Multiple sequence alignment - TraesCS7A01G309200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G309200 chr7A 100.000 5092 0 0 1 5092 437065907 437070998 0.000000e+00 9404.0
1 TraesCS7A01G309200 chr7A 93.478 46 3 0 4460 4505 520786230 520786275 9.150000e-08 69.4
2 TraesCS7A01G309200 chr7A 91.111 45 2 2 4448 4490 575281006 575281050 5.510000e-05 60.2
3 TraesCS7A01G309200 chr7D 91.614 3148 152 60 424 3532 387218784 387221858 0.000000e+00 4248.0
4 TraesCS7A01G309200 chr7D 88.241 1063 77 30 3559 4588 387221981 387223028 0.000000e+00 1227.0
5 TraesCS7A01G309200 chr7D 87.872 437 26 9 1 429 387215393 387215810 5.930000e-134 488.0
6 TraesCS7A01G309200 chr7D 94.928 138 7 0 4701 4838 387223067 387223204 3.090000e-52 217.0
7 TraesCS7A01G309200 chr7B 94.754 1811 57 21 1739 3532 382277452 382279241 0.000000e+00 2784.0
8 TraesCS7A01G309200 chr7B 87.879 1485 104 41 295 1741 382275686 382277132 0.000000e+00 1676.0
9 TraesCS7A01G309200 chr7B 86.598 776 68 18 3559 4316 382279364 382280121 0.000000e+00 824.0
10 TraesCS7A01G309200 chr7B 85.619 299 23 8 1 298 382275103 382275382 3.850000e-76 296.0
11 TraesCS7A01G309200 chr7B 92.982 57 3 1 4784 4840 382281548 382281603 1.180000e-11 82.4
12 TraesCS7A01G309200 chr6D 93.023 86 4 1 4381 4464 344175781 344175866 1.920000e-24 124.0
13 TraesCS7A01G309200 chr6D 100.000 40 0 0 5053 5092 449500559 449500598 1.970000e-09 75.0
14 TraesCS7A01G309200 chr1B 93.902 82 5 0 4381 4462 246771003 246771084 1.920000e-24 124.0
15 TraesCS7A01G309200 chr6B 91.954 87 4 2 4381 4464 269946856 269946942 8.960000e-23 119.0
16 TraesCS7A01G309200 chr6B 89.535 86 7 1 4381 4464 345218691 345218606 1.940000e-19 108.0
17 TraesCS7A01G309200 chr6B 89.535 86 6 3 4381 4464 183308265 183308349 6.970000e-19 106.0
18 TraesCS7A01G309200 chr6B 100.000 40 0 0 5053 5092 1128170 1128209 1.970000e-09 75.0
19 TraesCS7A01G309200 chr4A 90.698 86 6 1 4381 4464 490599572 490599657 4.170000e-21 113.0
20 TraesCS7A01G309200 chr4A 91.667 48 3 1 4455 4502 646585347 646585301 1.180000e-06 65.8
21 TraesCS7A01G309200 chr3D 90.361 83 6 1 4381 4461 437486557 437486639 1.940000e-19 108.0
22 TraesCS7A01G309200 chr3D 89.796 49 5 0 4455 4503 560936434 560936386 4.260000e-06 63.9
23 TraesCS7A01G309200 chr3A 90.476 84 5 2 4381 4462 323438487 323438569 1.940000e-19 108.0
24 TraesCS7A01G309200 chr3A 97.727 44 1 0 5049 5092 199578451 199578408 5.470000e-10 76.8
25 TraesCS7A01G309200 chr5D 100.000 45 0 0 5048 5092 479391878 479391922 3.270000e-12 84.2
26 TraesCS7A01G309200 chrUn 100.000 41 0 0 5052 5092 30437126 30437086 5.470000e-10 76.8
27 TraesCS7A01G309200 chr2A 100.000 41 0 0 5052 5092 13257680 13257640 5.470000e-10 76.8
28 TraesCS7A01G309200 chr1A 100.000 41 0 0 5052 5092 555662334 555662294 5.470000e-10 76.8
29 TraesCS7A01G309200 chr1A 86.667 60 6 2 4444 4503 8131704 8131647 1.180000e-06 65.8
30 TraesCS7A01G309200 chr1A 90.196 51 3 2 4448 4496 351005520 351005470 1.180000e-06 65.8
31 TraesCS7A01G309200 chr5A 95.652 46 2 0 5047 5092 41702631 41702676 1.970000e-09 75.0
32 TraesCS7A01G309200 chr5A 84.746 59 8 1 4445 4502 144705184 144705126 1.980000e-04 58.4
33 TraesCS7A01G309200 chr2B 94.000 50 2 1 5043 5092 759143294 759143342 1.970000e-09 75.0
34 TraesCS7A01G309200 chr2B 88.889 54 3 3 4445 4496 197957524 197957472 4.260000e-06 63.9
35 TraesCS7A01G309200 chr1D 92.000 50 4 0 4460 4509 429703183 429703134 2.540000e-08 71.3
36 TraesCS7A01G309200 chr3B 91.667 48 4 0 4461 4508 725802537 725802490 3.290000e-07 67.6
37 TraesCS7A01G309200 chr6A 86.667 60 7 1 4460 4518 538048043 538048102 1.180000e-06 65.8
38 TraesCS7A01G309200 chr2D 91.667 48 1 3 4445 4490 14893763 14893809 4.260000e-06 63.9
39 TraesCS7A01G309200 chr4B 89.583 48 2 3 4445 4490 17268082 17268128 1.980000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G309200 chr7A 437065907 437070998 5091 False 9404.00 9404 100.00000 1 5092 1 chr7A.!!$F1 5091
1 TraesCS7A01G309200 chr7D 387215393 387223204 7811 False 1545.00 4248 90.66375 1 4838 4 chr7D.!!$F1 4837
2 TraesCS7A01G309200 chr7B 382275103 382281603 6500 False 1132.48 2784 89.56640 1 4840 5 chr7B.!!$F1 4839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
845 4208 0.034863 AACCAAGTTCCACACCGTGT 60.035 50.000 0.0 0.0 0.00 4.49 F
1277 4650 0.240145 GTTAAAACCAGGCACGGAGC 59.760 55.000 0.0 0.0 44.65 4.70 F
2680 6385 1.886542 AGAATCCAGTCCCGTTTTTGC 59.113 47.619 0.0 0.0 0.00 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 5911 1.303091 CCGAACCGGTCCATCAAACC 61.303 60.000 8.04 0.0 42.73 3.27 R
2853 6558 1.806542 CAGGTTCGGAAGTTGATGGTG 59.193 52.381 0.00 0.0 0.00 4.17 R
4344 8197 0.179040 AAGACGTTTTTGCGGAGGGA 60.179 50.000 0.00 0.0 35.98 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 4.974368 TTTGTATTATTGTTGCCCGGAG 57.026 40.909 0.73 0.00 0.00 4.63
115 116 6.751514 TGTGTAGATGTGTTTGTTGTCTTT 57.248 33.333 0.00 0.00 0.00 2.52
116 117 7.851387 TGTGTAGATGTGTTTGTTGTCTTTA 57.149 32.000 0.00 0.00 0.00 1.85
117 118 8.270080 TGTGTAGATGTGTTTGTTGTCTTTAA 57.730 30.769 0.00 0.00 0.00 1.52
118 119 8.394877 TGTGTAGATGTGTTTGTTGTCTTTAAG 58.605 33.333 0.00 0.00 0.00 1.85
119 120 7.855904 GTGTAGATGTGTTTGTTGTCTTTAAGG 59.144 37.037 0.00 0.00 0.00 2.69
120 121 7.554835 TGTAGATGTGTTTGTTGTCTTTAAGGT 59.445 33.333 0.00 0.00 0.00 3.50
121 122 6.795399 AGATGTGTTTGTTGTCTTTAAGGTG 58.205 36.000 0.00 0.00 0.00 4.00
122 123 4.739195 TGTGTTTGTTGTCTTTAAGGTGC 58.261 39.130 0.00 0.00 0.00 5.01
123 124 4.461081 TGTGTTTGTTGTCTTTAAGGTGCT 59.539 37.500 0.00 0.00 0.00 4.40
124 125 4.798387 GTGTTTGTTGTCTTTAAGGTGCTG 59.202 41.667 0.00 0.00 0.00 4.41
125 126 4.461081 TGTTTGTTGTCTTTAAGGTGCTGT 59.539 37.500 0.00 0.00 0.00 4.40
161 162 1.180029 CTCCCAAAGATGCAACCTGG 58.820 55.000 5.88 5.88 0.00 4.45
236 251 5.546526 TGTCTGTATGCACATTGTACTTCA 58.453 37.500 0.00 0.00 33.14 3.02
237 252 5.994668 TGTCTGTATGCACATTGTACTTCAA 59.005 36.000 0.00 0.00 40.53 2.69
238 253 6.484977 TGTCTGTATGCACATTGTACTTCAAA 59.515 34.615 0.00 0.00 39.62 2.69
239 254 6.797033 GTCTGTATGCACATTGTACTTCAAAC 59.203 38.462 0.00 0.00 39.62 2.93
240 255 6.484977 TCTGTATGCACATTGTACTTCAAACA 59.515 34.615 0.00 0.00 39.62 2.83
241 256 7.174772 TCTGTATGCACATTGTACTTCAAACAT 59.825 33.333 0.00 0.00 39.62 2.71
242 257 8.329203 TGTATGCACATTGTACTTCAAACATA 57.671 30.769 0.00 0.00 39.62 2.29
243 258 8.787852 TGTATGCACATTGTACTTCAAACATAA 58.212 29.630 0.00 0.00 39.62 1.90
244 259 9.619316 GTATGCACATTGTACTTCAAACATAAA 57.381 29.630 0.00 0.00 39.62 1.40
246 261 8.572828 TGCACATTGTACTTCAAACATAAAAG 57.427 30.769 0.00 0.00 39.62 2.27
247 262 8.409371 TGCACATTGTACTTCAAACATAAAAGA 58.591 29.630 0.00 0.00 39.62 2.52
248 263 9.243637 GCACATTGTACTTCAAACATAAAAGAA 57.756 29.630 0.00 0.00 39.62 2.52
318 641 0.309302 TTGCACGTTTTCCATGTCCG 59.691 50.000 0.00 0.00 0.00 4.79
326 649 4.162812 CGTTTTCCATGTCCGTTTATTGG 58.837 43.478 0.00 0.00 0.00 3.16
330 653 2.026729 TCCATGTCCGTTTATTGGCTCA 60.027 45.455 0.00 0.00 0.00 4.26
408 738 7.746475 CGAATGAAGTTGTTAAGATCCTGTTTC 59.254 37.037 0.00 0.00 0.00 2.78
429 3738 4.566004 TCGAAGGCGGATATATTTCTTGG 58.434 43.478 0.00 0.00 38.28 3.61
430 3739 3.125316 CGAAGGCGGATATATTTCTTGGC 59.875 47.826 0.00 5.08 0.00 4.52
433 3742 2.673368 GGCGGATATATTTCTTGGCTCG 59.327 50.000 0.00 0.00 0.00 5.03
434 3743 2.094417 GCGGATATATTTCTTGGCTCGC 59.906 50.000 0.00 0.00 0.00 5.03
447 3756 0.097150 GGCTCGCGAGGAAATTGAAC 59.903 55.000 35.10 16.12 0.00 3.18
454 3763 2.095212 GCGAGGAAATTGAACTGTTCCC 60.095 50.000 17.26 10.70 41.55 3.97
461 3770 6.265422 AGGAAATTGAACTGTTCCCTGTAAAG 59.735 38.462 17.26 0.00 41.55 1.85
495 3804 2.365635 GCCTCCAGACAGGGCCTA 60.366 66.667 5.28 0.00 39.96 3.93
503 3814 1.224592 GACAGGGCCTATGTGGTGG 59.775 63.158 17.31 0.00 38.35 4.61
506 3817 2.275418 GGGCCTATGTGGTGGTGG 59.725 66.667 0.84 0.00 38.35 4.61
528 3840 1.265905 GTTACTTGTGCGGGAAGTTGG 59.734 52.381 0.00 0.00 35.30 3.77
533 3845 1.966451 GTGCGGGAAGTTGGTGGAG 60.966 63.158 0.00 0.00 0.00 3.86
545 3857 0.618458 TGGTGGAGATGTACTTGCCC 59.382 55.000 0.00 0.00 0.00 5.36
546 3858 0.462047 GGTGGAGATGTACTTGCCCG 60.462 60.000 0.00 0.00 0.00 6.13
548 3860 1.523938 GGAGATGTACTTGCCCGCC 60.524 63.158 0.00 0.00 0.00 6.13
549 3861 1.220749 GAGATGTACTTGCCCGCCA 59.779 57.895 0.00 0.00 0.00 5.69
551 3863 1.819632 GATGTACTTGCCCGCCAGG 60.820 63.158 0.00 0.00 39.47 4.45
600 3912 3.565764 TGGCCATATGTTTCTCCTCAG 57.434 47.619 0.00 0.00 0.00 3.35
602 3914 2.421952 GGCCATATGTTTCTCCTCAGCA 60.422 50.000 0.00 0.00 0.00 4.41
603 3915 2.877168 GCCATATGTTTCTCCTCAGCAG 59.123 50.000 1.24 0.00 0.00 4.24
604 3916 3.474600 CCATATGTTTCTCCTCAGCAGG 58.525 50.000 1.24 0.00 42.01 4.85
625 3942 0.314935 ATTGTTTGCGTTGCCTCTGG 59.685 50.000 0.00 0.00 0.00 3.86
648 3994 4.154737 GTGTGTGCTGCTCAAGATAATTCA 59.845 41.667 5.91 0.00 0.00 2.57
649 3995 4.761227 TGTGTGCTGCTCAAGATAATTCAA 59.239 37.500 5.91 0.00 0.00 2.69
650 3996 5.106436 TGTGTGCTGCTCAAGATAATTCAAG 60.106 40.000 5.91 0.00 0.00 3.02
651 3997 4.142534 TGTGCTGCTCAAGATAATTCAAGC 60.143 41.667 1.33 0.00 0.00 4.01
652 3998 4.011698 TGCTGCTCAAGATAATTCAAGCA 58.988 39.130 0.00 0.00 37.41 3.91
653 3999 4.460034 TGCTGCTCAAGATAATTCAAGCAA 59.540 37.500 0.00 0.00 39.08 3.91
654 4000 5.126545 TGCTGCTCAAGATAATTCAAGCAAT 59.873 36.000 0.00 0.00 39.08 3.56
655 4001 5.686397 GCTGCTCAAGATAATTCAAGCAATC 59.314 40.000 0.00 0.00 39.08 2.67
656 4002 6.459848 GCTGCTCAAGATAATTCAAGCAATCT 60.460 38.462 0.00 0.00 39.08 2.40
657 4003 6.792326 TGCTCAAGATAATTCAAGCAATCTG 58.208 36.000 0.00 0.00 36.86 2.90
658 4004 6.600427 TGCTCAAGATAATTCAAGCAATCTGA 59.400 34.615 0.00 0.00 36.86 3.27
659 4005 7.284716 TGCTCAAGATAATTCAAGCAATCTGAT 59.715 33.333 0.00 0.00 36.86 2.90
660 4006 8.136165 GCTCAAGATAATTCAAGCAATCTGATT 58.864 33.333 0.00 0.00 0.00 2.57
662 4008 9.797556 TCAAGATAATTCAAGCAATCTGATTTG 57.202 29.630 0.00 0.00 0.00 2.32
663 4009 9.582431 CAAGATAATTCAAGCAATCTGATTTGT 57.418 29.630 0.00 0.00 0.00 2.83
664 4010 9.798994 AAGATAATTCAAGCAATCTGATTTGTC 57.201 29.630 0.00 0.00 0.00 3.18
665 4011 9.186837 AGATAATTCAAGCAATCTGATTTGTCT 57.813 29.630 0.00 0.00 0.00 3.41
666 4012 9.448294 GATAATTCAAGCAATCTGATTTGTCTC 57.552 33.333 0.00 0.00 0.00 3.36
667 4013 7.463961 AATTCAAGCAATCTGATTTGTCTCT 57.536 32.000 0.00 0.00 0.00 3.10
668 4014 6.889301 TTCAAGCAATCTGATTTGTCTCTT 57.111 33.333 0.00 0.00 0.00 2.85
669 4015 6.492007 TCAAGCAATCTGATTTGTCTCTTC 57.508 37.500 0.00 0.00 0.00 2.87
670 4016 6.236409 TCAAGCAATCTGATTTGTCTCTTCT 58.764 36.000 0.00 0.00 0.00 2.85
671 4017 6.713903 TCAAGCAATCTGATTTGTCTCTTCTT 59.286 34.615 0.00 0.00 0.00 2.52
672 4018 7.230108 TCAAGCAATCTGATTTGTCTCTTCTTT 59.770 33.333 0.00 0.00 0.00 2.52
673 4019 7.521871 AGCAATCTGATTTGTCTCTTCTTTT 57.478 32.000 0.00 0.00 0.00 2.27
674 4020 7.949434 AGCAATCTGATTTGTCTCTTCTTTTT 58.051 30.769 0.00 0.00 0.00 1.94
707 4053 5.478407 TCGTGCTTTATTGATCAAGAGACA 58.522 37.500 14.54 6.04 0.00 3.41
708 4054 5.578336 TCGTGCTTTATTGATCAAGAGACAG 59.422 40.000 14.54 7.76 0.00 3.51
709 4055 5.349817 CGTGCTTTATTGATCAAGAGACAGT 59.650 40.000 14.54 0.00 0.00 3.55
710 4056 6.541086 GTGCTTTATTGATCAAGAGACAGTG 58.459 40.000 14.54 0.00 0.00 3.66
711 4057 5.122869 TGCTTTATTGATCAAGAGACAGTGC 59.877 40.000 14.54 5.14 0.00 4.40
712 4058 5.726138 GCTTTATTGATCAAGAGACAGTGCG 60.726 44.000 14.54 0.00 0.00 5.34
752 4114 7.916552 ACGAATTTATACATGACTAAACCAGC 58.083 34.615 0.00 0.00 0.00 4.85
753 4115 7.063456 CGAATTTATACATGACTAAACCAGCG 58.937 38.462 0.00 2.47 0.00 5.18
754 4116 7.042992 CGAATTTATACATGACTAAACCAGCGA 60.043 37.037 0.00 0.00 0.00 4.93
758 4120 2.478894 ACATGACTAAACCAGCGAAACG 59.521 45.455 0.00 0.00 0.00 3.60
773 4135 2.802057 CGAAACGGACTCTCTGGTTTGT 60.802 50.000 0.00 0.00 31.73 2.83
775 4137 3.277142 AACGGACTCTCTGGTTTGTTT 57.723 42.857 0.00 0.00 0.00 2.83
845 4208 0.034863 AACCAAGTTCCACACCGTGT 60.035 50.000 0.00 0.00 0.00 4.49
900 4263 4.093952 CTCTGCGTGCTTTGGGCG 62.094 66.667 0.00 0.00 45.43 6.13
1098 4467 4.480031 GAGTTCCTCGGCGAGAAC 57.520 61.111 36.47 31.64 0.00 3.01
1184 4553 2.029844 GACTGACACTCGCCAAGGC 61.030 63.158 0.00 0.00 37.85 4.35
1186 4555 1.185618 ACTGACACTCGCCAAGGCTA 61.186 55.000 9.73 0.00 39.32 3.93
1195 4564 1.453928 GCCAAGGCTACCATCCACC 60.454 63.158 3.29 0.00 38.26 4.61
1196 4565 1.153168 CCAAGGCTACCATCCACCG 60.153 63.158 0.00 0.00 0.00 4.94
1214 4583 1.198867 CCGGCAATTCGTCACATGAAA 59.801 47.619 0.00 0.00 0.00 2.69
1217 4586 2.415893 GGCAATTCGTCACATGAAAGGG 60.416 50.000 0.00 0.00 0.00 3.95
1218 4587 2.228822 GCAATTCGTCACATGAAAGGGT 59.771 45.455 0.00 0.00 0.00 4.34
1219 4588 3.825308 CAATTCGTCACATGAAAGGGTG 58.175 45.455 0.00 0.00 36.36 4.61
1220 4589 1.234821 TTCGTCACATGAAAGGGTGC 58.765 50.000 0.00 0.00 35.04 5.01
1221 4590 0.948623 TCGTCACATGAAAGGGTGCG 60.949 55.000 0.00 0.00 36.55 5.34
1223 4592 1.234821 GTCACATGAAAGGGTGCGAA 58.765 50.000 0.00 0.00 35.04 4.70
1224 4593 1.812571 GTCACATGAAAGGGTGCGAAT 59.187 47.619 0.00 0.00 35.04 3.34
1277 4650 0.240145 GTTAAAACCAGGCACGGAGC 59.760 55.000 0.00 0.00 44.65 4.70
1386 4759 5.205821 TGAAATTCAGATTGCTGGATCCAT 58.794 37.500 16.63 0.00 39.51 3.41
1426 4799 5.053978 AGGTGAGGAGAAACTTTTGTCAT 57.946 39.130 1.74 0.00 32.58 3.06
1432 4805 6.016024 TGAGGAGAAACTTTTGTCATGATTGG 60.016 38.462 0.00 0.00 32.58 3.16
1467 4840 3.452474 CATGTTGCTCAGCCTAGTCTAC 58.548 50.000 0.00 0.00 0.00 2.59
1491 4864 6.813649 ACTTGTATGCGGCTATATGATGTTAG 59.186 38.462 0.00 0.00 0.00 2.34
1497 4870 4.306600 CGGCTATATGATGTTAGTGTGCA 58.693 43.478 0.00 0.00 0.00 4.57
1603 4982 2.393271 AAGAGACCAAATGCCTCGAG 57.607 50.000 5.13 5.13 32.52 4.04
1625 5004 2.151202 CGGTAACAGTTTGGTGATGCT 58.849 47.619 0.00 0.00 0.00 3.79
1708 5087 6.201806 CCTGATTTGTAACGGATTCTCTCATC 59.798 42.308 0.00 0.00 0.00 2.92
1828 5531 3.667960 GCGTGACATTTTGCTTCACCTAG 60.668 47.826 0.00 0.00 37.01 3.02
1994 5697 5.997746 CACTGGACCAATGTTTTCTTAGAGA 59.002 40.000 0.00 0.00 0.00 3.10
2206 5911 3.496331 AGTGGGGTTTTACATTCCTGTG 58.504 45.455 0.00 0.00 36.79 3.66
2330 6035 7.815840 TCCTTGTGATGATGTTGTTTAGAAA 57.184 32.000 0.00 0.00 0.00 2.52
2331 6036 7.648142 TCCTTGTGATGATGTTGTTTAGAAAC 58.352 34.615 0.00 0.00 39.33 2.78
2334 6039 8.854979 TTGTGATGATGTTGTTTAGAAACTTG 57.145 30.769 6.69 0.00 39.59 3.16
2336 6041 7.914871 TGTGATGATGTTGTTTAGAAACTTGTG 59.085 33.333 6.69 0.00 39.59 3.33
2338 6043 8.849168 TGATGATGTTGTTTAGAAACTTGTGAT 58.151 29.630 6.69 0.00 39.59 3.06
2340 6045 8.219546 TGATGTTGTTTAGAAACTTGTGATGA 57.780 30.769 6.69 0.00 39.59 2.92
2341 6046 8.849168 TGATGTTGTTTAGAAACTTGTGATGAT 58.151 29.630 6.69 0.00 39.59 2.45
2342 6047 9.121517 GATGTTGTTTAGAAACTTGTGATGATG 57.878 33.333 6.69 0.00 39.59 3.07
2343 6048 8.219546 TGTTGTTTAGAAACTTGTGATGATGA 57.780 30.769 6.69 0.00 39.59 2.92
2344 6049 8.849168 TGTTGTTTAGAAACTTGTGATGATGAT 58.151 29.630 6.69 0.00 39.59 2.45
2345 6050 9.121517 GTTGTTTAGAAACTTGTGATGATGATG 57.878 33.333 6.69 0.00 39.59 3.07
2346 6051 8.394971 TGTTTAGAAACTTGTGATGATGATGT 57.605 30.769 6.69 0.00 39.59 3.06
2347 6052 8.849168 TGTTTAGAAACTTGTGATGATGATGTT 58.151 29.630 6.69 0.00 39.59 2.71
2348 6053 9.121517 GTTTAGAAACTTGTGATGATGATGTTG 57.878 33.333 0.00 0.00 36.03 3.33
2349 6054 6.889301 AGAAACTTGTGATGATGATGTTGT 57.111 33.333 0.00 0.00 0.00 3.32
2352 6057 8.849168 AGAAACTTGTGATGATGATGTTGTTTA 58.151 29.630 0.00 0.00 0.00 2.01
2368 6073 5.417580 TGTTGTTTAGTTTGCTATGGATCCC 59.582 40.000 9.90 0.00 0.00 3.85
2413 6118 8.806429 TGCTATCTGTTGGATTTTTATTCAGA 57.194 30.769 0.00 0.00 35.98 3.27
2602 6307 2.655090 TTGTTGCTGATGGGACTTCA 57.345 45.000 0.00 0.00 0.00 3.02
2650 6355 2.090210 TCTGGGGAGCATGGAAGGTATA 60.090 50.000 0.00 0.00 0.00 1.47
2655 6360 4.018050 GGGGAGCATGGAAGGTATATTCAT 60.018 45.833 0.00 0.00 0.00 2.57
2680 6385 1.886542 AGAATCCAGTCCCGTTTTTGC 59.113 47.619 0.00 0.00 0.00 3.68
2694 6399 5.449999 CCCGTTTTTGCTTTACTTCTTCTGT 60.450 40.000 0.00 0.00 0.00 3.41
2696 6401 7.360361 CCGTTTTTGCTTTACTTCTTCTGTAT 58.640 34.615 0.00 0.00 0.00 2.29
2702 6407 9.502091 TTTGCTTTACTTCTTCTGTATGTATGT 57.498 29.630 0.00 0.00 0.00 2.29
2853 6558 1.450312 CAGCCGGTTCACCTCATCC 60.450 63.158 1.90 0.00 0.00 3.51
2934 6639 5.858159 TTGCAAAAACGTTATGTTCTTCG 57.142 34.783 0.00 0.00 40.84 3.79
2935 6640 4.911053 TGCAAAAACGTTATGTTCTTCGT 58.089 34.783 0.00 0.00 40.84 3.85
3013 6718 8.191446 TGCTTGTGTTATTTTGTAAACTGCTAA 58.809 29.630 0.00 0.00 0.00 3.09
3092 6799 7.743749 AGAAGTGGAAATATGCATGATCTACT 58.256 34.615 10.16 14.14 33.91 2.57
3096 6803 7.230108 AGTGGAAATATGCATGATCTACTTTGG 59.770 37.037 10.16 0.00 28.93 3.28
3111 6818 6.454795 TCTACTTTGGTGCCATTGATTTTTC 58.545 36.000 0.00 0.00 0.00 2.29
3112 6819 5.294734 ACTTTGGTGCCATTGATTTTTCT 57.705 34.783 0.00 0.00 0.00 2.52
3122 6830 6.070653 TGCCATTGATTTTTCTTAAGCCATCT 60.071 34.615 0.00 0.00 0.00 2.90
3123 6831 6.478016 GCCATTGATTTTTCTTAAGCCATCTC 59.522 38.462 0.00 0.00 0.00 2.75
3127 6835 5.948162 TGATTTTTCTTAAGCCATCTCAGCT 59.052 36.000 0.00 0.00 44.19 4.24
3128 6836 5.633830 TTTTTCTTAAGCCATCTCAGCTG 57.366 39.130 7.63 7.63 40.49 4.24
3185 6893 9.794719 AATTAGCTCTAAAAAGTGTACCTTTCT 57.205 29.630 9.02 0.52 42.62 2.52
3213 6928 4.792068 TCTGTTGAGGGAACACTTTTCAT 58.208 39.130 0.00 0.00 39.78 2.57
3251 6966 7.401484 GCTGAAGCACTTCTATATAGAACAC 57.599 40.000 19.23 12.10 40.14 3.32
3252 6967 6.980978 GCTGAAGCACTTCTATATAGAACACA 59.019 38.462 19.23 12.97 40.14 3.72
3253 6968 7.043059 GCTGAAGCACTTCTATATAGAACACAC 60.043 40.741 19.23 10.32 40.14 3.82
3254 6969 7.836842 TGAAGCACTTCTATATAGAACACACA 58.163 34.615 19.23 12.27 40.14 3.72
3268 6986 8.848474 ATAGAACACACACAGCTTATTTTACT 57.152 30.769 0.00 0.00 0.00 2.24
3300 7018 7.986085 ATATTCTATTGCAACTTATTCGGCT 57.014 32.000 0.00 0.00 0.00 5.52
3308 7026 5.239351 TGCAACTTATTCGGCTACTTGTAA 58.761 37.500 0.00 0.00 0.00 2.41
3315 7033 3.795623 TCGGCTACTTGTAACATCTCC 57.204 47.619 0.00 0.00 0.00 3.71
3321 7039 5.705905 GGCTACTTGTAACATCTCCTTTGTT 59.294 40.000 0.00 0.00 40.30 2.83
3361 7079 1.411977 CAGGTCCTAGTGGATGCAGAG 59.588 57.143 0.00 0.00 45.29 3.35
3370 7088 2.232452 AGTGGATGCAGAGTGTACTCAC 59.768 50.000 13.95 6.49 45.21 3.51
3469 7187 3.857157 AGAACTGGCAACCTACTTCAA 57.143 42.857 0.00 0.00 0.00 2.69
3486 7204 6.980416 ACTTCAACTTCAGGTACTACTTCT 57.020 37.500 0.00 0.00 36.02 2.85
3499 7217 8.304596 CAGGTACTACTTCTGTTCTTGATGTTA 58.695 37.037 0.00 0.00 36.02 2.41
3511 7229 4.334552 TCTTGATGTTAGCTTGAATGGCA 58.665 39.130 0.00 0.00 0.00 4.92
3515 7233 4.156556 TGATGTTAGCTTGAATGGCACTTC 59.843 41.667 0.00 0.00 0.00 3.01
3517 7235 4.081406 TGTTAGCTTGAATGGCACTTCAT 58.919 39.130 11.37 2.91 35.20 2.57
3528 7246 2.168313 TGGCACTTCATCGAGCAATCTA 59.832 45.455 0.00 0.00 0.00 1.98
3532 7250 6.071391 TGGCACTTCATCGAGCAATCTATATA 60.071 38.462 0.00 0.00 0.00 0.86
3533 7251 6.983307 GGCACTTCATCGAGCAATCTATATAT 59.017 38.462 0.00 0.00 0.00 0.86
3534 7252 7.168972 GGCACTTCATCGAGCAATCTATATATC 59.831 40.741 0.00 0.00 0.00 1.63
3535 7253 7.920151 GCACTTCATCGAGCAATCTATATATCT 59.080 37.037 0.00 0.00 0.00 1.98
3536 7254 9.800433 CACTTCATCGAGCAATCTATATATCTT 57.200 33.333 0.00 0.00 0.00 2.40
3568 7396 5.103940 ACCCCACAATTAGCTACATGAGAAT 60.104 40.000 11.02 0.00 0.00 2.40
3581 7409 9.053840 AGCTACATGAGAATCTTATGTTTGATG 57.946 33.333 22.71 11.19 40.36 3.07
3606 7434 9.300681 TGTTTACTGAATTTTGATGATCTTCCT 57.699 29.630 6.17 0.00 0.00 3.36
3610 7438 7.533426 ACTGAATTTTGATGATCTTCCTTTCG 58.467 34.615 6.17 4.39 0.00 3.46
3692 7520 4.036027 GTCTATAGTACTTGCAGGTGCGTA 59.964 45.833 12.40 8.15 45.83 4.42
3714 7542 7.465916 GCGTAATCTCTTCACATGCAAATCTAA 60.466 37.037 0.00 0.00 0.00 2.10
3752 7580 3.442977 CAGTAGTCTAGCCTTTACCGTGT 59.557 47.826 0.00 0.00 0.00 4.49
3769 7597 5.594724 CCGTGTTTAGAATTTCGGTACAA 57.405 39.130 0.00 0.00 34.38 2.41
3858 7686 4.154942 AGAATGTGGTTCAGCAATTCCTT 58.845 39.130 0.00 0.00 39.39 3.36
3883 7711 3.788227 AACATCCTTCAGCAGGTACAA 57.212 42.857 0.00 0.00 44.37 2.41
3949 7782 6.607019 TCACTTCTATAAAAGGGTTGTTGGT 58.393 36.000 0.00 0.00 31.35 3.67
3986 7826 2.547642 GCTGCTAAAGATCGATCCAGCT 60.548 50.000 30.29 15.13 40.58 4.24
4068 7908 4.569162 CGTCACAAACTAGTGGACTTTTCA 59.431 41.667 0.00 0.00 39.93 2.69
4080 7920 2.552315 GGACTTTTCATCGCCAAGTTCA 59.448 45.455 0.00 0.00 30.71 3.18
4107 7947 9.942850 TCAAGTTGTGATGTTCTTTATGAGATA 57.057 29.630 2.11 0.00 33.49 1.98
4151 7991 9.705290 GTTAATTTCATATGAAACCAGGTTGTT 57.295 29.630 28.59 19.23 45.55 2.83
4216 8057 0.468226 TGGTCGGAGTCTGCTTGTTT 59.532 50.000 0.00 0.00 0.00 2.83
4217 8058 1.689813 TGGTCGGAGTCTGCTTGTTTA 59.310 47.619 0.00 0.00 0.00 2.01
4219 8060 2.673368 GGTCGGAGTCTGCTTGTTTATG 59.327 50.000 0.00 0.00 0.00 1.90
4225 8074 5.479306 GGAGTCTGCTTGTTTATGTACTCA 58.521 41.667 0.00 0.00 35.04 3.41
4227 8076 6.091441 GGAGTCTGCTTGTTTATGTACTCAAG 59.909 42.308 0.00 0.00 39.83 3.02
4231 8080 8.129211 GTCTGCTTGTTTATGTACTCAAGTTTT 58.871 33.333 0.00 0.00 39.28 2.43
4260 8109 4.098044 GGCTTCTTGGTAAAATTAGCCTCC 59.902 45.833 0.00 0.00 42.55 4.30
4283 8132 4.015872 TGGCTTTAGGTGTGTAGAAAGG 57.984 45.455 0.00 0.00 31.03 3.11
4292 8141 3.547746 GTGTGTAGAAAGGGTTGTTGGA 58.452 45.455 0.00 0.00 0.00 3.53
4296 8145 5.105675 TGTGTAGAAAGGGTTGTTGGAAAAC 60.106 40.000 0.00 0.00 0.00 2.43
4303 8152 2.104170 GGTTGTTGGAAAACACTCCCA 58.896 47.619 0.00 0.00 34.22 4.37
4304 8153 2.698274 GGTTGTTGGAAAACACTCCCAT 59.302 45.455 0.00 0.00 34.22 4.00
4305 8154 3.243737 GGTTGTTGGAAAACACTCCCATC 60.244 47.826 0.00 0.00 34.22 3.51
4306 8155 3.593442 TGTTGGAAAACACTCCCATCT 57.407 42.857 0.00 0.00 34.22 2.90
4307 8156 4.715534 TGTTGGAAAACACTCCCATCTA 57.284 40.909 0.00 0.00 34.22 1.98
4309 8158 5.640147 TGTTGGAAAACACTCCCATCTATT 58.360 37.500 0.00 0.00 34.22 1.73
4310 8159 5.710099 TGTTGGAAAACACTCCCATCTATTC 59.290 40.000 0.00 0.00 34.22 1.75
4311 8160 5.779241 TGGAAAACACTCCCATCTATTCT 57.221 39.130 0.00 0.00 34.22 2.40
4312 8161 5.745227 TGGAAAACACTCCCATCTATTCTC 58.255 41.667 0.00 0.00 34.22 2.87
4314 8166 6.180472 GGAAAACACTCCCATCTATTCTCAA 58.820 40.000 0.00 0.00 0.00 3.02
4344 8197 9.533831 AATAAAAATCCCTGAGTCACAAATACT 57.466 29.630 0.00 0.00 0.00 2.12
4375 8228 6.027749 GCAAAAACGTCTTGTATTATGGGAG 58.972 40.000 10.89 0.00 0.00 4.30
4377 8230 4.417426 AACGTCTTGTATTATGGGAGGG 57.583 45.455 0.00 0.00 0.00 4.30
4380 8233 3.641906 CGTCTTGTATTATGGGAGGGAGT 59.358 47.826 0.00 0.00 0.00 3.85
4409 8267 8.463930 AGATGTTCTAACCTTTTTGTGAATCA 57.536 30.769 0.00 0.00 0.00 2.57
4452 8317 3.376859 TGTGTTTGTTCGCTCATTTCAGT 59.623 39.130 0.00 0.00 0.00 3.41
4455 8320 2.839486 TGTTCGCTCATTTCAGTCCT 57.161 45.000 0.00 0.00 0.00 3.85
4464 8329 5.233050 CGCTCATTTCAGTCCTTATGTAGTG 59.767 44.000 0.00 0.00 0.00 2.74
4465 8330 6.341316 GCTCATTTCAGTCCTTATGTAGTGA 58.659 40.000 0.00 0.00 0.00 3.41
4466 8331 6.989169 GCTCATTTCAGTCCTTATGTAGTGAT 59.011 38.462 0.00 0.00 0.00 3.06
4468 8333 8.311395 TCATTTCAGTCCTTATGTAGTGATCT 57.689 34.615 0.00 0.00 0.00 2.75
4469 8334 9.421399 TCATTTCAGTCCTTATGTAGTGATCTA 57.579 33.333 0.00 0.00 0.00 1.98
4474 8339 8.144478 TCAGTCCTTATGTAGTGATCTAAATGC 58.856 37.037 0.00 0.00 0.00 3.56
4476 8341 8.364142 AGTCCTTATGTAGTGATCTAAATGCTC 58.636 37.037 0.00 0.00 0.00 4.26
4477 8342 8.364142 GTCCTTATGTAGTGATCTAAATGCTCT 58.636 37.037 0.00 0.00 0.00 4.09
4478 8343 8.928448 TCCTTATGTAGTGATCTAAATGCTCTT 58.072 33.333 0.00 0.00 0.00 2.85
4552 8443 7.223582 CACAAAAATATGTTTGCACTACCACAA 59.776 33.333 16.82 0.00 41.33 3.33
4569 8460 9.681062 ACTACCACAAAATACAGCAATTACTAT 57.319 29.630 0.00 0.00 0.00 2.12
4602 8501 3.971702 GGCAAGGCCCTGAGGTGT 61.972 66.667 5.23 0.00 44.06 4.16
4618 8517 2.881352 GTCTCACGCCTACGCAGC 60.881 66.667 0.00 0.00 45.53 5.25
4619 8518 3.370231 TCTCACGCCTACGCAGCA 61.370 61.111 0.00 0.00 45.53 4.41
4621 8520 3.633094 CTCACGCCTACGCAGCACT 62.633 63.158 0.00 0.00 45.53 4.40
4622 8521 3.181967 CACGCCTACGCAGCACTC 61.182 66.667 0.00 0.00 45.53 3.51
4623 8522 4.778415 ACGCCTACGCAGCACTCG 62.778 66.667 0.00 0.00 45.53 4.18
4625 8524 4.436998 GCCTACGCAGCACTCGGT 62.437 66.667 0.00 0.00 34.03 4.69
4627 8526 2.507102 CTACGCAGCACTCGGTGG 60.507 66.667 6.23 0.00 41.09 4.61
4651 8550 4.020617 CGGCCTCCTTGCTGGTCA 62.021 66.667 0.00 0.00 37.07 4.02
4675 8574 1.757306 CTGACTCAAGGGTGCAGGT 59.243 57.895 0.00 0.00 0.00 4.00
4677 8576 1.347707 CTGACTCAAGGGTGCAGGTTA 59.652 52.381 0.00 0.00 0.00 2.85
4763 8680 3.056749 TGTTTTCTCCTTCTCGCTAGACC 60.057 47.826 0.00 0.00 0.00 3.85
4764 8681 2.509166 TTCTCCTTCTCGCTAGACCA 57.491 50.000 0.00 0.00 0.00 4.02
4839 9772 4.307443 ACATAGTGATCGATGCGAAGAA 57.693 40.909 0.54 0.00 39.99 2.52
4840 9773 4.876125 ACATAGTGATCGATGCGAAGAAT 58.124 39.130 0.54 0.00 39.99 2.40
4841 9774 4.683320 ACATAGTGATCGATGCGAAGAATG 59.317 41.667 0.54 0.15 39.99 2.67
4842 9775 2.477825 AGTGATCGATGCGAAGAATGG 58.522 47.619 0.54 0.00 39.99 3.16
4843 9776 2.101415 AGTGATCGATGCGAAGAATGGA 59.899 45.455 0.54 0.00 39.99 3.41
4844 9777 2.219674 GTGATCGATGCGAAGAATGGAC 59.780 50.000 0.54 0.00 39.99 4.02
4845 9778 1.453524 GATCGATGCGAAGAATGGACG 59.546 52.381 0.54 0.00 39.99 4.79
4846 9779 0.454196 TCGATGCGAAGAATGGACGA 59.546 50.000 0.00 0.00 31.06 4.20
4847 9780 0.848942 CGATGCGAAGAATGGACGAG 59.151 55.000 0.00 0.00 0.00 4.18
4848 9781 1.533965 CGATGCGAAGAATGGACGAGA 60.534 52.381 0.00 0.00 0.00 4.04
4849 9782 2.748605 GATGCGAAGAATGGACGAGAT 58.251 47.619 0.00 0.00 0.00 2.75
4850 9783 1.926561 TGCGAAGAATGGACGAGATG 58.073 50.000 0.00 0.00 0.00 2.90
4851 9784 1.212616 GCGAAGAATGGACGAGATGG 58.787 55.000 0.00 0.00 0.00 3.51
4852 9785 1.471676 GCGAAGAATGGACGAGATGGT 60.472 52.381 0.00 0.00 0.00 3.55
4853 9786 2.893637 CGAAGAATGGACGAGATGGTT 58.106 47.619 0.00 0.00 0.00 3.67
4854 9787 3.737047 GCGAAGAATGGACGAGATGGTTA 60.737 47.826 0.00 0.00 0.00 2.85
4855 9788 3.797256 CGAAGAATGGACGAGATGGTTAC 59.203 47.826 0.00 0.00 0.00 2.50
4856 9789 4.676986 CGAAGAATGGACGAGATGGTTACA 60.677 45.833 0.00 0.00 0.00 2.41
4857 9790 4.819105 AGAATGGACGAGATGGTTACAA 57.181 40.909 0.00 0.00 0.00 2.41
4858 9791 4.504858 AGAATGGACGAGATGGTTACAAC 58.495 43.478 0.00 0.00 0.00 3.32
4859 9792 3.973206 ATGGACGAGATGGTTACAACA 57.027 42.857 0.00 0.00 0.00 3.33
4860 9793 3.755112 TGGACGAGATGGTTACAACAA 57.245 42.857 0.00 0.00 0.00 2.83
4861 9794 4.280436 TGGACGAGATGGTTACAACAAT 57.720 40.909 0.00 0.00 0.00 2.71
4862 9795 5.408880 TGGACGAGATGGTTACAACAATA 57.591 39.130 0.00 0.00 0.00 1.90
4863 9796 5.984725 TGGACGAGATGGTTACAACAATAT 58.015 37.500 0.00 0.00 0.00 1.28
4864 9797 5.815222 TGGACGAGATGGTTACAACAATATG 59.185 40.000 0.00 0.00 0.00 1.78
4865 9798 5.236478 GGACGAGATGGTTACAACAATATGG 59.764 44.000 0.00 0.00 0.00 2.74
4866 9799 4.574828 ACGAGATGGTTACAACAATATGGC 59.425 41.667 0.00 0.00 0.00 4.40
4867 9800 4.574421 CGAGATGGTTACAACAATATGGCA 59.426 41.667 0.00 0.00 0.00 4.92
4868 9801 5.277490 CGAGATGGTTACAACAATATGGCAG 60.277 44.000 0.00 0.00 0.00 4.85
4869 9802 4.339247 AGATGGTTACAACAATATGGCAGC 59.661 41.667 0.00 0.00 0.00 5.25
4870 9803 3.425659 TGGTTACAACAATATGGCAGCA 58.574 40.909 0.00 0.00 0.00 4.41
4871 9804 3.829026 TGGTTACAACAATATGGCAGCAA 59.171 39.130 0.00 0.00 0.00 3.91
4872 9805 4.281941 TGGTTACAACAATATGGCAGCAAA 59.718 37.500 0.00 0.00 0.00 3.68
4873 9806 5.046735 TGGTTACAACAATATGGCAGCAAAT 60.047 36.000 0.00 0.00 0.00 2.32
4874 9807 5.519927 GGTTACAACAATATGGCAGCAAATC 59.480 40.000 0.00 0.00 0.00 2.17
4875 9808 4.127566 ACAACAATATGGCAGCAAATCC 57.872 40.909 0.00 0.00 0.00 3.01
4876 9809 3.117794 CAACAATATGGCAGCAAATCCG 58.882 45.455 0.00 0.00 0.00 4.18
4877 9810 2.378038 ACAATATGGCAGCAAATCCGT 58.622 42.857 0.00 0.00 0.00 4.69
4878 9811 2.760092 ACAATATGGCAGCAAATCCGTT 59.240 40.909 0.00 0.00 0.00 4.44
4879 9812 3.195396 ACAATATGGCAGCAAATCCGTTT 59.805 39.130 0.00 0.00 0.00 3.60
4880 9813 3.715628 ATATGGCAGCAAATCCGTTTC 57.284 42.857 0.00 0.00 0.00 2.78
4881 9814 0.532115 ATGGCAGCAAATCCGTTTCC 59.468 50.000 0.00 0.00 0.00 3.13
4882 9815 0.825425 TGGCAGCAAATCCGTTTCCA 60.825 50.000 0.00 0.00 0.00 3.53
4883 9816 0.316841 GGCAGCAAATCCGTTTCCAA 59.683 50.000 0.00 0.00 0.00 3.53
4884 9817 1.270041 GGCAGCAAATCCGTTTCCAAA 60.270 47.619 0.00 0.00 0.00 3.28
4885 9818 2.061028 GCAGCAAATCCGTTTCCAAAG 58.939 47.619 0.00 0.00 0.00 2.77
4886 9819 2.288152 GCAGCAAATCCGTTTCCAAAGA 60.288 45.455 0.00 0.00 0.00 2.52
4887 9820 3.798548 GCAGCAAATCCGTTTCCAAAGAA 60.799 43.478 0.00 0.00 0.00 2.52
4888 9821 4.367450 CAGCAAATCCGTTTCCAAAGAAA 58.633 39.130 0.00 0.00 39.70 2.52
4889 9822 4.445385 CAGCAAATCCGTTTCCAAAGAAAG 59.555 41.667 0.00 0.00 42.60 2.62
4890 9823 4.340950 AGCAAATCCGTTTCCAAAGAAAGA 59.659 37.500 0.00 0.00 42.60 2.52
4891 9824 5.047188 GCAAATCCGTTTCCAAAGAAAGAA 58.953 37.500 0.00 0.00 42.60 2.52
4892 9825 5.522097 GCAAATCCGTTTCCAAAGAAAGAAA 59.478 36.000 0.00 0.00 42.60 2.52
4893 9826 6.292328 GCAAATCCGTTTCCAAAGAAAGAAAG 60.292 38.462 0.00 0.00 42.60 2.62
4894 9827 6.709018 AATCCGTTTCCAAAGAAAGAAAGA 57.291 33.333 0.00 0.00 42.60 2.52
4895 9828 6.709018 ATCCGTTTCCAAAGAAAGAAAGAA 57.291 33.333 0.00 0.00 42.60 2.52
4896 9829 6.518208 TCCGTTTCCAAAGAAAGAAAGAAA 57.482 33.333 0.00 0.00 42.60 2.52
4897 9830 7.107639 TCCGTTTCCAAAGAAAGAAAGAAAT 57.892 32.000 0.00 0.00 42.60 2.17
4898 9831 6.978080 TCCGTTTCCAAAGAAAGAAAGAAATG 59.022 34.615 0.00 0.00 42.60 2.32
4899 9832 6.756542 CCGTTTCCAAAGAAAGAAAGAAATGT 59.243 34.615 0.00 0.00 42.60 2.71
4900 9833 7.043391 CCGTTTCCAAAGAAAGAAAGAAATGTC 60.043 37.037 0.00 0.00 42.60 3.06
4901 9834 7.487829 CGTTTCCAAAGAAAGAAAGAAATGTCA 59.512 33.333 0.00 0.00 42.60 3.58
4902 9835 8.811378 GTTTCCAAAGAAAGAAAGAAATGTCAG 58.189 33.333 0.00 0.00 42.60 3.51
4903 9836 6.507023 TCCAAAGAAAGAAAGAAATGTCAGC 58.493 36.000 0.00 0.00 0.00 4.26
4904 9837 6.096705 TCCAAAGAAAGAAAGAAATGTCAGCA 59.903 34.615 0.00 0.00 0.00 4.41
4905 9838 6.420008 CCAAAGAAAGAAAGAAATGTCAGCAG 59.580 38.462 0.00 0.00 0.00 4.24
4906 9839 6.949352 AAGAAAGAAAGAAATGTCAGCAGA 57.051 33.333 0.00 0.00 0.00 4.26
4907 9840 7.521871 AAGAAAGAAAGAAATGTCAGCAGAT 57.478 32.000 0.00 0.00 0.00 2.90
4908 9841 6.910995 AGAAAGAAAGAAATGTCAGCAGATG 58.089 36.000 0.00 0.00 0.00 2.90
4909 9842 6.713903 AGAAAGAAAGAAATGTCAGCAGATGA 59.286 34.615 0.00 0.00 34.79 2.92
4910 9843 7.393796 AGAAAGAAAGAAATGTCAGCAGATGAT 59.606 33.333 0.00 0.00 40.92 2.45
4911 9844 6.438259 AGAAAGAAATGTCAGCAGATGATG 57.562 37.500 0.00 0.00 40.92 3.07
4924 9857 4.948608 CAGATGATGCTATGGATGAAGC 57.051 45.455 0.00 0.00 39.25 3.86
4925 9858 4.580868 CAGATGATGCTATGGATGAAGCT 58.419 43.478 0.00 0.00 39.53 3.74
4926 9859 4.632251 CAGATGATGCTATGGATGAAGCTC 59.368 45.833 0.00 0.00 39.53 4.09
4927 9860 4.286291 AGATGATGCTATGGATGAAGCTCA 59.714 41.667 0.00 0.00 39.53 4.26
4928 9861 3.736720 TGATGCTATGGATGAAGCTCAC 58.263 45.455 0.00 0.00 39.53 3.51
4929 9862 3.135167 TGATGCTATGGATGAAGCTCACA 59.865 43.478 0.00 0.00 39.53 3.58
4930 9863 3.632643 TGCTATGGATGAAGCTCACAA 57.367 42.857 0.00 0.00 39.53 3.33
4931 9864 3.273434 TGCTATGGATGAAGCTCACAAC 58.727 45.455 0.00 0.00 39.53 3.32
4932 9865 3.273434 GCTATGGATGAAGCTCACAACA 58.727 45.455 0.00 0.00 35.80 3.33
4933 9866 3.311871 GCTATGGATGAAGCTCACAACAG 59.688 47.826 0.00 0.00 35.80 3.16
4934 9867 1.527034 TGGATGAAGCTCACAACAGC 58.473 50.000 0.00 0.00 39.99 4.40
4941 9874 2.324215 GCTCACAACAGCTTCTGCA 58.676 52.632 0.00 0.00 42.74 4.41
4942 9875 0.664761 GCTCACAACAGCTTCTGCAA 59.335 50.000 0.00 0.00 42.74 4.08
4943 9876 1.598924 GCTCACAACAGCTTCTGCAAC 60.599 52.381 0.00 0.00 42.74 4.17
4944 9877 1.672363 CTCACAACAGCTTCTGCAACA 59.328 47.619 0.00 0.00 42.74 3.33
4945 9878 1.672363 TCACAACAGCTTCTGCAACAG 59.328 47.619 0.00 0.00 42.74 3.16
4946 9879 1.672363 CACAACAGCTTCTGCAACAGA 59.328 47.619 0.00 0.00 42.74 3.41
4947 9880 2.097954 CACAACAGCTTCTGCAACAGAA 59.902 45.455 9.51 9.51 46.50 3.02
4960 9893 8.571461 TTCTGCAACAGAAGATGATTATTTCT 57.429 30.769 5.94 0.00 44.27 2.52
4961 9894 8.571461 TCTGCAACAGAAGATGATTATTTCTT 57.429 30.769 0.00 0.00 37.57 2.52
4962 9895 9.671279 TCTGCAACAGAAGATGATTATTTCTTA 57.329 29.630 0.00 0.00 37.57 2.10
4963 9896 9.932699 CTGCAACAGAAGATGATTATTTCTTAG 57.067 33.333 0.00 0.00 32.46 2.18
4964 9897 8.400947 TGCAACAGAAGATGATTATTTCTTAGC 58.599 33.333 0.00 0.00 32.46 3.09
4965 9898 7.859875 GCAACAGAAGATGATTATTTCTTAGCC 59.140 37.037 0.00 0.00 32.46 3.93
4966 9899 9.118300 CAACAGAAGATGATTATTTCTTAGCCT 57.882 33.333 0.00 0.00 32.46 4.58
4967 9900 8.674263 ACAGAAGATGATTATTTCTTAGCCTG 57.326 34.615 0.00 0.00 32.46 4.85
4968 9901 7.228308 ACAGAAGATGATTATTTCTTAGCCTGC 59.772 37.037 0.00 0.00 32.46 4.85
4969 9902 7.228108 CAGAAGATGATTATTTCTTAGCCTGCA 59.772 37.037 0.00 0.00 32.46 4.41
4970 9903 7.444792 AGAAGATGATTATTTCTTAGCCTGCAG 59.555 37.037 6.78 6.78 32.46 4.41
4971 9904 5.472820 AGATGATTATTTCTTAGCCTGCAGC 59.527 40.000 8.66 3.91 44.25 5.25
4980 9913 2.417097 GCCTGCAGCAACCGTTTT 59.583 55.556 8.66 0.00 42.97 2.43
4981 9914 1.950630 GCCTGCAGCAACCGTTTTG 60.951 57.895 8.66 0.00 42.97 2.44
4982 9915 1.437160 CCTGCAGCAACCGTTTTGT 59.563 52.632 8.66 0.00 0.00 2.83
4983 9916 0.594796 CCTGCAGCAACCGTTTTGTC 60.595 55.000 8.66 0.00 0.00 3.18
4984 9917 0.100325 CTGCAGCAACCGTTTTGTCA 59.900 50.000 0.00 0.00 0.00 3.58
4985 9918 0.743688 TGCAGCAACCGTTTTGTCAT 59.256 45.000 0.00 0.00 0.00 3.06
4986 9919 1.130955 GCAGCAACCGTTTTGTCATG 58.869 50.000 0.00 0.00 0.00 3.07
4987 9920 1.769733 CAGCAACCGTTTTGTCATGG 58.230 50.000 0.00 0.00 0.00 3.66
4988 9921 1.066908 CAGCAACCGTTTTGTCATGGT 59.933 47.619 0.00 0.00 37.70 3.55
4989 9922 1.754226 AGCAACCGTTTTGTCATGGTT 59.246 42.857 0.00 0.00 45.48 3.67
4991 9924 2.217429 AACCGTTTTGTCATGGTTGC 57.783 45.000 0.00 0.00 43.33 4.17
4992 9925 0.387565 ACCGTTTTGTCATGGTTGCC 59.612 50.000 0.00 0.00 31.33 4.52
4993 9926 0.319469 CCGTTTTGTCATGGTTGCCC 60.319 55.000 0.00 0.00 0.00 5.36
4994 9927 0.662970 CGTTTTGTCATGGTTGCCCG 60.663 55.000 0.00 0.00 0.00 6.13
4995 9928 0.943835 GTTTTGTCATGGTTGCCCGC 60.944 55.000 0.00 0.00 0.00 6.13
4996 9929 2.093537 TTTTGTCATGGTTGCCCGCC 62.094 55.000 0.00 0.00 0.00 6.13
4997 9930 3.799286 TTGTCATGGTTGCCCGCCA 62.799 57.895 0.00 0.00 40.68 5.69
4998 9931 3.747976 GTCATGGTTGCCCGCCAC 61.748 66.667 0.00 0.00 39.03 5.01
4999 9932 4.277009 TCATGGTTGCCCGCCACA 62.277 61.111 0.00 0.00 39.03 4.17
5000 9933 3.069946 CATGGTTGCCCGCCACAT 61.070 61.111 0.00 0.00 39.03 3.21
5001 9934 3.069946 ATGGTTGCCCGCCACATG 61.070 61.111 0.00 0.00 39.03 3.21
5009 9942 2.124362 CCGCCACATGCCCACATA 60.124 61.111 0.00 0.00 33.67 2.29
5010 9943 1.529010 CCGCCACATGCCCACATAT 60.529 57.895 0.00 0.00 33.67 1.78
5011 9944 0.250684 CCGCCACATGCCCACATATA 60.251 55.000 0.00 0.00 33.67 0.86
5012 9945 1.614051 CCGCCACATGCCCACATATAT 60.614 52.381 0.00 0.00 33.67 0.86
5013 9946 2.355615 CCGCCACATGCCCACATATATA 60.356 50.000 0.00 0.00 33.67 0.86
5014 9947 3.544684 CGCCACATGCCCACATATATAT 58.455 45.455 0.00 0.00 33.67 0.86
5015 9948 3.561310 CGCCACATGCCCACATATATATC 59.439 47.826 0.00 0.00 33.67 1.63
5016 9949 4.684214 CGCCACATGCCCACATATATATCT 60.684 45.833 0.00 0.00 33.67 1.98
5017 9950 5.453198 CGCCACATGCCCACATATATATCTA 60.453 44.000 0.00 0.00 33.67 1.98
5018 9951 5.760253 GCCACATGCCCACATATATATCTAC 59.240 44.000 0.00 0.00 33.67 2.59
5019 9952 6.408548 GCCACATGCCCACATATATATCTACT 60.409 42.308 0.00 0.00 33.67 2.57
5020 9953 7.212976 CCACATGCCCACATATATATCTACTC 58.787 42.308 0.00 0.00 33.67 2.59
5021 9954 7.147672 CCACATGCCCACATATATATCTACTCA 60.148 40.741 0.00 0.00 33.67 3.41
5022 9955 8.260114 CACATGCCCACATATATATCTACTCAA 58.740 37.037 0.00 0.00 33.67 3.02
5023 9956 8.996655 ACATGCCCACATATATATCTACTCAAT 58.003 33.333 0.00 0.00 33.67 2.57
5026 9959 9.715119 TGCCCACATATATATCTACTCAATAGT 57.285 33.333 0.00 0.00 39.91 2.12
5041 9974 5.159273 TCAATAGTTGAGTACACCATGCA 57.841 39.130 0.00 0.00 34.08 3.96
5042 9975 5.744171 TCAATAGTTGAGTACACCATGCAT 58.256 37.500 0.00 0.00 34.08 3.96
5043 9976 5.817296 TCAATAGTTGAGTACACCATGCATC 59.183 40.000 0.00 0.00 34.08 3.91
5044 9977 2.991250 AGTTGAGTACACCATGCATCC 58.009 47.619 0.00 0.00 0.00 3.51
5045 9978 2.305635 AGTTGAGTACACCATGCATCCA 59.694 45.455 0.00 0.00 0.00 3.41
5046 9979 3.054139 AGTTGAGTACACCATGCATCCAT 60.054 43.478 0.00 0.00 0.00 3.41
5047 9980 3.198409 TGAGTACACCATGCATCCATC 57.802 47.619 0.00 0.00 0.00 3.51
5048 9981 2.773661 TGAGTACACCATGCATCCATCT 59.226 45.455 0.00 0.00 0.00 2.90
5049 9982 3.966665 TGAGTACACCATGCATCCATCTA 59.033 43.478 0.00 0.00 0.00 1.98
5050 9983 4.039609 TGAGTACACCATGCATCCATCTAG 59.960 45.833 0.00 0.00 0.00 2.43
5051 9984 3.969976 AGTACACCATGCATCCATCTAGT 59.030 43.478 0.00 0.00 0.00 2.57
5052 9985 3.482156 ACACCATGCATCCATCTAGTC 57.518 47.619 0.00 0.00 0.00 2.59
5053 9986 2.773661 ACACCATGCATCCATCTAGTCA 59.226 45.455 0.00 0.00 0.00 3.41
5054 9987 3.181457 ACACCATGCATCCATCTAGTCAG 60.181 47.826 0.00 0.00 0.00 3.51
5055 9988 3.044156 ACCATGCATCCATCTAGTCAGT 58.956 45.455 0.00 0.00 0.00 3.41
5056 9989 3.181457 ACCATGCATCCATCTAGTCAGTG 60.181 47.826 0.00 0.00 0.00 3.66
5057 9990 3.400255 CATGCATCCATCTAGTCAGTGG 58.600 50.000 0.00 0.00 0.00 4.00
5058 9991 1.139654 TGCATCCATCTAGTCAGTGGC 59.860 52.381 0.00 0.00 33.01 5.01
5059 9992 1.871408 GCATCCATCTAGTCAGTGGCG 60.871 57.143 0.00 0.00 33.01 5.69
5060 9993 1.043816 ATCCATCTAGTCAGTGGCGG 58.956 55.000 0.00 0.00 33.01 6.13
5061 9994 0.033503 TCCATCTAGTCAGTGGCGGA 60.034 55.000 0.00 0.00 33.01 5.54
5062 9995 0.387202 CCATCTAGTCAGTGGCGGAG 59.613 60.000 0.00 0.00 0.00 4.63
5063 9996 1.393603 CATCTAGTCAGTGGCGGAGA 58.606 55.000 5.06 5.06 0.00 3.71
5064 9997 1.066303 CATCTAGTCAGTGGCGGAGAC 59.934 57.143 4.74 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 3.772853 TATGATGTGCCCGCCCTGC 62.773 63.158 0.00 0.00 0.00 4.85
115 116 5.396772 CCTGATGGATTTCTACAGCACCTTA 60.397 44.000 0.00 0.00 34.57 2.69
116 117 4.521146 CTGATGGATTTCTACAGCACCTT 58.479 43.478 0.00 0.00 0.00 3.50
117 118 3.118112 CCTGATGGATTTCTACAGCACCT 60.118 47.826 0.00 0.00 34.57 4.00
118 119 3.209410 CCTGATGGATTTCTACAGCACC 58.791 50.000 0.00 0.00 34.57 5.01
119 120 3.624861 CACCTGATGGATTTCTACAGCAC 59.375 47.826 0.00 0.00 37.04 4.40
120 121 3.877559 CACCTGATGGATTTCTACAGCA 58.122 45.455 0.00 0.00 37.04 4.41
121 122 2.615912 GCACCTGATGGATTTCTACAGC 59.384 50.000 0.00 0.00 37.04 4.40
122 123 4.125703 GAGCACCTGATGGATTTCTACAG 58.874 47.826 0.00 0.00 37.04 2.74
123 124 3.118261 GGAGCACCTGATGGATTTCTACA 60.118 47.826 0.00 0.00 37.04 2.74
124 125 3.471680 GGAGCACCTGATGGATTTCTAC 58.528 50.000 0.00 0.00 37.04 2.59
125 126 2.439507 GGGAGCACCTGATGGATTTCTA 59.560 50.000 0.00 0.00 37.04 2.10
161 162 7.880059 AAGTAACGAAGTATACCAACAGAAC 57.120 36.000 0.00 0.00 45.00 3.01
408 738 3.125316 GCCAAGAAATATATCCGCCTTCG 59.875 47.826 0.00 0.00 0.00 3.79
429 3738 1.079503 AGTTCAATTTCCTCGCGAGC 58.920 50.000 30.49 13.20 0.00 5.03
430 3739 2.069273 ACAGTTCAATTTCCTCGCGAG 58.931 47.619 29.06 29.06 0.00 5.03
433 3742 2.095212 GGGAACAGTTCAATTTCCTCGC 60.095 50.000 15.36 0.00 39.11 5.03
434 3743 3.189287 CAGGGAACAGTTCAATTTCCTCG 59.811 47.826 15.36 3.91 39.11 4.63
454 3763 6.638468 GCAAGAATTTCACCTGAACTTTACAG 59.362 38.462 0.00 0.00 33.13 2.74
461 3770 3.057245 GGAGGCAAGAATTTCACCTGAAC 60.057 47.826 9.57 0.00 33.13 3.18
465 3774 2.376518 TCTGGAGGCAAGAATTTCACCT 59.623 45.455 5.60 5.60 0.00 4.00
495 3804 2.092103 ACAAGTAACACCACCACCACAT 60.092 45.455 0.00 0.00 0.00 3.21
503 3814 0.533308 TCCCGCACAAGTAACACCAC 60.533 55.000 0.00 0.00 0.00 4.16
506 3817 1.589803 ACTTCCCGCACAAGTAACAC 58.410 50.000 0.00 0.00 32.08 3.32
528 3840 1.090052 GCGGGCAAGTACATCTCCAC 61.090 60.000 0.00 0.00 0.00 4.02
533 3845 1.819632 CCTGGCGGGCAAGTACATC 60.820 63.158 5.54 0.00 0.00 3.06
545 3857 2.042259 ACATCATGTGTGCCTGGCG 61.042 57.895 14.98 0.00 40.28 5.69
546 3858 4.007457 ACATCATGTGTGCCTGGC 57.993 55.556 12.87 12.87 40.28 4.85
564 3876 3.401182 TGGCCAAAATTTCTGCATGAAC 58.599 40.909 0.61 0.00 33.88 3.18
600 3912 0.508213 GCAACGCAAACAATTCCTGC 59.492 50.000 0.00 0.00 0.00 4.85
602 3914 1.000274 GAGGCAACGCAAACAATTCCT 60.000 47.619 0.00 0.00 46.39 3.36
603 3915 1.000274 AGAGGCAACGCAAACAATTCC 60.000 47.619 0.00 0.00 46.39 3.01
604 3916 2.053627 CAGAGGCAACGCAAACAATTC 58.946 47.619 0.00 0.00 46.39 2.17
609 3926 1.008538 CACCAGAGGCAACGCAAAC 60.009 57.895 0.00 0.00 46.39 2.93
625 3942 4.154737 TGAATTATCTTGAGCAGCACACAC 59.845 41.667 0.00 0.00 0.00 3.82
648 3994 7.521871 AAAGAAGAGACAAATCAGATTGCTT 57.478 32.000 0.00 0.00 33.52 3.91
649 3995 7.521871 AAAAGAAGAGACAAATCAGATTGCT 57.478 32.000 0.00 0.00 33.52 3.91
673 4019 9.935682 GATCAATAAAGCACGATATTTCTCAAA 57.064 29.630 0.00 0.00 0.00 2.69
674 4020 9.108284 TGATCAATAAAGCACGATATTTCTCAA 57.892 29.630 0.00 0.00 0.00 3.02
675 4021 8.661352 TGATCAATAAAGCACGATATTTCTCA 57.339 30.769 0.00 0.00 0.00 3.27
687 4033 5.122869 GCACTGTCTCTTGATCAATAAAGCA 59.877 40.000 8.96 8.46 0.00 3.91
690 4036 4.631377 CCGCACTGTCTCTTGATCAATAAA 59.369 41.667 8.96 0.00 0.00 1.40
707 4053 2.809601 GTCGAATGTCGCCGCACT 60.810 61.111 0.00 0.00 40.21 4.40
708 4054 2.165362 TTTGTCGAATGTCGCCGCAC 62.165 55.000 0.00 0.00 40.21 5.34
709 4055 1.956678 TTTGTCGAATGTCGCCGCA 60.957 52.632 0.00 0.00 40.21 5.69
710 4056 1.509162 GTTTGTCGAATGTCGCCGC 60.509 57.895 0.00 0.00 40.21 6.53
711 4057 1.225368 CGTTTGTCGAATGTCGCCG 60.225 57.895 0.00 0.00 40.21 6.46
712 4058 2.146954 TCGTTTGTCGAATGTCGCC 58.853 52.632 0.00 0.00 45.98 5.54
729 4075 8.138365 TCGCTGGTTTAGTCATGTATAAATTC 57.862 34.615 7.89 5.65 0.00 2.17
734 4080 5.517411 CGTTTCGCTGGTTTAGTCATGTATA 59.483 40.000 0.00 0.00 0.00 1.47
735 4081 4.328983 CGTTTCGCTGGTTTAGTCATGTAT 59.671 41.667 0.00 0.00 0.00 2.29
748 4110 0.734253 CAGAGAGTCCGTTTCGCTGG 60.734 60.000 4.61 0.00 38.37 4.85
750 4112 1.179814 ACCAGAGAGTCCGTTTCGCT 61.180 55.000 0.00 0.00 0.00 4.93
751 4113 0.319641 AACCAGAGAGTCCGTTTCGC 60.320 55.000 0.00 0.00 0.00 4.70
752 4114 1.792949 CAAACCAGAGAGTCCGTTTCG 59.207 52.381 0.00 0.00 0.00 3.46
753 4115 2.835027 ACAAACCAGAGAGTCCGTTTC 58.165 47.619 0.00 0.00 0.00 2.78
754 4116 3.277142 AACAAACCAGAGAGTCCGTTT 57.723 42.857 0.00 0.00 0.00 3.60
758 4120 3.809905 ACTCAAACAAACCAGAGAGTCC 58.190 45.455 0.00 0.00 31.19 3.85
773 4135 1.405105 GCAAAGCACACTGGACTCAAA 59.595 47.619 0.00 0.00 0.00 2.69
775 4137 1.159713 CGCAAAGCACACTGGACTCA 61.160 55.000 0.00 0.00 0.00 3.41
801 4164 2.173356 CTGGGCCCTATGTTTCAGATCA 59.827 50.000 25.70 0.00 0.00 2.92
930 4293 4.436998 GGTCTCCGGCAGTGGTCG 62.437 72.222 0.00 0.00 43.08 4.79
931 4294 2.997897 AGGTCTCCGGCAGTGGTC 60.998 66.667 0.00 0.00 0.00 4.02
932 4295 2.997897 GAGGTCTCCGGCAGTGGT 60.998 66.667 0.00 0.00 0.00 4.16
933 4296 4.135153 CGAGGTCTCCGGCAGTGG 62.135 72.222 0.00 0.00 0.00 4.00
934 4297 4.803426 GCGAGGTCTCCGGCAGTG 62.803 72.222 0.00 0.00 0.00 3.66
1166 4535 2.029844 GCCTTGGCGAGTGTCAGTC 61.030 63.158 0.12 0.00 0.00 3.51
1167 4536 1.185618 TAGCCTTGGCGAGTGTCAGT 61.186 55.000 5.95 0.00 0.00 3.41
1168 4537 0.737715 GTAGCCTTGGCGAGTGTCAG 60.738 60.000 5.95 0.00 0.00 3.51
1169 4538 1.292223 GTAGCCTTGGCGAGTGTCA 59.708 57.895 5.95 0.00 0.00 3.58
1170 4539 1.448013 GGTAGCCTTGGCGAGTGTC 60.448 63.158 5.95 0.00 0.00 3.67
1184 4553 1.308998 GAATTGCCGGTGGATGGTAG 58.691 55.000 1.90 0.00 0.00 3.18
1186 4555 1.748879 CGAATTGCCGGTGGATGGT 60.749 57.895 1.90 0.00 0.00 3.55
1195 4564 2.508867 CTTTCATGTGACGAATTGCCG 58.491 47.619 0.00 0.00 0.00 5.69
1196 4565 2.415893 CCCTTTCATGTGACGAATTGCC 60.416 50.000 0.00 0.00 0.00 4.52
1214 4583 0.461961 GCTACTCTCATTCGCACCCT 59.538 55.000 0.00 0.00 0.00 4.34
1217 4586 1.135139 TCAGGCTACTCTCATTCGCAC 59.865 52.381 0.00 0.00 0.00 5.34
1218 4587 1.135139 GTCAGGCTACTCTCATTCGCA 59.865 52.381 0.00 0.00 0.00 5.10
1219 4588 1.407258 AGTCAGGCTACTCTCATTCGC 59.593 52.381 0.00 0.00 0.00 4.70
1220 4589 3.119316 ACAAGTCAGGCTACTCTCATTCG 60.119 47.826 0.00 0.00 0.00 3.34
1221 4590 4.464069 ACAAGTCAGGCTACTCTCATTC 57.536 45.455 0.00 0.00 0.00 2.67
1223 4592 4.530161 AGAAACAAGTCAGGCTACTCTCAT 59.470 41.667 0.00 0.00 0.00 2.90
1224 4593 3.898123 AGAAACAAGTCAGGCTACTCTCA 59.102 43.478 0.00 0.00 0.00 3.27
1277 4650 0.914644 ATCTCTGTCACCACCATGGG 59.085 55.000 18.09 4.89 43.37 4.00
1281 4654 1.627864 TTCGATCTCTGTCACCACCA 58.372 50.000 0.00 0.00 0.00 4.17
1282 4655 2.611518 CTTTCGATCTCTGTCACCACC 58.388 52.381 0.00 0.00 0.00 4.61
1386 4759 1.064463 CCTTCCCTTGCTGATAAGCCA 60.064 52.381 0.00 0.00 0.00 4.75
1426 4799 2.238521 GGGTCAGCTTCAAACCAATCA 58.761 47.619 6.66 0.00 34.62 2.57
1432 4805 2.863704 GCAACATGGGTCAGCTTCAAAC 60.864 50.000 0.00 0.00 0.00 2.93
1467 4840 6.813649 ACTAACATCATATAGCCGCATACAAG 59.186 38.462 0.00 0.00 0.00 3.16
1491 4864 8.741101 TGACAAAAATCTAATAACATGCACAC 57.259 30.769 0.00 0.00 0.00 3.82
1603 4982 1.199097 CATCACCAAACTGTTACCGGC 59.801 52.381 0.00 0.00 0.00 6.13
1625 5004 8.100791 AGCTTCAGTTTAACTTGTACCATGATA 58.899 33.333 0.00 0.00 0.00 2.15
1643 5022 4.008330 CCATGAGATTGAACAGCTTCAGT 58.992 43.478 0.00 0.00 37.70 3.41
1680 5059 5.046591 AGAGAATCCGTTACAAATCAGGTGA 60.047 40.000 0.00 0.00 33.66 4.02
1828 5531 8.992835 AGATCTGAAATGTTTTTAAAGATGCC 57.007 30.769 0.00 0.00 32.49 4.40
1994 5697 7.494625 CGTTTATGATTGTAGGGTAGACATTGT 59.505 37.037 0.00 0.00 0.00 2.71
2206 5911 1.303091 CCGAACCGGTCCATCAAACC 61.303 60.000 8.04 0.00 42.73 3.27
2328 6033 8.632679 ACTAAACAACATCATCATCACAAGTTT 58.367 29.630 0.00 0.00 0.00 2.66
2329 6034 8.169977 ACTAAACAACATCATCATCACAAGTT 57.830 30.769 0.00 0.00 0.00 2.66
2330 6035 7.750229 ACTAAACAACATCATCATCACAAGT 57.250 32.000 0.00 0.00 0.00 3.16
2331 6036 8.908678 CAAACTAAACAACATCATCATCACAAG 58.091 33.333 0.00 0.00 0.00 3.16
2334 6039 7.086376 AGCAAACTAAACAACATCATCATCAC 58.914 34.615 0.00 0.00 0.00 3.06
2336 6041 9.229784 CATAGCAAACTAAACAACATCATCATC 57.770 33.333 0.00 0.00 30.45 2.92
2338 6043 7.392953 TCCATAGCAAACTAAACAACATCATCA 59.607 33.333 0.00 0.00 30.45 3.07
2340 6045 7.701539 TCCATAGCAAACTAAACAACATCAT 57.298 32.000 0.00 0.00 30.45 2.45
2341 6046 7.148086 GGATCCATAGCAAACTAAACAACATCA 60.148 37.037 6.95 0.00 30.45 3.07
2342 6047 7.196331 GGATCCATAGCAAACTAAACAACATC 58.804 38.462 6.95 0.00 30.45 3.06
2343 6048 6.096846 GGGATCCATAGCAAACTAAACAACAT 59.903 38.462 15.23 0.00 30.45 2.71
2344 6049 5.417580 GGGATCCATAGCAAACTAAACAACA 59.582 40.000 15.23 0.00 30.45 3.33
2345 6050 5.448632 CGGGATCCATAGCAAACTAAACAAC 60.449 44.000 15.23 0.00 30.45 3.32
2346 6051 4.638421 CGGGATCCATAGCAAACTAAACAA 59.362 41.667 15.23 0.00 30.45 2.83
2347 6052 4.196193 CGGGATCCATAGCAAACTAAACA 58.804 43.478 15.23 0.00 30.45 2.83
2348 6053 4.196971 ACGGGATCCATAGCAAACTAAAC 58.803 43.478 15.23 0.00 30.45 2.01
2349 6054 4.497291 ACGGGATCCATAGCAAACTAAA 57.503 40.909 15.23 0.00 30.45 1.85
2352 6057 2.224305 GCTACGGGATCCATAGCAAACT 60.224 50.000 29.38 4.96 40.87 2.66
2368 6073 3.502920 CAGAGGTCTAACACAAGCTACG 58.497 50.000 0.00 0.00 0.00 3.51
2602 6307 5.127682 GGAGTTCACAGGCAATATGGAAAAT 59.872 40.000 0.00 0.00 0.00 1.82
2650 6355 4.444022 CGGGACTGGATTCTTCTGATGAAT 60.444 45.833 16.04 16.04 36.91 2.57
2655 6360 1.938585 ACGGGACTGGATTCTTCTGA 58.061 50.000 0.00 0.00 0.00 3.27
2696 6401 9.317936 CTCAAGACAAGCTAAATCATACATACA 57.682 33.333 0.00 0.00 0.00 2.29
2702 6407 8.886719 CATGAACTCAAGACAAGCTAAATCATA 58.113 33.333 0.00 0.00 0.00 2.15
2717 6422 4.274214 TGTGACAAAGAGCATGAACTCAAG 59.726 41.667 0.00 0.00 39.26 3.02
2853 6558 1.806542 CAGGTTCGGAAGTTGATGGTG 59.193 52.381 0.00 0.00 0.00 4.17
3013 6718 8.086522 ACTTGTGTAGTTCAGTAACGATAACAT 58.913 33.333 0.00 0.00 40.73 2.71
3092 6799 6.204495 GCTTAAGAAAAATCAATGGCACCAAA 59.796 34.615 6.67 0.00 0.00 3.28
3096 6803 5.237048 TGGCTTAAGAAAAATCAATGGCAC 58.763 37.500 6.67 0.00 0.00 5.01
3111 6818 3.456280 GAGTCAGCTGAGATGGCTTAAG 58.544 50.000 18.89 0.00 38.03 1.85
3112 6819 2.169352 GGAGTCAGCTGAGATGGCTTAA 59.831 50.000 18.89 0.00 38.03 1.85
3122 6830 2.529632 ACTACATGTGGAGTCAGCTGA 58.470 47.619 16.98 13.74 0.00 4.26
3123 6831 2.998670 CAACTACATGTGGAGTCAGCTG 59.001 50.000 16.98 7.63 0.00 4.24
3127 6835 3.483808 TTGCAACTACATGTGGAGTCA 57.516 42.857 16.98 7.03 0.00 3.41
3128 6836 4.455533 TGATTTGCAACTACATGTGGAGTC 59.544 41.667 16.98 4.54 0.00 3.36
3213 6928 3.397482 GCTTCAGCACTCTTTCAGAAGA 58.603 45.455 0.00 0.00 39.10 2.87
3227 6942 6.980978 TGTGTTCTATATAGAAGTGCTTCAGC 59.019 38.462 22.76 10.23 42.48 4.26
3242 6957 9.938280 AGTAAAATAAGCTGTGTGTGTTCTATA 57.062 29.630 0.00 0.00 0.00 1.31
3243 6958 8.721478 CAGTAAAATAAGCTGTGTGTGTTCTAT 58.279 33.333 0.00 0.00 0.00 1.98
3244 6959 7.172532 CCAGTAAAATAAGCTGTGTGTGTTCTA 59.827 37.037 0.00 0.00 0.00 2.10
3246 6961 6.142817 CCAGTAAAATAAGCTGTGTGTGTTC 58.857 40.000 0.00 0.00 0.00 3.18
3247 6962 5.592688 ACCAGTAAAATAAGCTGTGTGTGTT 59.407 36.000 0.00 0.00 0.00 3.32
3248 6963 5.130350 ACCAGTAAAATAAGCTGTGTGTGT 58.870 37.500 0.00 0.00 0.00 3.72
3249 6964 5.689383 ACCAGTAAAATAAGCTGTGTGTG 57.311 39.130 0.00 0.00 0.00 3.82
3251 6966 5.240623 TCCAACCAGTAAAATAAGCTGTGTG 59.759 40.000 0.00 0.00 0.00 3.82
3252 6967 5.381757 TCCAACCAGTAAAATAAGCTGTGT 58.618 37.500 0.00 0.00 0.00 3.72
3253 6968 5.957842 TCCAACCAGTAAAATAAGCTGTG 57.042 39.130 0.00 0.00 0.00 3.66
3254 6969 8.823220 ATATTCCAACCAGTAAAATAAGCTGT 57.177 30.769 0.00 0.00 0.00 4.40
3263 6981 8.815565 TGCAATAGAATATTCCAACCAGTAAA 57.184 30.769 11.92 0.00 0.00 2.01
3266 6984 6.891908 AGTTGCAATAGAATATTCCAACCAGT 59.108 34.615 21.19 8.71 33.50 4.00
3267 6985 7.338800 AGTTGCAATAGAATATTCCAACCAG 57.661 36.000 21.19 7.83 33.50 4.00
3268 6986 7.716799 AAGTTGCAATAGAATATTCCAACCA 57.283 32.000 21.19 9.00 33.50 3.67
3284 7002 4.069304 ACAAGTAGCCGAATAAGTTGCAA 58.931 39.130 0.00 0.00 0.00 4.08
3300 7018 7.074653 AGGAACAAAGGAGATGTTACAAGTA 57.925 36.000 4.60 0.00 42.85 2.24
3308 7026 4.453480 TCCAAAGGAACAAAGGAGATGT 57.547 40.909 0.00 0.00 0.00 3.06
3315 7033 5.299148 TGCATTTCATCCAAAGGAACAAAG 58.701 37.500 0.00 0.00 34.34 2.77
3321 7039 2.832733 TGCATGCATTTCATCCAAAGGA 59.167 40.909 18.46 0.00 35.55 3.36
3469 7187 6.550108 TCAAGAACAGAAGTAGTACCTGAAGT 59.450 38.462 12.01 0.00 0.00 3.01
3486 7204 5.335897 GCCATTCAAGCTAACATCAAGAACA 60.336 40.000 0.00 0.00 0.00 3.18
3499 7217 1.741706 CGATGAAGTGCCATTCAAGCT 59.258 47.619 4.95 0.00 42.21 3.74
3532 7250 8.282256 AGCTAATTGTGGGGTTAGATTTAAGAT 58.718 33.333 0.00 0.00 31.15 2.40
3533 7251 7.639378 AGCTAATTGTGGGGTTAGATTTAAGA 58.361 34.615 0.00 0.00 31.15 2.10
3534 7252 7.881775 AGCTAATTGTGGGGTTAGATTTAAG 57.118 36.000 0.00 0.00 31.15 1.85
3535 7253 8.330247 TGTAGCTAATTGTGGGGTTAGATTTAA 58.670 33.333 0.00 0.00 30.16 1.52
3536 7254 7.863722 TGTAGCTAATTGTGGGGTTAGATTTA 58.136 34.615 0.00 0.00 30.16 1.40
3537 7255 6.727394 TGTAGCTAATTGTGGGGTTAGATTT 58.273 36.000 0.00 0.00 30.16 2.17
3538 7256 6.321821 TGTAGCTAATTGTGGGGTTAGATT 57.678 37.500 0.00 0.00 30.16 2.40
3539 7257 5.968676 TGTAGCTAATTGTGGGGTTAGAT 57.031 39.130 0.00 0.00 32.06 1.98
3540 7258 5.427157 TCATGTAGCTAATTGTGGGGTTAGA 59.573 40.000 0.00 0.00 31.15 2.10
3541 7259 5.680619 TCATGTAGCTAATTGTGGGGTTAG 58.319 41.667 0.00 0.00 0.00 2.34
3542 7260 5.427157 TCTCATGTAGCTAATTGTGGGGTTA 59.573 40.000 0.00 0.00 0.00 2.85
3543 7261 4.227300 TCTCATGTAGCTAATTGTGGGGTT 59.773 41.667 0.00 0.00 0.00 4.11
3544 7262 3.780294 TCTCATGTAGCTAATTGTGGGGT 59.220 43.478 0.00 0.00 0.00 4.95
3545 7263 4.422073 TCTCATGTAGCTAATTGTGGGG 57.578 45.455 0.00 0.00 0.00 4.96
3591 7419 6.374053 TGCATACGAAAGGAAGATCATCAAAA 59.626 34.615 0.00 0.00 0.00 2.44
3603 7431 2.419574 GCCCTAACTGCATACGAAAGGA 60.420 50.000 0.00 0.00 0.00 3.36
3604 7432 1.940613 GCCCTAACTGCATACGAAAGG 59.059 52.381 0.00 0.00 0.00 3.11
3605 7433 2.906354 AGCCCTAACTGCATACGAAAG 58.094 47.619 0.00 0.00 0.00 2.62
3606 7434 3.055385 AGAAGCCCTAACTGCATACGAAA 60.055 43.478 0.00 0.00 0.00 3.46
3607 7435 2.500098 AGAAGCCCTAACTGCATACGAA 59.500 45.455 0.00 0.00 0.00 3.85
3608 7436 2.100916 GAGAAGCCCTAACTGCATACGA 59.899 50.000 0.00 0.00 0.00 3.43
3609 7437 2.159099 TGAGAAGCCCTAACTGCATACG 60.159 50.000 0.00 0.00 0.00 3.06
3610 7438 3.198872 GTGAGAAGCCCTAACTGCATAC 58.801 50.000 0.00 0.00 0.00 2.39
3659 7487 6.379988 TGCAAGTACTATAGACAAGTGATCCA 59.620 38.462 6.78 0.00 0.00 3.41
3692 7520 7.778853 AGGATTAGATTTGCATGTGAAGAGATT 59.221 33.333 0.00 0.00 0.00 2.40
3714 7542 3.449018 ACTACTGAGACGCAATTGAGGAT 59.551 43.478 10.34 0.00 0.00 3.24
3769 7597 6.365247 GTCATGCGACGGTATGAACTATAAAT 59.635 38.462 0.00 0.00 45.08 1.40
3938 7766 2.394930 GTTGCAAAACCAACAACCCT 57.605 45.000 0.00 0.00 43.45 4.34
3941 7769 1.396648 GCAGGTTGCAAAACCAACAAC 59.603 47.619 10.18 0.00 45.25 3.32
3986 7826 1.273986 TTCTGCAGGGCCAGCTATCA 61.274 55.000 22.14 0.11 32.87 2.15
4010 7850 0.968405 GCAAGGTTTTCTGGATGCCA 59.032 50.000 0.00 0.00 0.00 4.92
4068 7908 3.058016 CACAACTTGATGAACTTGGCGAT 60.058 43.478 0.00 0.00 0.00 4.58
4080 7920 8.853077 TCTCATAAAGAACATCACAACTTGAT 57.147 30.769 0.00 0.00 46.75 2.57
4147 7987 7.341445 ACCTAGCAAAATTTACTCACAACAA 57.659 32.000 0.00 0.00 0.00 2.83
4151 7991 9.127277 AGTAAAACCTAGCAAAATTTACTCACA 57.873 29.630 0.00 0.00 40.78 3.58
4216 8057 9.649167 GAAGCCTACTTAAAACTTGAGTACATA 57.351 33.333 0.00 0.00 35.82 2.29
4217 8058 8.376270 AGAAGCCTACTTAAAACTTGAGTACAT 58.624 33.333 0.00 0.00 35.82 2.29
4219 8060 8.496751 CAAGAAGCCTACTTAAAACTTGAGTAC 58.503 37.037 0.00 0.00 36.68 2.73
4225 8074 8.756486 TTTACCAAGAAGCCTACTTAAAACTT 57.244 30.769 0.00 0.00 35.82 2.66
4227 8076 9.976511 AATTTTACCAAGAAGCCTACTTAAAAC 57.023 29.630 0.00 0.00 35.82 2.43
4231 8080 7.555195 GGCTAATTTTACCAAGAAGCCTACTTA 59.445 37.037 3.26 0.00 43.70 2.24
4260 8109 4.455877 CCTTTCTACACACCTAAAGCCAAG 59.544 45.833 0.00 0.00 0.00 3.61
4283 8132 2.104170 TGGGAGTGTTTTCCAACAACC 58.896 47.619 0.00 0.00 44.72 3.77
4292 8141 8.477419 TTTTTGAGAATAGATGGGAGTGTTTT 57.523 30.769 0.00 0.00 0.00 2.43
4320 8172 7.610305 GGAGTATTTGTGACTCAGGGATTTTTA 59.390 37.037 5.26 0.00 44.34 1.52
4331 8183 2.738964 GCGGAGGGAGTATTTGTGACTC 60.739 54.545 0.00 0.00 42.24 3.36
4332 8184 1.207329 GCGGAGGGAGTATTTGTGACT 59.793 52.381 0.00 0.00 0.00 3.41
4335 8187 2.107950 TTGCGGAGGGAGTATTTGTG 57.892 50.000 0.00 0.00 0.00 3.33
4344 8197 0.179040 AAGACGTTTTTGCGGAGGGA 60.179 50.000 0.00 0.00 35.98 4.20
4375 8228 9.682465 AAAAAGGTTAGAACATCTTATACTCCC 57.318 33.333 0.00 0.00 0.00 4.30
4409 8267 9.944376 AACACACTAAAACATGTCTATACATCT 57.056 29.630 0.00 0.00 44.70 2.90
4418 8276 5.052633 GCGAACAAACACACTAAAACATGTC 60.053 40.000 0.00 0.00 0.00 3.06
4452 8317 8.484214 AGAGCATTTAGATCACTACATAAGGA 57.516 34.615 0.00 0.00 34.30 3.36
4552 8443 5.050363 CGGACGCATAGTAATTGCTGTATTT 60.050 40.000 6.28 0.00 37.96 1.40
4589 8480 2.533435 TGAGACACCTCAGGGCCT 59.467 61.111 0.00 0.00 44.01 5.19
4602 8501 3.370231 TGCTGCGTAGGCGTGAGA 61.370 61.111 1.76 0.00 44.10 3.27
4634 8533 4.020617 TGACCAGCAAGGAGGCCG 62.021 66.667 0.00 0.00 41.22 6.13
4635 8534 2.360475 GTGACCAGCAAGGAGGCC 60.360 66.667 0.00 0.00 41.22 5.19
4636 8535 2.167398 TACGTGACCAGCAAGGAGGC 62.167 60.000 0.00 0.00 41.22 4.70
4637 8536 0.389948 GTACGTGACCAGCAAGGAGG 60.390 60.000 0.00 0.00 41.22 4.30
4638 8537 3.123674 GTACGTGACCAGCAAGGAG 57.876 57.895 0.00 0.00 41.22 3.69
4647 8546 1.067776 CCTTGAGTCAGGTACGTGACC 60.068 57.143 33.77 26.73 46.94 4.02
4648 8547 1.067776 CCCTTGAGTCAGGTACGTGAC 60.068 57.143 31.72 31.72 46.22 3.67
4649 8548 1.254026 CCCTTGAGTCAGGTACGTGA 58.746 55.000 14.05 14.05 30.96 4.35
4650 8549 0.966920 ACCCTTGAGTCAGGTACGTG 59.033 55.000 9.30 9.30 30.96 4.49
4651 8550 0.966920 CACCCTTGAGTCAGGTACGT 59.033 55.000 3.85 0.00 30.98 3.57
4658 8557 1.347707 CTAACCTGCACCCTTGAGTCA 59.652 52.381 0.00 0.00 0.00 3.41
4662 8561 1.003839 CGCTAACCTGCACCCTTGA 60.004 57.895 0.00 0.00 0.00 3.02
4743 8660 3.162666 TGGTCTAGCGAGAAGGAGAAAA 58.837 45.455 0.00 0.00 31.96 2.29
4763 8680 0.749049 TCCATGATCACGAGCTCCTG 59.251 55.000 8.47 7.30 0.00 3.86
4764 8681 1.039068 CTCCATGATCACGAGCTCCT 58.961 55.000 8.47 0.00 0.00 3.69
4839 9772 3.973206 TGTTGTAACCATCTCGTCCAT 57.027 42.857 0.00 0.00 0.00 3.41
4840 9773 3.755112 TTGTTGTAACCATCTCGTCCA 57.245 42.857 0.00 0.00 0.00 4.02
4841 9774 5.236478 CCATATTGTTGTAACCATCTCGTCC 59.764 44.000 0.00 0.00 0.00 4.79
4842 9775 5.277345 GCCATATTGTTGTAACCATCTCGTC 60.277 44.000 0.00 0.00 0.00 4.20
4843 9776 4.574828 GCCATATTGTTGTAACCATCTCGT 59.425 41.667 0.00 0.00 0.00 4.18
4844 9777 4.574421 TGCCATATTGTTGTAACCATCTCG 59.426 41.667 0.00 0.00 0.00 4.04
4845 9778 5.506317 GCTGCCATATTGTTGTAACCATCTC 60.506 44.000 0.00 0.00 0.00 2.75
4846 9779 4.339247 GCTGCCATATTGTTGTAACCATCT 59.661 41.667 0.00 0.00 0.00 2.90
4847 9780 4.097741 TGCTGCCATATTGTTGTAACCATC 59.902 41.667 0.00 0.00 0.00 3.51
4848 9781 4.022603 TGCTGCCATATTGTTGTAACCAT 58.977 39.130 0.00 0.00 0.00 3.55
4849 9782 3.425659 TGCTGCCATATTGTTGTAACCA 58.574 40.909 0.00 0.00 0.00 3.67
4850 9783 4.448537 TTGCTGCCATATTGTTGTAACC 57.551 40.909 0.00 0.00 0.00 2.85
4851 9784 5.519927 GGATTTGCTGCCATATTGTTGTAAC 59.480 40.000 0.00 0.00 0.00 2.50
4852 9785 5.659463 GGATTTGCTGCCATATTGTTGTAA 58.341 37.500 0.00 0.00 0.00 2.41
4853 9786 4.202000 CGGATTTGCTGCCATATTGTTGTA 60.202 41.667 0.00 0.00 0.00 2.41
4854 9787 3.429272 CGGATTTGCTGCCATATTGTTGT 60.429 43.478 0.00 0.00 0.00 3.32
4855 9788 3.117794 CGGATTTGCTGCCATATTGTTG 58.882 45.455 0.00 0.00 0.00 3.33
4856 9789 2.760092 ACGGATTTGCTGCCATATTGTT 59.240 40.909 0.00 0.00 0.00 2.83
4857 9790 2.378038 ACGGATTTGCTGCCATATTGT 58.622 42.857 0.00 0.00 0.00 2.71
4858 9791 3.441496 AACGGATTTGCTGCCATATTG 57.559 42.857 0.00 0.00 0.00 1.90
4859 9792 3.181476 GGAAACGGATTTGCTGCCATATT 60.181 43.478 0.00 0.00 33.58 1.28
4860 9793 2.362077 GGAAACGGATTTGCTGCCATAT 59.638 45.455 0.00 0.00 33.58 1.78
4861 9794 1.748493 GGAAACGGATTTGCTGCCATA 59.252 47.619 0.00 0.00 33.58 2.74
4862 9795 0.532115 GGAAACGGATTTGCTGCCAT 59.468 50.000 0.00 0.00 33.58 4.40
4863 9796 0.825425 TGGAAACGGATTTGCTGCCA 60.825 50.000 0.00 0.00 37.08 4.92
4864 9797 0.316841 TTGGAAACGGATTTGCTGCC 59.683 50.000 0.00 0.00 37.08 4.85
4865 9798 2.061028 CTTTGGAAACGGATTTGCTGC 58.939 47.619 0.00 0.00 37.08 5.25
4866 9799 3.641437 TCTTTGGAAACGGATTTGCTG 57.359 42.857 0.00 0.00 37.08 4.41
4867 9800 4.340950 TCTTTCTTTGGAAACGGATTTGCT 59.659 37.500 0.00 0.00 37.08 3.91
4868 9801 4.616953 TCTTTCTTTGGAAACGGATTTGC 58.383 39.130 0.00 0.00 36.63 3.68
4869 9802 6.978080 TCTTTCTTTCTTTGGAAACGGATTTG 59.022 34.615 0.00 0.00 36.63 2.32
4870 9803 7.107639 TCTTTCTTTCTTTGGAAACGGATTT 57.892 32.000 0.00 0.00 36.63 2.17
4871 9804 6.709018 TCTTTCTTTCTTTGGAAACGGATT 57.291 33.333 0.00 0.00 36.63 3.01
4872 9805 6.709018 TTCTTTCTTTCTTTGGAAACGGAT 57.291 33.333 0.00 0.00 36.63 4.18
4873 9806 6.518208 TTTCTTTCTTTCTTTGGAAACGGA 57.482 33.333 0.00 0.00 36.63 4.69
4874 9807 6.756542 ACATTTCTTTCTTTCTTTGGAAACGG 59.243 34.615 0.00 0.00 36.63 4.44
4875 9808 7.487829 TGACATTTCTTTCTTTCTTTGGAAACG 59.512 33.333 0.00 0.00 36.63 3.60
4876 9809 8.702163 TGACATTTCTTTCTTTCTTTGGAAAC 57.298 30.769 0.00 0.00 36.63 2.78
4877 9810 7.492344 GCTGACATTTCTTTCTTTCTTTGGAAA 59.508 33.333 0.00 0.00 38.90 3.13
4878 9811 6.980397 GCTGACATTTCTTTCTTTCTTTGGAA 59.020 34.615 0.00 0.00 0.00 3.53
4879 9812 6.096705 TGCTGACATTTCTTTCTTTCTTTGGA 59.903 34.615 0.00 0.00 0.00 3.53
4880 9813 6.275335 TGCTGACATTTCTTTCTTTCTTTGG 58.725 36.000 0.00 0.00 0.00 3.28
4881 9814 7.198390 TCTGCTGACATTTCTTTCTTTCTTTG 58.802 34.615 0.00 0.00 0.00 2.77
4882 9815 7.338800 TCTGCTGACATTTCTTTCTTTCTTT 57.661 32.000 0.00 0.00 0.00 2.52
4883 9816 6.949352 TCTGCTGACATTTCTTTCTTTCTT 57.051 33.333 0.00 0.00 0.00 2.52
4884 9817 6.713903 TCATCTGCTGACATTTCTTTCTTTCT 59.286 34.615 0.00 0.00 0.00 2.52
4885 9818 6.906659 TCATCTGCTGACATTTCTTTCTTTC 58.093 36.000 0.00 0.00 0.00 2.62
4886 9819 6.889301 TCATCTGCTGACATTTCTTTCTTT 57.111 33.333 0.00 0.00 0.00 2.52
4887 9820 6.853720 CATCATCTGCTGACATTTCTTTCTT 58.146 36.000 0.00 0.00 36.48 2.52
4888 9821 6.438259 CATCATCTGCTGACATTTCTTTCT 57.562 37.500 0.00 0.00 36.48 2.52
4903 9836 4.580868 AGCTTCATCCATAGCATCATCTG 58.419 43.478 0.00 0.00 39.85 2.90
4904 9837 4.286291 TGAGCTTCATCCATAGCATCATCT 59.714 41.667 0.00 0.00 39.85 2.90
4905 9838 4.392445 GTGAGCTTCATCCATAGCATCATC 59.608 45.833 0.00 0.00 39.85 2.92
4906 9839 4.202430 TGTGAGCTTCATCCATAGCATCAT 60.202 41.667 0.00 0.00 39.85 2.45
4907 9840 3.135167 TGTGAGCTTCATCCATAGCATCA 59.865 43.478 0.00 0.00 39.85 3.07
4908 9841 3.736720 TGTGAGCTTCATCCATAGCATC 58.263 45.455 0.00 0.00 39.85 3.91
4909 9842 3.851458 TGTGAGCTTCATCCATAGCAT 57.149 42.857 0.00 0.00 39.85 3.79
4910 9843 3.273434 GTTGTGAGCTTCATCCATAGCA 58.727 45.455 0.00 0.00 39.85 3.49
4911 9844 3.273434 TGTTGTGAGCTTCATCCATAGC 58.727 45.455 0.00 0.00 37.66 2.97
4912 9845 3.311871 GCTGTTGTGAGCTTCATCCATAG 59.688 47.826 0.00 0.00 35.95 2.23
4913 9846 3.273434 GCTGTTGTGAGCTTCATCCATA 58.727 45.455 0.00 0.00 35.95 2.74
4914 9847 2.089980 GCTGTTGTGAGCTTCATCCAT 58.910 47.619 0.00 0.00 35.95 3.41
4915 9848 1.527034 GCTGTTGTGAGCTTCATCCA 58.473 50.000 0.00 0.00 35.95 3.41
4923 9856 0.664761 TTGCAGAAGCTGTTGTGAGC 59.335 50.000 0.00 0.00 42.74 4.26
4924 9857 1.672363 TGTTGCAGAAGCTGTTGTGAG 59.328 47.619 0.00 0.00 42.74 3.51
4925 9858 1.672363 CTGTTGCAGAAGCTGTTGTGA 59.328 47.619 0.00 0.00 42.74 3.58
4926 9859 1.672363 TCTGTTGCAGAAGCTGTTGTG 59.328 47.619 0.00 0.00 37.57 3.33
4927 9860 2.042686 TCTGTTGCAGAAGCTGTTGT 57.957 45.000 0.00 0.00 37.57 3.32
4935 9868 8.571461 AGAAATAATCATCTTCTGTTGCAGAA 57.429 30.769 10.61 10.61 46.50 3.02
4936 9869 8.571461 AAGAAATAATCATCTTCTGTTGCAGA 57.429 30.769 0.00 0.00 38.87 4.26
4937 9870 9.932699 CTAAGAAATAATCATCTTCTGTTGCAG 57.067 33.333 0.00 0.00 37.16 4.41
4938 9871 8.400947 GCTAAGAAATAATCATCTTCTGTTGCA 58.599 33.333 0.00 0.00 37.16 4.08
4939 9872 7.859875 GGCTAAGAAATAATCATCTTCTGTTGC 59.140 37.037 0.00 0.00 37.16 4.17
4940 9873 9.118300 AGGCTAAGAAATAATCATCTTCTGTTG 57.882 33.333 0.00 0.00 37.16 3.33
4941 9874 9.118300 CAGGCTAAGAAATAATCATCTTCTGTT 57.882 33.333 0.00 0.00 37.16 3.16
4942 9875 7.228308 GCAGGCTAAGAAATAATCATCTTCTGT 59.772 37.037 0.00 0.00 37.16 3.41
4943 9876 7.228108 TGCAGGCTAAGAAATAATCATCTTCTG 59.772 37.037 0.00 0.00 37.16 3.02
4944 9877 7.285566 TGCAGGCTAAGAAATAATCATCTTCT 58.714 34.615 0.00 0.00 37.16 2.85
4945 9878 7.502120 TGCAGGCTAAGAAATAATCATCTTC 57.498 36.000 0.00 0.00 37.16 2.87
4946 9879 6.016443 GCTGCAGGCTAAGAAATAATCATCTT 60.016 38.462 17.12 0.00 39.19 2.40
4947 9880 5.472820 GCTGCAGGCTAAGAAATAATCATCT 59.527 40.000 17.12 0.00 38.06 2.90
4948 9881 5.240183 TGCTGCAGGCTAAGAAATAATCATC 59.760 40.000 17.12 0.00 42.39 2.92
4949 9882 5.135383 TGCTGCAGGCTAAGAAATAATCAT 58.865 37.500 17.12 0.00 42.39 2.45
4950 9883 4.525996 TGCTGCAGGCTAAGAAATAATCA 58.474 39.130 17.12 0.00 42.39 2.57
4951 9884 5.277047 GTTGCTGCAGGCTAAGAAATAATC 58.723 41.667 17.12 0.00 42.39 1.75
4952 9885 4.098501 GGTTGCTGCAGGCTAAGAAATAAT 59.901 41.667 17.12 0.00 42.39 1.28
4953 9886 3.443681 GGTTGCTGCAGGCTAAGAAATAA 59.556 43.478 17.12 0.00 42.39 1.40
4954 9887 3.016736 GGTTGCTGCAGGCTAAGAAATA 58.983 45.455 17.12 0.00 42.39 1.40
4955 9888 1.821136 GGTTGCTGCAGGCTAAGAAAT 59.179 47.619 17.12 0.00 42.39 2.17
4956 9889 1.247567 GGTTGCTGCAGGCTAAGAAA 58.752 50.000 17.12 0.00 42.39 2.52
4957 9890 0.955428 CGGTTGCTGCAGGCTAAGAA 60.955 55.000 17.12 0.00 42.39 2.52
4958 9891 1.375908 CGGTTGCTGCAGGCTAAGA 60.376 57.895 17.12 0.00 42.39 2.10
4959 9892 1.237285 AACGGTTGCTGCAGGCTAAG 61.237 55.000 17.12 5.54 42.39 2.18
4960 9893 0.821711 AAACGGTTGCTGCAGGCTAA 60.822 50.000 17.12 2.95 42.39 3.09
4961 9894 0.821711 AAAACGGTTGCTGCAGGCTA 60.822 50.000 17.12 1.92 42.39 3.93
4962 9895 2.127232 AAAACGGTTGCTGCAGGCT 61.127 52.632 17.12 0.00 42.39 4.58
4963 9896 1.950630 CAAAACGGTTGCTGCAGGC 60.951 57.895 17.12 8.54 42.22 4.85
4964 9897 0.594796 GACAAAACGGTTGCTGCAGG 60.595 55.000 17.12 0.00 0.00 4.85
4965 9898 0.100325 TGACAAAACGGTTGCTGCAG 59.900 50.000 10.11 10.11 0.00 4.41
4966 9899 0.743688 ATGACAAAACGGTTGCTGCA 59.256 45.000 0.00 0.00 0.00 4.41
4967 9900 1.130955 CATGACAAAACGGTTGCTGC 58.869 50.000 0.00 0.00 0.00 5.25
4968 9901 1.066908 ACCATGACAAAACGGTTGCTG 59.933 47.619 0.00 0.00 0.00 4.41
4969 9902 1.398692 ACCATGACAAAACGGTTGCT 58.601 45.000 0.00 0.00 0.00 3.91
4970 9903 2.217429 AACCATGACAAAACGGTTGC 57.783 45.000 0.00 0.00 40.22 4.17
4972 9905 1.202475 GGCAACCATGACAAAACGGTT 60.202 47.619 0.00 0.00 42.45 4.44
4973 9906 0.387565 GGCAACCATGACAAAACGGT 59.612 50.000 0.00 0.00 33.41 4.83
4974 9907 3.193471 GGCAACCATGACAAAACGG 57.807 52.632 0.00 0.00 33.41 4.44
4991 9924 2.981914 ATATGTGGGCATGTGGCGGG 62.982 60.000 0.00 0.00 46.16 6.13
4992 9925 0.250684 TATATGTGGGCATGTGGCGG 60.251 55.000 0.00 0.00 46.16 6.13
4993 9926 1.825090 ATATATGTGGGCATGTGGCG 58.175 50.000 0.00 0.00 46.16 5.69
4994 9927 4.785301 AGATATATATGTGGGCATGTGGC 58.215 43.478 0.00 0.00 43.74 5.01
4995 9928 7.129457 AGTAGATATATATGTGGGCATGTGG 57.871 40.000 0.00 0.00 36.58 4.17
4996 9929 7.785033 TGAGTAGATATATATGTGGGCATGTG 58.215 38.462 0.00 0.00 36.58 3.21
4997 9930 7.978099 TGAGTAGATATATATGTGGGCATGT 57.022 36.000 0.00 0.00 36.58 3.21
5000 9933 9.715119 ACTATTGAGTAGATATATATGTGGGCA 57.285 33.333 0.00 0.00 32.65 5.36
5019 9952 5.159273 TGCATGGTGTACTCAACTATTGA 57.841 39.130 0.00 0.00 38.17 2.57
5020 9953 5.008019 GGATGCATGGTGTACTCAACTATTG 59.992 44.000 2.46 0.00 31.63 1.90
5021 9954 5.126067 GGATGCATGGTGTACTCAACTATT 58.874 41.667 2.46 0.00 31.63 1.73
5022 9955 4.164030 TGGATGCATGGTGTACTCAACTAT 59.836 41.667 2.46 0.00 31.63 2.12
5023 9956 3.517500 TGGATGCATGGTGTACTCAACTA 59.482 43.478 2.46 0.00 31.63 2.24
5024 9957 2.305635 TGGATGCATGGTGTACTCAACT 59.694 45.455 2.46 0.00 31.63 3.16
5025 9958 2.710377 TGGATGCATGGTGTACTCAAC 58.290 47.619 2.46 0.00 0.00 3.18
5026 9959 3.200605 AGATGGATGCATGGTGTACTCAA 59.799 43.478 2.46 0.00 0.00 3.02
5027 9960 2.773661 AGATGGATGCATGGTGTACTCA 59.226 45.455 2.46 0.00 0.00 3.41
5028 9961 3.482156 AGATGGATGCATGGTGTACTC 57.518 47.619 2.46 0.00 0.00 2.59
5029 9962 3.969976 ACTAGATGGATGCATGGTGTACT 59.030 43.478 2.46 0.00 0.00 2.73
5030 9963 4.202253 TGACTAGATGGATGCATGGTGTAC 60.202 45.833 2.46 0.00 0.00 2.90
5031 9964 3.966665 TGACTAGATGGATGCATGGTGTA 59.033 43.478 2.46 0.00 0.00 2.90
5032 9965 2.773661 TGACTAGATGGATGCATGGTGT 59.226 45.455 2.46 0.00 0.00 4.16
5033 9966 3.181457 ACTGACTAGATGGATGCATGGTG 60.181 47.826 2.46 0.00 0.00 4.17
5034 9967 3.044156 ACTGACTAGATGGATGCATGGT 58.956 45.455 2.46 0.42 0.00 3.55
5035 9968 3.400255 CACTGACTAGATGGATGCATGG 58.600 50.000 2.46 0.00 0.00 3.66
5036 9969 3.400255 CCACTGACTAGATGGATGCATG 58.600 50.000 2.46 0.00 35.33 4.06
5037 9970 2.224475 GCCACTGACTAGATGGATGCAT 60.224 50.000 0.00 0.00 35.33 3.96
5038 9971 1.139654 GCCACTGACTAGATGGATGCA 59.860 52.381 0.00 0.00 35.33 3.96
5039 9972 1.871408 CGCCACTGACTAGATGGATGC 60.871 57.143 0.00 0.00 35.33 3.91
5040 9973 1.269988 CCGCCACTGACTAGATGGATG 60.270 57.143 0.00 0.00 35.33 3.51
5041 9974 1.043816 CCGCCACTGACTAGATGGAT 58.956 55.000 0.00 0.00 35.33 3.41
5042 9975 0.033503 TCCGCCACTGACTAGATGGA 60.034 55.000 0.00 0.00 35.33 3.41
5043 9976 0.387202 CTCCGCCACTGACTAGATGG 59.613 60.000 0.00 0.00 36.51 3.51
5044 9977 1.066303 GTCTCCGCCACTGACTAGATG 59.934 57.143 0.00 0.00 0.00 2.90
5045 9978 1.341089 TGTCTCCGCCACTGACTAGAT 60.341 52.381 0.00 0.00 0.00 1.98
5046 9979 0.037734 TGTCTCCGCCACTGACTAGA 59.962 55.000 0.00 0.00 0.00 2.43
5047 9980 0.453793 CTGTCTCCGCCACTGACTAG 59.546 60.000 0.00 0.00 0.00 2.57
5048 9981 0.965866 CCTGTCTCCGCCACTGACTA 60.966 60.000 0.00 0.00 0.00 2.59
5049 9982 2.279069 CCTGTCTCCGCCACTGACT 61.279 63.158 0.00 0.00 0.00 3.41
5050 9983 2.262915 CCTGTCTCCGCCACTGAC 59.737 66.667 0.00 0.00 0.00 3.51
5051 9984 3.695606 GCCTGTCTCCGCCACTGA 61.696 66.667 0.00 0.00 0.00 3.41
5052 9985 4.767255 GGCCTGTCTCCGCCACTG 62.767 72.222 0.00 0.00 45.01 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.