Multiple sequence alignment - TraesCS7A01G308400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G308400 chr7A 100.000 6353 0 0 1 6353 436692693 436699045 0.000000e+00 11732.0
1 TraesCS7A01G308400 chr7A 82.857 105 14 3 6252 6353 736072702 736072599 2.440000e-14 91.6
2 TraesCS7A01G308400 chr7A 82.857 105 14 3 6252 6353 736314755 736314652 2.440000e-14 91.6
3 TraesCS7A01G308400 chr7D 95.257 3458 112 26 2762 6194 386727010 386730440 0.000000e+00 5430.0
4 TraesCS7A01G308400 chr7D 88.317 2388 117 64 474 2754 386724628 386726960 0.000000e+00 2715.0
5 TraesCS7A01G308400 chr7D 88.830 188 13 5 1 186 604359762 604359581 2.300000e-54 224.0
6 TraesCS7A01G308400 chr7D 88.889 90 6 3 6262 6347 576890244 576890333 2.420000e-19 108.0
7 TraesCS7A01G308400 chr7D 90.541 74 7 0 6280 6353 82609657 82609730 1.460000e-16 99.0
8 TraesCS7A01G308400 chr7D 86.905 84 9 2 6270 6353 6134961 6135042 6.780000e-15 93.5
9 TraesCS7A01G308400 chr7D 88.462 78 7 2 6277 6353 255419873 255419949 6.780000e-15 93.5
10 TraesCS7A01G308400 chr7D 82.653 98 13 3 6260 6353 162824837 162824740 4.080000e-12 84.2
11 TraesCS7A01G308400 chr7B 93.999 3516 123 36 2751 6226 381825735 381829202 0.000000e+00 5243.0
12 TraesCS7A01G308400 chr7B 83.834 2431 143 110 474 2754 381823363 381825693 0.000000e+00 2082.0
13 TraesCS7A01G308400 chr7B 90.608 181 13 4 1 179 724736311 724736489 2.960000e-58 237.0
14 TraesCS7A01G308400 chr7B 89.362 188 11 5 1 186 151377481 151377661 1.780000e-55 228.0
15 TraesCS7A01G308400 chr5D 93.469 245 15 1 189 432 487743880 487744124 4.680000e-96 363.0
16 TraesCS7A01G308400 chr4D 91.935 248 17 3 189 434 495345586 495345340 1.700000e-90 344.0
17 TraesCS7A01G308400 chr4D 92.000 175 10 3 10 182 44140112 44139940 6.360000e-60 243.0
18 TraesCS7A01G308400 chr4D 84.536 97 11 3 6260 6352 112230881 112230785 6.780000e-15 93.5
19 TraesCS7A01G308400 chr5B 91.870 246 18 2 189 432 338531277 338531522 6.100000e-90 342.0
20 TraesCS7A01G308400 chr5B 91.837 245 18 2 189 432 677816953 677816710 2.190000e-89 340.0
21 TraesCS7A01G308400 chr3D 91.837 245 19 1 189 432 28849708 28849952 2.190000e-89 340.0
22 TraesCS7A01G308400 chr3D 91.463 246 20 1 189 433 22038232 22038477 2.840000e-88 337.0
23 TraesCS7A01G308400 chr3D 100.000 34 0 0 6314 6347 571861435 571861468 5.320000e-06 63.9
24 TraesCS7A01G308400 chr3D 100.000 30 0 0 6310 6339 559110798 559110827 8.900000e-04 56.5
25 TraesCS7A01G308400 chr2D 91.463 246 20 1 189 433 21540410 21540165 2.840000e-88 337.0
26 TraesCS7A01G308400 chr2D 77.190 548 85 26 4712 5225 577153578 577153037 3.750000e-72 283.0
27 TraesCS7A01G308400 chr2D 87.179 234 28 2 3354 3586 577155210 577154978 1.360000e-66 265.0
28 TraesCS7A01G308400 chr2D 90.957 188 9 4 1 186 382068556 382068737 4.920000e-61 246.0
29 TraesCS7A01G308400 chr2D 80.882 272 52 0 4439 4710 577153945 577153674 1.390000e-51 215.0
30 TraesCS7A01G308400 chr2D 75.991 454 83 19 3966 4415 577154497 577154066 1.790000e-50 211.0
31 TraesCS7A01G308400 chr2D 87.302 126 13 3 3117 3241 577155844 577155721 2.390000e-29 141.0
32 TraesCS7A01G308400 chr2D 87.850 107 9 3 6251 6353 604074417 604074523 8.650000e-24 122.0
33 TraesCS7A01G308400 chr2D 85.859 99 8 5 6260 6353 24934119 24934216 4.050000e-17 100.0
34 TraesCS7A01G308400 chr2D 88.095 84 8 2 6270 6353 576584209 576584290 1.460000e-16 99.0
35 TraesCS7A01G308400 chr2D 84.946 93 11 1 6260 6349 484448740 484448832 2.440000e-14 91.6
36 TraesCS7A01G308400 chr2D 95.122 41 1 1 5842 5881 577152707 577152667 5.320000e-06 63.9
37 TraesCS7A01G308400 chr3A 91.429 245 19 2 189 432 55482986 55483229 1.020000e-87 335.0
38 TraesCS7A01G308400 chr1D 91.429 245 20 1 189 432 341843998 341843754 1.020000e-87 335.0
39 TraesCS7A01G308400 chr1D 89.560 182 14 4 1 179 62562176 62562355 6.410000e-55 226.0
40 TraesCS7A01G308400 chr1D 89.189 185 14 3 1 182 172969807 172969626 6.410000e-55 226.0
41 TraesCS7A01G308400 chr1D 91.892 74 6 0 6280 6353 480887556 480887629 3.130000e-18 104.0
42 TraesCS7A01G308400 chr2A 87.124 233 28 2 3355 3586 715339700 715339469 4.880000e-66 263.0
43 TraesCS7A01G308400 chr2A 81.985 272 49 0 4439 4710 715338438 715338167 1.380000e-56 231.0
44 TraesCS7A01G308400 chr2A 88.430 121 12 2 3117 3236 715340313 715340194 1.850000e-30 145.0
45 TraesCS7A01G308400 chr2A 93.243 74 5 0 6280 6353 619023109 619023182 6.730000e-20 110.0
46 TraesCS7A01G308400 chr2A 95.122 41 1 1 5842 5881 715337211 715337171 5.320000e-06 63.9
47 TraesCS7A01G308400 chr2B 86.752 234 29 2 3354 3586 694057204 694056972 6.320000e-65 259.0
48 TraesCS7A01G308400 chr2B 83.088 272 46 0 4439 4710 694055948 694055677 1.370000e-61 248.0
49 TraesCS7A01G308400 chr2B 76.211 454 82 19 3966 4415 694056487 694056056 3.860000e-52 217.0
50 TraesCS7A01G308400 chr2B 86.508 126 14 3 3117 3241 694057833 694057710 1.110000e-27 135.0
51 TraesCS7A01G308400 chr2B 87.500 88 8 2 6269 6353 496543543 496543630 1.460000e-16 99.0
52 TraesCS7A01G308400 chr2B 86.813 91 8 3 6266 6352 692626955 692627045 1.460000e-16 99.0
53 TraesCS7A01G308400 chr2B 95.122 41 1 1 5842 5881 694054719 694054679 5.320000e-06 63.9
54 TraesCS7A01G308400 chr6A 96.026 151 6 0 10 160 494484905 494484755 4.920000e-61 246.0
55 TraesCS7A01G308400 chr6A 85.437 103 10 3 6253 6352 102987002 102987102 1.130000e-17 102.0
56 TraesCS7A01G308400 chr4B 90.957 188 9 3 1 186 658215338 658215157 4.920000e-61 246.0
57 TraesCS7A01G308400 chr4A 94.805 77 3 1 6277 6352 602098356 602098432 1.120000e-22 119.0
58 TraesCS7A01G308400 chr3B 93.243 74 5 0 6280 6353 611726011 611725938 6.730000e-20 110.0
59 TraesCS7A01G308400 chr3B 87.931 58 7 0 3989 4046 759709909 759709966 1.140000e-07 69.4
60 TraesCS7A01G308400 chr6B 91.667 72 6 0 6280 6351 348659588 348659517 4.050000e-17 100.0
61 TraesCS7A01G308400 chr6B 92.754 69 5 0 6280 6348 348686971 348687039 4.050000e-17 100.0
62 TraesCS7A01G308400 chr6D 91.549 71 6 0 6283 6353 391923148 391923078 1.460000e-16 99.0
63 TraesCS7A01G308400 chr6D 90.625 64 5 1 6290 6352 461867085 461867148 4.080000e-12 84.2
64 TraesCS7A01G308400 chr6D 83.544 79 8 5 6278 6353 461797934 461798010 1.140000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G308400 chr7A 436692693 436699045 6352 False 11732.0 11732 100.0000 1 6353 1 chr7A.!!$F1 6352
1 TraesCS7A01G308400 chr7D 386724628 386730440 5812 False 4072.5 5430 91.7870 474 6194 2 chr7D.!!$F5 5720
2 TraesCS7A01G308400 chr7B 381823363 381829202 5839 False 3662.5 5243 88.9165 474 6226 2 chr7B.!!$F3 5752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.033228 CAGAGCAGTGGATCCGGATC 59.967 60.0 32.57 32.57 37.11 3.36 F
167 168 0.033228 GAGCAGTGGATCCGGATCTG 59.967 60.0 36.72 28.96 37.92 2.90 F
574 581 0.034476 TCACAGGCTCACAGCAAGAG 59.966 55.0 0.00 0.00 44.75 2.85 F
1755 1882 0.102120 CCTTTCTTTGTTGCCGCACA 59.898 50.0 0.00 0.00 0.00 4.57 F
2233 2371 0.178964 TTTCTCAAGCTGGGGTTGGG 60.179 55.0 9.13 6.35 42.15 4.12 F
2980 3255 0.541063 TGAGCAAGTCAGGTACGGGA 60.541 55.0 0.00 0.00 0.00 5.14 F
3264 3545 0.328258 AAACCTTCATCCGTCCAGGG 59.672 55.0 0.00 0.00 41.52 4.45 F
3269 3550 0.620410 TTCATCCGTCCAGGGTCCAT 60.620 55.0 0.00 0.00 41.52 3.41 F
5188 5489 0.606401 CCACCGTCAACAGCCTCATT 60.606 55.0 0.00 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1205 1298 0.692756 GGGAAGGGAGGGGAAGAGAG 60.693 65.000 0.00 0.00 0.00 3.20 R
1742 1869 1.007502 GATGCTGTGCGGCAACAAA 60.008 52.632 3.23 0.00 45.68 2.83 R
2154 2292 1.133823 CAGGCACCAACCATATAGGCA 60.134 52.381 0.00 0.00 43.14 4.75 R
2841 3113 0.110486 GTGGTGCTGGGGAAGAAGAA 59.890 55.000 0.00 0.00 0.00 2.52 R
3264 3545 0.179048 TGGATCGTGCATGGATGGAC 60.179 55.000 5.98 1.38 44.42 4.02 R
4842 5130 0.685458 ATGGCCATGAAACAGGAGGC 60.685 55.000 20.04 0.00 44.48 4.70 R
5107 5408 1.667154 CGAGGATCTGGAAGGCGACA 61.667 60.000 0.00 0.00 0.00 4.35 R
5285 5586 3.765511 TGACCTACTACTTACCATTGCGT 59.234 43.478 0.00 0.00 0.00 5.24 R
6108 6415 0.958091 CAAACAACCCAGCCGATTGA 59.042 50.000 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.430801 CTATACAACTCTTGAGGAAAATGGAG 57.569 38.462 2.55 0.00 0.00 3.86
26 27 5.053978 ACAACTCTTGAGGAAAATGGAGT 57.946 39.130 2.55 0.00 35.87 3.85
27 28 5.449553 ACAACTCTTGAGGAAAATGGAGTT 58.550 37.500 2.55 0.00 42.36 3.01
28 29 5.893824 ACAACTCTTGAGGAAAATGGAGTTT 59.106 36.000 0.00 0.00 40.54 2.66
29 30 6.183360 ACAACTCTTGAGGAAAATGGAGTTTG 60.183 38.462 0.00 0.00 40.54 2.93
30 31 4.829492 ACTCTTGAGGAAAATGGAGTTTGG 59.171 41.667 2.55 0.00 31.14 3.28
31 32 5.060427 TCTTGAGGAAAATGGAGTTTGGA 57.940 39.130 0.00 0.00 0.00 3.53
32 33 4.827284 TCTTGAGGAAAATGGAGTTTGGAC 59.173 41.667 0.00 0.00 0.00 4.02
33 34 4.177537 TGAGGAAAATGGAGTTTGGACA 57.822 40.909 0.00 0.00 0.00 4.02
34 35 4.541705 TGAGGAAAATGGAGTTTGGACAA 58.458 39.130 0.00 0.00 0.00 3.18
35 36 4.584325 TGAGGAAAATGGAGTTTGGACAAG 59.416 41.667 0.00 0.00 0.00 3.16
36 37 3.897505 AGGAAAATGGAGTTTGGACAAGG 59.102 43.478 0.00 0.00 0.00 3.61
37 38 3.895041 GGAAAATGGAGTTTGGACAAGGA 59.105 43.478 0.00 0.00 0.00 3.36
38 39 4.021981 GGAAAATGGAGTTTGGACAAGGAG 60.022 45.833 0.00 0.00 0.00 3.69
39 40 2.206576 ATGGAGTTTGGACAAGGAGC 57.793 50.000 0.00 0.00 0.00 4.70
40 41 1.140312 TGGAGTTTGGACAAGGAGCT 58.860 50.000 0.00 0.00 0.00 4.09
41 42 1.494721 TGGAGTTTGGACAAGGAGCTT 59.505 47.619 0.00 0.00 0.00 3.74
42 43 1.882623 GGAGTTTGGACAAGGAGCTTG 59.117 52.381 0.00 0.00 45.85 4.01
43 44 1.882623 GAGTTTGGACAAGGAGCTTGG 59.117 52.381 0.00 0.00 44.81 3.61
44 45 1.494721 AGTTTGGACAAGGAGCTTGGA 59.505 47.619 0.00 0.00 44.81 3.53
45 46 1.882623 GTTTGGACAAGGAGCTTGGAG 59.117 52.381 0.00 0.00 44.81 3.86
46 47 1.434188 TTGGACAAGGAGCTTGGAGA 58.566 50.000 0.00 0.00 44.81 3.71
47 48 0.979665 TGGACAAGGAGCTTGGAGAG 59.020 55.000 0.00 0.00 44.81 3.20
48 49 0.251634 GGACAAGGAGCTTGGAGAGG 59.748 60.000 0.00 0.00 44.81 3.69
49 50 1.270907 GACAAGGAGCTTGGAGAGGA 58.729 55.000 0.00 0.00 44.81 3.71
50 51 1.206849 GACAAGGAGCTTGGAGAGGAG 59.793 57.143 0.00 0.00 44.81 3.69
51 52 1.203237 ACAAGGAGCTTGGAGAGGAGA 60.203 52.381 0.00 0.00 44.81 3.71
52 53 1.905215 CAAGGAGCTTGGAGAGGAGAA 59.095 52.381 0.00 0.00 37.77 2.87
53 54 2.304180 CAAGGAGCTTGGAGAGGAGAAA 59.696 50.000 0.00 0.00 37.77 2.52
54 55 2.187100 AGGAGCTTGGAGAGGAGAAAG 58.813 52.381 0.00 0.00 0.00 2.62
55 56 1.406751 GGAGCTTGGAGAGGAGAAAGC 60.407 57.143 0.00 0.00 44.24 3.51
57 58 2.488204 GCTTGGAGAGGAGAAAGCTT 57.512 50.000 0.00 0.00 41.41 3.74
58 59 3.618690 GCTTGGAGAGGAGAAAGCTTA 57.381 47.619 0.00 0.00 41.41 3.09
59 60 3.944087 GCTTGGAGAGGAGAAAGCTTAA 58.056 45.455 0.00 0.00 41.41 1.85
60 61 3.938334 GCTTGGAGAGGAGAAAGCTTAAG 59.062 47.826 0.00 0.00 41.41 1.85
61 62 4.564613 GCTTGGAGAGGAGAAAGCTTAAGT 60.565 45.833 0.00 0.00 41.41 2.24
62 63 4.543590 TGGAGAGGAGAAAGCTTAAGTG 57.456 45.455 0.00 0.00 0.00 3.16
63 64 3.904339 TGGAGAGGAGAAAGCTTAAGTGT 59.096 43.478 0.00 0.00 0.00 3.55
64 65 4.249661 GGAGAGGAGAAAGCTTAAGTGTG 58.750 47.826 0.00 0.00 0.00 3.82
65 66 4.249661 GAGAGGAGAAAGCTTAAGTGTGG 58.750 47.826 0.00 0.00 0.00 4.17
66 67 2.744741 GAGGAGAAAGCTTAAGTGTGGC 59.255 50.000 0.00 0.00 0.00 5.01
67 68 2.373502 AGGAGAAAGCTTAAGTGTGGCT 59.626 45.455 0.00 0.00 37.99 4.75
68 69 2.744741 GGAGAAAGCTTAAGTGTGGCTC 59.255 50.000 0.00 5.38 35.06 4.70
69 70 2.413453 GAGAAAGCTTAAGTGTGGCTCG 59.587 50.000 0.00 0.00 35.06 5.03
70 71 2.037251 AGAAAGCTTAAGTGTGGCTCGA 59.963 45.455 0.00 0.00 35.06 4.04
71 72 2.086054 AAGCTTAAGTGTGGCTCGAG 57.914 50.000 8.45 8.45 35.06 4.04
72 73 0.390472 AGCTTAAGTGTGGCTCGAGC 60.390 55.000 29.38 29.38 41.14 5.03
73 74 0.670546 GCTTAAGTGTGGCTCGAGCA 60.671 55.000 36.27 20.82 44.36 4.26
74 75 2.009042 GCTTAAGTGTGGCTCGAGCAT 61.009 52.381 36.27 17.63 44.36 3.79
75 76 2.350522 CTTAAGTGTGGCTCGAGCATT 58.649 47.619 36.27 23.10 44.36 3.56
76 77 2.472695 TAAGTGTGGCTCGAGCATTT 57.527 45.000 36.27 21.46 44.36 2.32
77 78 1.160137 AAGTGTGGCTCGAGCATTTC 58.840 50.000 36.27 22.84 44.36 2.17
78 79 0.035317 AGTGTGGCTCGAGCATTTCA 59.965 50.000 36.27 22.95 44.36 2.69
79 80 1.089920 GTGTGGCTCGAGCATTTCAT 58.910 50.000 36.27 0.00 44.36 2.57
80 81 1.063174 GTGTGGCTCGAGCATTTCATC 59.937 52.381 36.27 18.81 44.36 2.92
81 82 0.302890 GTGGCTCGAGCATTTCATCG 59.697 55.000 36.27 0.00 44.36 3.84
82 83 0.175531 TGGCTCGAGCATTTCATCGA 59.824 50.000 36.27 7.39 45.06 3.59
83 84 1.290203 GGCTCGAGCATTTCATCGAA 58.710 50.000 36.27 0.00 46.34 3.71
84 85 1.004504 GGCTCGAGCATTTCATCGAAC 60.005 52.381 36.27 12.56 46.34 3.95
85 86 1.660607 GCTCGAGCATTTCATCGAACA 59.339 47.619 31.91 0.00 46.34 3.18
86 87 2.535732 GCTCGAGCATTTCATCGAACAC 60.536 50.000 31.91 0.00 46.34 3.32
87 88 1.999735 TCGAGCATTTCATCGAACACC 59.000 47.619 0.00 0.00 44.36 4.16
88 89 2.002586 CGAGCATTTCATCGAACACCT 58.997 47.619 0.00 0.00 41.40 4.00
89 90 2.029728 CGAGCATTTCATCGAACACCTC 59.970 50.000 0.00 0.00 41.40 3.85
90 91 3.002791 GAGCATTTCATCGAACACCTCA 58.997 45.455 0.00 0.00 0.00 3.86
91 92 3.614092 AGCATTTCATCGAACACCTCAT 58.386 40.909 0.00 0.00 0.00 2.90
92 93 3.376234 AGCATTTCATCGAACACCTCATG 59.624 43.478 0.00 0.00 0.00 3.07
93 94 3.127548 GCATTTCATCGAACACCTCATGT 59.872 43.478 0.00 0.00 46.42 3.21
105 106 2.251409 CCTCATGTGCATAGGAGGTG 57.749 55.000 29.58 10.75 41.58 4.00
106 107 1.764723 CCTCATGTGCATAGGAGGTGA 59.235 52.381 29.58 9.38 41.58 4.02
107 108 2.224233 CCTCATGTGCATAGGAGGTGAG 60.224 54.545 29.58 17.28 41.58 3.51
108 109 1.139654 TCATGTGCATAGGAGGTGAGC 59.860 52.381 0.00 0.00 0.00 4.26
109 110 1.140452 CATGTGCATAGGAGGTGAGCT 59.860 52.381 0.00 0.00 0.00 4.09
110 111 2.159179 TGTGCATAGGAGGTGAGCTA 57.841 50.000 0.00 0.00 0.00 3.32
111 112 2.034878 TGTGCATAGGAGGTGAGCTAG 58.965 52.381 0.00 0.00 0.00 3.42
112 113 2.311463 GTGCATAGGAGGTGAGCTAGA 58.689 52.381 0.00 0.00 0.00 2.43
113 114 2.295909 GTGCATAGGAGGTGAGCTAGAG 59.704 54.545 0.00 0.00 0.00 2.43
114 115 1.272212 GCATAGGAGGTGAGCTAGAGC 59.728 57.143 0.00 0.00 42.49 4.09
115 116 2.591923 CATAGGAGGTGAGCTAGAGCA 58.408 52.381 4.01 0.00 45.16 4.26
116 117 2.828661 TAGGAGGTGAGCTAGAGCAA 57.171 50.000 4.01 0.00 45.16 3.91
117 118 1.190643 AGGAGGTGAGCTAGAGCAAC 58.809 55.000 4.01 1.76 45.16 4.17
118 119 0.898320 GGAGGTGAGCTAGAGCAACA 59.102 55.000 4.01 1.02 45.16 3.33
119 120 1.404851 GGAGGTGAGCTAGAGCAACAC 60.405 57.143 17.51 17.51 45.16 3.32
120 121 1.273606 GAGGTGAGCTAGAGCAACACA 59.726 52.381 23.10 9.23 45.17 3.72
121 122 1.001406 AGGTGAGCTAGAGCAACACAC 59.999 52.381 23.10 16.96 45.17 3.82
122 123 1.001406 GGTGAGCTAGAGCAACACACT 59.999 52.381 23.10 0.00 45.17 3.55
123 124 2.548920 GGTGAGCTAGAGCAACACACTT 60.549 50.000 23.10 0.00 45.17 3.16
124 125 2.734079 GTGAGCTAGAGCAACACACTTC 59.266 50.000 19.50 2.76 43.94 3.01
125 126 2.630098 TGAGCTAGAGCAACACACTTCT 59.370 45.455 4.01 0.00 45.16 2.85
126 127 3.249917 GAGCTAGAGCAACACACTTCTC 58.750 50.000 4.01 0.00 45.16 2.87
127 128 2.028567 AGCTAGAGCAACACACTTCTCC 60.029 50.000 4.01 0.00 45.16 3.71
128 129 2.933056 GCTAGAGCAACACACTTCTCCC 60.933 54.545 0.00 0.00 41.59 4.30
129 130 1.131638 AGAGCAACACACTTCTCCCA 58.868 50.000 0.00 0.00 0.00 4.37
130 131 1.202698 AGAGCAACACACTTCTCCCAC 60.203 52.381 0.00 0.00 0.00 4.61
131 132 0.532862 AGCAACACACTTCTCCCACG 60.533 55.000 0.00 0.00 0.00 4.94
132 133 1.507141 GCAACACACTTCTCCCACGG 61.507 60.000 0.00 0.00 0.00 4.94
133 134 1.227853 AACACACTTCTCCCACGGC 60.228 57.895 0.00 0.00 0.00 5.68
134 135 2.358737 CACACTTCTCCCACGGCC 60.359 66.667 0.00 0.00 0.00 6.13
135 136 4.003788 ACACTTCTCCCACGGCCG 62.004 66.667 26.86 26.86 0.00 6.13
136 137 4.760047 CACTTCTCCCACGGCCGG 62.760 72.222 31.76 18.27 0.00 6.13
161 162 1.813513 AAAACAGAGCAGTGGATCCG 58.186 50.000 7.39 0.00 0.00 4.18
162 163 0.036010 AAACAGAGCAGTGGATCCGG 60.036 55.000 7.39 0.00 0.00 5.14
163 164 0.904865 AACAGAGCAGTGGATCCGGA 60.905 55.000 6.61 6.61 0.00 5.14
164 165 0.689080 ACAGAGCAGTGGATCCGGAT 60.689 55.000 19.21 19.21 0.00 4.18
165 166 0.033228 CAGAGCAGTGGATCCGGATC 59.967 60.000 32.57 32.57 37.11 3.36
166 167 0.105760 AGAGCAGTGGATCCGGATCT 60.106 55.000 36.72 20.82 37.92 2.75
167 168 0.033228 GAGCAGTGGATCCGGATCTG 59.967 60.000 36.72 28.96 37.92 2.90
168 169 0.689080 AGCAGTGGATCCGGATCTGT 60.689 55.000 36.72 22.05 37.92 3.41
169 170 0.179000 GCAGTGGATCCGGATCTGTT 59.821 55.000 36.72 22.24 37.92 3.16
170 171 1.808133 GCAGTGGATCCGGATCTGTTC 60.808 57.143 36.72 23.67 37.92 3.18
171 172 0.747255 AGTGGATCCGGATCTGTTCG 59.253 55.000 36.72 0.00 37.92 3.95
172 173 0.876342 GTGGATCCGGATCTGTTCGC 60.876 60.000 36.72 24.89 37.92 4.70
173 174 1.661821 GGATCCGGATCTGTTCGCG 60.662 63.158 36.72 0.00 37.92 5.87
174 175 1.661821 GATCCGGATCTGTTCGCGG 60.662 63.158 32.91 0.00 38.67 6.46
175 176 3.151958 ATCCGGATCTGTTCGCGGG 62.152 63.158 12.38 0.00 38.19 6.13
177 178 4.812476 CGGATCTGTTCGCGGGCA 62.812 66.667 6.13 4.67 0.00 5.36
178 179 2.892425 GGATCTGTTCGCGGGCAG 60.892 66.667 19.68 19.68 0.00 4.85
179 180 2.125512 GATCTGTTCGCGGGCAGT 60.126 61.111 22.91 14.28 34.57 4.40
180 181 2.434884 ATCTGTTCGCGGGCAGTG 60.435 61.111 22.91 7.07 34.57 3.66
181 182 3.958147 ATCTGTTCGCGGGCAGTGG 62.958 63.158 22.91 6.51 34.57 4.00
200 201 2.901042 GGGCTGTCCCGGTTCTAG 59.099 66.667 0.00 0.00 43.94 2.43
201 202 2.187163 GGCTGTCCCGGTTCTAGC 59.813 66.667 0.00 4.64 0.00 3.42
202 203 2.187163 GCTGTCCCGGTTCTAGCC 59.813 66.667 0.00 0.00 0.00 3.93
203 204 2.656069 GCTGTCCCGGTTCTAGCCA 61.656 63.158 0.00 0.00 0.00 4.75
204 205 1.218316 CTGTCCCGGTTCTAGCCAC 59.782 63.158 0.00 0.00 0.00 5.01
205 206 2.240162 CTGTCCCGGTTCTAGCCACC 62.240 65.000 0.00 1.61 0.00 4.61
206 207 2.120940 TCCCGGTTCTAGCCACCA 59.879 61.111 0.00 0.00 33.36 4.17
207 208 1.536907 TCCCGGTTCTAGCCACCAA 60.537 57.895 0.00 0.00 33.36 3.67
208 209 1.376812 CCCGGTTCTAGCCACCAAC 60.377 63.158 0.00 0.00 33.36 3.77
209 210 1.376812 CCGGTTCTAGCCACCAACC 60.377 63.158 10.59 6.09 36.91 3.77
210 211 4.296265 GGTTCTAGCCACCAACCG 57.704 61.111 6.14 0.00 34.04 4.44
211 212 1.376812 GGTTCTAGCCACCAACCGG 60.377 63.158 0.00 0.00 34.04 5.28
212 213 1.376812 GTTCTAGCCACCAACCGGG 60.377 63.158 6.32 0.00 44.81 5.73
213 214 1.536907 TTCTAGCCACCAACCGGGA 60.537 57.895 6.32 0.00 41.15 5.14
214 215 1.833787 TTCTAGCCACCAACCGGGAC 61.834 60.000 6.32 0.00 41.15 4.46
215 216 2.203877 TAGCCACCAACCGGGACT 60.204 61.111 6.32 0.00 41.15 3.85
216 217 2.521958 CTAGCCACCAACCGGGACTG 62.522 65.000 6.32 0.00 41.15 3.51
217 218 3.948719 GCCACCAACCGGGACTGA 61.949 66.667 6.32 0.00 41.15 3.41
218 219 2.833227 CCACCAACCGGGACTGAA 59.167 61.111 6.32 0.00 41.15 3.02
219 220 1.302511 CCACCAACCGGGACTGAAG 60.303 63.158 6.32 0.00 41.15 3.02
220 221 1.302511 CACCAACCGGGACTGAAGG 60.303 63.158 6.32 0.00 41.15 3.46
221 222 1.768888 ACCAACCGGGACTGAAGGT 60.769 57.895 6.32 0.00 41.15 3.50
222 223 1.302511 CCAACCGGGACTGAAGGTG 60.303 63.158 6.32 0.00 40.01 4.00
223 224 1.966451 CAACCGGGACTGAAGGTGC 60.966 63.158 6.32 0.00 38.44 5.01
224 225 2.147387 AACCGGGACTGAAGGTGCT 61.147 57.895 6.32 0.00 38.44 4.40
225 226 2.046892 CCGGGACTGAAGGTGCTG 60.047 66.667 0.00 0.00 41.49 4.41
226 227 2.046892 CGGGACTGAAGGTGCTGG 60.047 66.667 0.00 0.00 38.71 4.85
227 228 2.352805 GGGACTGAAGGTGCTGGG 59.647 66.667 0.00 0.00 36.48 4.45
228 229 2.360475 GGACTGAAGGTGCTGGGC 60.360 66.667 0.00 0.00 33.31 5.36
229 230 2.360475 GACTGAAGGTGCTGGGCC 60.360 66.667 0.00 0.00 0.00 5.80
230 231 3.177884 ACTGAAGGTGCTGGGCCA 61.178 61.111 5.85 5.85 0.00 5.36
231 232 2.360852 CTGAAGGTGCTGGGCCAG 60.361 66.667 29.44 29.44 34.12 4.85
232 233 3.933048 CTGAAGGTGCTGGGCCAGG 62.933 68.421 33.43 16.27 31.21 4.45
233 234 3.650950 GAAGGTGCTGGGCCAGGA 61.651 66.667 33.43 29.61 31.21 3.86
234 235 3.635268 GAAGGTGCTGGGCCAGGAG 62.635 68.421 33.43 11.48 31.31 3.69
245 246 3.801997 CCAGGAGCGAGGCCCATT 61.802 66.667 0.00 0.00 0.00 3.16
246 247 2.515523 CAGGAGCGAGGCCCATTG 60.516 66.667 0.00 0.00 0.00 2.82
247 248 3.801997 AGGAGCGAGGCCCATTGG 61.802 66.667 0.00 0.00 0.00 3.16
248 249 4.115199 GGAGCGAGGCCCATTGGT 62.115 66.667 0.00 0.00 0.00 3.67
249 250 2.514824 GAGCGAGGCCCATTGGTC 60.515 66.667 0.00 0.00 36.05 4.02
250 251 4.115199 AGCGAGGCCCATTGGTCC 62.115 66.667 0.00 0.00 36.69 4.46
252 253 4.856801 CGAGGCCCATTGGTCCCG 62.857 72.222 0.00 0.00 36.69 5.14
253 254 4.506255 GAGGCCCATTGGTCCCGG 62.506 72.222 0.00 0.00 36.69 5.73
255 256 4.376170 GGCCCATTGGTCCCGGTT 62.376 66.667 0.00 0.00 0.00 4.44
256 257 2.754254 GCCCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 0.00 3.62
257 258 2.437716 CCCATTGGTCCCGGTTCG 60.438 66.667 0.00 0.00 0.00 3.95
258 259 2.349755 CCATTGGTCCCGGTTCGT 59.650 61.111 0.00 0.00 0.00 3.85
259 260 2.038269 CCATTGGTCCCGGTTCGTG 61.038 63.158 0.00 0.00 0.00 4.35
260 261 1.302192 CATTGGTCCCGGTTCGTGT 60.302 57.895 0.00 0.00 0.00 4.49
261 262 1.004200 ATTGGTCCCGGTTCGTGTC 60.004 57.895 0.00 0.00 0.00 3.67
262 263 1.477685 ATTGGTCCCGGTTCGTGTCT 61.478 55.000 0.00 0.00 0.00 3.41
263 264 2.048503 GGTCCCGGTTCGTGTCTG 60.049 66.667 0.00 0.00 0.00 3.51
264 265 2.567497 GGTCCCGGTTCGTGTCTGA 61.567 63.158 0.00 0.00 0.00 3.27
265 266 1.364901 GTCCCGGTTCGTGTCTGAA 59.635 57.895 0.00 0.00 0.00 3.02
266 267 0.249573 GTCCCGGTTCGTGTCTGAAA 60.250 55.000 0.00 0.00 0.00 2.69
267 268 0.249573 TCCCGGTTCGTGTCTGAAAC 60.250 55.000 0.00 0.00 32.11 2.78
268 269 1.226030 CCCGGTTCGTGTCTGAAACC 61.226 60.000 0.00 0.00 31.73 3.27
269 270 1.554042 CCGGTTCGTGTCTGAAACCG 61.554 60.000 19.41 19.41 39.76 4.44
270 271 1.554042 CGGTTCGTGTCTGAAACCGG 61.554 60.000 18.86 0.00 38.11 5.28
271 272 1.226030 GGTTCGTGTCTGAAACCGGG 61.226 60.000 6.32 0.00 29.04 5.73
272 273 0.249573 GTTCGTGTCTGAAACCGGGA 60.250 55.000 6.32 0.00 0.00 5.14
273 274 0.249573 TTCGTGTCTGAAACCGGGAC 60.250 55.000 6.32 3.26 0.00 4.46
274 275 1.666872 CGTGTCTGAAACCGGGACC 60.667 63.158 6.32 0.00 0.00 4.46
275 276 1.448497 GTGTCTGAAACCGGGACCA 59.552 57.895 6.32 0.00 0.00 4.02
276 277 0.179040 GTGTCTGAAACCGGGACCAA 60.179 55.000 6.32 0.00 0.00 3.67
277 278 0.547075 TGTCTGAAACCGGGACCAAA 59.453 50.000 6.32 0.00 0.00 3.28
278 279 1.064611 TGTCTGAAACCGGGACCAAAA 60.065 47.619 6.32 0.00 0.00 2.44
279 280 1.607148 GTCTGAAACCGGGACCAAAAG 59.393 52.381 6.32 0.00 0.00 2.27
280 281 1.213430 TCTGAAACCGGGACCAAAAGT 59.787 47.619 6.32 0.00 0.00 2.66
281 282 1.336755 CTGAAACCGGGACCAAAAGTG 59.663 52.381 6.32 0.00 0.00 3.16
282 283 1.341187 TGAAACCGGGACCAAAAGTGT 60.341 47.619 6.32 0.00 0.00 3.55
283 284 1.335810 GAAACCGGGACCAAAAGTGTC 59.664 52.381 6.32 0.00 0.00 3.67
284 285 0.256464 AACCGGGACCAAAAGTGTCA 59.744 50.000 6.32 0.00 34.36 3.58
285 286 0.179029 ACCGGGACCAAAAGTGTCAG 60.179 55.000 6.32 0.00 34.36 3.51
286 287 0.107831 CCGGGACCAAAAGTGTCAGA 59.892 55.000 0.00 0.00 34.36 3.27
287 288 1.226746 CGGGACCAAAAGTGTCAGAC 58.773 55.000 0.00 0.00 34.36 3.51
288 289 1.474320 CGGGACCAAAAGTGTCAGACA 60.474 52.381 0.00 0.00 34.36 3.41
289 290 2.650322 GGGACCAAAAGTGTCAGACAA 58.350 47.619 4.32 0.00 34.36 3.18
290 291 3.020984 GGGACCAAAAGTGTCAGACAAA 58.979 45.455 4.32 0.00 34.36 2.83
291 292 3.636764 GGGACCAAAAGTGTCAGACAAAT 59.363 43.478 4.32 0.00 34.36 2.32
292 293 4.261614 GGGACCAAAAGTGTCAGACAAATC 60.262 45.833 4.32 0.00 34.36 2.17
293 294 4.527564 GACCAAAAGTGTCAGACAAATCG 58.472 43.478 4.32 0.00 32.91 3.34
294 295 3.315191 ACCAAAAGTGTCAGACAAATCGG 59.685 43.478 4.32 5.36 0.00 4.18
295 296 3.304659 CCAAAAGTGTCAGACAAATCGGG 60.305 47.826 4.32 1.17 0.00 5.14
296 297 3.485463 AAAGTGTCAGACAAATCGGGA 57.515 42.857 4.32 0.00 0.00 5.14
297 298 2.457366 AGTGTCAGACAAATCGGGAC 57.543 50.000 4.32 0.00 35.68 4.46
298 299 1.002087 AGTGTCAGACAAATCGGGACC 59.998 52.381 4.32 0.00 34.79 4.46
299 300 1.052617 TGTCAGACAAATCGGGACCA 58.947 50.000 0.00 0.00 34.79 4.02
300 301 1.418264 TGTCAGACAAATCGGGACCAA 59.582 47.619 0.00 0.00 34.79 3.67
301 302 2.039746 TGTCAGACAAATCGGGACCAAT 59.960 45.455 0.00 0.00 34.79 3.16
302 303 2.420022 GTCAGACAAATCGGGACCAATG 59.580 50.000 0.00 0.00 31.56 2.82
303 304 1.745087 CAGACAAATCGGGACCAATGG 59.255 52.381 0.00 0.00 0.00 3.16
304 305 0.455815 GACAAATCGGGACCAATGGC 59.544 55.000 0.00 0.00 0.00 4.40
305 306 0.970427 ACAAATCGGGACCAATGGCC 60.970 55.000 0.00 0.00 0.00 5.36
306 307 1.381191 AAATCGGGACCAATGGCCC 60.381 57.895 18.15 18.15 36.26 5.80
307 308 2.871795 AAATCGGGACCAATGGCCCC 62.872 60.000 14.32 14.32 36.25 5.80
309 310 4.374584 CGGGACCAATGGCCCCAA 62.375 66.667 23.71 0.00 40.13 4.12
310 311 2.121608 GGGACCAATGGCCCCAAA 59.878 61.111 19.51 0.00 39.89 3.28
311 312 1.989508 GGGACCAATGGCCCCAAAG 60.990 63.158 19.51 0.00 39.89 2.77
312 313 1.989508 GGACCAATGGCCCCAAAGG 60.990 63.158 0.00 6.80 39.47 3.11
339 340 3.499737 CGCCCTGGCATCACGAAC 61.500 66.667 9.17 0.00 42.06 3.95
340 341 3.134127 GCCCTGGCATCACGAACC 61.134 66.667 2.58 0.00 41.49 3.62
341 342 2.819595 CCCTGGCATCACGAACCG 60.820 66.667 0.00 0.00 0.00 4.44
342 343 2.819595 CCTGGCATCACGAACCGG 60.820 66.667 0.00 0.00 0.00 5.28
343 344 2.819595 CTGGCATCACGAACCGGG 60.820 66.667 6.32 0.00 0.00 5.73
344 345 3.309436 CTGGCATCACGAACCGGGA 62.309 63.158 6.32 0.00 45.56 5.14
345 346 2.818274 GGCATCACGAACCGGGAC 60.818 66.667 6.32 0.00 43.84 4.46
346 347 2.264794 GCATCACGAACCGGGACT 59.735 61.111 6.32 0.00 43.84 3.85
347 348 1.514087 GCATCACGAACCGGGACTA 59.486 57.895 6.32 0.00 43.84 2.59
348 349 0.108520 GCATCACGAACCGGGACTAA 60.109 55.000 6.32 0.00 43.84 2.24
349 350 1.472728 GCATCACGAACCGGGACTAAT 60.473 52.381 6.32 0.00 43.84 1.73
350 351 2.201732 CATCACGAACCGGGACTAATG 58.798 52.381 6.32 0.00 43.84 1.90
351 352 0.108520 TCACGAACCGGGACTAATGC 60.109 55.000 6.32 0.00 32.99 3.56
352 353 1.087771 CACGAACCGGGACTAATGCC 61.088 60.000 6.32 0.00 28.17 4.40
353 354 1.523032 CGAACCGGGACTAATGCCC 60.523 63.158 6.32 0.00 42.41 5.36
354 355 1.153025 GAACCGGGACTAATGCCCC 60.153 63.158 6.32 0.00 42.92 5.80
355 356 2.619941 GAACCGGGACTAATGCCCCC 62.620 65.000 6.32 0.00 42.92 5.40
356 357 2.772622 CCGGGACTAATGCCCCCT 60.773 66.667 0.00 0.00 42.92 4.79
357 358 2.383601 CCGGGACTAATGCCCCCTT 61.384 63.158 0.00 0.00 42.92 3.95
358 359 1.613061 CGGGACTAATGCCCCCTTT 59.387 57.895 0.00 0.00 42.92 3.11
359 360 0.751643 CGGGACTAATGCCCCCTTTG 60.752 60.000 0.00 0.00 42.92 2.77
360 361 0.397114 GGGACTAATGCCCCCTTTGG 60.397 60.000 0.00 0.00 39.81 3.28
361 362 0.335019 GGACTAATGCCCCCTTTGGT 59.665 55.000 0.00 0.00 0.00 3.67
362 363 1.685180 GGACTAATGCCCCCTTTGGTC 60.685 57.143 0.00 0.00 36.50 4.02
363 364 0.335019 ACTAATGCCCCCTTTGGTCC 59.665 55.000 0.00 0.00 0.00 4.46
364 365 0.397114 CTAATGCCCCCTTTGGTCCC 60.397 60.000 0.00 0.00 0.00 4.46
365 366 2.218115 TAATGCCCCCTTTGGTCCCG 62.218 60.000 0.00 0.00 0.00 5.14
368 369 3.586454 CCCCCTTTGGTCCCGGTT 61.586 66.667 0.00 0.00 0.00 4.44
369 370 2.035155 CCCCTTTGGTCCCGGTTC 59.965 66.667 0.00 0.00 0.00 3.62
370 371 2.836187 CCCCTTTGGTCCCGGTTCA 61.836 63.158 0.00 0.00 0.00 3.18
371 372 1.382629 CCCTTTGGTCCCGGTTCAT 59.617 57.895 0.00 0.00 0.00 2.57
372 373 0.965363 CCCTTTGGTCCCGGTTCATG 60.965 60.000 0.00 0.00 0.00 3.07
373 374 0.037590 CCTTTGGTCCCGGTTCATGA 59.962 55.000 0.00 0.00 0.00 3.07
374 375 1.453155 CTTTGGTCCCGGTTCATGAG 58.547 55.000 0.00 0.00 0.00 2.90
375 376 0.768622 TTTGGTCCCGGTTCATGAGT 59.231 50.000 0.00 0.00 0.00 3.41
376 377 0.036164 TTGGTCCCGGTTCATGAGTG 59.964 55.000 0.00 0.00 0.00 3.51
377 378 0.834261 TGGTCCCGGTTCATGAGTGA 60.834 55.000 0.00 0.00 0.00 3.41
378 379 0.323629 GGTCCCGGTTCATGAGTGAA 59.676 55.000 0.00 0.00 41.89 3.18
390 391 3.876914 TCATGAGTGAACCGGATTAATGC 59.123 43.478 9.46 0.00 0.00 3.56
391 392 2.639065 TGAGTGAACCGGATTAATGCC 58.361 47.619 9.46 0.00 0.00 4.40
392 393 1.947456 GAGTGAACCGGATTAATGCCC 59.053 52.381 9.46 0.00 0.00 5.36
393 394 1.564348 AGTGAACCGGATTAATGCCCT 59.436 47.619 9.46 0.00 0.00 5.19
394 395 2.025321 AGTGAACCGGATTAATGCCCTT 60.025 45.455 9.46 0.00 0.00 3.95
395 396 3.201266 AGTGAACCGGATTAATGCCCTTA 59.799 43.478 9.46 0.00 0.00 2.69
396 397 3.314357 GTGAACCGGATTAATGCCCTTAC 59.686 47.826 9.46 0.00 0.00 2.34
397 398 3.054287 TGAACCGGATTAATGCCCTTACA 60.054 43.478 9.46 0.00 0.00 2.41
398 399 2.927028 ACCGGATTAATGCCCTTACAC 58.073 47.619 9.46 0.00 0.00 2.90
399 400 2.240160 ACCGGATTAATGCCCTTACACA 59.760 45.455 9.46 0.00 0.00 3.72
400 401 2.878406 CCGGATTAATGCCCTTACACAG 59.122 50.000 0.00 0.00 0.00 3.66
401 402 2.878406 CGGATTAATGCCCTTACACAGG 59.122 50.000 0.90 0.00 43.49 4.00
406 407 3.077907 GCCCTTACACAGGCCTCA 58.922 61.111 0.00 0.00 43.76 3.86
407 408 1.378762 GCCCTTACACAGGCCTCAA 59.621 57.895 0.00 0.00 43.76 3.02
408 409 0.960861 GCCCTTACACAGGCCTCAAC 60.961 60.000 0.00 0.00 43.76 3.18
409 410 0.322546 CCCTTACACAGGCCTCAACC 60.323 60.000 0.00 0.00 42.29 3.77
410 411 0.400213 CCTTACACAGGCCTCAACCA 59.600 55.000 0.00 0.00 35.13 3.67
411 412 1.202879 CCTTACACAGGCCTCAACCAA 60.203 52.381 0.00 0.00 35.13 3.67
412 413 2.582052 CTTACACAGGCCTCAACCAAA 58.418 47.619 0.00 0.00 0.00 3.28
413 414 2.270352 TACACAGGCCTCAACCAAAG 57.730 50.000 0.00 0.00 0.00 2.77
414 415 1.109323 ACACAGGCCTCAACCAAAGC 61.109 55.000 0.00 0.00 0.00 3.51
415 416 1.531602 ACAGGCCTCAACCAAAGCC 60.532 57.895 0.00 0.00 46.13 4.35
417 418 2.118294 GGCCTCAACCAAAGCCCT 59.882 61.111 0.00 0.00 39.60 5.19
418 419 2.278330 GGCCTCAACCAAAGCCCTG 61.278 63.158 0.00 0.00 39.60 4.45
419 420 1.531602 GCCTCAACCAAAGCCCTGT 60.532 57.895 0.00 0.00 0.00 4.00
420 421 1.115326 GCCTCAACCAAAGCCCTGTT 61.115 55.000 0.00 0.00 0.00 3.16
421 422 1.413118 CCTCAACCAAAGCCCTGTTT 58.587 50.000 0.00 0.00 0.00 2.83
422 423 1.762370 CCTCAACCAAAGCCCTGTTTT 59.238 47.619 0.00 0.00 0.00 2.43
423 424 2.224042 CCTCAACCAAAGCCCTGTTTTC 60.224 50.000 0.00 0.00 0.00 2.29
424 425 2.695147 CTCAACCAAAGCCCTGTTTTCT 59.305 45.455 0.00 0.00 0.00 2.52
425 426 3.888930 CTCAACCAAAGCCCTGTTTTCTA 59.111 43.478 0.00 0.00 0.00 2.10
426 427 3.634910 TCAACCAAAGCCCTGTTTTCTAC 59.365 43.478 0.00 0.00 0.00 2.59
427 428 3.595190 ACCAAAGCCCTGTTTTCTACT 57.405 42.857 0.00 0.00 0.00 2.57
428 429 4.717279 ACCAAAGCCCTGTTTTCTACTA 57.283 40.909 0.00 0.00 0.00 1.82
429 430 4.652822 ACCAAAGCCCTGTTTTCTACTAG 58.347 43.478 0.00 0.00 0.00 2.57
430 431 4.104261 ACCAAAGCCCTGTTTTCTACTAGT 59.896 41.667 0.00 0.00 0.00 2.57
431 432 4.455877 CCAAAGCCCTGTTTTCTACTAGTG 59.544 45.833 5.39 0.00 0.00 2.74
432 433 4.976540 AAGCCCTGTTTTCTACTAGTGT 57.023 40.909 5.39 0.00 0.00 3.55
433 434 4.538746 AGCCCTGTTTTCTACTAGTGTC 57.461 45.455 5.39 0.00 0.00 3.67
434 435 3.261137 AGCCCTGTTTTCTACTAGTGTCC 59.739 47.826 5.39 0.00 0.00 4.02
435 436 3.261137 GCCCTGTTTTCTACTAGTGTCCT 59.739 47.826 5.39 0.00 0.00 3.85
436 437 4.465305 GCCCTGTTTTCTACTAGTGTCCTA 59.535 45.833 5.39 0.00 0.00 2.94
437 438 5.394333 GCCCTGTTTTCTACTAGTGTCCTAG 60.394 48.000 5.39 0.00 45.27 3.02
438 439 5.950549 CCCTGTTTTCTACTAGTGTCCTAGA 59.049 44.000 5.39 0.00 42.90 2.43
439 440 6.436532 CCCTGTTTTCTACTAGTGTCCTAGAA 59.563 42.308 5.39 3.17 42.90 2.10
440 441 7.363094 CCCTGTTTTCTACTAGTGTCCTAGAAG 60.363 44.444 5.39 0.00 42.90 2.85
441 442 7.393796 CCTGTTTTCTACTAGTGTCCTAGAAGA 59.606 40.741 5.39 0.00 42.90 2.87
442 443 8.338072 TGTTTTCTACTAGTGTCCTAGAAGAG 57.662 38.462 5.39 0.00 42.90 2.85
443 444 8.162085 TGTTTTCTACTAGTGTCCTAGAAGAGA 58.838 37.037 5.39 0.00 42.90 3.10
444 445 9.012161 GTTTTCTACTAGTGTCCTAGAAGAGAA 57.988 37.037 5.39 0.00 42.90 2.87
445 446 9.584008 TTTTCTACTAGTGTCCTAGAAGAGAAA 57.416 33.333 5.39 5.90 42.90 2.52
446 447 9.584008 TTTCTACTAGTGTCCTAGAAGAGAAAA 57.416 33.333 5.39 0.00 42.90 2.29
447 448 9.584008 TTCTACTAGTGTCCTAGAAGAGAAAAA 57.416 33.333 5.39 0.00 42.90 1.94
466 467 4.776795 AAAAATACATTCACGGGTGGTC 57.223 40.909 0.00 0.00 0.00 4.02
467 468 3.426787 AAATACATTCACGGGTGGTCA 57.573 42.857 0.00 0.00 0.00 4.02
468 469 2.691409 ATACATTCACGGGTGGTCAG 57.309 50.000 0.00 0.00 0.00 3.51
469 470 0.611200 TACATTCACGGGTGGTCAGG 59.389 55.000 0.00 0.00 0.00 3.86
470 471 1.374947 CATTCACGGGTGGTCAGGT 59.625 57.895 0.00 0.00 0.00 4.00
471 472 0.611200 CATTCACGGGTGGTCAGGTA 59.389 55.000 0.00 0.00 0.00 3.08
472 473 1.209504 CATTCACGGGTGGTCAGGTAT 59.790 52.381 0.00 0.00 0.00 2.73
510 513 5.229887 CCGAATTAACCAAGCGAAAATGATG 59.770 40.000 0.00 0.00 0.00 3.07
511 514 6.027131 CGAATTAACCAAGCGAAAATGATGA 58.973 36.000 0.00 0.00 0.00 2.92
514 517 8.776376 AATTAACCAAGCGAAAATGATGAATT 57.224 26.923 0.00 0.00 0.00 2.17
520 523 4.669318 AGCGAAAATGATGAATTCAGCAG 58.331 39.130 28.21 16.79 46.01 4.24
530 533 5.585047 TGATGAATTCAGCAGATGAGAACTG 59.415 40.000 21.91 0.00 37.34 3.16
544 551 5.596836 TGAGAACTGCATTTGTTTTCCTT 57.403 34.783 0.00 0.00 30.49 3.36
561 568 2.573462 TCCTTCCCTTGATCTTCACAGG 59.427 50.000 0.00 0.00 0.00 4.00
562 569 2.363683 CTTCCCTTGATCTTCACAGGC 58.636 52.381 0.00 0.00 0.00 4.85
563 570 1.661463 TCCCTTGATCTTCACAGGCT 58.339 50.000 0.00 0.00 0.00 4.58
564 571 1.556911 TCCCTTGATCTTCACAGGCTC 59.443 52.381 0.00 0.00 0.00 4.70
566 573 2.354259 CCTTGATCTTCACAGGCTCAC 58.646 52.381 0.00 0.00 0.00 3.51
567 574 2.289882 CCTTGATCTTCACAGGCTCACA 60.290 50.000 0.00 0.00 0.00 3.58
568 575 2.756840 TGATCTTCACAGGCTCACAG 57.243 50.000 0.00 0.00 0.00 3.66
569 576 1.338484 TGATCTTCACAGGCTCACAGC 60.338 52.381 0.00 0.00 41.46 4.40
570 577 0.689055 ATCTTCACAGGCTCACAGCA 59.311 50.000 0.00 0.00 44.75 4.41
571 578 0.469494 TCTTCACAGGCTCACAGCAA 59.531 50.000 0.00 0.00 44.75 3.91
572 579 0.873054 CTTCACAGGCTCACAGCAAG 59.127 55.000 0.00 0.00 44.75 4.01
573 580 0.469494 TTCACAGGCTCACAGCAAGA 59.531 50.000 0.00 0.00 44.75 3.02
574 581 0.034476 TCACAGGCTCACAGCAAGAG 59.966 55.000 0.00 0.00 44.75 2.85
583 590 2.997899 ACAGCAAGAGCAGTGACAC 58.002 52.632 0.00 0.00 45.49 3.67
584 591 0.178767 ACAGCAAGAGCAGTGACACA 59.821 50.000 8.59 0.00 45.49 3.72
585 592 0.866427 CAGCAAGAGCAGTGACACAG 59.134 55.000 8.59 0.12 45.49 3.66
588 595 1.807755 GCAAGAGCAGTGACACAGACA 60.808 52.381 8.59 0.00 41.58 3.41
589 596 1.863454 CAAGAGCAGTGACACAGACAC 59.137 52.381 8.59 0.00 38.38 3.67
590 597 1.114627 AGAGCAGTGACACAGACACA 58.885 50.000 8.59 0.00 40.25 3.72
591 598 1.690893 AGAGCAGTGACACAGACACAT 59.309 47.619 8.59 0.00 40.25 3.21
592 599 2.893489 AGAGCAGTGACACAGACACATA 59.107 45.455 8.59 0.00 40.25 2.29
593 600 2.989840 GAGCAGTGACACAGACACATAC 59.010 50.000 8.59 0.00 40.25 2.39
594 601 2.630098 AGCAGTGACACAGACACATACT 59.370 45.455 8.59 0.00 40.25 2.12
595 602 2.733552 GCAGTGACACAGACACATACTG 59.266 50.000 8.59 0.00 40.25 2.74
596 603 3.552890 GCAGTGACACAGACACATACTGA 60.553 47.826 8.59 0.00 40.25 3.41
597 604 4.814147 CAGTGACACAGACACATACTGAT 58.186 43.478 8.59 0.00 40.25 2.90
599 606 6.567959 CAGTGACACAGACACATACTGATAT 58.432 40.000 8.59 0.00 40.25 1.63
600 607 7.682021 GCAGTGACACAGACACATACTGATATA 60.682 40.741 8.59 0.00 40.25 0.86
601 608 7.645735 CAGTGACACAGACACATACTGATATAC 59.354 40.741 8.59 0.00 40.25 1.47
614 632 3.389329 ACTGATATACCTTCACAGCCCAG 59.611 47.826 0.00 0.00 32.67 4.45
625 643 2.933834 AGCCCAGTTAACCGGCCT 60.934 61.111 23.95 7.99 44.13 5.19
628 646 1.907222 GCCCAGTTAACCGGCCTAGT 61.907 60.000 19.21 0.00 36.63 2.57
629 647 1.488390 CCCAGTTAACCGGCCTAGTA 58.512 55.000 0.00 0.00 0.00 1.82
630 648 2.044758 CCCAGTTAACCGGCCTAGTAT 58.955 52.381 0.00 0.00 0.00 2.12
631 649 3.233507 CCCAGTTAACCGGCCTAGTATA 58.766 50.000 0.00 0.00 0.00 1.47
632 650 3.006217 CCCAGTTAACCGGCCTAGTATAC 59.994 52.174 0.00 0.00 0.00 1.47
633 651 3.893813 CCAGTTAACCGGCCTAGTATACT 59.106 47.826 10.87 10.87 0.00 2.12
634 652 5.072741 CCAGTTAACCGGCCTAGTATACTA 58.927 45.833 12.05 12.05 0.00 1.82
635 653 5.048434 CCAGTTAACCGGCCTAGTATACTAC 60.048 48.000 8.59 0.53 0.00 2.73
636 654 5.532406 CAGTTAACCGGCCTAGTATACTACA 59.468 44.000 8.59 0.00 0.00 2.74
664 684 1.308998 CGGCCCATAACTTCATGGTC 58.691 55.000 0.00 0.00 43.49 4.02
727 759 3.763097 TGCACGCAATAAATTCTGGAG 57.237 42.857 0.00 0.00 0.00 3.86
773 805 0.586010 GCGCGTACAGTACTCGTCTC 60.586 60.000 21.06 4.61 38.96 3.36
786 818 5.661759 AGTACTCGTCTCCCCAAGAATTTAT 59.338 40.000 0.00 0.00 35.21 1.40
791 823 3.312697 GTCTCCCCAAGAATTTATGCGTC 59.687 47.826 0.00 0.00 35.21 5.19
810 853 3.599514 CGTCCAAAGTAGTAACGTACGTG 59.400 47.826 23.57 5.69 0.00 4.49
865 913 1.656095 CTGATTTGGCGTCGAGAAGAC 59.344 52.381 0.00 0.00 46.16 3.01
877 925 5.489011 GTCGAGAAGACGAAGAAGAAAAG 57.511 43.478 0.00 0.00 43.75 2.27
895 945 7.098074 AGAAAAGGAAAAGCATCATCTCATC 57.902 36.000 0.00 0.00 0.00 2.92
896 946 5.848833 AAAGGAAAAGCATCATCTCATCC 57.151 39.130 0.00 0.00 0.00 3.51
913 963 5.246656 TCTCATCCTAACGGAGGTAAAACAA 59.753 40.000 5.62 0.00 46.76 2.83
914 964 6.057321 TCATCCTAACGGAGGTAAAACAAT 57.943 37.500 5.62 0.00 46.76 2.71
915 965 5.878116 TCATCCTAACGGAGGTAAAACAATG 59.122 40.000 5.62 1.49 46.76 2.82
949 1009 4.299978 GTCGGATACCTACAAATCTGAGC 58.700 47.826 0.00 0.00 38.00 4.26
950 1010 3.958147 TCGGATACCTACAAATCTGAGCA 59.042 43.478 0.00 0.00 33.55 4.26
951 1011 4.051922 CGGATACCTACAAATCTGAGCAC 58.948 47.826 0.00 0.00 31.30 4.40
952 1012 4.051922 GGATACCTACAAATCTGAGCACG 58.948 47.826 0.00 0.00 0.00 5.34
953 1013 4.441634 GGATACCTACAAATCTGAGCACGT 60.442 45.833 0.00 0.00 0.00 4.49
954 1014 5.221185 GGATACCTACAAATCTGAGCACGTA 60.221 44.000 0.00 0.00 0.00 3.57
955 1015 3.846360 ACCTACAAATCTGAGCACGTAC 58.154 45.455 0.00 0.00 0.00 3.67
994 1066 4.570663 GTACCGCCGCATCGCTCT 62.571 66.667 0.00 0.00 0.00 4.09
995 1067 4.266070 TACCGCCGCATCGCTCTC 62.266 66.667 0.00 0.00 0.00 3.20
1205 1298 0.470080 TCCGTCTCCATCCATCCTCC 60.470 60.000 0.00 0.00 0.00 4.30
1206 1299 0.470833 CCGTCTCCATCCATCCTCCT 60.471 60.000 0.00 0.00 0.00 3.69
1207 1300 0.965439 CGTCTCCATCCATCCTCCTC 59.035 60.000 0.00 0.00 0.00 3.71
1259 1352 2.444256 CCCTTCCTCCCCGATCCAC 61.444 68.421 0.00 0.00 0.00 4.02
1266 1359 1.729470 CTCCCCGATCCACTCGTCTG 61.729 65.000 0.00 0.00 46.18 3.51
1296 1389 4.821589 CCGCCGACCAGAGCTTCC 62.822 72.222 0.00 0.00 0.00 3.46
1534 1627 2.388232 GGTTTCCGCGTCGCTGAAT 61.388 57.895 22.13 0.00 32.41 2.57
1535 1628 1.079875 GGTTTCCGCGTCGCTGAATA 61.080 55.000 22.13 11.92 32.41 1.75
1536 1629 0.717224 GTTTCCGCGTCGCTGAATAA 59.283 50.000 22.13 8.09 32.41 1.40
1591 1688 0.327924 TCCCAGGACGCAACATGATT 59.672 50.000 0.00 0.00 0.00 2.57
1642 1739 3.347590 TCCTCCTCCTCCTCCGCA 61.348 66.667 0.00 0.00 0.00 5.69
1686 1783 6.439058 ACTTACTTAATCTTCTGCACCTCTCT 59.561 38.462 0.00 0.00 0.00 3.10
1742 1869 9.997172 ATGGAAGAGTTTTATTATTCCCTTTCT 57.003 29.630 0.00 0.00 38.93 2.52
1755 1882 0.102120 CCTTTCTTTGTTGCCGCACA 59.898 50.000 0.00 0.00 0.00 4.57
1788 1921 6.183360 GGTTTTGCATCAAACAGGAAACAAAT 60.183 34.615 14.30 0.00 32.79 2.32
1789 1922 6.998968 TTTGCATCAAACAGGAAACAAATT 57.001 29.167 0.00 0.00 0.00 1.82
1796 1929 5.754406 TCAAACAGGAAACAAATTGAGCATG 59.246 36.000 0.00 0.00 0.00 4.06
1858 1991 8.236586 TCATGCACAATCAAATCTGTACTTAAC 58.763 33.333 0.00 0.00 0.00 2.01
1894 2027 7.487189 GCACTTGCTAGTAGTAGTATTTTCGAA 59.513 37.037 0.00 0.00 38.21 3.71
2032 2170 4.481930 TGTGCAACATTTAAGTTCCTCG 57.518 40.909 0.00 0.00 45.67 4.63
2033 2171 3.234386 GTGCAACATTTAAGTTCCTCGC 58.766 45.455 0.00 0.00 36.32 5.03
2034 2172 3.058224 GTGCAACATTTAAGTTCCTCGCT 60.058 43.478 0.00 0.00 36.32 4.93
2137 2275 8.567285 AACCTGAGAAATGAAACGAAAGATAT 57.433 30.769 0.00 0.00 0.00 1.63
2150 2288 9.746711 GAAACGAAAGATATATACATCATGCAC 57.253 33.333 0.00 0.00 0.00 4.57
2151 2289 8.831715 AACGAAAGATATATACATCATGCACA 57.168 30.769 0.00 0.00 0.00 4.57
2153 2291 7.872483 ACGAAAGATATATACATCATGCACACA 59.128 33.333 0.00 0.00 0.00 3.72
2154 2292 8.876790 CGAAAGATATATACATCATGCACACAT 58.123 33.333 0.00 0.00 36.79 3.21
2185 2323 1.604593 GGTGCCTGCACTTGGATGT 60.605 57.895 20.52 0.00 45.52 3.06
2228 2366 3.950395 CTCCTTTATTTCTCAAGCTGGGG 59.050 47.826 0.00 0.00 0.00 4.96
2230 2368 4.089361 CCTTTATTTCTCAAGCTGGGGTT 58.911 43.478 0.00 0.00 0.00 4.11
2233 2371 0.178964 TTTCTCAAGCTGGGGTTGGG 60.179 55.000 9.13 6.35 42.15 4.12
2234 2372 2.677875 CTCAAGCTGGGGTTGGGC 60.678 66.667 9.13 0.00 40.81 5.36
2235 2373 4.299796 TCAAGCTGGGGTTGGGCC 62.300 66.667 0.00 0.00 40.81 5.80
2237 2375 4.305956 AAGCTGGGGTTGGGCCTG 62.306 66.667 4.53 0.00 37.43 4.85
2322 2469 0.681175 ACCAAATTTCCCAGCAGTGC 59.319 50.000 7.13 7.13 0.00 4.40
2369 2519 9.236691 GTACTCCATGTGTGCAATTAATATTTG 57.763 33.333 0.00 0.00 0.00 2.32
2376 2526 9.723601 ATGTGTGCAATTAATATTTGGTTTCTT 57.276 25.926 0.00 0.00 0.00 2.52
2406 2560 6.829229 TTATCTCCACTCTAACTCGTTTCA 57.171 37.500 0.00 0.00 0.00 2.69
2417 2571 1.337071 ACTCGTTTCAGAACTCTCGCA 59.663 47.619 0.00 0.00 33.51 5.10
2425 2579 4.732285 TCAGAACTCTCGCATTTCAAAC 57.268 40.909 0.00 0.00 0.00 2.93
2426 2580 4.380531 TCAGAACTCTCGCATTTCAAACT 58.619 39.130 0.00 0.00 0.00 2.66
2428 2582 3.430218 AGAACTCTCGCATTTCAAACTCG 59.570 43.478 0.00 0.00 0.00 4.18
2429 2583 2.069273 ACTCTCGCATTTCAAACTCGG 58.931 47.619 0.00 0.00 0.00 4.63
2430 2584 2.069273 CTCTCGCATTTCAAACTCGGT 58.931 47.619 0.00 0.00 0.00 4.69
2431 2585 2.480419 CTCTCGCATTTCAAACTCGGTT 59.520 45.455 0.00 0.00 0.00 4.44
2560 2784 8.800370 TCCATGTGCAATTTATACTGTTTCTA 57.200 30.769 0.00 0.00 0.00 2.10
2653 2877 4.261197 CCCAACTTTCTGTTCAGCAAGTAC 60.261 45.833 15.50 0.00 36.63 2.73
2656 2880 6.292919 CCAACTTTCTGTTCAGCAAGTACTAC 60.293 42.308 15.50 0.00 36.63 2.73
2675 2899 8.893727 AGTACTACAAATTTGCAGGTCAATATC 58.106 33.333 20.06 4.27 34.12 1.63
2719 2948 4.040376 GCTAGCTGCAGCATGTTAATTTC 58.960 43.478 38.24 12.79 45.16 2.17
2721 2950 4.796038 AGCTGCAGCATGTTAATTTCTT 57.204 36.364 38.24 11.97 45.16 2.52
2729 2958 6.091713 GCAGCATGTTAATTTCTTCAATTGCT 59.908 34.615 0.00 0.00 39.31 3.91
2742 2972 6.690530 TCTTCAATTGCTTCCCACAATTAAG 58.309 36.000 0.00 6.70 43.94 1.85
2977 3252 2.480416 GGAGATGAGCAAGTCAGGTACG 60.480 54.545 0.00 0.00 39.07 3.67
2980 3255 0.541063 TGAGCAAGTCAGGTACGGGA 60.541 55.000 0.00 0.00 0.00 5.14
3073 3354 2.595009 ATCCCCGGAAGAAGAAGCGC 62.595 60.000 0.73 0.00 0.00 5.92
3257 3538 3.251487 ACGTAACCAAAAACCTTCATCCG 59.749 43.478 0.00 0.00 0.00 4.18
3260 3541 2.235891 ACCAAAAACCTTCATCCGTCC 58.764 47.619 0.00 0.00 0.00 4.79
3261 3542 2.235016 CCAAAAACCTTCATCCGTCCA 58.765 47.619 0.00 0.00 0.00 4.02
3263 3544 2.200373 AAAACCTTCATCCGTCCAGG 57.800 50.000 0.00 0.00 42.97 4.45
3264 3545 0.328258 AAACCTTCATCCGTCCAGGG 59.672 55.000 0.00 0.00 41.52 4.45
3266 3547 1.265454 ACCTTCATCCGTCCAGGGTC 61.265 60.000 0.00 0.00 41.52 4.46
3267 3548 1.522569 CTTCATCCGTCCAGGGTCC 59.477 63.158 0.00 0.00 41.52 4.46
3268 3549 1.229368 TTCATCCGTCCAGGGTCCA 60.229 57.895 0.00 0.00 41.52 4.02
3269 3550 0.620410 TTCATCCGTCCAGGGTCCAT 60.620 55.000 0.00 0.00 41.52 3.41
3271 3552 1.766461 ATCCGTCCAGGGTCCATCC 60.766 63.158 0.00 0.00 41.52 3.51
3272 3553 2.545550 ATCCGTCCAGGGTCCATCCA 62.546 60.000 0.00 0.00 41.52 3.41
3274 3555 1.146930 CGTCCAGGGTCCATCCATG 59.853 63.158 0.00 0.00 46.30 3.66
3277 3558 1.454479 CCAGGGTCCATCCATGCAC 60.454 63.158 0.00 0.00 45.50 4.57
3278 3559 1.820906 CAGGGTCCATCCATGCACG 60.821 63.158 0.00 0.00 41.13 5.34
3279 3560 1.995066 AGGGTCCATCCATGCACGA 60.995 57.895 0.00 0.00 38.11 4.35
3290 3571 1.268625 CCATGCACGATCCATTCCATG 59.731 52.381 0.00 0.00 0.00 3.66
3831 4112 2.034607 GCTCGGCGAAGAGGAGTAT 58.965 57.895 12.13 0.00 38.63 2.12
3936 4217 1.733399 GAACCACGTCAGCCTCGTC 60.733 63.158 0.00 0.00 39.55 4.20
4080 4361 1.375853 CCGCCGAATTTCAGATGCCA 61.376 55.000 0.00 0.00 0.00 4.92
4086 4367 0.664761 AATTTCAGATGCCATCGCCG 59.335 50.000 0.00 0.00 0.00 6.46
4393 4677 3.921767 CTGAAGCGGCAGTGCGAGA 62.922 63.158 9.45 0.00 40.67 4.04
4527 4811 3.681835 GGGGTGACTGCGTCGACT 61.682 66.667 14.70 0.00 34.95 4.18
4557 4841 2.983930 GACGACGCTCTCTGGCAGT 61.984 63.158 15.27 0.00 0.00 4.40
4856 5145 6.238842 CCATTATTACTGCCTCCTGTTTCATG 60.239 42.308 0.00 0.00 0.00 3.07
5140 5441 4.477975 CTCGTCGACTCCGTGCCC 62.478 72.222 14.70 0.00 37.05 5.36
5188 5489 0.606401 CCACCGTCAACAGCCTCATT 60.606 55.000 0.00 0.00 0.00 2.57
5191 5492 1.503542 CGTCAACAGCCTCATTGCC 59.496 57.895 0.00 0.00 0.00 4.52
5304 5605 4.035558 TCGTACGCAATGGTAAGTAGTAGG 59.964 45.833 11.24 0.00 0.00 3.18
5314 5615 5.316167 TGGTAAGTAGTAGGTCAAGAACGA 58.684 41.667 0.00 0.00 0.00 3.85
5358 5659 9.674824 CTATAAAATGACTGGAATTGCTGATTC 57.325 33.333 10.76 5.21 42.84 2.52
5363 5664 5.614308 TGACTGGAATTGCTGATTCGATAT 58.386 37.500 10.76 0.00 44.21 1.63
5381 5683 9.801873 ATTCGATATCATTTTACTTGGTTTTGG 57.198 29.630 3.12 0.00 0.00 3.28
5538 5840 6.378280 TGCATAATCCCCTTTCTTTCTTCTTC 59.622 38.462 0.00 0.00 0.00 2.87
5568 5870 1.152599 CCAATCACCACCACCACCA 59.847 57.895 0.00 0.00 0.00 4.17
5569 5871 1.178534 CCAATCACCACCACCACCAC 61.179 60.000 0.00 0.00 0.00 4.16
5570 5872 1.152830 AATCACCACCACCACCACC 59.847 57.895 0.00 0.00 0.00 4.61
5571 5873 1.650242 AATCACCACCACCACCACCA 61.650 55.000 0.00 0.00 0.00 4.17
5572 5874 2.351924 ATCACCACCACCACCACCAC 62.352 60.000 0.00 0.00 0.00 4.16
5573 5875 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
5577 5879 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
5597 5899 3.444742 CCACAAGCACAACACCATCATAT 59.555 43.478 0.00 0.00 0.00 1.78
5598 5900 4.639755 CCACAAGCACAACACCATCATATA 59.360 41.667 0.00 0.00 0.00 0.86
5599 5901 5.300034 CCACAAGCACAACACCATCATATAT 59.700 40.000 0.00 0.00 0.00 0.86
5600 5902 6.432936 CACAAGCACAACACCATCATATATC 58.567 40.000 0.00 0.00 0.00 1.63
5664 5966 4.161754 TCCTATGATCATGGCTGCAGATAG 59.838 45.833 20.43 12.32 0.00 2.08
5714 6016 7.224949 GCTCTGAGTTGTGTTTCTTAGTTAACT 59.775 37.037 13.68 13.68 0.00 2.24
5782 6084 6.429521 AGTAGACTAAGCACAAACCCTTTA 57.570 37.500 0.00 0.00 0.00 1.85
5793 6095 7.758495 AGCACAAACCCTTTATCTTAATTACG 58.242 34.615 0.00 0.00 0.00 3.18
5795 6097 8.024865 GCACAAACCCTTTATCTTAATTACGTT 58.975 33.333 0.00 0.00 0.00 3.99
5828 6130 3.248266 GCCATGACAAATTCAGAAGCAC 58.752 45.455 0.00 0.00 37.77 4.40
5900 6206 5.063880 TCTTTTAGTTTTCTGTCTCTGGGC 58.936 41.667 0.00 0.00 0.00 5.36
6011 6318 2.697751 GTGTAGTGCTCCATCCATCTCT 59.302 50.000 0.00 0.00 0.00 3.10
6108 6415 5.484998 ACCTACTTTTTGCATCCATCCATTT 59.515 36.000 0.00 0.00 0.00 2.32
6119 6429 1.338973 CCATCCATTTCAATCGGCTGG 59.661 52.381 0.00 0.00 30.24 4.85
6132 6442 2.865079 TCGGCTGGGTTGTTTGATTTA 58.135 42.857 0.00 0.00 0.00 1.40
6133 6443 3.426615 TCGGCTGGGTTGTTTGATTTAT 58.573 40.909 0.00 0.00 0.00 1.40
6162 6474 9.927668 TTTCTTGTCCCTTGATTTGATAAAATC 57.072 29.630 8.44 8.44 39.11 2.17
6200 6512 7.169645 CAGAGAAACAACCAACATACCATTTTG 59.830 37.037 0.00 0.00 0.00 2.44
6201 6513 7.069331 AGAGAAACAACCAACATACCATTTTGA 59.931 33.333 0.00 0.00 0.00 2.69
6202 6514 7.734942 AGAAACAACCAACATACCATTTTGAT 58.265 30.769 0.00 0.00 0.00 2.57
6203 6515 8.865090 AGAAACAACCAACATACCATTTTGATA 58.135 29.630 0.00 0.00 0.00 2.15
6204 6516 8.825667 AAACAACCAACATACCATTTTGATAC 57.174 30.769 0.00 0.00 0.00 2.24
6205 6517 7.531857 ACAACCAACATACCATTTTGATACA 57.468 32.000 0.00 0.00 0.00 2.29
6211 6526 7.336679 CCAACATACCATTTTGATACAGTCTGA 59.663 37.037 6.91 0.00 0.00 3.27
6247 6562 4.537135 TTCAGCTCTGAAGGACGTAAAT 57.463 40.909 8.14 0.00 43.90 1.40
6248 6563 3.849911 TCAGCTCTGAAGGACGTAAATG 58.150 45.455 0.00 0.00 36.53 2.32
6249 6564 3.509967 TCAGCTCTGAAGGACGTAAATGA 59.490 43.478 0.00 0.00 36.53 2.57
6250 6565 4.160439 TCAGCTCTGAAGGACGTAAATGAT 59.840 41.667 0.00 0.00 36.53 2.45
6251 6566 4.505922 CAGCTCTGAAGGACGTAAATGATC 59.494 45.833 0.00 0.00 0.00 2.92
6252 6567 4.404073 AGCTCTGAAGGACGTAAATGATCT 59.596 41.667 0.00 0.00 0.00 2.75
6253 6568 5.105146 AGCTCTGAAGGACGTAAATGATCTT 60.105 40.000 0.00 0.00 0.00 2.40
6254 6569 5.582665 GCTCTGAAGGACGTAAATGATCTTT 59.417 40.000 0.00 0.00 0.00 2.52
6255 6570 6.092807 GCTCTGAAGGACGTAAATGATCTTTT 59.907 38.462 10.98 10.98 0.00 2.27
6256 6571 7.361286 GCTCTGAAGGACGTAAATGATCTTTTT 60.361 37.037 11.41 5.81 0.00 1.94
6257 6572 8.029642 TCTGAAGGACGTAAATGATCTTTTTC 57.970 34.615 11.41 6.32 0.00 2.29
6258 6573 7.659799 TCTGAAGGACGTAAATGATCTTTTTCA 59.340 33.333 11.41 6.94 0.00 2.69
6259 6574 8.335532 TGAAGGACGTAAATGATCTTTTTCAT 57.664 30.769 11.41 0.00 37.96 2.57
6260 6575 8.792633 TGAAGGACGTAAATGATCTTTTTCATT 58.207 29.630 11.41 7.60 45.85 2.57
6314 6629 9.834628 TCATCGGAAGTATAAAACATTTCAAAC 57.165 29.630 0.00 0.00 0.00 2.93
6315 6630 9.619316 CATCGGAAGTATAAAACATTTCAAACA 57.381 29.630 0.00 0.00 0.00 2.83
6344 6659 7.745620 AAAAATTATATCGAGGTCCATGGAC 57.254 36.000 33.14 33.14 43.87 4.02
6352 6667 4.296265 GTCCATGGACCACCGAAC 57.704 61.111 31.37 6.91 39.08 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.043710 ACTCCATTTTCCTCAAGAGTTGTATAG 58.956 37.037 0.00 0.00 30.65 1.31
1 2 7.918076 ACTCCATTTTCCTCAAGAGTTGTATA 58.082 34.615 0.00 0.00 30.65 1.47
2 3 6.784031 ACTCCATTTTCCTCAAGAGTTGTAT 58.216 36.000 0.00 0.00 30.65 2.29
3 4 6.187727 ACTCCATTTTCCTCAAGAGTTGTA 57.812 37.500 0.00 0.00 30.65 2.41
4 5 5.053978 ACTCCATTTTCCTCAAGAGTTGT 57.946 39.130 0.00 0.00 30.65 3.32
5 6 6.211515 CAAACTCCATTTTCCTCAAGAGTTG 58.788 40.000 4.15 0.00 42.18 3.16
6 7 5.302823 CCAAACTCCATTTTCCTCAAGAGTT 59.697 40.000 0.00 0.00 44.23 3.01
7 8 4.829492 CCAAACTCCATTTTCCTCAAGAGT 59.171 41.667 0.00 0.00 36.17 3.24
8 9 5.048434 GTCCAAACTCCATTTTCCTCAAGAG 60.048 44.000 0.00 0.00 0.00 2.85
9 10 4.827284 GTCCAAACTCCATTTTCCTCAAGA 59.173 41.667 0.00 0.00 0.00 3.02
10 11 4.584325 TGTCCAAACTCCATTTTCCTCAAG 59.416 41.667 0.00 0.00 0.00 3.02
11 12 4.541705 TGTCCAAACTCCATTTTCCTCAA 58.458 39.130 0.00 0.00 0.00 3.02
12 13 4.177537 TGTCCAAACTCCATTTTCCTCA 57.822 40.909 0.00 0.00 0.00 3.86
13 14 4.021981 CCTTGTCCAAACTCCATTTTCCTC 60.022 45.833 0.00 0.00 0.00 3.71
14 15 3.897505 CCTTGTCCAAACTCCATTTTCCT 59.102 43.478 0.00 0.00 0.00 3.36
15 16 3.895041 TCCTTGTCCAAACTCCATTTTCC 59.105 43.478 0.00 0.00 0.00 3.13
16 17 4.559502 GCTCCTTGTCCAAACTCCATTTTC 60.560 45.833 0.00 0.00 0.00 2.29
17 18 3.321968 GCTCCTTGTCCAAACTCCATTTT 59.678 43.478 0.00 0.00 0.00 1.82
18 19 2.893489 GCTCCTTGTCCAAACTCCATTT 59.107 45.455 0.00 0.00 0.00 2.32
19 20 2.108952 AGCTCCTTGTCCAAACTCCATT 59.891 45.455 0.00 0.00 0.00 3.16
20 21 1.707427 AGCTCCTTGTCCAAACTCCAT 59.293 47.619 0.00 0.00 0.00 3.41
21 22 1.140312 AGCTCCTTGTCCAAACTCCA 58.860 50.000 0.00 0.00 0.00 3.86
22 23 1.882623 CAAGCTCCTTGTCCAAACTCC 59.117 52.381 0.00 0.00 36.79 3.85
23 24 1.882623 CCAAGCTCCTTGTCCAAACTC 59.117 52.381 4.48 0.00 39.58 3.01
24 25 1.494721 TCCAAGCTCCTTGTCCAAACT 59.505 47.619 4.48 0.00 39.58 2.66
25 26 1.882623 CTCCAAGCTCCTTGTCCAAAC 59.117 52.381 4.48 0.00 39.58 2.93
26 27 1.774254 TCTCCAAGCTCCTTGTCCAAA 59.226 47.619 4.48 0.00 39.58 3.28
27 28 1.349026 CTCTCCAAGCTCCTTGTCCAA 59.651 52.381 4.48 0.00 39.58 3.53
28 29 0.979665 CTCTCCAAGCTCCTTGTCCA 59.020 55.000 4.48 0.00 39.58 4.02
29 30 0.251634 CCTCTCCAAGCTCCTTGTCC 59.748 60.000 4.48 0.00 39.58 4.02
30 31 1.206849 CTCCTCTCCAAGCTCCTTGTC 59.793 57.143 4.48 0.00 39.58 3.18
31 32 1.203237 TCTCCTCTCCAAGCTCCTTGT 60.203 52.381 4.48 0.00 39.58 3.16
32 33 1.566211 TCTCCTCTCCAAGCTCCTTG 58.434 55.000 0.00 0.00 40.75 3.61
33 34 2.334006 TTCTCCTCTCCAAGCTCCTT 57.666 50.000 0.00 0.00 0.00 3.36
34 35 2.187100 CTTTCTCCTCTCCAAGCTCCT 58.813 52.381 0.00 0.00 0.00 3.69
35 36 1.406751 GCTTTCTCCTCTCCAAGCTCC 60.407 57.143 0.00 0.00 38.89 4.70
36 37 2.022764 GCTTTCTCCTCTCCAAGCTC 57.977 55.000 0.00 0.00 38.89 4.09
37 38 1.655372 AGCTTTCTCCTCTCCAAGCT 58.345 50.000 0.00 0.00 45.72 3.74
38 39 2.488204 AAGCTTTCTCCTCTCCAAGC 57.512 50.000 0.00 0.00 41.72 4.01
39 40 4.934602 CACTTAAGCTTTCTCCTCTCCAAG 59.065 45.833 3.20 0.09 0.00 3.61
40 41 4.348168 ACACTTAAGCTTTCTCCTCTCCAA 59.652 41.667 3.20 0.00 0.00 3.53
41 42 3.904339 ACACTTAAGCTTTCTCCTCTCCA 59.096 43.478 3.20 0.00 0.00 3.86
42 43 4.249661 CACACTTAAGCTTTCTCCTCTCC 58.750 47.826 3.20 0.00 0.00 3.71
43 44 4.249661 CCACACTTAAGCTTTCTCCTCTC 58.750 47.826 3.20 0.00 0.00 3.20
44 45 3.558109 GCCACACTTAAGCTTTCTCCTCT 60.558 47.826 3.20 0.00 0.00 3.69
45 46 2.744741 GCCACACTTAAGCTTTCTCCTC 59.255 50.000 3.20 0.00 0.00 3.71
46 47 2.373502 AGCCACACTTAAGCTTTCTCCT 59.626 45.455 3.20 0.00 31.27 3.69
47 48 2.744741 GAGCCACACTTAAGCTTTCTCC 59.255 50.000 3.20 0.00 36.87 3.71
48 49 2.413453 CGAGCCACACTTAAGCTTTCTC 59.587 50.000 3.20 2.80 36.87 2.87
49 50 2.037251 TCGAGCCACACTTAAGCTTTCT 59.963 45.455 3.20 0.00 36.87 2.52
50 51 2.413453 CTCGAGCCACACTTAAGCTTTC 59.587 50.000 3.20 0.00 36.87 2.62
51 52 2.417719 CTCGAGCCACACTTAAGCTTT 58.582 47.619 3.20 0.00 36.87 3.51
52 53 1.941668 GCTCGAGCCACACTTAAGCTT 60.942 52.381 27.22 3.48 36.87 3.74
53 54 0.390472 GCTCGAGCCACACTTAAGCT 60.390 55.000 27.22 0.00 40.24 3.74
54 55 0.670546 TGCTCGAGCCACACTTAAGC 60.671 55.000 33.23 6.43 41.18 3.09
55 56 2.015736 ATGCTCGAGCCACACTTAAG 57.984 50.000 33.23 0.00 41.18 1.85
56 57 2.472695 AATGCTCGAGCCACACTTAA 57.527 45.000 33.23 13.58 41.18 1.85
57 58 2.289382 TGAAATGCTCGAGCCACACTTA 60.289 45.455 33.23 14.37 41.18 2.24
58 59 1.160137 GAAATGCTCGAGCCACACTT 58.840 50.000 33.23 18.49 41.18 3.16
59 60 0.035317 TGAAATGCTCGAGCCACACT 59.965 50.000 33.23 14.03 41.18 3.55
60 61 1.063174 GATGAAATGCTCGAGCCACAC 59.937 52.381 33.23 21.46 41.18 3.82
61 62 1.372582 GATGAAATGCTCGAGCCACA 58.627 50.000 33.23 25.06 41.18 4.17
62 63 0.302890 CGATGAAATGCTCGAGCCAC 59.697 55.000 33.23 20.80 41.18 5.01
63 64 0.175531 TCGATGAAATGCTCGAGCCA 59.824 50.000 33.23 23.65 38.86 4.75
64 65 1.004504 GTTCGATGAAATGCTCGAGCC 60.005 52.381 33.23 18.73 43.94 4.70
65 66 1.660607 TGTTCGATGAAATGCTCGAGC 59.339 47.619 30.42 30.42 43.94 5.03
66 67 2.029728 GGTGTTCGATGAAATGCTCGAG 59.970 50.000 8.45 8.45 43.94 4.04
67 68 1.999735 GGTGTTCGATGAAATGCTCGA 59.000 47.619 0.00 0.00 41.76 4.04
68 69 2.002586 AGGTGTTCGATGAAATGCTCG 58.997 47.619 0.00 0.00 36.25 5.03
69 70 3.002791 TGAGGTGTTCGATGAAATGCTC 58.997 45.455 0.00 0.00 0.00 4.26
70 71 3.057969 TGAGGTGTTCGATGAAATGCT 57.942 42.857 0.00 0.00 0.00 3.79
71 72 3.127548 ACATGAGGTGTTCGATGAAATGC 59.872 43.478 0.00 0.00 38.01 3.56
72 73 4.655027 CACATGAGGTGTTCGATGAAATG 58.345 43.478 0.00 0.00 42.75 2.32
73 74 4.952262 CACATGAGGTGTTCGATGAAAT 57.048 40.909 0.00 0.00 42.75 2.17
87 88 2.806019 GCTCACCTCCTATGCACATGAG 60.806 54.545 0.00 0.00 36.11 2.90
88 89 1.139654 GCTCACCTCCTATGCACATGA 59.860 52.381 0.00 0.00 0.00 3.07
89 90 1.140452 AGCTCACCTCCTATGCACATG 59.860 52.381 0.00 0.00 0.00 3.21
90 91 1.504912 AGCTCACCTCCTATGCACAT 58.495 50.000 0.00 0.00 0.00 3.21
91 92 2.034878 CTAGCTCACCTCCTATGCACA 58.965 52.381 0.00 0.00 0.00 4.57
92 93 2.295909 CTCTAGCTCACCTCCTATGCAC 59.704 54.545 0.00 0.00 0.00 4.57
93 94 2.591923 CTCTAGCTCACCTCCTATGCA 58.408 52.381 0.00 0.00 0.00 3.96
94 95 1.272212 GCTCTAGCTCACCTCCTATGC 59.728 57.143 0.00 0.00 38.21 3.14
95 96 2.591923 TGCTCTAGCTCACCTCCTATG 58.408 52.381 3.26 0.00 42.66 2.23
96 97 2.962421 GTTGCTCTAGCTCACCTCCTAT 59.038 50.000 3.26 0.00 42.66 2.57
97 98 2.291605 TGTTGCTCTAGCTCACCTCCTA 60.292 50.000 3.26 0.00 42.66 2.94
98 99 1.190643 GTTGCTCTAGCTCACCTCCT 58.809 55.000 3.26 0.00 42.66 3.69
99 100 0.898320 TGTTGCTCTAGCTCACCTCC 59.102 55.000 3.26 0.00 42.66 4.30
100 101 1.273606 TGTGTTGCTCTAGCTCACCTC 59.726 52.381 19.62 8.26 41.66 3.85
101 102 1.001406 GTGTGTTGCTCTAGCTCACCT 59.999 52.381 19.62 0.00 41.66 4.00
102 103 1.001406 AGTGTGTTGCTCTAGCTCACC 59.999 52.381 19.62 14.07 41.66 4.02
103 104 2.447244 AGTGTGTTGCTCTAGCTCAC 57.553 50.000 17.34 17.34 42.18 3.51
104 105 2.630098 AGAAGTGTGTTGCTCTAGCTCA 59.370 45.455 3.26 0.43 42.66 4.26
105 106 3.249917 GAGAAGTGTGTTGCTCTAGCTC 58.750 50.000 3.26 0.00 42.66 4.09
106 107 2.028567 GGAGAAGTGTGTTGCTCTAGCT 60.029 50.000 3.26 0.00 42.66 3.32
107 108 2.342179 GGAGAAGTGTGTTGCTCTAGC 58.658 52.381 0.00 0.00 42.50 3.42
108 109 2.300152 TGGGAGAAGTGTGTTGCTCTAG 59.700 50.000 0.00 0.00 0.00 2.43
109 110 2.037251 GTGGGAGAAGTGTGTTGCTCTA 59.963 50.000 0.00 0.00 0.00 2.43
110 111 1.131638 TGGGAGAAGTGTGTTGCTCT 58.868 50.000 0.00 0.00 0.00 4.09
111 112 1.230324 GTGGGAGAAGTGTGTTGCTC 58.770 55.000 0.00 0.00 0.00 4.26
112 113 0.532862 CGTGGGAGAAGTGTGTTGCT 60.533 55.000 0.00 0.00 0.00 3.91
113 114 1.507141 CCGTGGGAGAAGTGTGTTGC 61.507 60.000 0.00 0.00 0.00 4.17
114 115 1.507141 GCCGTGGGAGAAGTGTGTTG 61.507 60.000 0.00 0.00 0.00 3.33
115 116 1.227853 GCCGTGGGAGAAGTGTGTT 60.228 57.895 0.00 0.00 0.00 3.32
116 117 2.426023 GCCGTGGGAGAAGTGTGT 59.574 61.111 0.00 0.00 0.00 3.72
117 118 2.358737 GGCCGTGGGAGAAGTGTG 60.359 66.667 0.00 0.00 0.00 3.82
118 119 4.003788 CGGCCGTGGGAGAAGTGT 62.004 66.667 19.50 0.00 0.00 3.55
119 120 4.760047 CCGGCCGTGGGAGAAGTG 62.760 72.222 26.12 0.00 0.00 3.16
141 142 2.154462 CGGATCCACTGCTCTGTTTTT 58.846 47.619 13.41 0.00 0.00 1.94
142 143 1.611673 CCGGATCCACTGCTCTGTTTT 60.612 52.381 13.41 0.00 0.00 2.43
143 144 0.036010 CCGGATCCACTGCTCTGTTT 60.036 55.000 13.41 0.00 0.00 2.83
144 145 0.904865 TCCGGATCCACTGCTCTGTT 60.905 55.000 13.41 0.00 0.00 3.16
145 146 0.689080 ATCCGGATCCACTGCTCTGT 60.689 55.000 12.38 0.00 0.00 3.41
146 147 0.033228 GATCCGGATCCACTGCTCTG 59.967 60.000 30.80 0.00 31.76 3.35
147 148 0.105760 AGATCCGGATCCACTGCTCT 60.106 55.000 35.53 16.67 38.58 4.09
148 149 0.033228 CAGATCCGGATCCACTGCTC 59.967 60.000 35.53 14.59 38.58 4.26
149 150 0.689080 ACAGATCCGGATCCACTGCT 60.689 55.000 35.53 17.24 38.58 4.24
150 151 0.179000 AACAGATCCGGATCCACTGC 59.821 55.000 35.53 15.00 38.58 4.40
151 152 1.536922 CGAACAGATCCGGATCCACTG 60.537 57.143 35.53 29.06 38.58 3.66
152 153 0.747255 CGAACAGATCCGGATCCACT 59.253 55.000 35.53 22.16 38.58 4.00
153 154 0.876342 GCGAACAGATCCGGATCCAC 60.876 60.000 35.53 23.37 38.58 4.02
154 155 1.441729 GCGAACAGATCCGGATCCA 59.558 57.895 35.53 1.08 38.58 3.41
155 156 1.661821 CGCGAACAGATCCGGATCC 60.662 63.158 35.53 21.52 38.58 3.36
156 157 1.661821 CCGCGAACAGATCCGGATC 60.662 63.158 33.14 33.14 41.58 3.36
157 158 2.417516 CCGCGAACAGATCCGGAT 59.582 61.111 19.21 19.21 41.58 4.18
158 159 3.833645 CCCGCGAACAGATCCGGA 61.834 66.667 6.61 6.61 41.58 5.14
160 161 4.812476 TGCCCGCGAACAGATCCG 62.812 66.667 8.23 0.00 0.00 4.18
161 162 2.892425 CTGCCCGCGAACAGATCC 60.892 66.667 19.68 0.00 35.90 3.36
162 163 2.125512 ACTGCCCGCGAACAGATC 60.126 61.111 27.73 3.02 37.35 2.75
163 164 2.434884 CACTGCCCGCGAACAGAT 60.435 61.111 27.73 13.69 37.35 2.90
164 165 4.680237 CCACTGCCCGCGAACAGA 62.680 66.667 27.73 0.00 37.35 3.41
184 185 2.187163 GCTAGAACCGGGACAGCC 59.813 66.667 6.32 0.00 0.00 4.85
185 186 2.187163 GGCTAGAACCGGGACAGC 59.813 66.667 6.32 8.78 0.00 4.40
186 187 1.218316 GTGGCTAGAACCGGGACAG 59.782 63.158 6.32 0.00 0.00 3.51
187 188 2.288025 GGTGGCTAGAACCGGGACA 61.288 63.158 6.32 0.00 0.00 4.02
188 189 1.833787 TTGGTGGCTAGAACCGGGAC 61.834 60.000 6.32 0.00 40.86 4.46
189 190 1.536907 TTGGTGGCTAGAACCGGGA 60.537 57.895 6.32 0.00 40.86 5.14
190 191 1.376812 GTTGGTGGCTAGAACCGGG 60.377 63.158 6.32 0.00 40.86 5.73
191 192 1.376812 GGTTGGTGGCTAGAACCGG 60.377 63.158 0.00 0.00 40.86 5.28
192 193 4.296265 GGTTGGTGGCTAGAACCG 57.704 61.111 9.70 0.00 40.86 4.44
193 194 1.376812 CCGGTTGGTGGCTAGAACC 60.377 63.158 7.86 7.86 38.26 3.62
194 195 1.376812 CCCGGTTGGTGGCTAGAAC 60.377 63.158 0.00 0.00 0.00 3.01
195 196 1.536907 TCCCGGTTGGTGGCTAGAA 60.537 57.895 0.00 0.00 34.77 2.10
196 197 2.120940 TCCCGGTTGGTGGCTAGA 59.879 61.111 0.00 0.00 34.77 2.43
197 198 2.267961 GTCCCGGTTGGTGGCTAG 59.732 66.667 0.00 0.00 34.77 3.42
198 199 2.203877 AGTCCCGGTTGGTGGCTA 60.204 61.111 0.00 0.00 34.77 3.93
199 200 3.953775 CAGTCCCGGTTGGTGGCT 61.954 66.667 0.00 0.00 34.77 4.75
200 201 3.485346 TTCAGTCCCGGTTGGTGGC 62.485 63.158 0.00 0.00 34.77 5.01
201 202 1.302511 CTTCAGTCCCGGTTGGTGG 60.303 63.158 0.00 0.00 34.77 4.61
202 203 1.302511 CCTTCAGTCCCGGTTGGTG 60.303 63.158 0.00 0.00 34.77 4.17
203 204 1.768888 ACCTTCAGTCCCGGTTGGT 60.769 57.895 0.00 0.00 34.77 3.67
204 205 1.302511 CACCTTCAGTCCCGGTTGG 60.303 63.158 0.00 0.00 0.00 3.77
205 206 1.966451 GCACCTTCAGTCCCGGTTG 60.966 63.158 0.00 0.00 0.00 3.77
206 207 2.147387 AGCACCTTCAGTCCCGGTT 61.147 57.895 0.00 0.00 0.00 4.44
207 208 2.526873 AGCACCTTCAGTCCCGGT 60.527 61.111 0.00 0.00 0.00 5.28
208 209 2.046892 CAGCACCTTCAGTCCCGG 60.047 66.667 0.00 0.00 0.00 5.73
209 210 2.046892 CCAGCACCTTCAGTCCCG 60.047 66.667 0.00 0.00 0.00 5.14
210 211 2.352805 CCCAGCACCTTCAGTCCC 59.647 66.667 0.00 0.00 0.00 4.46
211 212 2.360475 GCCCAGCACCTTCAGTCC 60.360 66.667 0.00 0.00 0.00 3.85
212 213 2.360475 GGCCCAGCACCTTCAGTC 60.360 66.667 0.00 0.00 0.00 3.51
213 214 3.177884 TGGCCCAGCACCTTCAGT 61.178 61.111 0.00 0.00 0.00 3.41
214 215 2.360852 CTGGCCCAGCACCTTCAG 60.361 66.667 0.00 0.00 0.00 3.02
215 216 3.970410 CCTGGCCCAGCACCTTCA 61.970 66.667 4.81 0.00 0.00 3.02
216 217 3.635268 CTCCTGGCCCAGCACCTTC 62.635 68.421 4.81 0.00 0.00 3.46
217 218 3.655211 CTCCTGGCCCAGCACCTT 61.655 66.667 4.81 0.00 0.00 3.50
228 229 3.801997 AATGGGCCTCGCTCCTGG 61.802 66.667 4.53 0.00 0.00 4.45
229 230 2.515523 CAATGGGCCTCGCTCCTG 60.516 66.667 4.53 0.00 0.00 3.86
230 231 3.801997 CCAATGGGCCTCGCTCCT 61.802 66.667 4.53 0.00 0.00 3.69
231 232 4.115199 ACCAATGGGCCTCGCTCC 62.115 66.667 4.53 0.00 37.90 4.70
232 233 2.514824 GACCAATGGGCCTCGCTC 60.515 66.667 4.53 0.00 37.90 5.03
239 240 2.754254 GAACCGGGACCAATGGGC 60.754 66.667 6.32 0.00 37.90 5.36
240 241 2.437716 CGAACCGGGACCAATGGG 60.438 66.667 6.32 0.00 41.29 4.00
241 242 2.038269 CACGAACCGGGACCAATGG 61.038 63.158 6.32 0.00 28.17 3.16
242 243 1.296056 GACACGAACCGGGACCAATG 61.296 60.000 6.32 0.00 32.98 2.82
243 244 1.004200 GACACGAACCGGGACCAAT 60.004 57.895 6.32 0.00 32.98 3.16
244 245 2.135581 AGACACGAACCGGGACCAA 61.136 57.895 6.32 0.00 32.98 3.67
245 246 2.522436 AGACACGAACCGGGACCA 60.522 61.111 6.32 0.00 32.98 4.02
246 247 2.048503 CAGACACGAACCGGGACC 60.049 66.667 6.32 0.00 32.98 4.46
247 248 0.249573 TTTCAGACACGAACCGGGAC 60.250 55.000 6.32 0.00 32.98 4.46
248 249 0.249573 GTTTCAGACACGAACCGGGA 60.250 55.000 6.32 0.00 32.98 5.14
249 250 1.226030 GGTTTCAGACACGAACCGGG 61.226 60.000 6.32 0.00 34.13 5.73
250 251 2.231820 GGTTTCAGACACGAACCGG 58.768 57.895 0.00 0.00 34.13 5.28
252 253 1.226030 CCCGGTTTCAGACACGAACC 61.226 60.000 0.00 0.00 39.50 3.62
253 254 0.249573 TCCCGGTTTCAGACACGAAC 60.250 55.000 0.00 0.00 0.00 3.95
254 255 0.249573 GTCCCGGTTTCAGACACGAA 60.250 55.000 0.00 0.00 0.00 3.85
255 256 1.364901 GTCCCGGTTTCAGACACGA 59.635 57.895 0.00 0.00 0.00 4.35
256 257 1.666872 GGTCCCGGTTTCAGACACG 60.667 63.158 0.00 0.00 31.99 4.49
257 258 0.179040 TTGGTCCCGGTTTCAGACAC 60.179 55.000 0.00 0.00 31.99 3.67
258 259 0.547075 TTTGGTCCCGGTTTCAGACA 59.453 50.000 0.00 0.00 31.99 3.41
259 260 1.607148 CTTTTGGTCCCGGTTTCAGAC 59.393 52.381 0.00 0.00 0.00 3.51
260 261 1.213430 ACTTTTGGTCCCGGTTTCAGA 59.787 47.619 0.00 0.00 0.00 3.27
261 262 1.336755 CACTTTTGGTCCCGGTTTCAG 59.663 52.381 0.00 0.00 0.00 3.02
262 263 1.341187 ACACTTTTGGTCCCGGTTTCA 60.341 47.619 0.00 0.00 0.00 2.69
263 264 1.335810 GACACTTTTGGTCCCGGTTTC 59.664 52.381 0.00 0.00 0.00 2.78
264 265 1.341187 TGACACTTTTGGTCCCGGTTT 60.341 47.619 0.00 0.00 34.36 3.27
265 266 0.256464 TGACACTTTTGGTCCCGGTT 59.744 50.000 0.00 0.00 34.36 4.44
266 267 0.179029 CTGACACTTTTGGTCCCGGT 60.179 55.000 0.00 0.00 34.36 5.28
267 268 0.107831 TCTGACACTTTTGGTCCCGG 59.892 55.000 0.00 0.00 34.36 5.73
268 269 1.226746 GTCTGACACTTTTGGTCCCG 58.773 55.000 2.24 0.00 34.36 5.14
269 270 2.341846 TGTCTGACACTTTTGGTCCC 57.658 50.000 6.36 0.00 34.36 4.46
270 271 4.554723 CGATTTGTCTGACACTTTTGGTCC 60.555 45.833 10.56 0.00 34.36 4.46
271 272 4.527564 CGATTTGTCTGACACTTTTGGTC 58.472 43.478 10.56 0.99 35.83 4.02
272 273 3.315191 CCGATTTGTCTGACACTTTTGGT 59.685 43.478 10.56 0.00 0.00 3.67
273 274 3.304659 CCCGATTTGTCTGACACTTTTGG 60.305 47.826 10.56 10.76 0.00 3.28
274 275 3.563808 TCCCGATTTGTCTGACACTTTTG 59.436 43.478 10.56 2.46 0.00 2.44
275 276 3.564225 GTCCCGATTTGTCTGACACTTTT 59.436 43.478 10.56 0.00 0.00 2.27
276 277 3.139077 GTCCCGATTTGTCTGACACTTT 58.861 45.455 10.56 0.00 0.00 2.66
277 278 2.550208 GGTCCCGATTTGTCTGACACTT 60.550 50.000 10.56 0.33 0.00 3.16
278 279 1.002087 GGTCCCGATTTGTCTGACACT 59.998 52.381 10.56 0.52 0.00 3.55
279 280 1.270625 TGGTCCCGATTTGTCTGACAC 60.271 52.381 10.56 0.00 0.00 3.67
280 281 1.052617 TGGTCCCGATTTGTCTGACA 58.947 50.000 6.36 6.36 0.00 3.58
281 282 2.178912 TTGGTCCCGATTTGTCTGAC 57.821 50.000 0.00 0.00 0.00 3.51
282 283 2.617788 CCATTGGTCCCGATTTGTCTGA 60.618 50.000 0.00 0.00 0.00 3.27
283 284 1.745087 CCATTGGTCCCGATTTGTCTG 59.255 52.381 0.00 0.00 0.00 3.51
284 285 1.955208 GCCATTGGTCCCGATTTGTCT 60.955 52.381 4.26 0.00 0.00 3.41
285 286 0.455815 GCCATTGGTCCCGATTTGTC 59.544 55.000 4.26 0.00 0.00 3.18
286 287 0.970427 GGCCATTGGTCCCGATTTGT 60.970 55.000 4.26 0.00 0.00 2.83
287 288 1.675720 GGGCCATTGGTCCCGATTTG 61.676 60.000 15.98 0.00 42.67 2.32
288 289 1.381191 GGGCCATTGGTCCCGATTT 60.381 57.895 15.98 0.00 42.67 2.17
289 290 2.278738 GGGCCATTGGTCCCGATT 59.721 61.111 15.98 0.00 42.67 3.34
295 296 3.712287 CCTTTGGGGCCATTGGTC 58.288 61.111 4.39 0.54 0.00 4.02
322 323 3.499737 GTTCGTGATGCCAGGGCG 61.500 66.667 5.74 0.00 45.51 6.13
323 324 3.134127 GGTTCGTGATGCCAGGGC 61.134 66.667 2.62 2.62 42.35 5.19
324 325 2.819595 CGGTTCGTGATGCCAGGG 60.820 66.667 0.00 0.00 0.00 4.45
325 326 2.819595 CCGGTTCGTGATGCCAGG 60.820 66.667 0.00 0.00 0.00 4.45
326 327 2.819595 CCCGGTTCGTGATGCCAG 60.820 66.667 0.00 0.00 0.00 4.85
327 328 3.315140 TCCCGGTTCGTGATGCCA 61.315 61.111 0.00 0.00 0.00 4.92
328 329 1.952102 TAGTCCCGGTTCGTGATGCC 61.952 60.000 0.00 0.00 0.00 4.40
329 330 0.108520 TTAGTCCCGGTTCGTGATGC 60.109 55.000 0.00 0.00 0.00 3.91
330 331 2.201732 CATTAGTCCCGGTTCGTGATG 58.798 52.381 0.00 0.00 0.00 3.07
331 332 1.472728 GCATTAGTCCCGGTTCGTGAT 60.473 52.381 0.00 0.00 0.00 3.06
332 333 0.108520 GCATTAGTCCCGGTTCGTGA 60.109 55.000 0.00 0.00 0.00 4.35
333 334 1.087771 GGCATTAGTCCCGGTTCGTG 61.088 60.000 0.00 0.00 0.00 4.35
334 335 1.219935 GGCATTAGTCCCGGTTCGT 59.780 57.895 0.00 0.00 0.00 3.85
335 336 1.523032 GGGCATTAGTCCCGGTTCG 60.523 63.158 0.00 0.00 33.43 3.95
336 337 4.553668 GGGCATTAGTCCCGGTTC 57.446 61.111 0.00 0.00 33.43 3.62
342 343 0.335019 ACCAAAGGGGGCATTAGTCC 59.665 55.000 0.00 0.00 42.91 3.85
351 352 3.578968 GAACCGGGACCAAAGGGGG 62.579 68.421 6.32 0.00 42.91 5.40
352 353 2.035155 GAACCGGGACCAAAGGGG 59.965 66.667 6.32 0.00 44.81 4.79
353 354 0.965363 CATGAACCGGGACCAAAGGG 60.965 60.000 6.32 0.00 41.29 3.95
354 355 0.037590 TCATGAACCGGGACCAAAGG 59.962 55.000 6.32 0.00 0.00 3.11
355 356 1.271379 ACTCATGAACCGGGACCAAAG 60.271 52.381 6.32 5.46 0.00 2.77
356 357 0.768622 ACTCATGAACCGGGACCAAA 59.231 50.000 6.32 0.00 0.00 3.28
357 358 0.036164 CACTCATGAACCGGGACCAA 59.964 55.000 6.32 0.00 0.00 3.67
358 359 0.834261 TCACTCATGAACCGGGACCA 60.834 55.000 6.32 0.00 0.00 4.02
359 360 0.323629 TTCACTCATGAACCGGGACC 59.676 55.000 6.32 0.00 40.01 4.46
360 361 3.927555 TTCACTCATGAACCGGGAC 57.072 52.632 6.32 0.00 40.01 4.46
367 368 4.335315 GCATTAATCCGGTTCACTCATGAA 59.665 41.667 0.00 0.00 42.73 2.57
368 369 3.876914 GCATTAATCCGGTTCACTCATGA 59.123 43.478 0.00 0.00 0.00 3.07
369 370 3.003689 GGCATTAATCCGGTTCACTCATG 59.996 47.826 0.00 0.00 0.00 3.07
370 371 3.214328 GGCATTAATCCGGTTCACTCAT 58.786 45.455 0.00 0.00 0.00 2.90
371 372 2.639065 GGCATTAATCCGGTTCACTCA 58.361 47.619 0.00 0.00 0.00 3.41
372 373 1.947456 GGGCATTAATCCGGTTCACTC 59.053 52.381 0.00 0.00 0.00 3.51
373 374 1.564348 AGGGCATTAATCCGGTTCACT 59.436 47.619 0.00 0.00 0.00 3.41
374 375 2.052782 AGGGCATTAATCCGGTTCAC 57.947 50.000 0.00 0.00 0.00 3.18
375 376 2.818751 AAGGGCATTAATCCGGTTCA 57.181 45.000 0.00 0.00 0.00 3.18
376 377 3.314357 GTGTAAGGGCATTAATCCGGTTC 59.686 47.826 0.00 0.00 0.00 3.62
377 378 3.284617 GTGTAAGGGCATTAATCCGGTT 58.715 45.455 0.00 0.00 0.00 4.44
378 379 2.240160 TGTGTAAGGGCATTAATCCGGT 59.760 45.455 0.00 0.00 0.00 5.28
379 380 2.878406 CTGTGTAAGGGCATTAATCCGG 59.122 50.000 0.00 0.00 0.00 5.14
380 381 2.878406 CCTGTGTAAGGGCATTAATCCG 59.122 50.000 0.00 0.00 43.15 4.18
392 393 2.270352 TTGGTTGAGGCCTGTGTAAG 57.730 50.000 12.00 0.00 0.00 2.34
393 394 2.582052 CTTTGGTTGAGGCCTGTGTAA 58.418 47.619 12.00 0.00 0.00 2.41
394 395 1.817740 GCTTTGGTTGAGGCCTGTGTA 60.818 52.381 12.00 0.00 0.00 2.90
395 396 1.109323 GCTTTGGTTGAGGCCTGTGT 61.109 55.000 12.00 0.00 0.00 3.72
396 397 1.662044 GCTTTGGTTGAGGCCTGTG 59.338 57.895 12.00 0.00 0.00 3.66
397 398 1.531602 GGCTTTGGTTGAGGCCTGT 60.532 57.895 12.00 0.00 41.20 4.00
398 399 3.369921 GGCTTTGGTTGAGGCCTG 58.630 61.111 12.00 0.00 41.20 4.85
401 402 1.115326 AACAGGGCTTTGGTTGAGGC 61.115 55.000 0.00 0.00 38.83 4.70
402 403 1.413118 AAACAGGGCTTTGGTTGAGG 58.587 50.000 0.00 0.00 0.00 3.86
403 404 2.695147 AGAAAACAGGGCTTTGGTTGAG 59.305 45.455 0.00 0.00 0.00 3.02
404 405 2.745968 AGAAAACAGGGCTTTGGTTGA 58.254 42.857 0.00 0.00 0.00 3.18
405 406 3.636764 AGTAGAAAACAGGGCTTTGGTTG 59.363 43.478 0.00 0.00 0.00 3.77
406 407 3.910989 AGTAGAAAACAGGGCTTTGGTT 58.089 40.909 0.00 0.00 0.00 3.67
407 408 3.595190 AGTAGAAAACAGGGCTTTGGT 57.405 42.857 0.00 0.00 0.00 3.67
408 409 4.455877 CACTAGTAGAAAACAGGGCTTTGG 59.544 45.833 3.59 0.00 0.00 3.28
409 410 5.063880 ACACTAGTAGAAAACAGGGCTTTG 58.936 41.667 3.59 0.00 0.00 2.77
410 411 5.306114 ACACTAGTAGAAAACAGGGCTTT 57.694 39.130 3.59 0.00 0.00 3.51
411 412 4.262938 GGACACTAGTAGAAAACAGGGCTT 60.263 45.833 3.59 0.00 0.00 4.35
412 413 3.261137 GGACACTAGTAGAAAACAGGGCT 59.739 47.826 3.59 0.00 0.00 5.19
413 414 3.261137 AGGACACTAGTAGAAAACAGGGC 59.739 47.826 3.59 0.00 0.00 5.19
414 415 5.950549 TCTAGGACACTAGTAGAAAACAGGG 59.049 44.000 3.59 0.00 45.60 4.45
415 416 7.393796 TCTTCTAGGACACTAGTAGAAAACAGG 59.606 40.741 3.59 0.00 45.19 4.00
416 417 8.338072 TCTTCTAGGACACTAGTAGAAAACAG 57.662 38.462 3.59 0.00 45.19 3.16
417 418 8.162085 TCTCTTCTAGGACACTAGTAGAAAACA 58.838 37.037 3.59 0.00 46.45 2.83
418 419 8.564509 TCTCTTCTAGGACACTAGTAGAAAAC 57.435 38.462 3.59 0.00 46.45 2.43
419 420 9.584008 TTTCTCTTCTAGGACACTAGTAGAAAA 57.416 33.333 3.59 13.86 46.45 2.29
420 421 9.584008 TTTTCTCTTCTAGGACACTAGTAGAAA 57.416 33.333 3.59 16.33 46.45 2.52
421 422 9.584008 TTTTTCTCTTCTAGGACACTAGTAGAA 57.416 33.333 3.59 0.00 46.45 2.10
445 446 4.145807 TGACCACCCGTGAATGTATTTTT 58.854 39.130 0.00 0.00 0.00 1.94
446 447 3.756434 CTGACCACCCGTGAATGTATTTT 59.244 43.478 0.00 0.00 0.00 1.82
447 448 3.343617 CTGACCACCCGTGAATGTATTT 58.656 45.455 0.00 0.00 0.00 1.40
448 449 2.355716 CCTGACCACCCGTGAATGTATT 60.356 50.000 0.00 0.00 0.00 1.89
449 450 1.209504 CCTGACCACCCGTGAATGTAT 59.790 52.381 0.00 0.00 0.00 2.29
450 451 0.611200 CCTGACCACCCGTGAATGTA 59.389 55.000 0.00 0.00 0.00 2.29
451 452 1.374947 CCTGACCACCCGTGAATGT 59.625 57.895 0.00 0.00 0.00 2.71
452 453 0.611200 TACCTGACCACCCGTGAATG 59.389 55.000 0.00 0.00 0.00 2.67
453 454 1.209504 CATACCTGACCACCCGTGAAT 59.790 52.381 0.00 0.00 0.00 2.57
454 455 0.611200 CATACCTGACCACCCGTGAA 59.389 55.000 0.00 0.00 0.00 3.18
455 456 0.543410 ACATACCTGACCACCCGTGA 60.543 55.000 0.00 0.00 0.00 4.35
456 457 0.108329 GACATACCTGACCACCCGTG 60.108 60.000 0.00 0.00 0.00 4.94
457 458 0.543410 TGACATACCTGACCACCCGT 60.543 55.000 0.00 0.00 0.00 5.28
458 459 0.830648 ATGACATACCTGACCACCCG 59.169 55.000 0.00 0.00 0.00 5.28
459 460 1.747206 GCATGACATACCTGACCACCC 60.747 57.143 0.00 0.00 0.00 4.61
460 461 1.065491 TGCATGACATACCTGACCACC 60.065 52.381 0.00 0.00 0.00 4.61
461 462 2.401583 TGCATGACATACCTGACCAC 57.598 50.000 0.00 0.00 0.00 4.16
462 463 3.054508 TGAATGCATGACATACCTGACCA 60.055 43.478 0.00 0.00 38.34 4.02
463 464 3.544684 TGAATGCATGACATACCTGACC 58.455 45.455 0.00 0.00 38.34 4.02
464 465 4.201950 GGTTGAATGCATGACATACCTGAC 60.202 45.833 0.00 0.00 38.34 3.51
465 466 3.947196 GGTTGAATGCATGACATACCTGA 59.053 43.478 0.00 0.00 38.34 3.86
466 467 3.242837 CGGTTGAATGCATGACATACCTG 60.243 47.826 21.05 15.80 38.34 4.00
467 468 2.945008 CGGTTGAATGCATGACATACCT 59.055 45.455 21.05 1.69 38.34 3.08
468 469 2.942376 TCGGTTGAATGCATGACATACC 59.058 45.455 0.00 12.39 38.34 2.73
469 470 4.614555 TTCGGTTGAATGCATGACATAC 57.385 40.909 0.00 5.65 38.34 2.39
470 471 5.833406 AATTCGGTTGAATGCATGACATA 57.167 34.783 0.00 0.00 44.02 2.29
471 472 4.724074 AATTCGGTTGAATGCATGACAT 57.276 36.364 0.00 0.00 44.02 3.06
472 473 5.398169 GTTAATTCGGTTGAATGCATGACA 58.602 37.500 0.00 0.74 44.02 3.58
520 523 5.776744 AGGAAAACAAATGCAGTTCTCATC 58.223 37.500 0.00 0.00 0.00 2.92
530 533 4.335400 TCAAGGGAAGGAAAACAAATGC 57.665 40.909 0.00 0.00 0.00 3.56
544 551 1.556911 GAGCCTGTGAAGATCAAGGGA 59.443 52.381 0.00 0.00 30.50 4.20
566 573 0.866427 CTGTGTCACTGCTCTTGCTG 59.134 55.000 4.27 0.00 42.70 4.41
567 574 0.755079 TCTGTGTCACTGCTCTTGCT 59.245 50.000 4.27 0.00 40.48 3.91
568 575 0.864455 GTCTGTGTCACTGCTCTTGC 59.136 55.000 4.27 0.00 40.20 4.01
569 576 1.863454 GTGTCTGTGTCACTGCTCTTG 59.137 52.381 4.27 0.00 33.59 3.02
570 577 1.482182 TGTGTCTGTGTCACTGCTCTT 59.518 47.619 4.27 0.00 36.83 2.85
571 578 1.114627 TGTGTCTGTGTCACTGCTCT 58.885 50.000 4.27 0.00 36.83 4.09
572 579 2.160822 ATGTGTCTGTGTCACTGCTC 57.839 50.000 4.27 1.97 36.83 4.26
573 580 2.630098 AGTATGTGTCTGTGTCACTGCT 59.370 45.455 4.27 0.00 36.83 4.24
574 581 2.733552 CAGTATGTGTCTGTGTCACTGC 59.266 50.000 4.27 1.55 36.83 4.40
575 582 4.243007 TCAGTATGTGTCTGTGTCACTG 57.757 45.455 4.27 3.89 37.40 3.66
576 583 6.782082 ATATCAGTATGTGTCTGTGTCACT 57.218 37.500 4.27 0.00 37.40 3.41
577 584 6.918569 GGTATATCAGTATGTGTCTGTGTCAC 59.081 42.308 0.00 0.00 37.40 3.67
579 586 7.278461 AGGTATATCAGTATGTGTCTGTGTC 57.722 40.000 0.00 0.00 37.40 3.67
580 587 7.342026 TGAAGGTATATCAGTATGTGTCTGTGT 59.658 37.037 0.00 0.00 37.40 3.72
581 588 7.649705 GTGAAGGTATATCAGTATGTGTCTGTG 59.350 40.741 0.00 0.00 37.40 3.66
582 589 7.342026 TGTGAAGGTATATCAGTATGTGTCTGT 59.658 37.037 0.00 0.00 37.40 3.41
583 590 7.716612 TGTGAAGGTATATCAGTATGTGTCTG 58.283 38.462 0.00 0.00 37.40 3.51
584 591 7.470702 GCTGTGAAGGTATATCAGTATGTGTCT 60.471 40.741 0.00 0.00 37.40 3.41
585 592 6.642950 GCTGTGAAGGTATATCAGTATGTGTC 59.357 42.308 0.00 0.00 37.40 3.67
588 595 5.012148 GGGCTGTGAAGGTATATCAGTATGT 59.988 44.000 0.00 0.00 37.40 2.29
589 596 5.012046 TGGGCTGTGAAGGTATATCAGTATG 59.988 44.000 0.00 0.00 37.54 2.39
590 597 5.155161 TGGGCTGTGAAGGTATATCAGTAT 58.845 41.667 0.00 0.00 0.00 2.12
591 598 4.552674 TGGGCTGTGAAGGTATATCAGTA 58.447 43.478 0.00 0.00 0.00 2.74
592 599 3.384168 TGGGCTGTGAAGGTATATCAGT 58.616 45.455 0.00 0.00 0.00 3.41
593 600 3.389329 ACTGGGCTGTGAAGGTATATCAG 59.611 47.826 0.00 0.00 0.00 2.90
594 601 3.384168 ACTGGGCTGTGAAGGTATATCA 58.616 45.455 0.00 0.00 0.00 2.15
595 602 4.423625 AACTGGGCTGTGAAGGTATATC 57.576 45.455 0.00 0.00 0.00 1.63
596 603 5.397559 GGTTAACTGGGCTGTGAAGGTATAT 60.398 44.000 5.42 0.00 0.00 0.86
597 604 4.080751 GGTTAACTGGGCTGTGAAGGTATA 60.081 45.833 5.42 0.00 0.00 1.47
599 606 2.039348 GGTTAACTGGGCTGTGAAGGTA 59.961 50.000 5.42 0.00 0.00 3.08
600 607 1.202891 GGTTAACTGGGCTGTGAAGGT 60.203 52.381 5.42 0.00 0.00 3.50
601 608 1.534729 GGTTAACTGGGCTGTGAAGG 58.465 55.000 5.42 0.00 0.00 3.46
614 632 6.581171 ATGTAGTATACTAGGCCGGTTAAC 57.419 41.667 12.99 0.00 43.54 2.01
664 684 4.702020 CATGCATGCACACCATCG 57.298 55.556 25.37 1.67 29.71 3.84
709 741 4.811024 TCTAGCTCCAGAATTTATTGCGTG 59.189 41.667 0.00 0.00 0.00 5.34
756 788 0.376502 GGGAGACGAGTACTGTACGC 59.623 60.000 11.97 11.52 0.00 4.42
757 789 1.012841 GGGGAGACGAGTACTGTACG 58.987 60.000 11.97 0.00 0.00 3.67
758 790 2.119801 TGGGGAGACGAGTACTGTAC 57.880 55.000 9.93 9.93 0.00 2.90
773 805 2.374184 TGGACGCATAAATTCTTGGGG 58.626 47.619 8.76 0.00 0.00 4.96
786 818 2.798976 ACGTTACTACTTTGGACGCA 57.201 45.000 0.00 0.00 37.24 5.24
791 823 3.568538 AGCACGTACGTTACTACTTTGG 58.431 45.455 20.23 4.35 0.00 3.28
865 913 5.762045 TGATGCTTTTCCTTTTCTTCTTCG 58.238 37.500 0.00 0.00 0.00 3.79
876 924 4.792513 AGGATGAGATGATGCTTTTCCT 57.207 40.909 0.00 0.00 0.00 3.36
877 925 5.049818 CGTTAGGATGAGATGATGCTTTTCC 60.050 44.000 0.00 0.00 0.00 3.13
896 946 5.808540 TCGATCATTGTTTTACCTCCGTTAG 59.191 40.000 0.00 0.00 0.00 2.34
913 963 1.534729 TCCGACCATCGATCGATCAT 58.465 50.000 27.20 17.90 43.74 2.45
914 964 1.534729 ATCCGACCATCGATCGATCA 58.465 50.000 27.20 12.32 43.74 2.92
915 965 3.054276 GTATCCGACCATCGATCGATC 57.946 52.381 27.20 16.50 43.74 3.69
936 996 3.300853 CGTGTACGTGCTCAGATTTGTAG 59.699 47.826 4.97 0.00 34.11 2.74
937 997 3.239254 CGTGTACGTGCTCAGATTTGTA 58.761 45.455 4.97 0.00 34.11 2.41
952 1012 4.755191 TCGTGTCTATACGTACGTGTAC 57.245 45.455 30.25 19.21 44.06 2.90
953 1013 5.173854 CAGATCGTGTCTATACGTACGTGTA 59.826 44.000 30.25 25.44 44.06 2.90
954 1014 4.026228 CAGATCGTGTCTATACGTACGTGT 60.026 45.833 30.25 25.72 44.06 4.49
955 1015 4.026228 ACAGATCGTGTCTATACGTACGTG 60.026 45.833 30.25 14.29 44.06 4.49
994 1066 4.828296 GTAGCGGGGGAGACGGGA 62.828 72.222 0.00 0.00 0.00 5.14
1205 1298 0.692756 GGGAAGGGAGGGGAAGAGAG 60.693 65.000 0.00 0.00 0.00 3.20
1206 1299 1.396594 GGGAAGGGAGGGGAAGAGA 59.603 63.158 0.00 0.00 0.00 3.10
1207 1300 1.694525 GGGGAAGGGAGGGGAAGAG 60.695 68.421 0.00 0.00 0.00 2.85
1285 1378 3.394836 GGCCGAGGAAGCTCTGGT 61.395 66.667 0.00 0.00 0.00 4.00
1313 1406 2.158959 GTCGATTCACCACCGCGAG 61.159 63.158 8.23 0.00 0.00 5.03
1357 1450 2.098233 CGCCACGCACGGAGTAAAT 61.098 57.895 0.00 0.00 41.61 1.40
1389 1482 2.234143 TCCCGAGCTCAGATCTATGTG 58.766 52.381 15.40 0.00 0.00 3.21
1534 1627 3.432749 GCATGCCACTTCTGATCTCCTTA 60.433 47.826 6.36 0.00 0.00 2.69
1535 1628 2.683152 GCATGCCACTTCTGATCTCCTT 60.683 50.000 6.36 0.00 0.00 3.36
1536 1629 1.134159 GCATGCCACTTCTGATCTCCT 60.134 52.381 6.36 0.00 0.00 3.69
1742 1869 1.007502 GATGCTGTGCGGCAACAAA 60.008 52.632 3.23 0.00 45.68 2.83
1755 1882 1.825090 TGATGCAAAACCTCGATGCT 58.175 45.000 9.19 0.00 40.66 3.79
1894 2027 9.474313 TGAATTGATTAAGCTATTTTGTACCCT 57.526 29.630 2.06 0.00 0.00 4.34
1946 2082 7.659390 TCAACACTTGATGAACACATACATGTA 59.341 33.333 8.27 8.27 35.32 2.29
1947 2083 6.486320 TCAACACTTGATGAACACATACATGT 59.514 34.615 2.69 2.69 36.68 3.21
1948 2084 6.798476 GTCAACACTTGATGAACACATACATG 59.202 38.462 0.00 0.00 42.47 3.21
2008 2146 4.559153 AGGAACTTAAATGTTGCACATGC 58.441 39.130 0.00 0.00 34.58 4.06
2032 2170 4.412207 CTTTTGGTATTTAACTCCGCAGC 58.588 43.478 0.00 0.00 0.00 5.25
2033 2171 4.412207 GCTTTTGGTATTTAACTCCGCAG 58.588 43.478 0.00 0.00 0.00 5.18
2034 2172 3.191791 GGCTTTTGGTATTTAACTCCGCA 59.808 43.478 0.00 0.00 0.00 5.69
2150 2288 2.294233 GCACCAACCATATAGGCATGTG 59.706 50.000 0.00 0.00 43.14 3.21
2151 2289 2.586425 GCACCAACCATATAGGCATGT 58.414 47.619 0.00 0.00 43.14 3.21
2153 2291 1.782752 AGGCACCAACCATATAGGCAT 59.217 47.619 0.00 0.00 43.14 4.40
2154 2292 1.133823 CAGGCACCAACCATATAGGCA 60.134 52.381 0.00 0.00 43.14 4.75
2155 2293 1.609208 CAGGCACCAACCATATAGGC 58.391 55.000 0.00 0.00 43.14 3.93
2156 2294 1.133823 TGCAGGCACCAACCATATAGG 60.134 52.381 0.00 0.00 45.67 2.57
2157 2295 1.949525 GTGCAGGCACCAACCATATAG 59.050 52.381 13.28 0.00 40.79 1.31
2158 2296 2.051334 GTGCAGGCACCAACCATATA 57.949 50.000 13.28 0.00 40.79 0.86
2159 2297 2.886382 GTGCAGGCACCAACCATAT 58.114 52.632 13.28 0.00 40.79 1.78
2228 2366 5.139001 AGTAGTCTACTATACAGGCCCAAC 58.861 45.833 10.96 0.00 37.23 3.77
2391 2545 5.334260 CGAGAGTTCTGAAACGAGTTAGAGT 60.334 44.000 0.00 0.00 40.48 3.24
2406 2560 3.430218 CGAGTTTGAAATGCGAGAGTTCT 59.570 43.478 0.00 0.00 0.00 3.01
2653 2877 8.461222 TCTTGATATTGACCTGCAAATTTGTAG 58.539 33.333 24.52 24.52 40.48 2.74
2656 2880 7.254319 GCATCTTGATATTGACCTGCAAATTTG 60.254 37.037 14.03 14.03 40.48 2.32
2675 2899 6.047870 AGCTAGTCTACTTCATTGCATCTTG 58.952 40.000 0.00 0.00 0.00 3.02
2719 2948 6.458210 ACTTAATTGTGGGAAGCAATTGAAG 58.542 36.000 10.34 1.54 43.70 3.02
2721 2950 5.538053 TGACTTAATTGTGGGAAGCAATTGA 59.462 36.000 10.34 4.80 43.70 2.57
2742 2972 7.901377 GCATTGCAAAGTCAATAATTCAATGAC 59.099 33.333 1.71 10.23 40.90 3.06
2754 2984 4.114073 CAAGTTCTGCATTGCAAAGTCAA 58.886 39.130 13.18 0.00 38.41 3.18
2756 2986 3.968649 TCAAGTTCTGCATTGCAAAGTC 58.031 40.909 13.18 4.06 38.41 3.01
2758 2988 3.678072 CCATCAAGTTCTGCATTGCAAAG 59.322 43.478 13.18 0.00 38.41 2.77
2760 2990 2.892215 TCCATCAAGTTCTGCATTGCAA 59.108 40.909 13.18 0.00 38.41 4.08
2841 3113 0.110486 GTGGTGCTGGGGAAGAAGAA 59.890 55.000 0.00 0.00 0.00 2.52
2842 3114 1.761174 GTGGTGCTGGGGAAGAAGA 59.239 57.895 0.00 0.00 0.00 2.87
2843 3115 1.303643 GGTGGTGCTGGGGAAGAAG 60.304 63.158 0.00 0.00 0.00 2.85
2977 3252 1.566018 CGAGGTTGTTGTCGCTTCCC 61.566 60.000 0.00 0.00 0.00 3.97
2980 3255 1.213094 CGTCGAGGTTGTTGTCGCTT 61.213 55.000 0.00 0.00 36.11 4.68
3073 3354 1.292223 CTGGGTGTGACGGTGGTAG 59.708 63.158 0.00 0.00 0.00 3.18
3244 3525 1.271926 CCCTGGACGGATGAAGGTTTT 60.272 52.381 0.00 0.00 33.16 2.43
3245 3526 0.328258 CCCTGGACGGATGAAGGTTT 59.672 55.000 0.00 0.00 33.16 3.27
3246 3527 0.840722 ACCCTGGACGGATGAAGGTT 60.841 55.000 0.00 0.00 33.16 3.50
3248 3529 1.522569 GACCCTGGACGGATGAAGG 59.477 63.158 0.00 0.00 33.16 3.46
3249 3530 1.264749 TGGACCCTGGACGGATGAAG 61.265 60.000 0.00 0.00 33.16 3.02
3250 3531 0.620410 ATGGACCCTGGACGGATGAA 60.620 55.000 0.00 0.00 33.16 2.57
3251 3532 1.002921 ATGGACCCTGGACGGATGA 59.997 57.895 0.00 0.00 33.16 2.92
3252 3533 1.447643 GATGGACCCTGGACGGATG 59.552 63.158 0.00 0.00 33.16 3.51
3257 3538 1.152881 GCATGGATGGACCCTGGAC 60.153 63.158 0.00 0.00 35.33 4.02
3260 3541 1.820906 CGTGCATGGATGGACCCTG 60.821 63.158 5.77 0.00 44.96 4.45
3261 3542 1.348008 ATCGTGCATGGATGGACCCT 61.348 55.000 5.98 0.00 44.96 4.34
3263 3544 0.886490 GGATCGTGCATGGATGGACC 60.886 60.000 5.98 6.79 44.96 4.46
3264 3545 0.179048 TGGATCGTGCATGGATGGAC 60.179 55.000 5.98 1.38 44.42 4.02
3266 3547 1.538512 GAATGGATCGTGCATGGATGG 59.461 52.381 5.98 0.00 0.00 3.51
3267 3548 1.538512 GGAATGGATCGTGCATGGATG 59.461 52.381 5.98 0.00 0.00 3.51
3268 3549 1.143481 TGGAATGGATCGTGCATGGAT 59.857 47.619 5.98 4.41 0.00 3.41
3269 3550 0.545646 TGGAATGGATCGTGCATGGA 59.454 50.000 5.98 0.00 0.00 3.41
3271 3552 2.699251 CATGGAATGGATCGTGCATG 57.301 50.000 0.00 0.00 41.79 4.06
3290 3571 2.093658 CGTATGGTATGGGCTATGGACC 60.094 54.545 0.00 0.00 42.24 4.46
3299 3580 1.540363 GGCACTGACGTATGGTATGGG 60.540 57.143 0.00 0.00 0.00 4.00
3895 4176 2.126580 GACAACGTCCGTCTCCCG 60.127 66.667 10.07 0.00 0.00 5.14
3936 4217 1.485838 GCACGTCCATGAGCATCTCG 61.486 60.000 0.00 0.00 34.92 4.04
4299 4583 0.901827 ACAGATCGTGTACCATGGCA 59.098 50.000 13.04 0.00 37.75 4.92
4308 4592 1.614241 GGGGCCTGTACAGATCGTGT 61.614 60.000 24.68 3.77 43.86 4.49
4323 4607 2.352805 CCAGAGTTCACCAGGGGC 59.647 66.667 0.00 0.00 0.00 5.80
4393 4677 4.598894 CATAGCGCTCGCCAGCCT 62.599 66.667 16.34 0.00 43.56 4.58
4527 4811 2.646719 GTCGTCCACTGGTGCGTA 59.353 61.111 12.20 0.00 0.00 4.42
4791 5075 3.264866 GACGTTGACGCGGAGGAGT 62.265 63.158 12.47 4.57 44.43 3.85
4837 5125 2.879756 GCCATGAAACAGGAGGCAGTAA 60.880 50.000 0.00 0.00 44.59 2.24
4842 5130 0.685458 ATGGCCATGAAACAGGAGGC 60.685 55.000 20.04 0.00 44.48 4.70
4856 5145 2.359850 TCGTTGTCAGCCATGGCC 60.360 61.111 33.14 18.48 43.17 5.36
5095 5396 2.202544 GCGACAGTGAGGAGCGAG 60.203 66.667 0.00 0.00 0.00 5.03
5107 5408 1.667154 CGAGGATCTGGAAGGCGACA 61.667 60.000 0.00 0.00 0.00 4.35
5285 5586 3.765511 TGACCTACTACTTACCATTGCGT 59.234 43.478 0.00 0.00 0.00 5.24
5304 5605 4.083855 TCACTTCATGCATTCGTTCTTGAC 60.084 41.667 0.00 0.00 0.00 3.18
5341 5642 5.698089 TGATATCGAATCAGCAATTCCAGTC 59.302 40.000 0.00 2.28 40.69 3.51
5343 5644 6.738832 ATGATATCGAATCAGCAATTCCAG 57.261 37.500 13.25 0.00 40.69 3.86
5358 5659 6.475402 GCCCAAAACCAAGTAAAATGATATCG 59.525 38.462 0.00 0.00 0.00 2.92
5363 5664 4.202305 CCTGCCCAAAACCAAGTAAAATGA 60.202 41.667 0.00 0.00 0.00 2.57
5381 5683 1.835693 CCCCTCTTGATCTCCTGCC 59.164 63.158 0.00 0.00 0.00 4.85
5538 5840 3.006110 GTGGTGATTGGATTATGCATGGG 59.994 47.826 10.16 0.00 0.00 4.00
5568 5870 1.000270 TTGTGCTTGTGGTGGTGGT 60.000 52.632 0.00 0.00 0.00 4.16
5569 5871 1.318886 TGTTGTGCTTGTGGTGGTGG 61.319 55.000 0.00 0.00 0.00 4.61
5570 5872 0.179140 GTGTTGTGCTTGTGGTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
5571 5873 1.319614 GGTGTTGTGCTTGTGGTGGT 61.320 55.000 0.00 0.00 0.00 4.16
5572 5874 1.318886 TGGTGTTGTGCTTGTGGTGG 61.319 55.000 0.00 0.00 0.00 4.61
5573 5875 0.746063 ATGGTGTTGTGCTTGTGGTG 59.254 50.000 0.00 0.00 0.00 4.17
5577 5879 5.237127 CGATATATGATGGTGTTGTGCTTGT 59.763 40.000 0.00 0.00 0.00 3.16
5597 5899 2.115427 TGGTCCCTTCATCTTGCGATA 58.885 47.619 0.00 0.00 0.00 2.92
5598 5900 0.911769 TGGTCCCTTCATCTTGCGAT 59.088 50.000 0.00 0.00 0.00 4.58
5599 5901 0.690192 TTGGTCCCTTCATCTTGCGA 59.310 50.000 0.00 0.00 0.00 5.10
5600 5902 0.804989 GTTGGTCCCTTCATCTTGCG 59.195 55.000 0.00 0.00 0.00 4.85
5664 5966 1.130938 TGACATGTCAATGCGTGCATC 59.869 47.619 26.02 0.00 37.29 3.91
5714 6016 5.894298 AATGTGTAGATGAGCTGGGATTA 57.106 39.130 0.00 0.00 0.00 1.75
5782 6084 9.398170 GCATGCAAATGATAACGTAATTAAGAT 57.602 29.630 14.21 0.00 0.00 2.40
5793 6095 4.684877 TGTCATGGCATGCAAATGATAAC 58.315 39.130 27.92 19.82 33.19 1.89
5795 6097 5.340439 TTTGTCATGGCATGCAAATGATA 57.660 34.783 29.27 24.32 34.11 2.15
5828 6130 1.066257 AAAGTGTTGCCTGCTTGCG 59.934 52.632 0.00 0.00 0.00 4.85
5900 6206 0.906756 TTCTGGAGAGGGACTGGCAG 60.907 60.000 14.16 14.16 41.55 4.85
5980 6287 3.951037 TGGAGCACTACACAACAAAACAT 59.049 39.130 0.00 0.00 0.00 2.71
6011 6318 2.284625 AGACGACCCCTCCATGCA 60.285 61.111 0.00 0.00 0.00 3.96
6062 6369 5.460748 GGTCCAAATTAAACAGTTCCAAACG 59.539 40.000 0.00 0.00 36.23 3.60
6108 6415 0.958091 CAAACAACCCAGCCGATTGA 59.042 50.000 0.00 0.00 0.00 2.57
6162 6474 7.432869 TGGTTGTTTCTCTGGTATTTGATTTG 58.567 34.615 0.00 0.00 0.00 2.32
6200 6512 3.851976 AGACAACCGTCAGACTGTATC 57.148 47.619 1.59 0.40 45.23 2.24
6201 6513 4.602340 AAAGACAACCGTCAGACTGTAT 57.398 40.909 1.59 0.00 45.23 2.29
6202 6514 4.395959 AAAAGACAACCGTCAGACTGTA 57.604 40.909 1.59 0.00 45.23 2.74
6203 6515 2.981859 AAAGACAACCGTCAGACTGT 57.018 45.000 1.59 0.00 45.23 3.55
6226 6541 4.021456 TCATTTACGTCCTTCAGAGCTGAA 60.021 41.667 11.98 11.98 46.27 3.02
6227 6542 3.509967 TCATTTACGTCCTTCAGAGCTGA 59.490 43.478 0.00 0.00 37.91 4.26
6228 6543 3.849911 TCATTTACGTCCTTCAGAGCTG 58.150 45.455 0.00 0.00 0.00 4.24
6229 6544 4.404073 AGATCATTTACGTCCTTCAGAGCT 59.596 41.667 0.00 0.00 0.00 4.09
6230 6545 4.688021 AGATCATTTACGTCCTTCAGAGC 58.312 43.478 0.00 0.00 0.00 4.09
6231 6546 7.602517 AAAAGATCATTTACGTCCTTCAGAG 57.397 36.000 0.00 0.00 0.00 3.35
6232 6547 7.659799 TGAAAAAGATCATTTACGTCCTTCAGA 59.340 33.333 0.00 0.00 0.00 3.27
6233 6548 7.806690 TGAAAAAGATCATTTACGTCCTTCAG 58.193 34.615 0.00 0.00 0.00 3.02
6234 6549 7.737972 TGAAAAAGATCATTTACGTCCTTCA 57.262 32.000 0.00 0.00 0.00 3.02
6288 6603 9.834628 GTTTGAAATGTTTTATACTTCCGATGA 57.165 29.630 0.00 0.00 0.00 2.92
6289 6604 9.619316 TGTTTGAAATGTTTTATACTTCCGATG 57.381 29.630 0.00 0.00 0.00 3.84
6318 6633 9.449719 GTCCATGGACCTCGATATAATTTTTAT 57.550 33.333 31.37 0.00 39.08 1.40
6319 6634 8.842358 GTCCATGGACCTCGATATAATTTTTA 57.158 34.615 31.37 0.00 39.08 1.52
6320 6635 7.745620 GTCCATGGACCTCGATATAATTTTT 57.254 36.000 31.37 0.00 39.08 1.94
6335 6650 4.296265 GTTCGGTGGTCCATGGAC 57.704 61.111 33.14 33.14 43.87 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.