44.000 0.00 0.00 30.74 4.30
3448 4704 7.889073 TGATGATTACTCCTATGGTAGTACTCC 59.111 40.741 0.00 1.20 30.74 3.85
3449 4705 8.865420 TGATGATTACTCCTATGGTAGTACTC 57.135 38.462 0.00 0.00 31.82 2.59
3450 4706 9.830186 AATGATGATTACTCCTATGGTAGTACT 57.170 33.333 0.00 0.00 0.00 2.73
3451 4707 9.862371 CAATGATGATTACTCCTATGGTAGTAC 57.138 37.037 0.00 0.00 0.00 2.73
3452 4708 9.822727 TCAATGATGATTACTCCTATGGTAGTA 57.177 33.333 0.00 0.00 0.00 1.82
3453 4709 8.727100 TCAATGATGATTACTCCTATGGTAGT 57.273 34.615 0.00 0.00 0.00 2.73
3454 4710 9.597170 CATCAATGATGATTACTCCTATGGTAG 57.403 37.037 17.76 0.00 43.89 3.18
3455 4711 9.325248 TCATCAATGATGATTACTCCTATGGTA 57.675 33.333 20.85 0.00 43.89 3.25
3456 4712 8.211030 TCATCAATGATGATTACTCCTATGGT 57.789 34.615 20.85 0.00 43.89 3.55
3457 4713 9.163899 CTTCATCAATGATGATTACTCCTATGG 57.836 37.037 24.53 0.00 46.52 2.74
3499 4813 4.356405 TGTATCCTGCCAGAATACATGG 57.644 45.455 0.00 0.00 41.04 3.66
3502 4817 4.716784 AGAGTTGTATCCTGCCAGAATACA 59.283 41.667 0.00 0.00 0.00 2.29
3505 4820 4.472833 AGAAGAGTTGTATCCTGCCAGAAT 59.527 41.667 0.00 0.00 0.00 2.40
3619 4934 3.805207 ACTCCCAATTACATAGCCGTTC 58.195 45.455 0.00 0.00 0.00 3.95
3733 5048 0.037139 TCGACACCCCAACATAACCG 60.037 55.000 0.00 0.00 0.00 4.44
3743 5058 2.048503 CAAGGACGTCGACACCCC 60.049 66.667 17.16 12.59 0.00 4.95
3816 5132 2.357637 GGTACTGCACAAACTTGCTTCA 59.642 45.455 0.00 0.00 43.41 3.02
3925 5241 3.895232 TGATGGTCTCTTCTTACTGCC 57.105 47.619 0.00 0.00 0.00 4.85
4057 5373 8.854614 AGTAGAAACTATTTGACTGAAGCATT 57.145 30.769 0.00 0.00 32.84 3.56
4256 5572 1.691195 GGGGAGACTGGAGCCTTAGC 61.691 65.000 0.00 0.00 40.32 3.09
4257 5573 1.051556 GGGGGAGACTGGAGCCTTAG 61.052 65.000 0.00 0.00 0.00 2.18
4258 5574 1.003051 GGGGGAGACTGGAGCCTTA 59.997 63.158 0.00 0.00 0.00 2.69
4259 5575 2.285743 GGGGGAGACTGGAGCCTT 60.286 66.667 0.00 0.00 0.00 4.35
4260 5576 1.603633 TATGGGGGAGACTGGAGCCT 61.604 60.000 0.00 0.00 0.00 4.58
4261 5577 0.474660 ATATGGGGGAGACTGGAGCC 60.475 60.000 0.00 0.00 0.00 4.70
4262 5578 1.439543 AATATGGGGGAGACTGGAGC 58.560 55.000 0.00 0.00 0.00 4.70
4263 5579 4.717280 GGTATAATATGGGGGAGACTGGAG 59.283 50.000 0.00 0.00 0.00 3.86
4362 5678 9.736023 GTTTTGTTTTCTAGATTTGTGTGATCT 57.264 29.630 0.00 0.00 37.59 2.75
4398 5715 1.750206 ACAGCAACACTTGTGAATGCA 59.250 42.857 25.06 0.00 39.42 3.96
4422 5739 2.805671 CTGCACATACGACTCAAAACCA 59.194 45.455 0.00 0.00 0.00 3.67
4425 5742 1.459209 CGCTGCACATACGACTCAAAA 59.541 47.619 0.00 0.00 0.00 2.44
4453 5770 2.939460 ATTATTGTTGCTGGTTCCGC 57.061 45.000 0.00 0.00 0.00 5.54
4511 5828 4.889409 AGTACAAATAGCATCCAACATGGG 59.111 41.667 0.00 0.00 38.32 4.00
4647 6014 2.354604 CCTGACTTGGAAGAGAAGCTCC 60.355 54.545 0.00 0.00 0.00 4.70
4682 6049 1.212934 AGGGTCCTCTACTGTCCGGA 61.213 60.000 0.00 0.00 0.00 5.14
4865 6232 6.317789 TCTGCAGTAAAATGGAGTTTCTTG 57.682 37.500 14.67 0.00 39.46 3.02
4885 6252 4.726021 GCAAATGATGTCGCACTAGTTCTG 60.726 45.833 0.00 0.00 0.00 3.02
4910 6277 5.426185 AGAATGGCCACAACCAAATATTCAT 59.574 36.000 8.16 0.00 44.65 2.57
5048 6416 7.701539 TCTAGTAATGCCAATTTCATGTTGT 57.298 32.000 0.00 0.00 0.00 3.32
5153 6521 3.937814 TGTTTTGGACATAGACGCAGAT 58.062 40.909 0.00 0.00 32.00 2.90
5396 6764 0.963962 ATTGGTTCCAAGCAGCACAG 59.036 50.000 10.10 0.00 37.74 3.66
5401 6769 2.886523 TCAAGACATTGGTTCCAAGCAG 59.113 45.455 10.10 5.44 37.74 4.24
5472 6840 8.272545 TCAACTCTCAAATATTCCACTGAATG 57.727 34.615 0.00 0.00 41.31 2.67
5605 6973 7.549839 AGGTATTAGTCGCTATTACAACAACA 58.450 34.615 14.80 0.00 29.56 3.33
5620 6988 7.548427 GTGAAGTCCAAAAGGTAGGTATTAGTC 59.452 40.741 0.00 0.00 0.00 2.59
5644 7012 4.582701 TGAGTTGGTATTGCAAAAGGTG 57.417 40.909 1.71 0.00 0.00 4.00
5825 7193 4.882671 AACGCTCATATCCAATGTCAAC 57.117 40.909 0.00 0.00 0.00 3.18
5896 7264 3.328505 CCACTGCATGAAAAATTCCCAC 58.671 45.455 0.00 0.00 0.00 4.61
5939 7307 9.255304 GGCTAAAACAACATCTATTTTGAAACA 57.745 29.630 0.00 0.00 0.00 2.83
6000 7368 8.430063 CAGAATGACTTAAATTGCATTGACAAC 58.570 33.333 0.00 0.00 39.69 3.32
6004 7372 8.579006 AGAACAGAATGACTTAAATTGCATTGA 58.421 29.630 0.00 0.00 39.69 2.57
6088 7456 0.745468 GGGTCAACTCTAGCCTACCG 59.255 60.000 0.00 0.00 0.00 4.02
6169 7537 3.266772 TCACCAAAGAACTAGCCATGGAT 59.733 43.478 18.40 13.25 0.00 3.41
6208 7576 3.625764 CAGAGGAGTCCGTAAAGAGAGAG 59.374 52.174 2.76 0.00 0.00 3.20
6230 7598 4.843728 TGGGGTAGATCAAACTTGACATC 58.156 43.478 0.00 0.00 40.49 3.06
6252 7620 5.181748 GTGCTGATAATGTCAAGAGAGGTT 58.818 41.667 0.00 0.00 36.14 3.50
6276 7644 1.910671 TGCATAGGGGACGGTTAAAGT 59.089 47.619 0.00 0.00 0.00 2.66
6314 7687 0.389948 AACGTCGGCTGAGATGGTTC 60.390 55.000 0.00 0.00 0.00 3.62
6330 7703 2.483876 TGAAGAGAAGCTTGTCCAACG 58.516 47.619 19.26 0.00 36.83 4.10
6353 7726 1.218316 GAGAGTTGGGGTAGCACCG 59.782 63.158 0.00 0.00 39.83 4.94
6372 7745 6.194967 TCGGGTCTGGTATGATGATATATGT 58.805 40.000 0.00 0.00 0.00 2.29
6423 7802 0.318699 GTAGCGGAGATGCGCATGTA 60.319 55.000 30.76 5.02 40.67 2.29
6673 8053 0.815213 TTGATGATACCAGCAGGCGC 60.815 55.000 0.00 0.00 40.09 6.53
6713 8093 6.028131 TCAATGGAGAGAATGGGAGCTATAT 58.972 40.000 0.00 0.00 0.00 0.86
6769 8149 3.835978 TGGTGAAGGACGAGGAGATTAAA 59.164 43.478 0.00 0.00 0.00 1.52
6840 8220 3.133721 CGAGAAAGGAAGATGAGGGATGT 59.866 47.826 0.00 0.00 0.00 3.06
6841 8221 3.494048 CCGAGAAAGGAAGATGAGGGATG 60.494 52.174 0.00 0.00 0.00 3.51
6842 8222 2.703007 CCGAGAAAGGAAGATGAGGGAT 59.297 50.000 0.00 0.00 0.00 3.85
6843 8223 2.111384 CCGAGAAAGGAAGATGAGGGA 58.889 52.381 0.00 0.00 0.00 4.20
6844 8224 2.111384 TCCGAGAAAGGAAGATGAGGG 58.889 52.381 0.00 0.00 37.36 4.30
6845 8225 3.640967 AGATCCGAGAAAGGAAGATGAGG 59.359 47.826 0.00 0.00 44.50 3.86
6846 8226 4.935352 AGATCCGAGAAAGGAAGATGAG 57.065 45.455 0.00 0.00 44.50 2.90
6857 8241 7.004691 TCTATAAGATGGTCAAGATCCGAGAA 58.995 38.462 0.00 0.00 0.00 2.87
6898 8282 6.544197 CCTCTACTAGCACTTAGACATGAAGA 59.456 42.308 0.00 0.00 33.39 2.87
6903 8287 5.103855 AGGACCTCTACTAGCACTTAGACAT 60.104 44.000 0.00 0.00 33.39 3.06
6904 8288 4.227754 AGGACCTCTACTAGCACTTAGACA 59.772 45.833 0.00 0.00 33.39 3.41
6907 8291 4.783055 TGAGGACCTCTACTAGCACTTAG 58.217 47.826 22.14 0.00 35.39 2.18
6961 8348 0.249447 GGCAAAGAAAGCCGCAAAGT 60.249 50.000 0.00 0.00 43.15 2.66
7013 8400 1.296715 CTACACCTGCCACCTGGAC 59.703 63.158 0.00 0.00 37.39 4.02
7022 8409 3.343617 TGTTTTAGATGCCTACACCTGC 58.656 45.455 0.00 0.00 0.00 4.85
7023 8410 4.579869 ACTGTTTTAGATGCCTACACCTG 58.420 43.478 0.00 0.00 0.00 4.00
7024 8411 4.532521 AGACTGTTTTAGATGCCTACACCT 59.467 41.667 0.00 0.00 0.00 4.00
7025 8412 4.833390 AGACTGTTTTAGATGCCTACACC 58.167 43.478 0.00 0.00 0.00 4.16
7026 8413 9.765795 ATATAAGACTGTTTTAGATGCCTACAC 57.234 33.333 0.00 0.00 0.00 2.90
7027 8414 9.764363 CATATAAGACTGTTTTAGATGCCTACA 57.236 33.333 11.25 0.00 0.00 2.74
7028 8415 9.982651 TCATATAAGACTGTTTTAGATGCCTAC 57.017 33.333 16.47 0.00 32.50 3.18
7038 8425 8.786826 TTCAATCGGTCATATAAGACTGTTTT 57.213 30.769 14.82 8.66 43.72 2.43
7049 8436 9.123902 TGAAATGATTTCTTCAATCGGTCATAT 57.876 29.630 17.76 0.00 44.07 1.78
7107 9972 2.500392 TTTAATCTGTTGGGACCCCG 57.500 50.000 8.45 0.00 39.42 5.73
7350 10379 0.811281 CATTGCCCGAGAAAAGTCCC 59.189 55.000 0.00 0.00 0.00 4.46
7354 10383 4.157656 TGATAAACCATTGCCCGAGAAAAG 59.842 41.667 0.00 0.00 0.00 2.27
7361 10390 4.821805 AGACTAATGATAAACCATTGCCCG 59.178 41.667 0.00 0.00 37.34 6.13
7463 10492 7.523219 TGATAAAAATGCGTAACAACCTACAG 58.477 34.615 0.00 0.00 0.00 2.74
7487 10516 7.202016 TGTAAACTGTTGCCTCTTTATTCTG 57.798 36.000 0.00 0.00 0.00 3.02
7611 10640 3.055747 GGTAAAGGAGTGGAGAAGTCAGG 60.056 52.174 0.00 0.00 0.00 3.86
7723 10752 9.979270 CATCAACATGTCACTTTCTATTCTTAC 57.021 33.333 0.00 0.00 0.00 2.34
7884 10913 0.669318 TTTCACCTCCACGCGATGAC 60.669 55.000 15.93 0.00 0.00 3.06
7891 10920 4.247267 TGTACTTACTTTCACCTCCACG 57.753 45.455 0.00 0.00 0.00 4.94
7953 10982 9.888878 GACATTCAAACATGAACATATAGATGG 57.111 33.333 0.00 0.00 37.39 3.51
8026 11055 5.682862 GCTGGCATCAAATAATAGACAAACG 59.317 40.000 0.00 0.00 0.00 3.60
8091 11121 0.618968 AACCCCCAAACCAAACTGCA 60.619 50.000 0.00 0.00 0.00 4.41
8103 11133 1.207488 ATGCAGCTACAGAACCCCCA 61.207 55.000 0.00 0.00 0.00 4.96
8243 11340 3.792401 CAATGTCTGGAGTGGCGTAATA 58.208 45.455 0.00 0.00 0.00 0.98
8326 11496 0.239347 GTGTGGCAGCACTGAATGAC 59.761 55.000 0.81 0.00 36.51 3.06
8440 11611 6.332103 TGGAGAAACCTAGTAGAGCTCCTATA 59.668 42.308 10.93 0.00 40.73 1.31
8441 11612 5.134679 TGGAGAAACCTAGTAGAGCTCCTAT 59.865 44.000 10.93 0.00 40.73 2.57
8616 11787 1.148310 CGACCACAACTGGCTACAAG 58.852 55.000 0.00 0.00 42.08 3.16
8639 11810 3.395941 ACAAGGGGAAAACATCTCTCTGT 59.604 43.478 0.00 0.00 0.00 3.41
8707 11879 1.801395 CGTTAGACACAGCCCCATACG 60.801 57.143 0.00 0.00 0.00 3.06
8744 11916 3.617263 GGATCCGTAGCACAAAACAGTAG 59.383 47.826 0.00 0.00 0.00 2.57
8749 11921 0.725117 CCGGATCCGTAGCACAAAAC 59.275 55.000 31.22 0.00 37.81 2.43
8774 11946 2.202932 CCGTTAGCAGCCTCGCAT 60.203 61.111 0.00 0.00 0.00 4.73
8775 11947 4.451150 CCCGTTAGCAGCCTCGCA 62.451 66.667 0.00 0.00 0.00 5.10
8776 11948 4.452733 ACCCGTTAGCAGCCTCGC 62.453 66.667 0.00 0.00 0.00 5.03
8777 11949 2.509336 CACCCGTTAGCAGCCTCG 60.509 66.667 0.00 0.00 0.00 4.63
8778 11950 2.820037 GCACCCGTTAGCAGCCTC 60.820 66.667 0.00 0.00 0.00 4.70
8779 11951 3.316573 GAGCACCCGTTAGCAGCCT 62.317 63.158 0.00 0.00 0.00 4.58
8780 11952 2.820037 GAGCACCCGTTAGCAGCC 60.820 66.667 0.00 0.00 0.00 4.85
8781 11953 1.026718 ATTGAGCACCCGTTAGCAGC 61.027 55.000 0.00 0.00 0.00 5.25
8782 11954 2.309528 TATTGAGCACCCGTTAGCAG 57.690 50.000 0.00 0.00 0.00 4.24
8783 11955 2.434336 AGATATTGAGCACCCGTTAGCA 59.566 45.455 0.00 0.00 0.00 3.49
8784 11956 2.802816 CAGATATTGAGCACCCGTTAGC 59.197 50.000 0.00 0.00 0.00 3.09
8786 11958 2.434336 AGCAGATATTGAGCACCCGTTA 59.566 45.455 0.00 0.00 0.00 3.18
8787 11959 1.210478 AGCAGATATTGAGCACCCGTT 59.790 47.619 0.00 0.00 0.00 4.44
8834 12006 4.742659 TCATGTTCTAAAACGCCAAAAAGC 59.257 37.500 0.00 0.00 38.28 3.51
8849 12021 5.163281 ACAATCTGCTCTCTTCATGTTCT 57.837 39.130 0.00 0.00 0.00 3.01
8956 12142 2.811431 CAAAGTGCCGATCCAACACTAA 59.189 45.455 9.58 0.00 43.63 2.24
9030 12216 2.819422 TCGTTACTCGACGATTCCAG 57.181 50.000 0.00 0.00 46.09 3.86
9062 12248 4.640201 CCTTGACCTTCTGTGAAACTCAAA 59.360 41.667 0.00 0.00 38.04 2.69
9070 12256 1.694150 CCTCACCTTGACCTTCTGTGA 59.306 52.381 0.00 0.00 34.95 3.58
9187 12373 2.293399 AGATCCGCGCCAATTAATTTCC 59.707 45.455 0.00 0.00 0.00 3.13
9208 12394 4.142902 GCTGTAAACAGTACGTACTACGGA 60.143 45.833 27.72 14.40 45.03 4.69
9214 12400 4.070581 TCTCGCTGTAAACAGTACGTAC 57.929 45.455 18.10 18.10 45.45 3.67
9215 12401 4.952262 ATCTCGCTGTAAACAGTACGTA 57.048 40.909 11.54 0.00 45.45 3.57
9216 12402 3.844577 ATCTCGCTGTAAACAGTACGT 57.155 42.857 11.54 0.00 45.45 3.57
9217 12403 4.033684 GGTATCTCGCTGTAAACAGTACG 58.966 47.826 11.54 7.69 45.45 3.67
9255 12441 5.235516 TGCTACTCCGGTAAGAAAAGAAAG 58.764 41.667 0.00 0.00 0.00 2.62
9256 12442 5.217978 TGCTACTCCGGTAAGAAAAGAAA 57.782 39.130 0.00 0.00 0.00 2.52
9257 12443 4.877378 TGCTACTCCGGTAAGAAAAGAA 57.123 40.909 0.00 0.00 0.00 2.52
9258 12444 4.817517 CTTGCTACTCCGGTAAGAAAAGA 58.182 43.478 0.00 0.00 0.00 2.52
9259 12445 3.371285 GCTTGCTACTCCGGTAAGAAAAG 59.629 47.826 0.00 6.65 0.00 2.27
9260 12446 3.007614 AGCTTGCTACTCCGGTAAGAAAA 59.992 43.478 0.00 0.00 0.00 2.29
9419 12612 2.933260 GTTTGCAAAATCCAAACGGTGT 59.067 40.909 14.67 0.00 41.55 4.16
9465 12658 2.032030 CGTGATGTTTTTCTGGCGTCTT 60.032 45.455 0.00 0.00 0.00 3.01
9484 12677 0.942252 GTCTTTTCGGTTCCTTGCGT 59.058 50.000 0.00 0.00 0.00 5.24
9572 12766 7.156876 TGCCTGATGTTACCTTATTTTTCAG 57.843 36.000 0.00 0.00 0.00 3.02
9672 12866 0.608308 GAAACCCCTTCCCAGAACCG 60.608 60.000 0.00 0.00 0.00 4.44
9686 12880 2.370849 TCACCTTGGGTAGTCTGAAACC 59.629 50.000 2.55 2.55 32.11 3.27
9687 12881 3.557264 CCTCACCTTGGGTAGTCTGAAAC 60.557 52.174 0.00 0.00 32.11 2.78
9688 12882 2.637872 CCTCACCTTGGGTAGTCTGAAA 59.362 50.000 0.00 0.00 32.11 2.69
9689 12883 2.257207 CCTCACCTTGGGTAGTCTGAA 58.743 52.381 0.00 0.00 32.11 3.02
9699 12893 1.208293 GGAGAAGCTACCTCACCTTGG 59.792 57.143 15.34 0.00 32.48 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.