Multiple sequence alignment - TraesCS7A01G304700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G304700 chr7A 100.000 4000 0 0 1000 4999 428919943 428915944 0.000000e+00 7387.0
1 TraesCS7A01G304700 chr7A 100.000 1365 0 0 5250 6614 428915693 428914329 0.000000e+00 2521.0
2 TraesCS7A01G304700 chr7A 100.000 808 0 0 1 808 428920942 428920135 0.000000e+00 1493.0
3 TraesCS7A01G304700 chr7D 96.107 4007 122 13 1000 4999 380632181 380628202 0.000000e+00 6505.0
4 TraesCS7A01G304700 chr7D 88.955 670 41 20 5549 6210 380627587 380626943 0.000000e+00 797.0
5 TraesCS7A01G304700 chr7D 85.366 205 12 6 5343 5547 380627887 380627701 5.230000e-46 196.0
6 TraesCS7A01G304700 chr7B 93.242 2693 109 41 1000 3685 375390225 375387599 0.000000e+00 3897.0
7 TraesCS7A01G304700 chr7B 96.257 668 20 4 3736 4401 375387596 375386932 0.000000e+00 1090.0
8 TraesCS7A01G304700 chr7B 95.122 574 21 5 4420 4991 375386763 375386195 0.000000e+00 898.0
9 TraesCS7A01G304700 chr7B 84.127 756 57 29 5549 6277 375385517 375384798 0.000000e+00 673.0
10 TraesCS7A01G304700 chr7B 87.365 277 24 4 5273 5547 375385825 375385558 2.320000e-79 307.0
11 TraesCS7A01G304700 chr7B 92.568 148 6 4 661 808 375390427 375390285 2.420000e-49 207.0
12 TraesCS7A01G304700 chr6A 83.749 1163 154 15 2263 3404 614606157 614605009 0.000000e+00 1068.0
13 TraesCS7A01G304700 chr6A 86.667 615 82 0 1 615 440285128 440284514 0.000000e+00 682.0
14 TraesCS7A01G304700 chr6A 86.577 149 19 1 3794 3942 614604644 614604497 5.310000e-36 163.0
15 TraesCS7A01G304700 chr6A 83.636 165 23 4 4595 4756 614603856 614603693 1.150000e-32 152.0
16 TraesCS7A01G304700 chr6B 81.235 1215 168 34 2267 3451 715696723 715695539 0.000000e+00 926.0
17 TraesCS7A01G304700 chr6B 78.519 270 47 9 4595 4858 715694440 715694176 4.100000e-37 167.0
18 TraesCS7A01G304700 chr6B 85.333 150 21 1 3794 3943 715695233 715695085 3.190000e-33 154.0
19 TraesCS7A01G304700 chr3B 86.753 619 82 0 2 620 179644539 179645157 0.000000e+00 689.0
20 TraesCS7A01G304700 chr3B 86.174 622 82 4 1 620 514931724 514931105 0.000000e+00 669.0
21 TraesCS7A01G304700 chr3D 85.668 621 87 2 1 620 502957452 502956833 0.000000e+00 652.0
22 TraesCS7A01G304700 chr3D 88.608 79 7 2 4528 4605 250918731 250918808 1.960000e-15 95.3
23 TraesCS7A01G304700 chr1D 85.668 621 87 2 1 620 439652016 439651397 0.000000e+00 652.0
24 TraesCS7A01G304700 chr5D 85.507 621 88 2 1 620 384150248 384149629 0.000000e+00 647.0
25 TraesCS7A01G304700 chr5D 91.429 70 6 0 4527 4596 28480019 28479950 5.460000e-16 97.1
26 TraesCS7A01G304700 chr4B 83.495 618 100 2 4 620 60365592 60364976 5.750000e-160 575.0
27 TraesCS7A01G304700 chr4B 100.000 28 0 0 630 657 507964006 507964033 1.200000e-02 52.8
28 TraesCS7A01G304700 chr1B 79.138 441 71 16 2758 3187 526212951 526212521 1.090000e-72 285.0
29 TraesCS7A01G304700 chr1B 78.995 438 77 14 2758 3187 526228564 526228134 1.090000e-72 285.0
30 TraesCS7A01G304700 chr1B 97.297 37 1 0 623 659 22206765 22206729 5.540000e-06 63.9
31 TraesCS7A01G304700 chr2A 90.000 80 8 0 4520 4599 34328205 34328126 3.260000e-18 104.0
32 TraesCS7A01G304700 chr1A 85.294 102 14 1 4506 4606 255486669 255486770 3.260000e-18 104.0
33 TraesCS7A01G304700 chr3A 92.857 70 5 0 4527 4596 494725291 494725222 1.170000e-17 102.0
34 TraesCS7A01G304700 chr4A 92.754 69 5 0 4529 4597 594380269 594380337 4.220000e-17 100.0
35 TraesCS7A01G304700 chr5B 89.041 73 7 1 4527 4598 700595012 700594940 9.140000e-14 89.8
36 TraesCS7A01G304700 chr5A 89.583 48 4 1 623 669 708803947 708803900 7.160000e-05 60.2
37 TraesCS7A01G304700 chrUn 100.000 28 0 0 623 650 85476084 85476057 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G304700 chr7A 428914329 428920942 6613 True 3800.333333 7387 100.000000 1 6614 3 chr7A.!!$R1 6613
1 TraesCS7A01G304700 chr7D 380626943 380632181 5238 True 2499.333333 6505 90.142667 1000 6210 3 chr7D.!!$R1 5210
2 TraesCS7A01G304700 chr7B 375384798 375390427 5629 True 1178.666667 3897 91.446833 661 6277 6 chr7B.!!$R1 5616
3 TraesCS7A01G304700 chr6A 440284514 440285128 614 True 682.000000 682 86.667000 1 615 1 chr6A.!!$R1 614
4 TraesCS7A01G304700 chr6A 614603693 614606157 2464 True 461.000000 1068 84.654000 2263 4756 3 chr6A.!!$R2 2493
5 TraesCS7A01G304700 chr6B 715694176 715696723 2547 True 415.666667 926 81.695667 2267 4858 3 chr6B.!!$R1 2591
6 TraesCS7A01G304700 chr3B 179644539 179645157 618 False 689.000000 689 86.753000 2 620 1 chr3B.!!$F1 618
7 TraesCS7A01G304700 chr3B 514931105 514931724 619 True 669.000000 669 86.174000 1 620 1 chr3B.!!$R1 619
8 TraesCS7A01G304700 chr3D 502956833 502957452 619 True 652.000000 652 85.668000 1 620 1 chr3D.!!$R1 619
9 TraesCS7A01G304700 chr1D 439651397 439652016 619 True 652.000000 652 85.668000 1 620 1 chr1D.!!$R1 619
10 TraesCS7A01G304700 chr5D 384149629 384150248 619 True 647.000000 647 85.507000 1 620 1 chr5D.!!$R2 619
11 TraesCS7A01G304700 chr4B 60364976 60365592 616 True 575.000000 575 83.495000 4 620 1 chr4B.!!$R1 616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 527 0.031314 CTCATCATCGACCAGGACCG 59.969 60.000 0.00 0.0 0.00 4.79 F
659 660 0.036671 CTCCCCGTTACAACCAGTCC 60.037 60.000 0.00 0.0 0.00 3.85 F
708 709 0.391597 CCCACGTATATCGGCCACTT 59.608 55.000 2.24 0.0 44.69 3.16 F
2009 2010 0.035056 ACCCAGCCTTGATTTCTCCG 60.035 55.000 0.00 0.0 0.00 4.63 F
3180 3204 2.076863 GTAGTGTGTCATTGCCAGGTC 58.923 52.381 0.00 0.0 0.00 3.85 F
4096 4274 0.947244 GCTGATTATGAAGCGGGTGG 59.053 55.000 0.00 0.0 0.00 4.61 F
4849 5187 0.252881 TCCTCATCCCCTGTGCTTCT 60.253 55.000 0.00 0.0 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1956 1957 0.032678 CTACTGGCGCTCCCATACAG 59.967 60.000 7.64 6.70 44.33 2.74 R
2005 2006 1.819288 TCTAGTTTGACAGAGCCGGAG 59.181 52.381 5.05 0.00 0.00 4.63 R
2656 2666 6.605594 ACACCTGTGAAGTAAGGAAAAATGAA 59.394 34.615 3.94 0.00 37.01 2.57 R
3567 3618 0.105593 ACACAGTGCAGACCAGACTG 59.894 55.000 0.00 0.00 42.39 3.51 R
4652 4989 1.670811 CACGAACAGGCTGAAAAGTGT 59.329 47.619 23.66 7.56 0.00 3.55 R
5273 5611 0.383949 GGTTTGTTCCGCTGCTTTGA 59.616 50.000 0.00 0.00 0.00 2.69 R
6415 7000 0.033306 AGGTCGGGGTAGAACTCCTC 60.033 60.000 0.00 0.00 36.29 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.920640 TCCGAAGAGTCTATCATGTTCC 57.079 45.455 0.00 0.00 0.00 3.62
51 52 2.363711 TATCCGCCGCAAGTGCTAGG 62.364 60.000 1.21 2.37 39.32 3.02
115 116 2.158415 ACCCCTACTATTACCAGCGCTA 60.158 50.000 10.99 0.00 0.00 4.26
129 130 3.366883 CCAGCGCTAAACTGCCAATAAAA 60.367 43.478 10.99 0.00 33.65 1.52
132 133 6.033341 CAGCGCTAAACTGCCAATAAAATTA 58.967 36.000 10.99 0.00 0.00 1.40
135 136 6.326375 CGCTAAACTGCCAATAAAATTACCA 58.674 36.000 0.00 0.00 0.00 3.25
137 138 7.167468 CGCTAAACTGCCAATAAAATTACCATC 59.833 37.037 0.00 0.00 0.00 3.51
207 208 3.591023 TGCTGCATCAACATGGATTTTG 58.409 40.909 0.00 0.00 28.54 2.44
224 225 2.029964 GTGAAAGCCCGTCGGTGA 59.970 61.111 11.06 0.00 0.00 4.02
249 250 2.757917 GGCCTCAGAGCTCGTCCT 60.758 66.667 8.37 0.00 0.00 3.85
252 253 1.599606 GCCTCAGAGCTCGTCCTTGA 61.600 60.000 8.37 5.24 0.00 3.02
262 263 1.819288 CTCGTCCTTGAACTGGAGCTA 59.181 52.381 0.00 0.00 33.78 3.32
357 358 6.422333 TGTCACATGAGGGCTTTGAAATATA 58.578 36.000 0.00 0.00 0.00 0.86
363 364 5.445964 TGAGGGCTTTGAAATATACCTTCC 58.554 41.667 0.00 0.00 0.00 3.46
473 474 0.102300 AACAACCAGTTCTTTGCGCC 59.898 50.000 4.18 0.00 34.74 6.53
503 504 5.335583 CCGTGGTTGATATCAATTGTTGTGT 60.336 40.000 20.65 0.00 38.24 3.72
523 524 2.625314 GTCATCTCATCATCGACCAGGA 59.375 50.000 0.00 0.00 0.00 3.86
526 527 0.031314 CTCATCATCGACCAGGACCG 59.969 60.000 0.00 0.00 0.00 4.79
568 569 7.030165 CGTACAGTTCATAAGTGAATGTCTCT 58.970 38.462 1.63 0.00 45.46 3.10
620 621 1.016130 GGTGAGTCTGTCATGTGCCG 61.016 60.000 0.00 0.00 37.56 5.69
621 622 1.016130 GTGAGTCTGTCATGTGCCGG 61.016 60.000 0.00 0.00 37.56 6.13
622 623 1.293498 GAGTCTGTCATGTGCCGGT 59.707 57.895 1.90 0.00 0.00 5.28
623 624 1.004560 AGTCTGTCATGTGCCGGTG 60.005 57.895 1.90 0.00 0.00 4.94
624 625 1.005037 GTCTGTCATGTGCCGGTGA 60.005 57.895 1.90 0.00 0.00 4.02
625 626 0.391661 GTCTGTCATGTGCCGGTGAT 60.392 55.000 1.90 0.00 0.00 3.06
626 627 1.134818 GTCTGTCATGTGCCGGTGATA 60.135 52.381 1.90 0.00 0.00 2.15
627 628 1.134818 TCTGTCATGTGCCGGTGATAC 60.135 52.381 1.90 0.00 0.00 2.24
628 629 0.901827 TGTCATGTGCCGGTGATACT 59.098 50.000 1.90 0.00 0.00 2.12
629 630 2.100749 CTGTCATGTGCCGGTGATACTA 59.899 50.000 1.90 0.00 0.00 1.82
630 631 2.100749 TGTCATGTGCCGGTGATACTAG 59.899 50.000 1.90 0.00 0.00 2.57
631 632 2.100916 GTCATGTGCCGGTGATACTAGT 59.899 50.000 1.90 0.00 0.00 2.57
632 633 3.317149 GTCATGTGCCGGTGATACTAGTA 59.683 47.826 4.77 4.77 0.00 1.82
633 634 4.022242 GTCATGTGCCGGTGATACTAGTAT 60.022 45.833 15.37 15.37 0.00 2.12
634 635 5.182570 GTCATGTGCCGGTGATACTAGTATA 59.817 44.000 15.42 2.21 0.00 1.47
635 636 5.949952 TCATGTGCCGGTGATACTAGTATAT 59.050 40.000 15.42 0.00 0.00 0.86
636 637 7.066645 GTCATGTGCCGGTGATACTAGTATATA 59.933 40.741 15.42 5.41 0.00 0.86
637 638 7.612633 TCATGTGCCGGTGATACTAGTATATAA 59.387 37.037 15.42 2.19 0.00 0.98
638 639 7.949690 TGTGCCGGTGATACTAGTATATAAT 57.050 36.000 15.42 0.00 0.00 1.28
639 640 9.636789 ATGTGCCGGTGATACTAGTATATAATA 57.363 33.333 15.42 0.00 0.00 0.98
640 641 8.896744 TGTGCCGGTGATACTAGTATATAATAC 58.103 37.037 15.42 9.44 0.00 1.89
641 642 9.118300 GTGCCGGTGATACTAGTATATAATACT 57.882 37.037 15.42 5.04 0.00 2.12
642 643 9.334947 TGCCGGTGATACTAGTATATAATACTC 57.665 37.037 15.42 2.44 0.00 2.59
643 644 8.782144 GCCGGTGATACTAGTATATAATACTCC 58.218 40.741 15.42 10.63 0.00 3.85
644 645 9.282569 CCGGTGATACTAGTATATAATACTCCC 57.717 40.741 15.42 6.00 0.00 4.30
645 646 9.282569 CGGTGATACTAGTATATAATACTCCCC 57.717 40.741 15.42 1.88 0.00 4.81
646 647 9.282569 GGTGATACTAGTATATAATACTCCCCG 57.717 40.741 15.42 0.00 0.00 5.73
647 648 9.844257 GTGATACTAGTATATAATACTCCCCGT 57.156 37.037 15.42 1.36 0.00 5.28
654 655 8.127150 AGTATATAATACTCCCCGTTACAACC 57.873 38.462 0.00 0.00 0.00 3.77
655 656 6.999705 ATATAATACTCCCCGTTACAACCA 57.000 37.500 0.00 0.00 0.00 3.67
656 657 3.622166 AATACTCCCCGTTACAACCAG 57.378 47.619 0.00 0.00 0.00 4.00
657 658 2.014010 TACTCCCCGTTACAACCAGT 57.986 50.000 0.00 0.00 0.00 4.00
658 659 0.683412 ACTCCCCGTTACAACCAGTC 59.317 55.000 0.00 0.00 0.00 3.51
659 660 0.036671 CTCCCCGTTACAACCAGTCC 60.037 60.000 0.00 0.00 0.00 3.85
671 672 1.420430 ACCAGTCCGAGGAAAGACAA 58.580 50.000 0.00 0.00 35.38 3.18
702 703 1.403780 GCTTAGGCCCACGTATATCGG 60.404 57.143 0.00 0.00 44.69 4.18
704 705 1.252904 TAGGCCCACGTATATCGGCC 61.253 60.000 16.76 16.76 44.69 6.13
705 706 2.738480 GCCCACGTATATCGGCCA 59.262 61.111 2.24 0.00 44.69 5.36
706 707 1.666872 GCCCACGTATATCGGCCAC 60.667 63.158 2.24 0.00 44.69 5.01
707 708 2.046938 CCCACGTATATCGGCCACT 58.953 57.895 2.24 0.00 44.69 4.00
708 709 0.391597 CCCACGTATATCGGCCACTT 59.608 55.000 2.24 0.00 44.69 3.16
756 757 4.658063 TGTTTTTCAGGGAACGTATGGAT 58.342 39.130 0.00 0.00 0.00 3.41
790 791 1.805945 CCCGTCTGCGCAGAACTAC 60.806 63.158 39.63 26.48 39.48 2.73
1095 1096 2.771762 GCTCCTGATGCCTCCCCT 60.772 66.667 0.00 0.00 0.00 4.79
1218 1219 0.461961 GCGAGGAGTGTATTCAGCCT 59.538 55.000 0.00 0.00 33.88 4.58
1284 1285 3.069318 GACGGGTTCGAGCCCTCT 61.069 66.667 31.58 18.41 46.47 3.69
1395 1396 1.139058 CCAGGAGGATACCTTCGGTTG 59.861 57.143 0.00 0.00 38.32 3.77
1396 1397 1.831736 CAGGAGGATACCTTCGGTTGT 59.168 52.381 0.00 0.00 38.32 3.32
1421 1422 4.019771 AGGAAGAGTTCTTGGACAGGAATC 60.020 45.833 0.00 0.87 36.11 2.52
1466 1467 8.822855 CGTTACCAAATTTATGAGTGCAGTATA 58.177 33.333 0.00 0.00 0.00 1.47
1610 1611 7.806180 AGAAGGTTATCACTTAGCATGGTATT 58.194 34.615 5.28 0.00 0.00 1.89
1883 1884 6.551385 ACAAAGAGAGAGTGTGCAAAATAG 57.449 37.500 0.00 0.00 0.00 1.73
1884 1885 6.058183 ACAAAGAGAGAGTGTGCAAAATAGT 58.942 36.000 0.00 0.00 0.00 2.12
1956 1957 3.385577 GGAGCACTATCCTGATTCGTTC 58.614 50.000 0.00 0.00 36.35 3.95
1962 1963 5.403766 GCACTATCCTGATTCGTTCTGTATG 59.596 44.000 0.00 0.00 0.00 2.39
2005 2006 6.775629 TGGTTATAATACCCAGCCTTGATTTC 59.224 38.462 0.00 0.00 37.39 2.17
2009 2010 0.035056 ACCCAGCCTTGATTTCTCCG 60.035 55.000 0.00 0.00 0.00 4.63
2399 2400 3.709141 AGCTAAACAACAAAATGGGTGGT 59.291 39.130 0.00 0.00 0.00 4.16
2650 2660 9.030301 CCAAAGTTCGAACTCAAACATAATTTT 57.970 29.630 29.82 13.52 38.57 1.82
2653 2663 6.640907 AGTTCGAACTCAAACATAATTTTGCC 59.359 34.615 24.93 0.00 36.56 4.52
2656 2666 7.151308 TCGAACTCAAACATAATTTTGCCATT 58.849 30.769 0.00 0.00 36.56 3.16
2814 2834 3.058224 GCAGACACCGCTCTGTAAAATTT 60.058 43.478 3.00 0.00 40.03 1.82
2815 2835 4.556699 GCAGACACCGCTCTGTAAAATTTT 60.557 41.667 8.75 8.75 40.03 1.82
3180 3204 2.076863 GTAGTGTGTCATTGCCAGGTC 58.923 52.381 0.00 0.00 0.00 3.85
3187 3211 4.127171 GTGTCATTGCCAGGTCGTATAAT 58.873 43.478 0.00 0.00 0.00 1.28
3268 3292 4.753233 AGAAGATGTCAAAGAGTGATCCG 58.247 43.478 0.00 0.00 38.90 4.18
3304 3328 8.553085 TCTTTATGGAAGATGATGAGGTTCTA 57.447 34.615 0.00 0.00 39.44 2.10
3361 3389 5.893255 TCAAAAGCTTATGCCACCTAATCAT 59.107 36.000 0.00 0.00 40.80 2.45
3440 3485 6.183361 GGATATTGTAGGGTATGGTCCTTGTT 60.183 42.308 0.00 0.00 35.92 2.83
3470 3515 4.619160 GCAAGAAAATGAAGCCCTAACCAG 60.619 45.833 0.00 0.00 0.00 4.00
3499 3544 4.590918 TGGATGTTAGGTTTGGCGATTTA 58.409 39.130 0.00 0.00 0.00 1.40
3544 3590 6.771188 ATGCGTAGACATGTTATTTCTAGC 57.229 37.500 0.00 3.49 0.00 3.42
3608 3665 7.141363 GTGTTCATCATTTGCTTAGAACTTGT 58.859 34.615 0.00 0.00 37.03 3.16
3609 3666 7.324616 GTGTTCATCATTTGCTTAGAACTTGTC 59.675 37.037 0.00 0.00 37.03 3.18
3610 3667 7.229306 TGTTCATCATTTGCTTAGAACTTGTCT 59.771 33.333 0.00 0.00 40.71 3.41
3611 3668 7.750229 TCATCATTTGCTTAGAACTTGTCTT 57.250 32.000 0.00 0.00 37.84 3.01
3612 3669 8.169977 TCATCATTTGCTTAGAACTTGTCTTT 57.830 30.769 0.00 0.00 37.84 2.52
3613 3670 8.077991 TCATCATTTGCTTAGAACTTGTCTTTG 58.922 33.333 0.00 0.00 37.84 2.77
3718 3786 2.433970 TCAAGGTTTTGCCCTTTTCCTG 59.566 45.455 0.00 0.00 42.24 3.86
3994 4167 9.628500 ACCTTAGTTAATCTCTGTTGAAAGTTT 57.372 29.630 0.00 0.00 0.00 2.66
4070 4248 6.153340 ACAGGACATTTTTAACCATGGATGAG 59.847 38.462 21.47 6.34 0.00 2.90
4096 4274 0.947244 GCTGATTATGAAGCGGGTGG 59.053 55.000 0.00 0.00 0.00 4.61
4385 4571 4.849926 CGCTGCATATCTCATATTTTGTGC 59.150 41.667 0.00 0.00 0.00 4.57
4541 4878 7.711339 ACTCCCATCTGAAAATATAAGACGTTC 59.289 37.037 0.00 0.00 0.00 3.95
4652 4989 9.041354 AGATTTGTTTGGCCTAATACCATTTTA 57.959 29.630 3.32 0.00 36.96 1.52
4849 5187 0.252881 TCCTCATCCCCTGTGCTTCT 60.253 55.000 0.00 0.00 0.00 2.85
4893 5231 3.452474 CAAGTTGCCGGTTTCATTTTGA 58.548 40.909 1.90 0.00 0.00 2.69
4894 5232 3.810310 AGTTGCCGGTTTCATTTTGAA 57.190 38.095 1.90 0.00 34.03 2.69
4895 5233 4.130286 AGTTGCCGGTTTCATTTTGAAA 57.870 36.364 1.90 0.00 43.37 2.69
4963 5301 9.413148 TGGGTTAATATATTTCCCCTGAATCTA 57.587 33.333 23.77 9.53 37.52 1.98
5274 5612 6.681729 TGTCCCCACCTGAATATATTACTC 57.318 41.667 0.00 0.00 0.00 2.59
5282 5709 7.308229 CCACCTGAATATATTACTCAAAGCAGC 60.308 40.741 0.00 0.00 0.00 5.25
5288 5715 2.248280 TTACTCAAAGCAGCGGAACA 57.752 45.000 0.00 0.00 0.00 3.18
5292 5719 0.383949 TCAAAGCAGCGGAACAAACC 59.616 50.000 0.00 0.00 0.00 3.27
5329 5756 3.388345 TTACATAGGCACGTTGACACA 57.612 42.857 0.00 0.00 0.00 3.72
5349 5776 1.048601 TGAGGACAGGAAAGAACGCT 58.951 50.000 0.00 0.00 0.00 5.07
5367 5794 1.977412 GCTACGAGAACACGTCTTCAC 59.023 52.381 6.33 0.00 45.32 3.18
5388 5816 6.837992 TCACTATATCCGTTTGCTTTTTGAC 58.162 36.000 0.00 0.00 0.00 3.18
5436 5864 2.569059 AGGCATAGCTGTGCATACTTG 58.431 47.619 32.58 0.00 46.81 3.16
5465 5893 6.345250 GCATTTGTTCAGTTTGACTTCGAATG 60.345 38.462 0.00 0.00 32.75 2.67
5467 5895 5.155509 TGTTCAGTTTGACTTCGAATGTG 57.844 39.130 0.00 0.00 0.00 3.21
5475 5903 3.690422 TGACTTCGAATGTGTGTTTTGC 58.310 40.909 0.00 0.00 0.00 3.68
5476 5904 3.127721 TGACTTCGAATGTGTGTTTTGCA 59.872 39.130 0.00 0.00 0.00 4.08
5477 5905 4.101942 GACTTCGAATGTGTGTTTTGCAA 58.898 39.130 0.00 0.00 0.00 4.08
5478 5906 4.104776 ACTTCGAATGTGTGTTTTGCAAG 58.895 39.130 0.00 0.00 0.00 4.01
5479 5907 3.077229 TCGAATGTGTGTTTTGCAAGG 57.923 42.857 0.00 0.00 0.00 3.61
5480 5908 2.685388 TCGAATGTGTGTTTTGCAAGGA 59.315 40.909 0.00 0.00 0.00 3.36
5481 5909 3.129462 TCGAATGTGTGTTTTGCAAGGAA 59.871 39.130 0.00 0.00 0.00 3.36
5482 5910 4.050553 CGAATGTGTGTTTTGCAAGGAAT 58.949 39.130 0.00 0.00 0.00 3.01
5483 5911 4.507388 CGAATGTGTGTTTTGCAAGGAATT 59.493 37.500 0.00 0.00 0.00 2.17
5484 5912 5.006552 CGAATGTGTGTTTTGCAAGGAATTT 59.993 36.000 0.00 0.00 0.00 1.82
5485 5913 6.199908 CGAATGTGTGTTTTGCAAGGAATTTA 59.800 34.615 0.00 0.00 0.00 1.40
5486 5914 7.254252 CGAATGTGTGTTTTGCAAGGAATTTAA 60.254 33.333 0.00 0.00 0.00 1.52
5487 5915 8.449251 AATGTGTGTTTTGCAAGGAATTTAAT 57.551 26.923 0.00 0.00 0.00 1.40
5490 5918 7.550551 TGTGTGTTTTGCAAGGAATTTAATCAA 59.449 29.630 0.00 0.00 0.00 2.57
5492 5920 9.770097 TGTGTTTTGCAAGGAATTTAATCAATA 57.230 25.926 0.00 0.00 0.00 1.90
5528 5956 9.886132 ACGGTAATCAATACTTCAAACTCTTAT 57.114 29.630 0.00 0.00 34.74 1.73
5547 5975 9.196139 ACTCTTATGGGTTCTAGATATATCTGC 57.804 37.037 23.03 11.26 37.76 4.26
5684 6224 2.632028 AGCATACACATTTTGGTTGGCA 59.368 40.909 0.00 0.00 0.00 4.92
5692 6232 2.861462 TTTTGGTTGGCAGAGTTTCG 57.139 45.000 0.00 0.00 0.00 3.46
5710 6250 0.531532 CGTGGGCACAATTTTTGGCA 60.532 50.000 10.75 0.00 41.25 4.92
5806 6346 4.273480 CGTGTCACCTTCAATTGAGAAGTT 59.727 41.667 8.41 0.00 42.68 2.66
5807 6347 5.465390 CGTGTCACCTTCAATTGAGAAGTTA 59.535 40.000 8.41 0.00 42.68 2.24
5839 6379 2.936498 GGCGTGACATTGTAGCTAACAT 59.064 45.455 0.00 0.00 38.10 2.71
5937 6501 1.473434 GCCCTTACTAGCGCATTGACT 60.473 52.381 11.47 0.00 0.00 3.41
6000 6564 1.109323 GTTTCAAGTGCCCAGGCTGT 61.109 55.000 14.43 0.00 42.51 4.40
6037 6601 1.120437 CTCGCGTTTTGGAGTTTTGC 58.880 50.000 5.77 0.00 0.00 3.68
6038 6602 0.452184 TCGCGTTTTGGAGTTTTGCA 59.548 45.000 5.77 0.00 0.00 4.08
6042 6606 3.638484 GCGTTTTGGAGTTTTGCACTAT 58.362 40.909 0.00 0.00 35.01 2.12
6043 6607 3.668656 GCGTTTTGGAGTTTTGCACTATC 59.331 43.478 0.00 0.00 35.01 2.08
6064 6647 8.215050 ACTATCTAGCAGATACGCTATATCCTT 58.785 37.037 0.00 0.00 43.35 3.36
6077 6660 1.136828 TATCCTTGCCGGCCTGTAAT 58.863 50.000 26.77 13.45 0.00 1.89
6127 6710 4.335647 CAGTCCAAGCCTGCCCGT 62.336 66.667 0.00 0.00 0.00 5.28
6128 6711 4.021925 AGTCCAAGCCTGCCCGTC 62.022 66.667 0.00 0.00 0.00 4.79
6137 6720 0.895530 GCCTGCCCGTCAGCTATATA 59.104 55.000 0.00 0.00 41.50 0.86
6142 6725 3.349927 TGCCCGTCAGCTATATATACGT 58.650 45.455 0.00 0.00 31.87 3.57
6171 6754 3.359654 GGCTTTTTATGGTTCGCGTATG 58.640 45.455 5.77 0.00 0.00 2.39
6210 6795 0.107312 CCGTCCCTCTCGTCTCCTTA 60.107 60.000 0.00 0.00 0.00 2.69
6211 6796 1.301423 CGTCCCTCTCGTCTCCTTAG 58.699 60.000 0.00 0.00 0.00 2.18
6223 6808 4.525487 TCGTCTCCTTAGCTTTCTTTGGTA 59.475 41.667 0.00 0.00 0.00 3.25
6254 6839 2.861935 TCGCTCGTTTCTTTTCGTTTCT 59.138 40.909 0.00 0.00 0.00 2.52
6257 6842 3.208198 CTCGTTTCTTTTCGTTTCTCGC 58.792 45.455 0.00 0.00 39.67 5.03
6259 6844 2.346924 CGTTTCTTTTCGTTTCTCGCGA 60.347 45.455 9.26 9.26 39.67 5.87
6265 6850 1.785768 TTCGTTTCTCGCGAATCCAA 58.214 45.000 11.33 0.00 42.41 3.53
6269 6854 0.036388 TTTCTCGCGAATCCAAGGCT 60.036 50.000 11.33 0.00 0.00 4.58
6277 6862 0.251341 GAATCCAAGGCTGGTGGTGT 60.251 55.000 5.18 0.00 43.97 4.16
6278 6863 0.188342 AATCCAAGGCTGGTGGTGTT 59.812 50.000 5.18 0.17 43.97 3.32
6279 6864 0.251341 ATCCAAGGCTGGTGGTGTTC 60.251 55.000 5.18 0.00 43.97 3.18
6280 6865 2.260869 CCAAGGCTGGTGGTGTTCG 61.261 63.158 0.00 0.00 38.00 3.95
6281 6866 2.594592 AAGGCTGGTGGTGTTCGC 60.595 61.111 0.00 0.00 0.00 4.70
6282 6867 4.643387 AGGCTGGTGGTGTTCGCC 62.643 66.667 0.00 0.00 46.03 5.54
6319 6904 2.672996 GGAGCTCCTTGCCGCAAA 60.673 61.111 26.25 0.00 44.23 3.68
6320 6905 2.694760 GGAGCTCCTTGCCGCAAAG 61.695 63.158 26.25 3.88 44.23 2.77
6321 6906 1.968540 GAGCTCCTTGCCGCAAAGT 60.969 57.895 7.33 0.00 44.23 2.66
6322 6907 2.192608 GAGCTCCTTGCCGCAAAGTG 62.193 60.000 7.33 3.42 44.23 3.16
6323 6908 2.256461 CTCCTTGCCGCAAAGTGC 59.744 61.111 7.33 0.00 40.69 4.40
6324 6909 2.518112 TCCTTGCCGCAAAGTGCA 60.518 55.556 7.33 0.00 45.36 4.57
6325 6910 1.870055 CTCCTTGCCGCAAAGTGCAT 61.870 55.000 7.33 0.00 45.36 3.96
6326 6911 1.735198 CCTTGCCGCAAAGTGCATG 60.735 57.895 7.33 0.00 45.36 4.06
6327 6912 1.735198 CTTGCCGCAAAGTGCATGG 60.735 57.895 7.33 0.00 45.36 3.66
6328 6913 2.424705 CTTGCCGCAAAGTGCATGGT 62.425 55.000 7.33 0.00 45.36 3.55
6329 6914 2.431260 GCCGCAAAGTGCATGGTG 60.431 61.111 0.61 0.00 45.36 4.17
6330 6915 2.259204 CCGCAAAGTGCATGGTGG 59.741 61.111 0.61 0.00 45.36 4.61
6331 6916 2.563798 CCGCAAAGTGCATGGTGGT 61.564 57.895 0.61 0.00 45.36 4.16
6332 6917 1.372004 CGCAAAGTGCATGGTGGTG 60.372 57.895 0.61 0.00 45.36 4.17
6333 6918 1.005867 GCAAAGTGCATGGTGGTGG 60.006 57.895 0.00 0.00 44.26 4.61
6334 6919 1.005867 CAAAGTGCATGGTGGTGGC 60.006 57.895 0.00 0.00 0.00 5.01
6335 6920 2.209315 AAAGTGCATGGTGGTGGCC 61.209 57.895 0.00 0.00 0.00 5.36
6340 6925 3.716195 CATGGTGGTGGCCGGAGA 61.716 66.667 5.05 0.00 0.00 3.71
6341 6926 2.933287 ATGGTGGTGGCCGGAGAA 60.933 61.111 5.05 0.00 0.00 2.87
6342 6927 2.971598 ATGGTGGTGGCCGGAGAAG 61.972 63.158 5.05 0.00 0.00 2.85
6343 6928 3.319198 GGTGGTGGCCGGAGAAGA 61.319 66.667 5.05 0.00 0.00 2.87
6344 6929 2.747686 GTGGTGGCCGGAGAAGAA 59.252 61.111 5.05 0.00 0.00 2.52
6345 6930 1.376037 GTGGTGGCCGGAGAAGAAG 60.376 63.158 5.05 0.00 0.00 2.85
6346 6931 2.269241 GGTGGCCGGAGAAGAAGG 59.731 66.667 5.05 0.00 0.00 3.46
6347 6932 2.291043 GGTGGCCGGAGAAGAAGGA 61.291 63.158 5.05 0.00 0.00 3.36
6348 6933 1.219393 GTGGCCGGAGAAGAAGGAG 59.781 63.158 5.05 0.00 0.00 3.69
6349 6934 2.188207 GGCCGGAGAAGAAGGAGC 59.812 66.667 5.05 0.00 0.00 4.70
6350 6935 2.188207 GCCGGAGAAGAAGGAGCC 59.812 66.667 5.05 0.00 0.00 4.70
6351 6936 2.496817 CCGGAGAAGAAGGAGCCG 59.503 66.667 0.00 0.00 41.53 5.52
6352 6937 2.352032 CCGGAGAAGAAGGAGCCGT 61.352 63.158 0.00 0.00 40.33 5.68
6353 6938 1.035932 CCGGAGAAGAAGGAGCCGTA 61.036 60.000 0.00 0.00 40.33 4.02
6354 6939 0.382515 CGGAGAAGAAGGAGCCGTAG 59.617 60.000 0.00 0.00 37.35 3.51
6355 6940 1.765230 GGAGAAGAAGGAGCCGTAGA 58.235 55.000 0.00 0.00 0.00 2.59
6356 6941 2.312390 GGAGAAGAAGGAGCCGTAGAT 58.688 52.381 0.00 0.00 0.00 1.98
6357 6942 3.488363 GGAGAAGAAGGAGCCGTAGATA 58.512 50.000 0.00 0.00 0.00 1.98
6358 6943 3.504520 GGAGAAGAAGGAGCCGTAGATAG 59.495 52.174 0.00 0.00 0.00 2.08
6359 6944 3.492337 AGAAGAAGGAGCCGTAGATAGG 58.508 50.000 0.00 0.00 0.00 2.57
6368 6953 2.726832 CCGTAGATAGGCTTGCTACC 57.273 55.000 16.13 4.48 32.81 3.18
6369 6954 1.068472 CCGTAGATAGGCTTGCTACCG 60.068 57.143 16.13 12.39 32.81 4.02
6370 6955 1.607628 CGTAGATAGGCTTGCTACCGT 59.392 52.381 16.13 0.00 32.81 4.83
6371 6956 2.810274 CGTAGATAGGCTTGCTACCGTA 59.190 50.000 16.13 0.00 32.81 4.02
6372 6957 3.251729 CGTAGATAGGCTTGCTACCGTAA 59.748 47.826 16.13 0.00 32.81 3.18
6373 6958 4.261322 CGTAGATAGGCTTGCTACCGTAAA 60.261 45.833 16.13 0.00 32.81 2.01
6374 6959 4.323553 AGATAGGCTTGCTACCGTAAAG 57.676 45.455 0.00 0.00 0.00 1.85
6376 6961 0.252197 AGGCTTGCTACCGTAAAGGG 59.748 55.000 0.00 0.00 46.96 3.95
6377 6962 0.251073 GGCTTGCTACCGTAAAGGGA 59.749 55.000 0.00 0.00 46.96 4.20
6392 6977 3.364277 GGGAGGATCACGCTTACAC 57.636 57.895 0.00 0.00 36.25 2.90
6393 6978 0.179081 GGGAGGATCACGCTTACACC 60.179 60.000 0.00 0.00 36.25 4.16
6394 6979 0.179081 GGAGGATCACGCTTACACCC 60.179 60.000 0.00 0.00 36.25 4.61
6395 6980 0.535335 GAGGATCACGCTTACACCCA 59.465 55.000 0.00 0.00 33.17 4.51
6396 6981 1.139058 GAGGATCACGCTTACACCCAT 59.861 52.381 0.00 0.00 33.17 4.00
6397 6982 1.134401 AGGATCACGCTTACACCCATG 60.134 52.381 0.00 0.00 0.00 3.66
6398 6983 0.657840 GATCACGCTTACACCCATGC 59.342 55.000 0.00 0.00 0.00 4.06
6399 6984 0.253044 ATCACGCTTACACCCATGCT 59.747 50.000 0.00 0.00 0.00 3.79
6400 6985 0.036164 TCACGCTTACACCCATGCTT 59.964 50.000 0.00 0.00 0.00 3.91
6401 6986 0.168788 CACGCTTACACCCATGCTTG 59.831 55.000 0.00 0.00 0.00 4.01
6402 6987 1.137404 CGCTTACACCCATGCTTGC 59.863 57.895 0.00 0.00 0.00 4.01
6403 6988 1.308069 CGCTTACACCCATGCTTGCT 61.308 55.000 0.00 0.00 0.00 3.91
6404 6989 0.171903 GCTTACACCCATGCTTGCTG 59.828 55.000 0.00 0.00 0.00 4.41
6405 6990 0.171903 CTTACACCCATGCTTGCTGC 59.828 55.000 0.00 0.00 43.25 5.25
6419 7004 4.069232 CTGCAAGTCGGCGGAGGA 62.069 66.667 7.21 0.00 42.91 3.71
6420 7005 3.997064 CTGCAAGTCGGCGGAGGAG 62.997 68.421 7.21 1.35 42.91 3.69
6421 7006 4.070552 GCAAGTCGGCGGAGGAGT 62.071 66.667 7.21 0.00 0.00 3.85
6422 7007 2.657237 CAAGTCGGCGGAGGAGTT 59.343 61.111 7.21 0.00 0.00 3.01
6423 7008 1.446272 CAAGTCGGCGGAGGAGTTC 60.446 63.158 7.21 0.00 0.00 3.01
6424 7009 1.606889 AAGTCGGCGGAGGAGTTCT 60.607 57.895 7.21 0.00 0.00 3.01
6425 7010 0.323178 AAGTCGGCGGAGGAGTTCTA 60.323 55.000 7.21 0.00 0.00 2.10
6426 7011 1.031029 AGTCGGCGGAGGAGTTCTAC 61.031 60.000 7.21 0.00 0.00 2.59
6427 7012 1.751927 TCGGCGGAGGAGTTCTACC 60.752 63.158 7.21 0.00 0.00 3.18
6428 7013 2.783288 CGGCGGAGGAGTTCTACCC 61.783 68.421 0.00 0.00 0.00 3.69
6429 7014 2.433146 GGCGGAGGAGTTCTACCCC 61.433 68.421 0.00 0.00 0.00 4.95
6430 7015 2.783288 GCGGAGGAGTTCTACCCCG 61.783 68.421 0.53 0.53 41.02 5.73
6431 7016 1.077212 CGGAGGAGTTCTACCCCGA 60.077 63.158 0.00 0.00 40.77 5.14
6432 7017 1.382692 CGGAGGAGTTCTACCCCGAC 61.383 65.000 0.00 0.00 40.77 4.79
6433 7018 1.042003 GGAGGAGTTCTACCCCGACC 61.042 65.000 0.00 0.00 0.00 4.79
6434 7019 0.033306 GAGGAGTTCTACCCCGACCT 60.033 60.000 0.00 0.00 0.00 3.85
6435 7020 0.412640 AGGAGTTCTACCCCGACCTT 59.587 55.000 0.00 0.00 0.00 3.50
6436 7021 0.535797 GGAGTTCTACCCCGACCTTG 59.464 60.000 0.00 0.00 0.00 3.61
6437 7022 1.553706 GAGTTCTACCCCGACCTTGA 58.446 55.000 0.00 0.00 0.00 3.02
6438 7023 2.108970 GAGTTCTACCCCGACCTTGAT 58.891 52.381 0.00 0.00 0.00 2.57
6439 7024 1.831736 AGTTCTACCCCGACCTTGATG 59.168 52.381 0.00 0.00 0.00 3.07
6440 7025 1.829222 GTTCTACCCCGACCTTGATGA 59.171 52.381 0.00 0.00 0.00 2.92
6441 7026 2.434702 GTTCTACCCCGACCTTGATGAT 59.565 50.000 0.00 0.00 0.00 2.45
6442 7027 2.759355 TCTACCCCGACCTTGATGATT 58.241 47.619 0.00 0.00 0.00 2.57
6443 7028 2.434336 TCTACCCCGACCTTGATGATTG 59.566 50.000 0.00 0.00 0.00 2.67
6444 7029 1.285280 ACCCCGACCTTGATGATTGA 58.715 50.000 0.00 0.00 0.00 2.57
6445 7030 1.210478 ACCCCGACCTTGATGATTGAG 59.790 52.381 0.00 0.00 0.00 3.02
6446 7031 1.210478 CCCCGACCTTGATGATTGAGT 59.790 52.381 0.00 0.00 0.00 3.41
6447 7032 2.555199 CCCGACCTTGATGATTGAGTC 58.445 52.381 0.00 0.00 0.00 3.36
6448 7033 2.196749 CCGACCTTGATGATTGAGTCG 58.803 52.381 3.52 3.52 44.88 4.18
6449 7034 2.196749 CGACCTTGATGATTGAGTCGG 58.803 52.381 0.00 0.00 42.39 4.79
6450 7035 1.936547 GACCTTGATGATTGAGTCGGC 59.063 52.381 0.00 0.00 0.00 5.54
6451 7036 1.303309 CCTTGATGATTGAGTCGGCC 58.697 55.000 0.00 0.00 0.00 6.13
6452 7037 1.134280 CCTTGATGATTGAGTCGGCCT 60.134 52.381 0.00 0.00 0.00 5.19
6453 7038 2.636830 CTTGATGATTGAGTCGGCCTT 58.363 47.619 0.00 0.00 0.00 4.35
6454 7039 2.315925 TGATGATTGAGTCGGCCTTC 57.684 50.000 0.00 0.00 0.00 3.46
6455 7040 1.134401 TGATGATTGAGTCGGCCTTCC 60.134 52.381 0.00 0.00 0.00 3.46
6456 7041 1.139853 GATGATTGAGTCGGCCTTCCT 59.860 52.381 0.00 0.00 0.00 3.36
6457 7042 1.860641 TGATTGAGTCGGCCTTCCTA 58.139 50.000 0.00 0.00 0.00 2.94
6458 7043 1.757118 TGATTGAGTCGGCCTTCCTAG 59.243 52.381 0.00 0.00 0.00 3.02
6459 7044 1.069358 GATTGAGTCGGCCTTCCTAGG 59.931 57.143 0.82 0.82 45.02 3.02
6460 7045 0.252103 TTGAGTCGGCCTTCCTAGGT 60.252 55.000 9.08 0.00 44.00 3.08
6461 7046 0.252103 TGAGTCGGCCTTCCTAGGTT 60.252 55.000 9.08 0.00 44.00 3.50
6462 7047 0.903236 GAGTCGGCCTTCCTAGGTTT 59.097 55.000 9.08 0.00 44.00 3.27
6463 7048 0.903236 AGTCGGCCTTCCTAGGTTTC 59.097 55.000 9.08 0.00 44.00 2.78
6464 7049 0.611714 GTCGGCCTTCCTAGGTTTCA 59.388 55.000 9.08 0.00 44.00 2.69
6465 7050 1.209747 GTCGGCCTTCCTAGGTTTCAT 59.790 52.381 9.08 0.00 44.00 2.57
6466 7051 1.913419 TCGGCCTTCCTAGGTTTCATT 59.087 47.619 9.08 0.00 44.00 2.57
6467 7052 2.017049 CGGCCTTCCTAGGTTTCATTG 58.983 52.381 9.08 0.00 44.00 2.82
6468 7053 2.618045 CGGCCTTCCTAGGTTTCATTGT 60.618 50.000 9.08 0.00 44.00 2.71
6469 7054 3.431415 GGCCTTCCTAGGTTTCATTGTT 58.569 45.455 9.08 0.00 44.00 2.83
6470 7055 3.832490 GGCCTTCCTAGGTTTCATTGTTT 59.168 43.478 9.08 0.00 44.00 2.83
6471 7056 5.014202 GGCCTTCCTAGGTTTCATTGTTTA 58.986 41.667 9.08 0.00 44.00 2.01
6472 7057 5.125578 GGCCTTCCTAGGTTTCATTGTTTAG 59.874 44.000 9.08 0.00 44.00 1.85
6473 7058 5.393135 GCCTTCCTAGGTTTCATTGTTTAGC 60.393 44.000 9.08 0.00 44.00 3.09
6474 7059 5.946377 CCTTCCTAGGTTTCATTGTTTAGCT 59.054 40.000 9.08 0.00 36.74 3.32
6475 7060 7.110155 CCTTCCTAGGTTTCATTGTTTAGCTA 58.890 38.462 9.08 0.00 36.74 3.32
6476 7061 7.775561 CCTTCCTAGGTTTCATTGTTTAGCTAT 59.224 37.037 9.08 0.00 36.74 2.97
6477 7062 8.506168 TTCCTAGGTTTCATTGTTTAGCTATG 57.494 34.615 9.08 0.00 0.00 2.23
6478 7063 7.630082 TCCTAGGTTTCATTGTTTAGCTATGT 58.370 34.615 9.08 0.00 33.18 2.29
6479 7064 8.764558 TCCTAGGTTTCATTGTTTAGCTATGTA 58.235 33.333 9.08 0.00 33.18 2.29
6480 7065 9.561069 CCTAGGTTTCATTGTTTAGCTATGTAT 57.439 33.333 0.00 0.00 33.18 2.29
6492 7077 9.899661 TGTTTAGCTATGTATATGAACTTTGGT 57.100 29.630 0.00 0.00 0.00 3.67
6495 7080 9.899661 TTAGCTATGTATATGAACTTTGGTTGT 57.100 29.630 0.00 0.00 35.58 3.32
6496 7081 8.213518 AGCTATGTATATGAACTTTGGTTGTG 57.786 34.615 0.00 0.00 35.58 3.33
6497 7082 7.829211 AGCTATGTATATGAACTTTGGTTGTGT 59.171 33.333 0.00 0.00 35.58 3.72
6498 7083 8.458843 GCTATGTATATGAACTTTGGTTGTGTT 58.541 33.333 0.00 0.00 35.58 3.32
6499 7084 9.773328 CTATGTATATGAACTTTGGTTGTGTTG 57.227 33.333 0.00 0.00 35.58 3.33
6500 7085 7.575414 TGTATATGAACTTTGGTTGTGTTGT 57.425 32.000 0.00 0.00 35.58 3.32
6501 7086 7.421599 TGTATATGAACTTTGGTTGTGTTGTG 58.578 34.615 0.00 0.00 35.58 3.33
6502 7087 6.707440 ATATGAACTTTGGTTGTGTTGTGA 57.293 33.333 0.00 0.00 35.58 3.58
6503 7088 4.855715 TGAACTTTGGTTGTGTTGTGAA 57.144 36.364 0.00 0.00 35.58 3.18
6504 7089 4.551388 TGAACTTTGGTTGTGTTGTGAAC 58.449 39.130 0.00 0.00 35.58 3.18
6505 7090 4.279671 TGAACTTTGGTTGTGTTGTGAACT 59.720 37.500 0.00 0.00 35.58 3.01
6506 7091 4.864704 ACTTTGGTTGTGTTGTGAACTT 57.135 36.364 0.00 0.00 0.00 2.66
6507 7092 5.208463 ACTTTGGTTGTGTTGTGAACTTT 57.792 34.783 0.00 0.00 0.00 2.66
6508 7093 4.987912 ACTTTGGTTGTGTTGTGAACTTTG 59.012 37.500 0.00 0.00 0.00 2.77
6509 7094 4.592485 TTGGTTGTGTTGTGAACTTTGT 57.408 36.364 0.00 0.00 0.00 2.83
6510 7095 5.707242 TTGGTTGTGTTGTGAACTTTGTA 57.293 34.783 0.00 0.00 0.00 2.41
6511 7096 5.303747 TGGTTGTGTTGTGAACTTTGTAG 57.696 39.130 0.00 0.00 0.00 2.74
6512 7097 4.102649 GGTTGTGTTGTGAACTTTGTAGC 58.897 43.478 0.00 0.00 0.00 3.58
6513 7098 3.666883 TGTGTTGTGAACTTTGTAGCG 57.333 42.857 0.00 0.00 0.00 4.26
6514 7099 2.223157 TGTGTTGTGAACTTTGTAGCGC 60.223 45.455 0.00 0.00 0.00 5.92
6515 7100 1.004398 TGTTGTGAACTTTGTAGCGCG 60.004 47.619 0.00 0.00 0.00 6.86
6516 7101 1.259507 GTTGTGAACTTTGTAGCGCGA 59.740 47.619 12.10 0.00 0.00 5.87
6517 7102 1.573026 TGTGAACTTTGTAGCGCGAA 58.427 45.000 12.10 0.00 0.00 4.70
6518 7103 2.139917 TGTGAACTTTGTAGCGCGAAT 58.860 42.857 12.10 0.00 0.00 3.34
6519 7104 2.546368 TGTGAACTTTGTAGCGCGAATT 59.454 40.909 12.10 0.00 0.00 2.17
6520 7105 2.902484 GTGAACTTTGTAGCGCGAATTG 59.098 45.455 12.10 0.00 0.00 2.32
6521 7106 2.095969 TGAACTTTGTAGCGCGAATTGG 60.096 45.455 12.10 0.00 0.00 3.16
6522 7107 1.519408 ACTTTGTAGCGCGAATTGGT 58.481 45.000 12.10 0.00 0.00 3.67
6523 7108 1.877443 ACTTTGTAGCGCGAATTGGTT 59.123 42.857 12.10 0.00 0.00 3.67
6524 7109 2.292292 ACTTTGTAGCGCGAATTGGTTT 59.708 40.909 12.10 0.00 0.00 3.27
6525 7110 3.243267 ACTTTGTAGCGCGAATTGGTTTT 60.243 39.130 12.10 0.00 0.00 2.43
6526 7111 3.357166 TTGTAGCGCGAATTGGTTTTT 57.643 38.095 12.10 0.00 0.00 1.94
6553 7138 8.877864 AAATTTACAGAATGAACTATGGTGGA 57.122 30.769 0.00 0.00 39.69 4.02
6554 7139 9.479549 AAATTTACAGAATGAACTATGGTGGAT 57.520 29.630 0.00 0.00 39.69 3.41
6555 7140 9.479549 AATTTACAGAATGAACTATGGTGGATT 57.520 29.630 0.00 0.00 39.69 3.01
6557 7142 9.613428 TTTACAGAATGAACTATGGTGGATTAG 57.387 33.333 0.00 0.00 39.69 1.73
6558 7143 7.200434 ACAGAATGAACTATGGTGGATTAGT 57.800 36.000 0.00 0.00 39.69 2.24
6559 7144 7.633789 ACAGAATGAACTATGGTGGATTAGTT 58.366 34.615 0.00 0.00 40.44 2.24
6564 7149 5.700402 AACTATGGTGGATTAGTTCAGCT 57.300 39.130 0.00 0.00 34.38 4.24
6565 7150 5.028549 ACTATGGTGGATTAGTTCAGCTG 57.971 43.478 7.63 7.63 33.13 4.24
6566 7151 2.787473 TGGTGGATTAGTTCAGCTGG 57.213 50.000 15.13 0.00 33.13 4.85
6567 7152 1.281867 TGGTGGATTAGTTCAGCTGGG 59.718 52.381 15.13 0.00 33.13 4.45
6568 7153 1.559682 GGTGGATTAGTTCAGCTGGGA 59.440 52.381 15.13 0.00 0.00 4.37
6569 7154 2.633488 GTGGATTAGTTCAGCTGGGAC 58.367 52.381 15.13 13.08 0.00 4.46
6570 7155 1.559682 TGGATTAGTTCAGCTGGGACC 59.440 52.381 15.13 8.65 0.00 4.46
6571 7156 1.840635 GGATTAGTTCAGCTGGGACCT 59.159 52.381 15.13 7.19 0.00 3.85
6572 7157 2.239907 GGATTAGTTCAGCTGGGACCTT 59.760 50.000 15.13 1.44 0.00 3.50
6573 7158 3.454812 GGATTAGTTCAGCTGGGACCTTA 59.545 47.826 15.13 0.51 0.00 2.69
6574 7159 4.080526 GGATTAGTTCAGCTGGGACCTTAA 60.081 45.833 15.13 9.05 0.00 1.85
6575 7160 4.986054 TTAGTTCAGCTGGGACCTTAAA 57.014 40.909 15.13 0.00 0.00 1.52
6576 7161 3.425162 AGTTCAGCTGGGACCTTAAAG 57.575 47.619 15.13 0.00 0.00 1.85
6577 7162 2.711547 AGTTCAGCTGGGACCTTAAAGT 59.288 45.455 15.13 0.00 0.00 2.66
6578 7163 3.138468 AGTTCAGCTGGGACCTTAAAGTT 59.862 43.478 15.13 0.00 0.00 2.66
6579 7164 3.418684 TCAGCTGGGACCTTAAAGTTC 57.581 47.619 15.13 0.00 0.00 3.01
6580 7165 2.039879 TCAGCTGGGACCTTAAAGTTCC 59.960 50.000 15.13 0.00 35.75 3.62
6581 7166 1.354705 AGCTGGGACCTTAAAGTTCCC 59.645 52.381 7.82 7.82 34.02 3.97
6582 7167 1.949079 GCTGGGACCTTAAAGTTCCCG 60.949 57.143 9.85 6.41 43.33 5.14
6583 7168 0.037160 TGGGACCTTAAAGTTCCCGC 59.963 55.000 9.85 0.00 43.33 6.13
6584 7169 0.037160 GGGACCTTAAAGTTCCCGCA 59.963 55.000 0.00 0.00 27.67 5.69
6585 7170 1.546099 GGGACCTTAAAGTTCCCGCAA 60.546 52.381 0.00 0.00 27.67 4.85
6586 7171 2.232399 GGACCTTAAAGTTCCCGCAAA 58.768 47.619 0.00 0.00 0.00 3.68
6587 7172 2.624364 GGACCTTAAAGTTCCCGCAAAA 59.376 45.455 0.00 0.00 0.00 2.44
6588 7173 3.068448 GGACCTTAAAGTTCCCGCAAAAA 59.932 43.478 0.00 0.00 0.00 1.94
6589 7174 4.262292 GGACCTTAAAGTTCCCGCAAAAAT 60.262 41.667 0.00 0.00 0.00 1.82
6590 7175 4.878439 ACCTTAAAGTTCCCGCAAAAATC 58.122 39.130 0.00 0.00 0.00 2.17
6591 7176 3.917985 CCTTAAAGTTCCCGCAAAAATCG 59.082 43.478 0.00 0.00 0.00 3.34
6592 7177 4.542735 CTTAAAGTTCCCGCAAAAATCGT 58.457 39.130 0.00 0.00 0.00 3.73
6593 7178 3.446310 AAAGTTCCCGCAAAAATCGTT 57.554 38.095 0.00 0.00 0.00 3.85
6594 7179 3.446310 AAGTTCCCGCAAAAATCGTTT 57.554 38.095 0.00 0.00 0.00 3.60
6595 7180 3.007979 AGTTCCCGCAAAAATCGTTTC 57.992 42.857 0.00 0.00 0.00 2.78
6596 7181 2.359531 AGTTCCCGCAAAAATCGTTTCA 59.640 40.909 0.00 0.00 0.00 2.69
6597 7182 2.697431 TCCCGCAAAAATCGTTTCAG 57.303 45.000 0.00 0.00 0.00 3.02
6598 7183 1.268352 TCCCGCAAAAATCGTTTCAGG 59.732 47.619 0.00 0.00 0.00 3.86
6599 7184 1.668628 CCCGCAAAAATCGTTTCAGGG 60.669 52.381 0.00 0.00 32.11 4.45
6600 7185 1.668628 CCGCAAAAATCGTTTCAGGGG 60.669 52.381 0.00 0.00 32.34 4.79
6601 7186 1.668628 CGCAAAAATCGTTTCAGGGGG 60.669 52.381 0.00 0.00 0.00 5.40
6602 7187 1.616374 GCAAAAATCGTTTCAGGGGGA 59.384 47.619 0.00 0.00 0.00 4.81
6603 7188 2.609491 GCAAAAATCGTTTCAGGGGGAC 60.609 50.000 0.00 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.713883 GCGGCGGATATACATGTTCG 59.286 55.000 9.78 2.41 0.00 3.95
30 31 4.354155 GCACTTGCGGCGGATATA 57.646 55.556 9.78 0.00 0.00 0.86
51 52 4.162690 ATCGCGGTGAGGGAAGCC 62.163 66.667 6.13 0.00 45.20 4.35
115 116 5.810074 GCGATGGTAATTTTATTGGCAGTTT 59.190 36.000 0.00 0.00 0.00 2.66
129 130 4.955811 TTGTAGAGATGGCGATGGTAAT 57.044 40.909 0.00 0.00 0.00 1.89
132 133 3.845781 ATTTGTAGAGATGGCGATGGT 57.154 42.857 0.00 0.00 0.00 3.55
135 136 4.281941 TCAGCTATTTGTAGAGATGGCGAT 59.718 41.667 0.00 0.00 35.24 4.58
137 138 3.982475 TCAGCTATTTGTAGAGATGGCG 58.018 45.455 0.00 0.00 35.24 5.69
181 182 0.604073 CATGTTGATGCAGCAACCCA 59.396 50.000 36.85 24.22 45.75 4.51
183 184 0.889994 TCCATGTTGATGCAGCAACC 59.110 50.000 36.85 22.88 45.75 3.77
207 208 1.375523 ATCACCGACGGGCTTTCAC 60.376 57.895 20.00 0.00 36.48 3.18
229 230 2.604686 ACGAGCTCTGAGGCCCAA 60.605 61.111 12.85 0.00 0.00 4.12
238 239 0.605589 CCAGTTCAAGGACGAGCTCT 59.394 55.000 12.85 0.00 0.00 4.09
249 250 4.019321 AGGCAAACTATAGCTCCAGTTCAA 60.019 41.667 12.00 0.00 33.92 2.69
252 253 4.263506 ACAAGGCAAACTATAGCTCCAGTT 60.264 41.667 6.98 6.98 36.56 3.16
262 263 4.917906 AGGAAGAGACAAGGCAAACTAT 57.082 40.909 0.00 0.00 0.00 2.12
337 338 6.018433 AGGTATATTTCAAAGCCCTCATGT 57.982 37.500 0.00 0.00 0.00 3.21
357 358 0.332972 GGAAGGCAATCCAGGAAGGT 59.667 55.000 0.00 0.00 39.42 3.50
363 364 0.807667 CTCGTCGGAAGGCAATCCAG 60.808 60.000 9.62 3.40 39.61 3.86
423 424 5.164620 TGGAGCTTTTCTCACATGACATA 57.835 39.130 0.00 0.00 43.70 2.29
435 436 5.125100 TGTTCACATTGATGGAGCTTTTC 57.875 39.130 0.00 0.00 0.00 2.29
473 474 5.921360 ATTGATATCAACCACGGAGCCCG 62.921 52.174 20.19 11.48 45.20 6.13
503 504 2.625314 GTCCTGGTCGATGATGAGATGA 59.375 50.000 0.00 0.00 0.00 2.92
523 524 0.461548 ATGTCACGATGCATCTCGGT 59.538 50.000 23.73 12.07 42.88 4.69
526 527 1.845266 ACGATGTCACGATGCATCTC 58.155 50.000 23.73 12.42 39.30 2.75
568 569 3.769739 ATGTGGAGCGCCAGATTTATA 57.230 42.857 13.60 0.00 45.21 0.98
571 572 2.645838 ATATGTGGAGCGCCAGATTT 57.354 45.000 23.77 13.71 45.21 2.17
620 621 9.282569 CGGGGAGTATTATATACTAGTATCACC 57.717 40.741 18.68 12.07 0.00 4.02
621 622 9.844257 ACGGGGAGTATTATATACTAGTATCAC 57.156 37.037 18.68 10.07 0.00 3.06
628 629 9.243105 GGTTGTAACGGGGAGTATTATATACTA 57.757 37.037 0.00 0.00 0.00 1.82
629 630 7.729881 TGGTTGTAACGGGGAGTATTATATACT 59.270 37.037 0.00 0.00 0.00 2.12
630 631 7.895759 TGGTTGTAACGGGGAGTATTATATAC 58.104 38.462 0.00 0.00 0.00 1.47
631 632 7.729881 ACTGGTTGTAACGGGGAGTATTATATA 59.270 37.037 0.00 0.00 0.00 0.86
632 633 6.556116 ACTGGTTGTAACGGGGAGTATTATAT 59.444 38.462 0.00 0.00 0.00 0.86
633 634 5.898972 ACTGGTTGTAACGGGGAGTATTATA 59.101 40.000 0.00 0.00 0.00 0.98
634 635 4.718276 ACTGGTTGTAACGGGGAGTATTAT 59.282 41.667 0.00 0.00 0.00 1.28
635 636 4.095946 ACTGGTTGTAACGGGGAGTATTA 58.904 43.478 0.00 0.00 0.00 0.98
636 637 2.908351 ACTGGTTGTAACGGGGAGTATT 59.092 45.455 0.00 0.00 0.00 1.89
637 638 2.498885 GACTGGTTGTAACGGGGAGTAT 59.501 50.000 0.00 0.00 0.00 2.12
638 639 1.895131 GACTGGTTGTAACGGGGAGTA 59.105 52.381 0.00 0.00 0.00 2.59
639 640 0.683412 GACTGGTTGTAACGGGGAGT 59.317 55.000 0.00 0.00 0.00 3.85
640 641 0.036671 GGACTGGTTGTAACGGGGAG 60.037 60.000 0.00 0.00 0.00 4.30
641 642 1.818959 CGGACTGGTTGTAACGGGGA 61.819 60.000 0.00 0.00 0.00 4.81
642 643 1.375013 CGGACTGGTTGTAACGGGG 60.375 63.158 0.00 0.00 0.00 5.73
643 644 0.389426 CTCGGACTGGTTGTAACGGG 60.389 60.000 0.00 0.00 32.37 5.28
644 645 0.389426 CCTCGGACTGGTTGTAACGG 60.389 60.000 0.00 0.00 32.37 4.44
645 646 0.599558 TCCTCGGACTGGTTGTAACG 59.400 55.000 0.00 0.00 0.00 3.18
646 647 2.825861 TTCCTCGGACTGGTTGTAAC 57.174 50.000 0.00 0.00 0.00 2.50
647 648 2.967201 TCTTTCCTCGGACTGGTTGTAA 59.033 45.455 0.00 0.00 0.00 2.41
648 649 2.298163 GTCTTTCCTCGGACTGGTTGTA 59.702 50.000 0.00 0.00 0.00 2.41
649 650 1.070289 GTCTTTCCTCGGACTGGTTGT 59.930 52.381 0.00 0.00 0.00 3.32
650 651 1.070134 TGTCTTTCCTCGGACTGGTTG 59.930 52.381 0.00 0.00 34.01 3.77
651 652 1.420430 TGTCTTTCCTCGGACTGGTT 58.580 50.000 0.00 0.00 34.01 3.67
652 653 1.070289 GTTGTCTTTCCTCGGACTGGT 59.930 52.381 0.00 0.00 34.01 4.00
653 654 1.608283 GGTTGTCTTTCCTCGGACTGG 60.608 57.143 0.00 0.00 34.01 4.00
654 655 1.608283 GGGTTGTCTTTCCTCGGACTG 60.608 57.143 0.00 0.00 34.01 3.51
655 656 0.685660 GGGTTGTCTTTCCTCGGACT 59.314 55.000 0.00 0.00 34.01 3.85
656 657 0.395312 TGGGTTGTCTTTCCTCGGAC 59.605 55.000 0.00 0.00 0.00 4.79
657 658 1.003118 CATGGGTTGTCTTTCCTCGGA 59.997 52.381 0.00 0.00 0.00 4.55
658 659 1.271379 ACATGGGTTGTCTTTCCTCGG 60.271 52.381 0.00 0.00 30.89 4.63
659 660 2.185004 ACATGGGTTGTCTTTCCTCG 57.815 50.000 0.00 0.00 30.89 4.63
671 672 2.976099 GCCTAAGCCAAACATGGGT 58.024 52.632 0.00 0.00 42.13 4.51
697 698 1.133598 CGTCAGTGTAAGTGGCCGATA 59.866 52.381 0.00 0.00 39.14 2.92
699 700 1.287815 CGTCAGTGTAAGTGGCCGA 59.712 57.895 0.00 0.00 39.14 5.54
700 701 0.241749 TACGTCAGTGTAAGTGGCCG 59.758 55.000 0.00 0.00 39.14 6.13
702 703 1.334054 CGTACGTCAGTGTAAGTGGC 58.666 55.000 7.22 0.00 38.88 5.01
704 705 1.973138 CCCGTACGTCAGTGTAAGTG 58.027 55.000 15.21 0.00 39.10 3.16
705 706 0.242017 GCCCGTACGTCAGTGTAAGT 59.758 55.000 15.21 0.00 0.00 2.24
706 707 0.457337 GGCCCGTACGTCAGTGTAAG 60.457 60.000 15.21 0.00 0.00 2.34
707 708 1.177895 TGGCCCGTACGTCAGTGTAA 61.178 55.000 15.21 0.00 0.00 2.41
708 709 1.603171 TGGCCCGTACGTCAGTGTA 60.603 57.895 15.21 0.00 0.00 2.90
737 738 4.258543 GTGATCCATACGTTCCCTGAAAA 58.741 43.478 0.00 0.00 0.00 2.29
1056 1057 2.180674 GGAAGGTTCCGTTGATGCC 58.819 57.895 0.00 0.00 37.65 4.40
1095 1096 2.364842 GAGGAGGAGGAGGCTGCA 60.365 66.667 9.23 0.00 0.00 4.41
1209 1210 1.474330 TGAGCTCGTCAGGCTGAATA 58.526 50.000 20.62 9.32 40.40 1.75
1218 1219 3.684990 AGCCGCTTGAGCTCGTCA 61.685 61.111 9.64 0.00 34.91 4.35
1284 1285 2.572812 GCAATGTGCATTCGGCCA 59.427 55.556 2.24 0.00 44.26 5.36
1391 1392 3.142174 CCAAGAACTCTTCCTGACAACC 58.858 50.000 0.00 0.00 33.11 3.77
1395 1396 3.556004 CCTGTCCAAGAACTCTTCCTGAC 60.556 52.174 0.00 0.00 33.11 3.51
1396 1397 2.634940 CCTGTCCAAGAACTCTTCCTGA 59.365 50.000 0.00 0.00 33.11 3.86
1421 1422 5.779806 AACGATGTTAGTTGAAATCCGAG 57.220 39.130 0.00 0.00 0.00 4.63
1466 1467 5.046304 AGGTAACAGCACACTTGATAGTCAT 60.046 40.000 0.00 0.00 41.41 3.06
1467 1468 4.283467 AGGTAACAGCACACTTGATAGTCA 59.717 41.667 0.00 0.00 41.41 3.41
1911 1912 7.397192 TCCTTATTTTCAGGAGCTTTTATTGCT 59.603 33.333 0.00 0.00 44.24 3.91
1956 1957 0.032678 CTACTGGCGCTCCCATACAG 59.967 60.000 7.64 6.70 44.33 2.74
1962 1963 2.125106 CAACCTACTGGCGCTCCC 60.125 66.667 7.64 0.00 36.63 4.30
2005 2006 1.819288 TCTAGTTTGACAGAGCCGGAG 59.181 52.381 5.05 0.00 0.00 4.63
2009 2010 7.064016 CACTAATCTTTCTAGTTTGACAGAGCC 59.936 40.741 0.00 0.00 0.00 4.70
2650 2660 6.928492 GTGAAGTAAGGAAAAATGAAATGGCA 59.072 34.615 0.00 0.00 0.00 4.92
2653 2663 8.143835 ACCTGTGAAGTAAGGAAAAATGAAATG 58.856 33.333 0.00 0.00 37.01 2.32
2656 2666 6.605594 ACACCTGTGAAGTAAGGAAAAATGAA 59.394 34.615 3.94 0.00 37.01 2.57
2799 2819 8.077386 TGGTTAAACTAAAATTTTACAGAGCGG 58.923 33.333 6.54 0.00 0.00 5.52
2856 2876 9.712305 CCCTACAATATCGAGTGAAATAGAAAT 57.288 33.333 0.00 0.00 0.00 2.17
2860 2880 6.868864 CCACCCTACAATATCGAGTGAAATAG 59.131 42.308 0.00 0.00 0.00 1.73
3268 3292 5.784177 TCTTCCATAAAGATAGCCGATGTC 58.216 41.667 0.00 0.00 39.12 3.06
3361 3389 4.361783 TCTCTGGATGAGGTTGTATGGAA 58.638 43.478 0.00 0.00 42.86 3.53
3409 3450 5.030147 CCATACCCTACAATATCCTAGCCA 58.970 45.833 0.00 0.00 0.00 4.75
3440 3485 3.068560 GCTTCATTTTCTTGCATGGCAA 58.931 40.909 3.40 3.40 46.80 4.52
3470 3515 5.049828 GCCAAACCTAACATCCAAATATGC 58.950 41.667 0.00 0.00 0.00 3.14
3504 3549 8.723311 GTCTACGCATATCAAGAGTAGAAGTAT 58.277 37.037 8.06 0.00 45.47 2.12
3510 3556 6.673106 ACATGTCTACGCATATCAAGAGTAG 58.327 40.000 0.00 0.00 39.68 2.57
3524 3570 9.988350 AAAAATGCTAGAAATAACATGTCTACG 57.012 29.630 0.00 0.00 0.00 3.51
3567 3618 0.105593 ACACAGTGCAGACCAGACTG 59.894 55.000 0.00 0.00 42.39 3.51
3608 3665 6.618287 ACAAGATCAATTGAACGACAAAGA 57.382 33.333 13.09 0.00 42.03 2.52
3609 3666 7.796838 TCTACAAGATCAATTGAACGACAAAG 58.203 34.615 13.09 6.94 42.03 2.77
3610 3667 7.722795 TCTACAAGATCAATTGAACGACAAA 57.277 32.000 13.09 0.00 42.03 2.83
3611 3668 7.148423 CCATCTACAAGATCAATTGAACGACAA 60.148 37.037 13.09 0.00 36.47 3.18
3612 3669 6.313658 CCATCTACAAGATCAATTGAACGACA 59.686 38.462 13.09 0.00 31.32 4.35
3613 3670 6.709643 CCATCTACAAGATCAATTGAACGAC 58.290 40.000 13.09 4.89 31.32 4.34
3663 3731 6.932356 TTGCTCTATAAATTCCAGCTTGAG 57.068 37.500 0.00 0.00 0.00 3.02
3718 3786 5.546621 TGGTTAGGGTACAATATCAGCTC 57.453 43.478 0.00 0.00 0.00 4.09
4013 4190 6.686630 CAAGCATGGTTATAACTCCAAACAA 58.313 36.000 10.31 0.00 37.27 2.83
4070 4248 3.103738 CGCTTCATAATCAGCAACAAGC 58.896 45.455 0.00 0.00 46.19 4.01
4302 4482 9.723601 AGGCATTACAAATTCACAATACAATTT 57.276 25.926 0.00 0.00 33.37 1.82
4403 4589 7.254795 CCTCCACAATAAAAGTAATCCATCGAC 60.255 40.741 0.00 0.00 0.00 4.20
4517 4854 7.792032 AGAACGTCTTATATTTTCAGATGGGA 58.208 34.615 0.00 0.00 0.00 4.37
4532 4869 8.203937 TCAAATTGAACTGAAAGAACGTCTTA 57.796 30.769 0.00 0.00 35.27 2.10
4652 4989 1.670811 CACGAACAGGCTGAAAAGTGT 59.329 47.619 23.66 7.56 0.00 3.55
4849 5187 4.633126 GCTGTTATCATTCACTTCAGAGCA 59.367 41.667 0.00 0.00 0.00 4.26
4905 5243 9.285359 AGAATCGGGGGAAATTTATCTAGATAT 57.715 33.333 13.22 0.00 0.00 1.63
4911 5249 5.104109 TGTCAGAATCGGGGGAAATTTATCT 60.104 40.000 0.00 0.00 0.00 1.98
5249 5587 7.959152 TGAGTAATATATTCAGGTGGGGACATA 59.041 37.037 0.00 0.00 46.14 2.29
5250 5588 6.792473 TGAGTAATATATTCAGGTGGGGACAT 59.208 38.462 0.00 0.00 46.14 3.06
5251 5589 6.147473 TGAGTAATATATTCAGGTGGGGACA 58.853 40.000 0.00 0.00 38.70 4.02
5252 5590 6.681729 TGAGTAATATATTCAGGTGGGGAC 57.318 41.667 0.00 0.00 0.00 4.46
5253 5591 7.691791 GCTTTGAGTAATATATTCAGGTGGGGA 60.692 40.741 0.00 0.00 0.00 4.81
5254 5592 6.431234 GCTTTGAGTAATATATTCAGGTGGGG 59.569 42.308 0.00 0.00 0.00 4.96
5255 5593 6.998074 TGCTTTGAGTAATATATTCAGGTGGG 59.002 38.462 0.00 0.00 0.00 4.61
5256 5594 7.308229 GCTGCTTTGAGTAATATATTCAGGTGG 60.308 40.741 0.00 0.00 0.00 4.61
5257 5595 7.570140 CGCTGCTTTGAGTAATATATTCAGGTG 60.570 40.741 0.00 0.00 0.00 4.00
5258 5596 6.425114 CGCTGCTTTGAGTAATATATTCAGGT 59.575 38.462 0.00 0.00 0.00 4.00
5259 5597 6.128445 CCGCTGCTTTGAGTAATATATTCAGG 60.128 42.308 0.00 0.00 0.00 3.86
5260 5598 6.646653 TCCGCTGCTTTGAGTAATATATTCAG 59.353 38.462 0.00 2.12 0.00 3.02
5261 5599 6.521162 TCCGCTGCTTTGAGTAATATATTCA 58.479 36.000 0.00 0.00 0.00 2.57
5262 5600 7.042051 TGTTCCGCTGCTTTGAGTAATATATTC 60.042 37.037 0.00 0.00 0.00 1.75
5263 5601 6.765989 TGTTCCGCTGCTTTGAGTAATATATT 59.234 34.615 2.97 2.97 0.00 1.28
5264 5602 6.288294 TGTTCCGCTGCTTTGAGTAATATAT 58.712 36.000 0.00 0.00 0.00 0.86
5265 5603 5.666462 TGTTCCGCTGCTTTGAGTAATATA 58.334 37.500 0.00 0.00 0.00 0.86
5266 5604 4.513442 TGTTCCGCTGCTTTGAGTAATAT 58.487 39.130 0.00 0.00 0.00 1.28
5267 5605 3.932822 TGTTCCGCTGCTTTGAGTAATA 58.067 40.909 0.00 0.00 0.00 0.98
5268 5606 2.778299 TGTTCCGCTGCTTTGAGTAAT 58.222 42.857 0.00 0.00 0.00 1.89
5269 5607 2.248280 TGTTCCGCTGCTTTGAGTAA 57.752 45.000 0.00 0.00 0.00 2.24
5270 5608 2.248280 TTGTTCCGCTGCTTTGAGTA 57.752 45.000 0.00 0.00 0.00 2.59
5271 5609 1.065551 GTTTGTTCCGCTGCTTTGAGT 59.934 47.619 0.00 0.00 0.00 3.41
5272 5610 1.600413 GGTTTGTTCCGCTGCTTTGAG 60.600 52.381 0.00 0.00 0.00 3.02
5273 5611 0.383949 GGTTTGTTCCGCTGCTTTGA 59.616 50.000 0.00 0.00 0.00 2.69
5274 5612 0.934436 CGGTTTGTTCCGCTGCTTTG 60.934 55.000 0.00 0.00 43.96 2.77
5292 5719 9.329913 GCCTATGTAATTCTTATAACAATTGCG 57.670 33.333 5.05 0.00 29.82 4.85
5303 5730 6.311935 GTGTCAACGTGCCTATGTAATTCTTA 59.688 38.462 0.00 0.00 0.00 2.10
5309 5736 3.388345 TGTGTCAACGTGCCTATGTAA 57.612 42.857 0.00 0.00 0.00 2.41
5329 5756 1.625818 AGCGTTCTTTCCTGTCCTCAT 59.374 47.619 0.00 0.00 0.00 2.90
5349 5776 6.018425 GGATATAGTGAAGACGTGTTCTCGTA 60.018 42.308 23.92 17.89 44.21 3.43
5367 5794 6.189677 TGGTCAAAAAGCAAACGGATATAG 57.810 37.500 0.00 0.00 30.91 1.31
5388 5816 7.702386 TGAATAAAATATCACCGACAACATGG 58.298 34.615 0.00 0.00 0.00 3.66
5436 5864 4.925068 AGTCAAACTGAACAAATGCACTC 58.075 39.130 0.00 0.00 0.00 3.51
5465 5893 7.475771 TGATTAAATTCCTTGCAAAACACAC 57.524 32.000 0.00 0.00 0.00 3.82
5478 5906 9.922305 CGTGAGAAAGAGTATTGATTAAATTCC 57.078 33.333 0.00 0.00 0.00 3.01
5479 5907 9.922305 CCGTGAGAAAGAGTATTGATTAAATTC 57.078 33.333 0.00 0.00 0.00 2.17
5480 5908 9.449719 ACCGTGAGAAAGAGTATTGATTAAATT 57.550 29.630 0.00 0.00 0.00 1.82
5482 5910 9.932207 TTACCGTGAGAAAGAGTATTGATTAAA 57.068 29.630 0.00 0.00 0.00 1.52
5484 5912 9.745880 GATTACCGTGAGAAAGAGTATTGATTA 57.254 33.333 0.00 0.00 0.00 1.75
5485 5913 8.258007 TGATTACCGTGAGAAAGAGTATTGATT 58.742 33.333 0.00 0.00 0.00 2.57
5486 5914 7.782049 TGATTACCGTGAGAAAGAGTATTGAT 58.218 34.615 0.00 0.00 0.00 2.57
5487 5915 7.165460 TGATTACCGTGAGAAAGAGTATTGA 57.835 36.000 0.00 0.00 0.00 2.57
5490 5918 8.915036 AGTATTGATTACCGTGAGAAAGAGTAT 58.085 33.333 0.00 0.00 0.00 2.12
5492 5920 7.171630 AGTATTGATTACCGTGAGAAAGAGT 57.828 36.000 0.00 0.00 0.00 3.24
5528 5956 5.571285 ACTCGCAGATATATCTAGAACCCA 58.429 41.667 14.92 0.00 34.85 4.51
5530 5958 7.852971 AGTACTCGCAGATATATCTAGAACC 57.147 40.000 14.92 8.11 34.85 3.62
5547 5975 6.967199 GGATTAAATTCCTTGCAAAGTACTCG 59.033 38.462 0.00 0.00 44.25 4.18
5684 6224 1.981256 AATTGTGCCCACGAAACTCT 58.019 45.000 0.00 0.00 0.00 3.24
5692 6232 1.673168 TTGCCAAAAATTGTGCCCAC 58.327 45.000 0.00 0.00 0.00 4.61
5839 6379 7.030768 GCCTGATTTAATGCGTTTACCTTAAA 58.969 34.615 0.00 0.00 0.00 1.52
5879 6419 3.263425 ACCCTATTGAACGGACTGACAAT 59.737 43.478 12.91 12.91 36.94 2.71
5880 6420 2.635915 ACCCTATTGAACGGACTGACAA 59.364 45.455 0.00 0.00 0.00 3.18
6000 6564 1.601903 GAGCAACCAAACGATGTGACA 59.398 47.619 0.00 0.00 0.00 3.58
6101 6684 0.517316 GGCTTGGACTGCGTGTAAAG 59.483 55.000 0.00 0.00 0.00 1.85
6105 6688 2.281070 CAGGCTTGGACTGCGTGT 60.281 61.111 0.00 0.00 40.21 4.49
6110 6693 4.335647 ACGGGCAGGCTTGGACTG 62.336 66.667 0.00 0.00 42.51 3.51
6111 6694 4.021925 GACGGGCAGGCTTGGACT 62.022 66.667 0.00 0.00 0.00 3.85
6112 6695 4.329545 TGACGGGCAGGCTTGGAC 62.330 66.667 0.00 0.00 0.00 4.02
6113 6696 4.020617 CTGACGGGCAGGCTTGGA 62.021 66.667 1.89 0.00 41.07 3.53
6127 6710 4.464951 CCCCAACCACGTATATATAGCTGA 59.535 45.833 0.00 0.00 0.00 4.26
6128 6711 4.382685 CCCCCAACCACGTATATATAGCTG 60.383 50.000 0.00 0.00 0.00 4.24
6137 6720 0.113580 AAAAGCCCCCAACCACGTAT 59.886 50.000 0.00 0.00 0.00 3.06
6142 6725 1.132689 ACCATAAAAAGCCCCCAACCA 60.133 47.619 0.00 0.00 0.00 3.67
6171 6754 1.596477 CTGCGGCAGAGCTTATCCC 60.596 63.158 25.33 0.00 38.13 3.85
6199 6782 3.929610 CCAAAGAAAGCTAAGGAGACGAG 59.070 47.826 0.00 0.00 0.00 4.18
6210 6795 6.348540 CGACTAATTGCTTACCAAAGAAAGCT 60.349 38.462 8.36 0.00 46.57 3.74
6211 6796 5.795441 CGACTAATTGCTTACCAAAGAAAGC 59.205 40.000 0.22 0.22 46.60 3.51
6223 6808 3.326747 AGAAACGAGCGACTAATTGCTT 58.673 40.909 0.00 0.00 46.36 3.91
6265 6850 4.643387 GGCGAACACCACCAGCCT 62.643 66.667 0.00 0.00 44.06 4.58
6294 6879 4.537433 AAGGAGCTCCGCATCCGC 62.537 66.667 26.95 0.25 40.73 5.54
6295 6880 2.587194 CAAGGAGCTCCGCATCCG 60.587 66.667 26.95 9.17 40.73 4.18
6296 6881 2.899339 GCAAGGAGCTCCGCATCC 60.899 66.667 26.95 11.15 42.08 3.51
6297 6882 2.899339 GGCAAGGAGCTCCGCATC 60.899 66.667 27.39 18.02 44.79 3.91
6298 6883 4.845580 CGGCAAGGAGCTCCGCAT 62.846 66.667 27.39 16.65 44.79 4.73
6302 6887 2.672996 TTTGCGGCAAGGAGCTCC 60.673 61.111 26.22 26.22 44.79 4.70
6303 6888 1.968540 ACTTTGCGGCAAGGAGCTC 60.969 57.895 28.40 4.71 44.79 4.09
6304 6889 2.113986 ACTTTGCGGCAAGGAGCT 59.886 55.556 28.40 6.25 44.79 4.09
6305 6890 2.256461 CACTTTGCGGCAAGGAGC 59.744 61.111 28.40 0.00 44.65 4.70
6306 6891 2.256461 GCACTTTGCGGCAAGGAG 59.744 61.111 28.40 21.95 31.71 3.69
6315 6900 1.005867 CCACCACCATGCACTTTGC 60.006 57.895 0.00 0.00 45.29 3.68
6316 6901 1.005867 GCCACCACCATGCACTTTG 60.006 57.895 0.00 0.00 0.00 2.77
6317 6902 2.209315 GGCCACCACCATGCACTTT 61.209 57.895 0.00 0.00 0.00 2.66
6318 6903 2.601367 GGCCACCACCATGCACTT 60.601 61.111 0.00 0.00 0.00 3.16
6323 6908 3.266686 TTCTCCGGCCACCACCATG 62.267 63.158 2.24 0.00 0.00 3.66
6324 6909 2.933287 TTCTCCGGCCACCACCAT 60.933 61.111 2.24 0.00 0.00 3.55
6325 6910 3.636231 CTTCTCCGGCCACCACCA 61.636 66.667 2.24 0.00 0.00 4.17
6326 6911 2.804828 CTTCTTCTCCGGCCACCACC 62.805 65.000 2.24 0.00 0.00 4.61
6327 6912 1.376037 CTTCTTCTCCGGCCACCAC 60.376 63.158 2.24 0.00 0.00 4.16
6328 6913 2.592993 CCTTCTTCTCCGGCCACCA 61.593 63.158 2.24 0.00 0.00 4.17
6329 6914 2.245438 CTCCTTCTTCTCCGGCCACC 62.245 65.000 2.24 0.00 0.00 4.61
6330 6915 1.219393 CTCCTTCTTCTCCGGCCAC 59.781 63.158 2.24 0.00 0.00 5.01
6331 6916 2.660064 GCTCCTTCTTCTCCGGCCA 61.660 63.158 2.24 0.00 0.00 5.36
6332 6917 2.188207 GCTCCTTCTTCTCCGGCC 59.812 66.667 0.00 0.00 0.00 6.13
6333 6918 2.188207 GGCTCCTTCTTCTCCGGC 59.812 66.667 0.00 0.00 0.00 6.13
6334 6919 1.035932 TACGGCTCCTTCTTCTCCGG 61.036 60.000 0.00 0.00 43.93 5.14
6335 6920 0.382515 CTACGGCTCCTTCTTCTCCG 59.617 60.000 0.00 0.00 45.04 4.63
6336 6921 1.765230 TCTACGGCTCCTTCTTCTCC 58.235 55.000 0.00 0.00 0.00 3.71
6337 6922 3.504520 CCTATCTACGGCTCCTTCTTCTC 59.495 52.174 0.00 0.00 0.00 2.87
6338 6923 3.492337 CCTATCTACGGCTCCTTCTTCT 58.508 50.000 0.00 0.00 0.00 2.85
6339 6924 2.029739 GCCTATCTACGGCTCCTTCTTC 60.030 54.545 0.00 0.00 44.17 2.87
6340 6925 1.964933 GCCTATCTACGGCTCCTTCTT 59.035 52.381 0.00 0.00 44.17 2.52
6341 6926 1.623163 GCCTATCTACGGCTCCTTCT 58.377 55.000 0.00 0.00 44.17 2.85
6349 6934 1.068472 CGGTAGCAAGCCTATCTACGG 60.068 57.143 0.00 0.00 34.92 4.02
6350 6935 1.607628 ACGGTAGCAAGCCTATCTACG 59.392 52.381 0.00 0.00 34.92 3.51
6351 6936 4.843220 TTACGGTAGCAAGCCTATCTAC 57.157 45.455 0.00 0.00 33.72 2.59
6352 6937 4.280174 CCTTTACGGTAGCAAGCCTATCTA 59.720 45.833 0.00 0.00 0.00 1.98
6353 6938 3.069729 CCTTTACGGTAGCAAGCCTATCT 59.930 47.826 0.00 0.00 0.00 1.98
6354 6939 3.391049 CCTTTACGGTAGCAAGCCTATC 58.609 50.000 0.00 0.00 0.00 2.08
6355 6940 2.104281 CCCTTTACGGTAGCAAGCCTAT 59.896 50.000 0.00 0.00 0.00 2.57
6356 6941 1.483415 CCCTTTACGGTAGCAAGCCTA 59.517 52.381 0.00 0.00 0.00 3.93
6357 6942 0.252197 CCCTTTACGGTAGCAAGCCT 59.748 55.000 0.00 0.00 0.00 4.58
6358 6943 0.251073 TCCCTTTACGGTAGCAAGCC 59.749 55.000 0.00 0.00 0.00 4.35
6359 6944 1.653151 CTCCCTTTACGGTAGCAAGC 58.347 55.000 0.00 0.00 0.00 4.01
6360 6945 1.829222 TCCTCCCTTTACGGTAGCAAG 59.171 52.381 0.00 0.00 0.00 4.01
6361 6946 1.941377 TCCTCCCTTTACGGTAGCAA 58.059 50.000 0.00 0.00 0.00 3.91
6362 6947 2.037144 GATCCTCCCTTTACGGTAGCA 58.963 52.381 0.00 0.00 0.00 3.49
6363 6948 2.037144 TGATCCTCCCTTTACGGTAGC 58.963 52.381 0.00 0.00 0.00 3.58
6364 6949 2.034305 CGTGATCCTCCCTTTACGGTAG 59.966 54.545 0.00 0.00 0.00 3.18
6365 6950 2.026641 CGTGATCCTCCCTTTACGGTA 58.973 52.381 0.00 0.00 0.00 4.02
6366 6951 0.822164 CGTGATCCTCCCTTTACGGT 59.178 55.000 0.00 0.00 0.00 4.83
6367 6952 0.529992 GCGTGATCCTCCCTTTACGG 60.530 60.000 0.00 0.00 32.69 4.02
6368 6953 0.460311 AGCGTGATCCTCCCTTTACG 59.540 55.000 0.00 0.00 34.93 3.18
6369 6954 2.693267 AAGCGTGATCCTCCCTTTAC 57.307 50.000 0.00 0.00 0.00 2.01
6370 6955 3.101437 TGTAAGCGTGATCCTCCCTTTA 58.899 45.455 0.00 0.00 0.00 1.85
6371 6956 1.906574 TGTAAGCGTGATCCTCCCTTT 59.093 47.619 0.00 0.00 0.00 3.11
6372 6957 1.207329 GTGTAAGCGTGATCCTCCCTT 59.793 52.381 0.00 0.00 0.00 3.95
6373 6958 0.824759 GTGTAAGCGTGATCCTCCCT 59.175 55.000 0.00 0.00 0.00 4.20
6374 6959 0.179081 GGTGTAAGCGTGATCCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
6375 6960 0.179081 GGGTGTAAGCGTGATCCTCC 60.179 60.000 0.00 0.00 33.03 4.30
6376 6961 0.535335 TGGGTGTAAGCGTGATCCTC 59.465 55.000 0.00 0.00 33.03 3.71
6377 6962 1.134401 CATGGGTGTAAGCGTGATCCT 60.134 52.381 0.00 0.00 33.03 3.24
6378 6963 1.299541 CATGGGTGTAAGCGTGATCC 58.700 55.000 0.00 0.00 33.03 3.36
6379 6964 0.657840 GCATGGGTGTAAGCGTGATC 59.342 55.000 0.00 0.00 33.03 2.92
6380 6965 0.253044 AGCATGGGTGTAAGCGTGAT 59.747 50.000 0.00 0.00 33.03 3.06
6381 6966 0.036164 AAGCATGGGTGTAAGCGTGA 59.964 50.000 0.00 0.00 33.03 4.35
6382 6967 0.168788 CAAGCATGGGTGTAAGCGTG 59.831 55.000 0.00 0.00 33.03 5.34
6383 6968 1.586154 GCAAGCATGGGTGTAAGCGT 61.586 55.000 0.00 0.00 33.03 5.07
6384 6969 1.137404 GCAAGCATGGGTGTAAGCG 59.863 57.895 0.00 0.00 33.03 4.68
6385 6970 0.171903 CAGCAAGCATGGGTGTAAGC 59.828 55.000 0.00 0.00 31.45 3.09
6386 6971 0.171903 GCAGCAAGCATGGGTGTAAG 59.828 55.000 0.00 0.00 40.42 2.34
6387 6972 2.266070 GCAGCAAGCATGGGTGTAA 58.734 52.632 0.00 0.00 40.42 2.41
6388 6973 4.001248 GCAGCAAGCATGGGTGTA 57.999 55.556 0.00 0.00 40.42 2.90
6397 6982 4.748679 CGCCGACTTGCAGCAAGC 62.749 66.667 31.36 22.66 44.43 4.01
6398 6983 4.093952 CCGCCGACTTGCAGCAAG 62.094 66.667 30.11 30.11 45.85 4.01
6399 6984 4.617520 TCCGCCGACTTGCAGCAA 62.618 61.111 7.81 7.81 0.00 3.91
6402 6987 3.997064 CTCCTCCGCCGACTTGCAG 62.997 68.421 0.00 0.00 0.00 4.41
6403 6988 4.069232 CTCCTCCGCCGACTTGCA 62.069 66.667 0.00 0.00 0.00 4.08
6404 6989 3.591254 AACTCCTCCGCCGACTTGC 62.591 63.158 0.00 0.00 0.00 4.01
6405 6990 1.446272 GAACTCCTCCGCCGACTTG 60.446 63.158 0.00 0.00 0.00 3.16
6406 6991 0.323178 TAGAACTCCTCCGCCGACTT 60.323 55.000 0.00 0.00 0.00 3.01
6407 6992 1.031029 GTAGAACTCCTCCGCCGACT 61.031 60.000 0.00 0.00 0.00 4.18
6408 6993 1.432657 GTAGAACTCCTCCGCCGAC 59.567 63.158 0.00 0.00 0.00 4.79
6409 6994 1.751927 GGTAGAACTCCTCCGCCGA 60.752 63.158 0.00 0.00 0.00 5.54
6410 6995 2.783288 GGGTAGAACTCCTCCGCCG 61.783 68.421 0.00 0.00 0.00 6.46
6411 6996 2.433146 GGGGTAGAACTCCTCCGCC 61.433 68.421 0.00 0.00 35.29 6.13
6412 6997 2.783288 CGGGGTAGAACTCCTCCGC 61.783 68.421 0.00 0.00 36.29 5.54
6413 6998 1.077212 TCGGGGTAGAACTCCTCCG 60.077 63.158 0.00 0.00 36.29 4.63
6414 6999 1.042003 GGTCGGGGTAGAACTCCTCC 61.042 65.000 0.00 0.00 36.29 4.30
6415 7000 0.033306 AGGTCGGGGTAGAACTCCTC 60.033 60.000 0.00 0.00 36.29 3.71
6416 7001 0.412640 AAGGTCGGGGTAGAACTCCT 59.587 55.000 0.00 0.00 36.29 3.69
6417 7002 0.535797 CAAGGTCGGGGTAGAACTCC 59.464 60.000 0.00 0.00 37.15 3.85
6418 7003 1.553706 TCAAGGTCGGGGTAGAACTC 58.446 55.000 0.00 0.00 37.15 3.01
6419 7004 1.831736 CATCAAGGTCGGGGTAGAACT 59.168 52.381 0.00 0.00 40.44 3.01
6420 7005 1.829222 TCATCAAGGTCGGGGTAGAAC 59.171 52.381 0.00 0.00 0.00 3.01
6421 7006 2.241281 TCATCAAGGTCGGGGTAGAA 57.759 50.000 0.00 0.00 0.00 2.10
6422 7007 2.434336 CAATCATCAAGGTCGGGGTAGA 59.566 50.000 0.00 0.00 0.00 2.59
6423 7008 2.434336 TCAATCATCAAGGTCGGGGTAG 59.566 50.000 0.00 0.00 0.00 3.18
6424 7009 2.434336 CTCAATCATCAAGGTCGGGGTA 59.566 50.000 0.00 0.00 0.00 3.69
6425 7010 1.210478 CTCAATCATCAAGGTCGGGGT 59.790 52.381 0.00 0.00 0.00 4.95
6426 7011 1.210478 ACTCAATCATCAAGGTCGGGG 59.790 52.381 0.00 0.00 0.00 5.73
6427 7012 2.555199 GACTCAATCATCAAGGTCGGG 58.445 52.381 0.00 0.00 0.00 5.14
6428 7013 2.196749 CGACTCAATCATCAAGGTCGG 58.803 52.381 0.00 0.00 41.50 4.79
6429 7014 2.196749 CCGACTCAATCATCAAGGTCG 58.803 52.381 0.00 0.00 43.73 4.79
6430 7015 1.936547 GCCGACTCAATCATCAAGGTC 59.063 52.381 0.00 0.00 0.00 3.85
6431 7016 1.407437 GGCCGACTCAATCATCAAGGT 60.407 52.381 0.00 0.00 0.00 3.50
6432 7017 1.134280 AGGCCGACTCAATCATCAAGG 60.134 52.381 0.00 0.00 0.00 3.61
6433 7018 2.322355 AGGCCGACTCAATCATCAAG 57.678 50.000 0.00 0.00 0.00 3.02
6434 7019 2.632377 GAAGGCCGACTCAATCATCAA 58.368 47.619 0.00 0.00 0.00 2.57
6435 7020 1.134401 GGAAGGCCGACTCAATCATCA 60.134 52.381 0.00 0.00 0.00 3.07
6436 7021 1.139853 AGGAAGGCCGACTCAATCATC 59.860 52.381 0.00 0.00 39.96 2.92
6437 7022 1.207791 AGGAAGGCCGACTCAATCAT 58.792 50.000 0.00 0.00 39.96 2.45
6438 7023 1.757118 CTAGGAAGGCCGACTCAATCA 59.243 52.381 0.00 0.00 39.96 2.57
6439 7024 1.069358 CCTAGGAAGGCCGACTCAATC 59.931 57.143 1.05 0.00 39.96 2.67
6440 7025 1.123928 CCTAGGAAGGCCGACTCAAT 58.876 55.000 1.05 0.00 39.96 2.57
6441 7026 2.591915 CCTAGGAAGGCCGACTCAA 58.408 57.895 1.05 0.00 39.96 3.02
6442 7027 4.356979 CCTAGGAAGGCCGACTCA 57.643 61.111 1.05 0.00 39.96 3.41
6451 7036 8.616076 CATAGCTAAACAATGAAACCTAGGAAG 58.384 37.037 17.98 0.00 0.00 3.46
6452 7037 8.107095 ACATAGCTAAACAATGAAACCTAGGAA 58.893 33.333 17.98 0.00 0.00 3.36
6453 7038 7.630082 ACATAGCTAAACAATGAAACCTAGGA 58.370 34.615 17.98 0.00 0.00 2.94
6454 7039 7.865706 ACATAGCTAAACAATGAAACCTAGG 57.134 36.000 7.41 7.41 0.00 3.02
6466 7051 9.899661 ACCAAAGTTCATATACATAGCTAAACA 57.100 29.630 0.00 0.00 0.00 2.83
6469 7054 9.899661 ACAACCAAAGTTCATATACATAGCTAA 57.100 29.630 0.00 0.00 32.45 3.09
6470 7055 9.325198 CACAACCAAAGTTCATATACATAGCTA 57.675 33.333 0.00 0.00 32.45 3.32
6471 7056 7.829211 ACACAACCAAAGTTCATATACATAGCT 59.171 33.333 0.00 0.00 32.45 3.32
6472 7057 7.985476 ACACAACCAAAGTTCATATACATAGC 58.015 34.615 0.00 0.00 32.45 2.97
6473 7058 9.773328 CAACACAACCAAAGTTCATATACATAG 57.227 33.333 0.00 0.00 32.45 2.23
6474 7059 9.290988 ACAACACAACCAAAGTTCATATACATA 57.709 29.630 0.00 0.00 32.45 2.29
6475 7060 8.081633 CACAACACAACCAAAGTTCATATACAT 58.918 33.333 0.00 0.00 32.45 2.29
6476 7061 7.283354 TCACAACACAACCAAAGTTCATATACA 59.717 33.333 0.00 0.00 32.45 2.29
6477 7062 7.644490 TCACAACACAACCAAAGTTCATATAC 58.356 34.615 0.00 0.00 32.45 1.47
6478 7063 7.809546 TCACAACACAACCAAAGTTCATATA 57.190 32.000 0.00 0.00 32.45 0.86
6479 7064 6.707440 TCACAACACAACCAAAGTTCATAT 57.293 33.333 0.00 0.00 32.45 1.78
6480 7065 6.151985 AGTTCACAACACAACCAAAGTTCATA 59.848 34.615 0.00 0.00 32.45 2.15
6481 7066 5.047377 AGTTCACAACACAACCAAAGTTCAT 60.047 36.000 0.00 0.00 32.45 2.57
6482 7067 4.279671 AGTTCACAACACAACCAAAGTTCA 59.720 37.500 0.00 0.00 32.45 3.18
6483 7068 4.805219 AGTTCACAACACAACCAAAGTTC 58.195 39.130 0.00 0.00 32.45 3.01
6484 7069 4.864704 AGTTCACAACACAACCAAAGTT 57.135 36.364 0.00 0.00 36.33 2.66
6485 7070 4.864704 AAGTTCACAACACAACCAAAGT 57.135 36.364 0.00 0.00 0.00 2.66
6486 7071 4.987912 ACAAAGTTCACAACACAACCAAAG 59.012 37.500 0.00 0.00 0.00 2.77
6487 7072 4.950050 ACAAAGTTCACAACACAACCAAA 58.050 34.783 0.00 0.00 0.00 3.28
6488 7073 4.592485 ACAAAGTTCACAACACAACCAA 57.408 36.364 0.00 0.00 0.00 3.67
6489 7074 4.380023 GCTACAAAGTTCACAACACAACCA 60.380 41.667 0.00 0.00 0.00 3.67
6490 7075 4.102649 GCTACAAAGTTCACAACACAACC 58.897 43.478 0.00 0.00 0.00 3.77
6491 7076 3.783943 CGCTACAAAGTTCACAACACAAC 59.216 43.478 0.00 0.00 0.00 3.32
6492 7077 3.729462 GCGCTACAAAGTTCACAACACAA 60.729 43.478 0.00 0.00 0.00 3.33
6493 7078 2.223157 GCGCTACAAAGTTCACAACACA 60.223 45.455 0.00 0.00 0.00 3.72
6494 7079 2.372350 GCGCTACAAAGTTCACAACAC 58.628 47.619 0.00 0.00 0.00 3.32
6495 7080 1.004398 CGCGCTACAAAGTTCACAACA 60.004 47.619 5.56 0.00 0.00 3.33
6496 7081 1.259507 TCGCGCTACAAAGTTCACAAC 59.740 47.619 5.56 0.00 0.00 3.32
6497 7082 1.573026 TCGCGCTACAAAGTTCACAA 58.427 45.000 5.56 0.00 0.00 3.33
6498 7083 1.573026 TTCGCGCTACAAAGTTCACA 58.427 45.000 5.56 0.00 0.00 3.58
6499 7084 2.875080 ATTCGCGCTACAAAGTTCAC 57.125 45.000 5.56 0.00 0.00 3.18
6500 7085 2.095969 CCAATTCGCGCTACAAAGTTCA 60.096 45.455 5.56 0.00 0.00 3.18
6501 7086 2.095919 ACCAATTCGCGCTACAAAGTTC 60.096 45.455 5.56 0.00 0.00 3.01
6502 7087 1.877443 ACCAATTCGCGCTACAAAGTT 59.123 42.857 5.56 0.00 0.00 2.66
6503 7088 1.519408 ACCAATTCGCGCTACAAAGT 58.481 45.000 5.56 0.00 0.00 2.66
6504 7089 2.611974 AACCAATTCGCGCTACAAAG 57.388 45.000 5.56 0.00 0.00 2.77
6505 7090 3.357166 AAAACCAATTCGCGCTACAAA 57.643 38.095 5.56 0.00 0.00 2.83
6506 7091 3.357166 AAAAACCAATTCGCGCTACAA 57.643 38.095 5.56 0.00 0.00 2.41
6527 7112 9.967451 TCCACCATAGTTCATTCTGTAAATTTA 57.033 29.630 0.00 0.00 0.00 1.40
6528 7113 8.877864 TCCACCATAGTTCATTCTGTAAATTT 57.122 30.769 0.00 0.00 0.00 1.82
6529 7114 9.479549 AATCCACCATAGTTCATTCTGTAAATT 57.520 29.630 0.00 0.00 0.00 1.82
6531 7116 9.613428 CTAATCCACCATAGTTCATTCTGTAAA 57.387 33.333 0.00 0.00 0.00 2.01
6532 7117 8.768397 ACTAATCCACCATAGTTCATTCTGTAA 58.232 33.333 0.00 0.00 0.00 2.41
6533 7118 8.319057 ACTAATCCACCATAGTTCATTCTGTA 57.681 34.615 0.00 0.00 0.00 2.74
6534 7119 7.200434 ACTAATCCACCATAGTTCATTCTGT 57.800 36.000 0.00 0.00 0.00 3.41
6542 7127 5.431765 CAGCTGAACTAATCCACCATAGTT 58.568 41.667 8.42 0.00 43.22 2.24
6543 7128 4.141620 CCAGCTGAACTAATCCACCATAGT 60.142 45.833 17.39 0.00 33.89 2.12
6544 7129 4.384056 CCAGCTGAACTAATCCACCATAG 58.616 47.826 17.39 0.00 0.00 2.23
6545 7130 3.136443 CCCAGCTGAACTAATCCACCATA 59.864 47.826 17.39 0.00 0.00 2.74
6546 7131 2.092212 CCCAGCTGAACTAATCCACCAT 60.092 50.000 17.39 0.00 0.00 3.55
6547 7132 1.281867 CCCAGCTGAACTAATCCACCA 59.718 52.381 17.39 0.00 0.00 4.17
6548 7133 1.559682 TCCCAGCTGAACTAATCCACC 59.440 52.381 17.39 0.00 0.00 4.61
6549 7134 2.633488 GTCCCAGCTGAACTAATCCAC 58.367 52.381 17.39 0.00 0.00 4.02
6550 7135 1.559682 GGTCCCAGCTGAACTAATCCA 59.440 52.381 17.39 0.00 0.00 3.41
6551 7136 1.840635 AGGTCCCAGCTGAACTAATCC 59.159 52.381 17.39 7.52 28.10 3.01
6552 7137 3.636153 AAGGTCCCAGCTGAACTAATC 57.364 47.619 17.39 0.55 30.32 1.75
6553 7138 5.014228 ACTTTAAGGTCCCAGCTGAACTAAT 59.986 40.000 17.39 6.29 30.32 1.73
6554 7139 4.349930 ACTTTAAGGTCCCAGCTGAACTAA 59.650 41.667 17.39 6.12 30.32 2.24
6555 7140 3.908103 ACTTTAAGGTCCCAGCTGAACTA 59.092 43.478 17.39 0.00 30.32 2.24
6556 7141 2.711547 ACTTTAAGGTCCCAGCTGAACT 59.288 45.455 17.39 0.00 32.34 3.01
6557 7142 3.141767 ACTTTAAGGTCCCAGCTGAAC 57.858 47.619 17.39 12.86 0.00 3.18
6558 7143 3.497942 GGAACTTTAAGGTCCCAGCTGAA 60.498 47.826 17.79 0.00 46.52 3.02
6559 7144 2.039879 GGAACTTTAAGGTCCCAGCTGA 59.960 50.000 17.79 0.00 46.52 4.26
6560 7145 2.437413 GGAACTTTAAGGTCCCAGCTG 58.563 52.381 17.79 6.78 46.52 4.24
6561 7146 2.881111 GGAACTTTAAGGTCCCAGCT 57.119 50.000 17.79 0.00 46.52 4.24
6567 7152 3.994204 TTTTGCGGGAACTTTAAGGTC 57.006 42.857 0.59 0.59 0.00 3.85
6568 7153 4.557895 CGATTTTTGCGGGAACTTTAAGGT 60.558 41.667 0.00 0.00 0.00 3.50
6569 7154 3.917985 CGATTTTTGCGGGAACTTTAAGG 59.082 43.478 0.00 0.00 0.00 2.69
6570 7155 4.542735 ACGATTTTTGCGGGAACTTTAAG 58.457 39.130 0.00 0.00 0.00 1.85
6571 7156 4.571372 ACGATTTTTGCGGGAACTTTAA 57.429 36.364 0.00 0.00 0.00 1.52
6572 7157 4.571372 AACGATTTTTGCGGGAACTTTA 57.429 36.364 0.00 0.00 0.00 1.85
6573 7158 3.446310 AACGATTTTTGCGGGAACTTT 57.554 38.095 0.00 0.00 0.00 2.66
6574 7159 3.181485 TGAAACGATTTTTGCGGGAACTT 60.181 39.130 0.00 0.00 0.00 2.66
6575 7160 2.359531 TGAAACGATTTTTGCGGGAACT 59.640 40.909 0.00 0.00 0.00 3.01
6576 7161 2.724174 CTGAAACGATTTTTGCGGGAAC 59.276 45.455 0.00 0.00 0.00 3.62
6577 7162 2.287909 CCTGAAACGATTTTTGCGGGAA 60.288 45.455 0.00 0.00 0.00 3.97
6578 7163 1.268352 CCTGAAACGATTTTTGCGGGA 59.732 47.619 0.00 0.00 0.00 5.14
6579 7164 1.668628 CCCTGAAACGATTTTTGCGGG 60.669 52.381 0.00 0.00 0.00 6.13
6580 7165 1.668628 CCCCTGAAACGATTTTTGCGG 60.669 52.381 0.00 0.00 0.00 5.69
6581 7166 1.668628 CCCCCTGAAACGATTTTTGCG 60.669 52.381 0.00 0.00 0.00 4.85
6582 7167 1.616374 TCCCCCTGAAACGATTTTTGC 59.384 47.619 0.00 0.00 0.00 3.68
6583 7168 2.029380 GGTCCCCCTGAAACGATTTTTG 60.029 50.000 0.00 0.00 0.00 2.44
6584 7169 2.244695 GGTCCCCCTGAAACGATTTTT 58.755 47.619 0.00 0.00 0.00 1.94
6585 7170 1.549265 GGGTCCCCCTGAAACGATTTT 60.549 52.381 0.00 0.00 41.34 1.82
6586 7171 0.039180 GGGTCCCCCTGAAACGATTT 59.961 55.000 0.00 0.00 41.34 2.17
6587 7172 1.689412 GGGTCCCCCTGAAACGATT 59.311 57.895 0.00 0.00 41.34 3.34
6588 7173 3.411700 GGGTCCCCCTGAAACGAT 58.588 61.111 0.00 0.00 41.34 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.