Multiple sequence alignment - TraesCS7A01G304600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G304600 | chr7A | 100.000 | 7070 | 0 | 0 | 1 | 7070 | 428824825 | 428817756 | 0.000000e+00 | 13056.0 |
1 | TraesCS7A01G304600 | chr7A | 93.215 | 678 | 34 | 6 | 1 | 668 | 97242683 | 97242008 | 0.000000e+00 | 987.0 |
2 | TraesCS7A01G304600 | chr7A | 82.553 | 470 | 56 | 13 | 222 | 669 | 467784474 | 467784009 | 2.390000e-104 | 390.0 |
3 | TraesCS7A01G304600 | chr7A | 100.000 | 29 | 0 | 0 | 6311 | 6339 | 416156357 | 416156329 | 4.000000e-03 | 54.7 |
4 | TraesCS7A01G304600 | chr7D | 93.790 | 2995 | 98 | 25 | 3533 | 6464 | 380191706 | 380188737 | 0.000000e+00 | 4420.0 |
5 | TraesCS7A01G304600 | chr7D | 93.923 | 1267 | 36 | 19 | 660 | 1891 | 380194533 | 380193273 | 0.000000e+00 | 1875.0 |
6 | TraesCS7A01G304600 | chr7D | 96.759 | 648 | 20 | 1 | 2654 | 3301 | 380192352 | 380191706 | 0.000000e+00 | 1079.0 |
7 | TraesCS7A01G304600 | chr7D | 94.600 | 537 | 27 | 1 | 1966 | 2500 | 380192881 | 380192345 | 0.000000e+00 | 830.0 |
8 | TraesCS7A01G304600 | chr7D | 88.123 | 682 | 37 | 16 | 1 | 668 | 164537957 | 164538608 | 0.000000e+00 | 771.0 |
9 | TraesCS7A01G304600 | chr7D | 90.693 | 505 | 30 | 5 | 161 | 653 | 628764733 | 628765232 | 0.000000e+00 | 656.0 |
10 | TraesCS7A01G304600 | chr7D | 97.403 | 154 | 4 | 0 | 2501 | 2654 | 617790592 | 617790745 | 5.440000e-66 | 263.0 |
11 | TraesCS7A01G304600 | chr7D | 90.526 | 95 | 9 | 0 | 6800 | 6894 | 380187881 | 380187787 | 7.450000e-25 | 126.0 |
12 | TraesCS7A01G304600 | chr7D | 97.143 | 70 | 2 | 0 | 6460 | 6529 | 380188628 | 380188559 | 1.250000e-22 | 119.0 |
13 | TraesCS7A01G304600 | chr7D | 78.395 | 162 | 33 | 2 | 4491 | 4651 | 365319893 | 365319733 | 3.490000e-18 | 104.0 |
14 | TraesCS7A01G304600 | chr7D | 88.462 | 52 | 5 | 1 | 4591 | 4641 | 41472591 | 41472540 | 2.130000e-05 | 62.1 |
15 | TraesCS7A01G304600 | chr7D | 82.278 | 79 | 7 | 4 | 4491 | 4563 | 365319660 | 365319737 | 2.130000e-05 | 62.1 |
16 | TraesCS7A01G304600 | chr7B | 92.642 | 1862 | 94 | 20 | 663 | 2500 | 375205244 | 375203402 | 0.000000e+00 | 2639.0 |
17 | TraesCS7A01G304600 | chr7B | 93.717 | 1687 | 65 | 12 | 4655 | 6315 | 375200995 | 375199324 | 0.000000e+00 | 2490.0 |
18 | TraesCS7A01G304600 | chr7B | 96.549 | 1159 | 23 | 6 | 3497 | 4645 | 375202278 | 375201127 | 0.000000e+00 | 1903.0 |
19 | TraesCS7A01G304600 | chr7B | 95.833 | 840 | 34 | 1 | 2654 | 3493 | 375203409 | 375202571 | 0.000000e+00 | 1356.0 |
20 | TraesCS7A01G304600 | chr7B | 95.890 | 146 | 5 | 1 | 6384 | 6529 | 375199320 | 375199176 | 1.190000e-57 | 235.0 |
21 | TraesCS7A01G304600 | chr7B | 79.612 | 206 | 23 | 10 | 4513 | 4710 | 660245012 | 660244818 | 5.760000e-26 | 130.0 |
22 | TraesCS7A01G304600 | chr7B | 91.379 | 58 | 5 | 0 | 6837 | 6894 | 375198927 | 375198870 | 5.880000e-11 | 80.5 |
23 | TraesCS7A01G304600 | chr1A | 93.072 | 664 | 32 | 6 | 1 | 653 | 76378144 | 76377484 | 0.000000e+00 | 959.0 |
24 | TraesCS7A01G304600 | chr1A | 92.643 | 666 | 36 | 8 | 1 | 654 | 502502461 | 502503125 | 0.000000e+00 | 946.0 |
25 | TraesCS7A01G304600 | chr1A | 93.827 | 243 | 15 | 0 | 6527 | 6769 | 65260462 | 65260220 | 4.030000e-97 | 366.0 |
26 | TraesCS7A01G304600 | chr1A | 94.413 | 179 | 10 | 0 | 6892 | 7070 | 456700381 | 456700203 | 6.990000e-70 | 276.0 |
27 | TraesCS7A01G304600 | chr4D | 92.760 | 663 | 34 | 7 | 3 | 653 | 35124379 | 35123719 | 0.000000e+00 | 946.0 |
28 | TraesCS7A01G304600 | chr4D | 92.018 | 664 | 39 | 7 | 1 | 653 | 364026567 | 364025907 | 0.000000e+00 | 920.0 |
29 | TraesCS7A01G304600 | chr4D | 88.840 | 681 | 49 | 13 | 3 | 668 | 8713330 | 8712662 | 0.000000e+00 | 811.0 |
30 | TraesCS7A01G304600 | chr4D | 84.884 | 172 | 14 | 4 | 4492 | 4656 | 294346465 | 294346299 | 5.670000e-36 | 163.0 |
31 | TraesCS7A01G304600 | chr4D | 81.013 | 158 | 20 | 4 | 4498 | 4646 | 65179420 | 65179264 | 4.480000e-22 | 117.0 |
32 | TraesCS7A01G304600 | chr4D | 90.566 | 53 | 4 | 1 | 4492 | 4543 | 65537974 | 65537922 | 1.270000e-07 | 69.4 |
33 | TraesCS7A01G304600 | chr1D | 92.492 | 666 | 36 | 4 | 1 | 653 | 463250232 | 463250896 | 0.000000e+00 | 941.0 |
34 | TraesCS7A01G304600 | chr1D | 96.732 | 153 | 5 | 0 | 2501 | 2653 | 418199584 | 418199432 | 9.100000e-64 | 255.0 |
35 | TraesCS7A01G304600 | chr1D | 78.571 | 168 | 29 | 2 | 4491 | 4651 | 39956466 | 39956633 | 3.490000e-18 | 104.0 |
36 | TraesCS7A01G304600 | chr1D | 89.744 | 78 | 8 | 0 | 4541 | 4618 | 150940144 | 150940221 | 4.510000e-17 | 100.0 |
37 | TraesCS7A01G304600 | chr6D | 92.331 | 665 | 38 | 6 | 1 | 653 | 449814765 | 449815428 | 0.000000e+00 | 933.0 |
38 | TraesCS7A01G304600 | chr6D | 96.732 | 153 | 5 | 0 | 2501 | 2653 | 450832117 | 450831965 | 9.100000e-64 | 255.0 |
39 | TraesCS7A01G304600 | chr6D | 83.815 | 173 | 20 | 1 | 4492 | 4656 | 310399525 | 310399697 | 2.640000e-34 | 158.0 |
40 | TraesCS7A01G304600 | chr6D | 94.286 | 70 | 4 | 0 | 4567 | 4636 | 309039843 | 309039912 | 2.700000e-19 | 108.0 |
41 | TraesCS7A01G304600 | chr3D | 92.447 | 662 | 36 | 7 | 3 | 653 | 606545102 | 606545760 | 0.000000e+00 | 933.0 |
42 | TraesCS7A01G304600 | chr3D | 90.441 | 680 | 43 | 11 | 3 | 667 | 11326663 | 11327335 | 0.000000e+00 | 876.0 |
43 | TraesCS7A01G304600 | chr3D | 98.052 | 154 | 3 | 0 | 2500 | 2653 | 26165694 | 26165847 | 1.170000e-67 | 268.0 |
44 | TraesCS7A01G304600 | chr3D | 86.047 | 172 | 17 | 1 | 4492 | 4656 | 178652067 | 178651896 | 2.030000e-40 | 178.0 |
45 | TraesCS7A01G304600 | chr3D | 79.518 | 166 | 25 | 6 | 4491 | 4648 | 335667494 | 335667330 | 7.500000e-20 | 110.0 |
46 | TraesCS7A01G304600 | chr3D | 88.889 | 54 | 4 | 2 | 4491 | 4543 | 159794803 | 159794751 | 1.650000e-06 | 65.8 |
47 | TraesCS7A01G304600 | chr5A | 92.331 | 665 | 33 | 6 | 1 | 653 | 261800843 | 261801501 | 0.000000e+00 | 929.0 |
48 | TraesCS7A01G304600 | chr5A | 80.203 | 591 | 64 | 21 | 5686 | 6248 | 516589038 | 516588473 | 1.850000e-105 | 394.0 |
49 | TraesCS7A01G304600 | chr5A | 96.732 | 153 | 5 | 0 | 2501 | 2653 | 643242132 | 643241980 | 9.100000e-64 | 255.0 |
50 | TraesCS7A01G304600 | chr5A | 87.037 | 216 | 15 | 3 | 465 | 668 | 670269676 | 670269890 | 1.530000e-56 | 231.0 |
51 | TraesCS7A01G304600 | chr5A | 84.932 | 146 | 17 | 4 | 4507 | 4652 | 692047032 | 692047172 | 7.390000e-30 | 143.0 |
52 | TraesCS7A01G304600 | chr2D | 94.148 | 581 | 31 | 3 | 1 | 581 | 493077028 | 493076451 | 0.000000e+00 | 881.0 |
53 | TraesCS7A01G304600 | chr2D | 98.039 | 153 | 3 | 0 | 2501 | 2653 | 215831967 | 215831815 | 4.200000e-67 | 267.0 |
54 | TraesCS7A01G304600 | chr2D | 83.436 | 163 | 20 | 4 | 4497 | 4656 | 263511948 | 263511790 | 2.060000e-30 | 145.0 |
55 | TraesCS7A01G304600 | chr6B | 81.803 | 599 | 61 | 19 | 5675 | 6248 | 439431524 | 439432099 | 6.460000e-125 | 459.0 |
56 | TraesCS7A01G304600 | chr6B | 92.593 | 189 | 12 | 1 | 6884 | 7070 | 91037853 | 91038041 | 3.250000e-68 | 270.0 |
57 | TraesCS7A01G304600 | chrUn | 85.909 | 440 | 45 | 7 | 226 | 653 | 116844718 | 116844284 | 3.010000e-123 | 453.0 |
58 | TraesCS7A01G304600 | chr6A | 90.058 | 342 | 30 | 4 | 4110 | 4448 | 603947463 | 603947123 | 2.340000e-119 | 440.0 |
59 | TraesCS7A01G304600 | chr6A | 93.117 | 247 | 17 | 0 | 6521 | 6767 | 427618878 | 427619124 | 5.210000e-96 | 363.0 |
60 | TraesCS7A01G304600 | chr6A | 94.972 | 179 | 9 | 0 | 6892 | 7070 | 561345534 | 561345356 | 1.500000e-71 | 281.0 |
61 | TraesCS7A01G304600 | chr6A | 94.413 | 179 | 10 | 0 | 6892 | 7070 | 584924228 | 584924406 | 6.990000e-70 | 276.0 |
62 | TraesCS7A01G304600 | chr2A | 80.508 | 590 | 64 | 20 | 5686 | 6248 | 246468191 | 246468756 | 8.540000e-109 | 405.0 |
63 | TraesCS7A01G304600 | chr2A | 94.215 | 242 | 14 | 0 | 6527 | 6768 | 84977769 | 84977528 | 3.120000e-98 | 370.0 |
64 | TraesCS7A01G304600 | chr2A | 94.215 | 242 | 14 | 0 | 6526 | 6767 | 350400394 | 350400635 | 3.120000e-98 | 370.0 |
65 | TraesCS7A01G304600 | chr2A | 94.191 | 241 | 14 | 0 | 6527 | 6767 | 753083163 | 753083403 | 1.120000e-97 | 368.0 |
66 | TraesCS7A01G304600 | chr2A | 95.531 | 179 | 8 | 0 | 6892 | 7070 | 115096975 | 115096797 | 3.230000e-73 | 287.0 |
67 | TraesCS7A01G304600 | chr2A | 94.972 | 179 | 9 | 0 | 6892 | 7070 | 628032986 | 628033164 | 1.500000e-71 | 281.0 |
68 | TraesCS7A01G304600 | chr3B | 93.281 | 253 | 17 | 0 | 6517 | 6769 | 497096324 | 497096576 | 2.410000e-99 | 374.0 |
69 | TraesCS7A01G304600 | chr3B | 93.173 | 249 | 17 | 0 | 6520 | 6768 | 650648559 | 650648311 | 4.030000e-97 | 366.0 |
70 | TraesCS7A01G304600 | chr3B | 93.989 | 183 | 10 | 1 | 6889 | 7070 | 814837294 | 814837476 | 6.990000e-70 | 276.0 |
71 | TraesCS7A01G304600 | chr3B | 86.047 | 172 | 17 | 3 | 4492 | 4656 | 257099197 | 257099026 | 2.030000e-40 | 178.0 |
72 | TraesCS7A01G304600 | chr3B | 77.711 | 166 | 27 | 8 | 4491 | 4648 | 434055037 | 434054874 | 7.550000e-15 | 93.5 |
73 | TraesCS7A01G304600 | chr3A | 94.191 | 241 | 14 | 0 | 6527 | 6767 | 457673465 | 457673225 | 1.120000e-97 | 368.0 |
74 | TraesCS7A01G304600 | chr3A | 93.827 | 243 | 15 | 0 | 6527 | 6769 | 746884416 | 746884658 | 4.030000e-97 | 366.0 |
75 | TraesCS7A01G304600 | chr3A | 96.078 | 153 | 5 | 1 | 2501 | 2653 | 593355716 | 593355867 | 1.520000e-61 | 248.0 |
76 | TraesCS7A01G304600 | chr3A | 84.884 | 172 | 19 | 3 | 4492 | 4656 | 221275231 | 221275060 | 4.390000e-37 | 167.0 |
77 | TraesCS7A01G304600 | chr3A | 79.518 | 166 | 25 | 6 | 4491 | 4648 | 453656395 | 453656231 | 7.500000e-20 | 110.0 |
78 | TraesCS7A01G304600 | chr4A | 94.915 | 177 | 9 | 0 | 6894 | 7070 | 433016182 | 433016006 | 1.940000e-70 | 278.0 |
79 | TraesCS7A01G304600 | chr1B | 94.413 | 179 | 10 | 0 | 6892 | 7070 | 368956115 | 368956293 | 6.990000e-70 | 276.0 |
80 | TraesCS7A01G304600 | chr1B | 90.541 | 74 | 7 | 0 | 4545 | 4618 | 231644097 | 231644170 | 1.620000e-16 | 99.0 |
81 | TraesCS7A01G304600 | chr1B | 91.837 | 49 | 4 | 0 | 4493 | 4541 | 174110164 | 174110116 | 1.270000e-07 | 69.4 |
82 | TraesCS7A01G304600 | chr1B | 91.111 | 45 | 4 | 0 | 4575 | 4619 | 444347121 | 444347165 | 2.130000e-05 | 62.1 |
83 | TraesCS7A01G304600 | chr5B | 96.795 | 156 | 5 | 0 | 2501 | 2656 | 291787006 | 291786851 | 1.960000e-65 | 261.0 |
84 | TraesCS7A01G304600 | chr5B | 89.655 | 116 | 8 | 4 | 4543 | 4656 | 533479636 | 533479523 | 2.060000e-30 | 145.0 |
85 | TraesCS7A01G304600 | chr5B | 94.340 | 53 | 3 | 0 | 4491 | 4543 | 302063657 | 302063709 | 1.630000e-11 | 82.4 |
86 | TraesCS7A01G304600 | chr5D | 95.513 | 156 | 7 | 0 | 2501 | 2656 | 257502288 | 257502133 | 4.230000e-62 | 250.0 |
87 | TraesCS7A01G304600 | chr5D | 92.453 | 53 | 4 | 0 | 4491 | 4543 | 267617440 | 267617492 | 7.600000e-10 | 76.8 |
88 | TraesCS7A01G304600 | chr4B | 85.465 | 172 | 13 | 4 | 4492 | 4656 | 362144226 | 362144060 | 1.220000e-37 | 169.0 |
89 | TraesCS7A01G304600 | chr4B | 95.652 | 46 | 2 | 0 | 4491 | 4536 | 48103240 | 48103195 | 2.740000e-09 | 75.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G304600 | chr7A | 428817756 | 428824825 | 7069 | True | 13056.000000 | 13056 | 100.000000 | 1 | 7070 | 1 | chr7A.!!$R3 | 7069 |
1 | TraesCS7A01G304600 | chr7A | 97242008 | 97242683 | 675 | True | 987.000000 | 987 | 93.215000 | 1 | 668 | 1 | chr7A.!!$R1 | 667 |
2 | TraesCS7A01G304600 | chr7D | 380187787 | 380194533 | 6746 | True | 1408.166667 | 4420 | 94.456833 | 660 | 6894 | 6 | chr7D.!!$R3 | 6234 |
3 | TraesCS7A01G304600 | chr7D | 164537957 | 164538608 | 651 | False | 771.000000 | 771 | 88.123000 | 1 | 668 | 1 | chr7D.!!$F1 | 667 |
4 | TraesCS7A01G304600 | chr7B | 375198870 | 375205244 | 6374 | True | 1450.583333 | 2639 | 94.335000 | 663 | 6894 | 6 | chr7B.!!$R2 | 6231 |
5 | TraesCS7A01G304600 | chr1A | 76377484 | 76378144 | 660 | True | 959.000000 | 959 | 93.072000 | 1 | 653 | 1 | chr1A.!!$R2 | 652 |
6 | TraesCS7A01G304600 | chr1A | 502502461 | 502503125 | 664 | False | 946.000000 | 946 | 92.643000 | 1 | 654 | 1 | chr1A.!!$F1 | 653 |
7 | TraesCS7A01G304600 | chr4D | 35123719 | 35124379 | 660 | True | 946.000000 | 946 | 92.760000 | 3 | 653 | 1 | chr4D.!!$R2 | 650 |
8 | TraesCS7A01G304600 | chr4D | 364025907 | 364026567 | 660 | True | 920.000000 | 920 | 92.018000 | 1 | 653 | 1 | chr4D.!!$R6 | 652 |
9 | TraesCS7A01G304600 | chr4D | 8712662 | 8713330 | 668 | True | 811.000000 | 811 | 88.840000 | 3 | 668 | 1 | chr4D.!!$R1 | 665 |
10 | TraesCS7A01G304600 | chr1D | 463250232 | 463250896 | 664 | False | 941.000000 | 941 | 92.492000 | 1 | 653 | 1 | chr1D.!!$F3 | 652 |
11 | TraesCS7A01G304600 | chr6D | 449814765 | 449815428 | 663 | False | 933.000000 | 933 | 92.331000 | 1 | 653 | 1 | chr6D.!!$F3 | 652 |
12 | TraesCS7A01G304600 | chr3D | 606545102 | 606545760 | 658 | False | 933.000000 | 933 | 92.447000 | 3 | 653 | 1 | chr3D.!!$F3 | 650 |
13 | TraesCS7A01G304600 | chr3D | 11326663 | 11327335 | 672 | False | 876.000000 | 876 | 90.441000 | 3 | 667 | 1 | chr3D.!!$F1 | 664 |
14 | TraesCS7A01G304600 | chr5A | 261800843 | 261801501 | 658 | False | 929.000000 | 929 | 92.331000 | 1 | 653 | 1 | chr5A.!!$F1 | 652 |
15 | TraesCS7A01G304600 | chr5A | 516588473 | 516589038 | 565 | True | 394.000000 | 394 | 80.203000 | 5686 | 6248 | 1 | chr5A.!!$R1 | 562 |
16 | TraesCS7A01G304600 | chr2D | 493076451 | 493077028 | 577 | True | 881.000000 | 881 | 94.148000 | 1 | 581 | 1 | chr2D.!!$R3 | 580 |
17 | TraesCS7A01G304600 | chr6B | 439431524 | 439432099 | 575 | False | 459.000000 | 459 | 81.803000 | 5675 | 6248 | 1 | chr6B.!!$F2 | 573 |
18 | TraesCS7A01G304600 | chr2A | 246468191 | 246468756 | 565 | False | 405.000000 | 405 | 80.508000 | 5686 | 6248 | 1 | chr2A.!!$F1 | 562 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
539 | 544 | 0.395862 | GTGTGAGAGGGATCGGGAGA | 60.396 | 60.0 | 0.0 | 0.0 | 46.90 | 3.71 | F |
908 | 961 | 0.750249 | GGAGGAAGAGAGGTGCTAGC | 59.250 | 60.0 | 8.1 | 8.1 | 0.00 | 3.42 | F |
2500 | 2877 | 0.107654 | AGCCTTACTTCGTGCCATCC | 60.108 | 55.0 | 0.0 | 0.0 | 0.00 | 3.51 | F |
2573 | 2950 | 0.040425 | GCGCCTTACAAATATGCCCG | 60.040 | 55.0 | 0.0 | 0.0 | 0.00 | 6.13 | F |
2574 | 2951 | 0.040425 | CGCCTTACAAATATGCCCGC | 60.040 | 55.0 | 0.0 | 0.0 | 0.00 | 6.13 | F |
2635 | 3012 | 0.179097 | GCTCGCCTTAGGTCTCCTTG | 60.179 | 60.0 | 0.0 | 0.0 | 34.61 | 3.61 | F |
2636 | 3013 | 0.179097 | CTCGCCTTAGGTCTCCTTGC | 60.179 | 60.0 | 0.0 | 0.0 | 34.61 | 4.01 | F |
2645 | 3022 | 0.322187 | GGTCTCCTTGCCGCCTTAAA | 60.322 | 55.0 | 0.0 | 0.0 | 0.00 | 1.52 | F |
4378 | 5047 | 0.602562 | ACGGCAACAAATGTGGATGG | 59.397 | 50.0 | 0.0 | 0.0 | 0.00 | 3.51 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2322 | 2699 | 0.249741 | CCCTCGACAAAAGACACGGT | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 | R |
2554 | 2931 | 0.040425 | CGGGCATATTTGTAAGGCGC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 | R |
3422 | 3799 | 0.038166 | GAGTGGGGGCATTCTTGTCA | 59.962 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 | R |
4092 | 4761 | 2.287188 | GGTGACTGCATTCACAAGTGTG | 60.287 | 50.000 | 30.86 | 5.02 | 46.68 | 3.82 | R |
4378 | 5047 | 4.036734 | TGTGGTTCATTTTGCTGAGACTTC | 59.963 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 | R |
4777 | 5576 | 1.859302 | AGTGAACCCCAAACTGCAAA | 58.141 | 45.000 | 0.00 | 0.00 | 0.00 | 3.68 | R |
4813 | 5612 | 3.629058 | AGCACATACGCACTATAACTCG | 58.371 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 | R |
4938 | 5745 | 9.520515 | ACTAATGATGATTTGACCAGTTAACTT | 57.479 | 29.630 | 5.07 | 0.00 | 0.00 | 2.66 | R |
6363 | 7217 | 0.033796 | CCGTACCTACTCCACCTGGA | 60.034 | 60.000 | 0.00 | 0.00 | 43.08 | 3.86 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
539 | 544 | 0.395862 | GTGTGAGAGGGATCGGGAGA | 60.396 | 60.000 | 0.00 | 0.00 | 46.90 | 3.71 |
561 | 569 | 1.733526 | AAAAAGAGGTGTGTGCGCC | 59.266 | 52.632 | 4.18 | 0.00 | 45.35 | 6.53 |
654 | 675 | 2.349580 | CACACATGTGGCAGTTATCGAG | 59.650 | 50.000 | 28.64 | 0.02 | 42.10 | 4.04 |
656 | 677 | 2.604914 | CACATGTGGCAGTTATCGAGAC | 59.395 | 50.000 | 18.51 | 0.00 | 0.00 | 3.36 |
784 | 805 | 3.274288 | CTGGGACTCAACAATTCTAGCC | 58.726 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
786 | 807 | 3.266772 | TGGGACTCAACAATTCTAGCCAT | 59.733 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
839 | 860 | 6.885376 | TCCTACAAACCACTCAAAACAAACTA | 59.115 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
873 | 926 | 8.202745 | AGCATACAGTAGAGAAGTTAAAATGC | 57.797 | 34.615 | 0.00 | 0.00 | 36.08 | 3.56 |
897 | 950 | 6.486993 | GCTAAAAGAAAAACTCAGGAGGAAGA | 59.513 | 38.462 | 0.83 | 0.00 | 0.00 | 2.87 |
908 | 961 | 0.750249 | GGAGGAAGAGAGGTGCTAGC | 59.250 | 60.000 | 8.10 | 8.10 | 0.00 | 3.42 |
910 | 963 | 1.136110 | GAGGAAGAGAGGTGCTAGCAC | 59.864 | 57.143 | 34.99 | 34.99 | 45.49 | 4.40 |
945 | 998 | 6.869913 | ACAAATCAGGAAACAACAGCAATATG | 59.130 | 34.615 | 0.00 | 0.00 | 0.00 | 1.78 |
949 | 1002 | 8.978874 | ATCAGGAAACAACAGCAATATGTATA | 57.021 | 30.769 | 0.00 | 0.00 | 31.70 | 1.47 |
1437 | 1490 | 1.033746 | ACGCAAAGATCTGGCCATGG | 61.034 | 55.000 | 5.51 | 7.63 | 0.00 | 3.66 |
1619 | 1674 | 3.516981 | TGCAGCAGAGTCTAGTGATTC | 57.483 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
1672 | 1727 | 2.122167 | GGGTGTTTGCGGGTCAACA | 61.122 | 57.895 | 0.00 | 0.00 | 33.73 | 3.33 |
1778 | 1833 | 5.020795 | TGTAAGATGTTGGGTGCTAGAGTA | 58.979 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
1984 | 2358 | 3.458487 | ACAGGGTATGGATTGGAGGTAAC | 59.542 | 47.826 | 0.00 | 0.00 | 0.00 | 2.50 |
2016 | 2390 | 6.777091 | TGGATGATTGGGAAATGTATAACTGG | 59.223 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
2221 | 2596 | 6.199719 | GCTTGCGTACTTATATTTACCTCGTT | 59.800 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
2271 | 2648 | 1.262950 | CGCGTCTGGTGAATTTTGTGA | 59.737 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
2322 | 2699 | 4.330944 | TTGTGCTTAGAAAAGACGAGGA | 57.669 | 40.909 | 0.00 | 0.00 | 34.37 | 3.71 |
2336 | 2713 | 1.137513 | CGAGGACCGTGTCTTTTGTC | 58.862 | 55.000 | 4.41 | 0.00 | 32.47 | 3.18 |
2341 | 2718 | 0.249741 | ACCGTGTCTTTTGTCGAGGG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2367 | 2744 | 1.293179 | GACCTGTTGCCAAATGCCC | 59.707 | 57.895 | 0.00 | 0.00 | 40.16 | 5.36 |
2379 | 2756 | 0.889186 | AAATGCCCGCGTCTGAAAGT | 60.889 | 50.000 | 4.92 | 0.00 | 33.76 | 2.66 |
2399 | 2776 | 6.992063 | AAGTCTCATAAACTTGTAGCCATG | 57.008 | 37.500 | 0.00 | 0.00 | 35.68 | 3.66 |
2418 | 2795 | 4.202141 | CCATGCAAAAATATCCATGGTCGT | 60.202 | 41.667 | 12.58 | 1.89 | 46.02 | 4.34 |
2435 | 2812 | 1.154205 | CGTCATTCCACCGCTCATCC | 61.154 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2448 | 2825 | 2.819595 | CATCCGGGTCGCCACTTG | 60.820 | 66.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2499 | 2876 | 1.666189 | GAAGCCTTACTTCGTGCCATC | 59.334 | 52.381 | 0.00 | 0.00 | 45.16 | 3.51 |
2500 | 2877 | 0.107654 | AGCCTTACTTCGTGCCATCC | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2501 | 2878 | 0.392461 | GCCTTACTTCGTGCCATCCA | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2502 | 2879 | 1.747206 | GCCTTACTTCGTGCCATCCAT | 60.747 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2503 | 2880 | 2.643551 | CCTTACTTCGTGCCATCCATT | 58.356 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2504 | 2881 | 2.355756 | CCTTACTTCGTGCCATCCATTG | 59.644 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
2505 | 2882 | 2.779755 | TACTTCGTGCCATCCATTGT | 57.220 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2506 | 2883 | 1.909700 | ACTTCGTGCCATCCATTGTT | 58.090 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2507 | 2884 | 2.238521 | ACTTCGTGCCATCCATTGTTT | 58.761 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2508 | 2885 | 2.627699 | ACTTCGTGCCATCCATTGTTTT | 59.372 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
2509 | 2886 | 3.069443 | ACTTCGTGCCATCCATTGTTTTT | 59.931 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
2510 | 2887 | 4.279671 | ACTTCGTGCCATCCATTGTTTTTA | 59.720 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
2511 | 2888 | 4.855715 | TCGTGCCATCCATTGTTTTTAA | 57.144 | 36.364 | 0.00 | 0.00 | 0.00 | 1.52 |
2512 | 2889 | 4.804108 | TCGTGCCATCCATTGTTTTTAAG | 58.196 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
2513 | 2890 | 3.925913 | CGTGCCATCCATTGTTTTTAAGG | 59.074 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
2514 | 2891 | 3.684305 | GTGCCATCCATTGTTTTTAAGGC | 59.316 | 43.478 | 0.00 | 0.00 | 39.95 | 4.35 |
2515 | 2892 | 2.929398 | GCCATCCATTGTTTTTAAGGCG | 59.071 | 45.455 | 0.00 | 0.00 | 0.00 | 5.52 |
2516 | 2893 | 3.616317 | GCCATCCATTGTTTTTAAGGCGT | 60.616 | 43.478 | 0.00 | 0.00 | 0.00 | 5.68 |
2517 | 2894 | 4.173256 | CCATCCATTGTTTTTAAGGCGTC | 58.827 | 43.478 | 0.00 | 0.00 | 0.00 | 5.19 |
2518 | 2895 | 3.926821 | TCCATTGTTTTTAAGGCGTCC | 57.073 | 42.857 | 0.00 | 0.00 | 0.00 | 4.79 |
2519 | 2896 | 3.492337 | TCCATTGTTTTTAAGGCGTCCT | 58.508 | 40.909 | 0.00 | 0.00 | 33.87 | 3.85 |
2520 | 2897 | 3.254657 | TCCATTGTTTTTAAGGCGTCCTG | 59.745 | 43.478 | 0.00 | 0.00 | 32.13 | 3.86 |
2521 | 2898 | 2.785713 | TTGTTTTTAAGGCGTCCTGC | 57.214 | 45.000 | 0.00 | 0.00 | 45.38 | 4.85 |
2532 | 2909 | 2.032681 | GTCCTGCCTTGGACGCTT | 59.967 | 61.111 | 5.14 | 0.00 | 45.69 | 4.68 |
2533 | 2910 | 1.295423 | GTCCTGCCTTGGACGCTTA | 59.705 | 57.895 | 5.14 | 0.00 | 45.69 | 3.09 |
2534 | 2911 | 0.741221 | GTCCTGCCTTGGACGCTTAG | 60.741 | 60.000 | 5.14 | 0.00 | 45.69 | 2.18 |
2535 | 2912 | 1.450312 | CCTGCCTTGGACGCTTAGG | 60.450 | 63.158 | 0.00 | 0.00 | 0.00 | 2.69 |
2569 | 2946 | 2.405892 | GGCAGCGCCTTACAAATATG | 57.594 | 50.000 | 2.29 | 0.00 | 46.69 | 1.78 |
2570 | 2947 | 1.600413 | GGCAGCGCCTTACAAATATGC | 60.600 | 52.381 | 2.29 | 2.54 | 46.69 | 3.14 |
2571 | 2948 | 1.600413 | GCAGCGCCTTACAAATATGCC | 60.600 | 52.381 | 2.29 | 0.00 | 0.00 | 4.40 |
2572 | 2949 | 1.001378 | CAGCGCCTTACAAATATGCCC | 60.001 | 52.381 | 2.29 | 0.00 | 0.00 | 5.36 |
2573 | 2950 | 0.040425 | GCGCCTTACAAATATGCCCG | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2574 | 2951 | 0.040425 | CGCCTTACAAATATGCCCGC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2575 | 2952 | 0.313987 | GCCTTACAAATATGCCCGCC | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2576 | 2953 | 1.981256 | CCTTACAAATATGCCCGCCT | 58.019 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2577 | 2954 | 2.306847 | CCTTACAAATATGCCCGCCTT | 58.693 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2578 | 2955 | 3.482436 | CCTTACAAATATGCCCGCCTTA | 58.518 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2579 | 2956 | 3.502211 | CCTTACAAATATGCCCGCCTTAG | 59.498 | 47.826 | 0.00 | 0.00 | 0.00 | 2.18 |
2580 | 2957 | 4.385825 | CTTACAAATATGCCCGCCTTAGA | 58.614 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
2581 | 2958 | 2.572290 | ACAAATATGCCCGCCTTAGAC | 58.428 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
2582 | 2959 | 1.531149 | CAAATATGCCCGCCTTAGACG | 59.469 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
2583 | 2960 | 0.602905 | AATATGCCCGCCTTAGACGC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2584 | 2961 | 1.472662 | ATATGCCCGCCTTAGACGCT | 61.473 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
2585 | 2962 | 1.682451 | TATGCCCGCCTTAGACGCTT | 61.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
2586 | 2963 | 1.682451 | ATGCCCGCCTTAGACGCTTA | 61.682 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
2587 | 2964 | 1.591863 | GCCCGCCTTAGACGCTTAG | 60.592 | 63.158 | 0.00 | 0.00 | 0.00 | 2.18 |
2588 | 2965 | 1.067582 | CCCGCCTTAGACGCTTAGG | 59.932 | 63.158 | 7.32 | 7.32 | 33.87 | 2.69 |
2625 | 3002 | 4.077184 | CGGGTGGTGCTCGCCTTA | 62.077 | 66.667 | 9.43 | 0.00 | 45.18 | 2.69 |
2626 | 3003 | 2.125106 | GGGTGGTGCTCGCCTTAG | 60.125 | 66.667 | 9.43 | 0.00 | 45.18 | 2.18 |
2627 | 3004 | 2.125106 | GGTGGTGCTCGCCTTAGG | 60.125 | 66.667 | 0.00 | 0.00 | 42.62 | 2.69 |
2628 | 3005 | 2.663196 | GTGGTGCTCGCCTTAGGT | 59.337 | 61.111 | 0.00 | 0.00 | 0.00 | 3.08 |
2629 | 3006 | 1.448013 | GTGGTGCTCGCCTTAGGTC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
2630 | 3007 | 1.609501 | TGGTGCTCGCCTTAGGTCT | 60.610 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
2631 | 3008 | 1.142097 | GGTGCTCGCCTTAGGTCTC | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
2632 | 3009 | 1.142097 | GTGCTCGCCTTAGGTCTCC | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
2633 | 3010 | 1.000486 | TGCTCGCCTTAGGTCTCCT | 60.000 | 57.895 | 0.00 | 0.00 | 37.71 | 3.69 |
2634 | 3011 | 0.614979 | TGCTCGCCTTAGGTCTCCTT | 60.615 | 55.000 | 0.00 | 0.00 | 34.61 | 3.36 |
2635 | 3012 | 0.179097 | GCTCGCCTTAGGTCTCCTTG | 60.179 | 60.000 | 0.00 | 0.00 | 34.61 | 3.61 |
2636 | 3013 | 0.179097 | CTCGCCTTAGGTCTCCTTGC | 60.179 | 60.000 | 0.00 | 0.00 | 34.61 | 4.01 |
2637 | 3014 | 1.153349 | CGCCTTAGGTCTCCTTGCC | 60.153 | 63.158 | 0.00 | 0.00 | 34.61 | 4.52 |
2638 | 3015 | 1.153349 | GCCTTAGGTCTCCTTGCCG | 60.153 | 63.158 | 0.00 | 0.00 | 34.61 | 5.69 |
2639 | 3016 | 1.153349 | CCTTAGGTCTCCTTGCCGC | 60.153 | 63.158 | 0.00 | 0.00 | 34.61 | 6.53 |
2640 | 3017 | 1.153349 | CTTAGGTCTCCTTGCCGCC | 60.153 | 63.158 | 0.00 | 0.00 | 34.61 | 6.13 |
2641 | 3018 | 1.612442 | TTAGGTCTCCTTGCCGCCT | 60.612 | 57.895 | 0.00 | 0.00 | 34.61 | 5.52 |
2642 | 3019 | 1.198759 | TTAGGTCTCCTTGCCGCCTT | 61.199 | 55.000 | 0.00 | 0.00 | 34.61 | 4.35 |
2643 | 3020 | 0.324923 | TAGGTCTCCTTGCCGCCTTA | 60.325 | 55.000 | 0.00 | 0.00 | 34.61 | 2.69 |
2644 | 3021 | 1.198759 | AGGTCTCCTTGCCGCCTTAA | 61.199 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2645 | 3022 | 0.322187 | GGTCTCCTTGCCGCCTTAAA | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2646 | 3023 | 1.530323 | GTCTCCTTGCCGCCTTAAAA | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2647 | 3024 | 1.883926 | GTCTCCTTGCCGCCTTAAAAA | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
2648 | 3025 | 1.883926 | TCTCCTTGCCGCCTTAAAAAC | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
2649 | 3026 | 1.611491 | CTCCTTGCCGCCTTAAAAACA | 59.389 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2650 | 3027 | 2.032620 | TCCTTGCCGCCTTAAAAACAA | 58.967 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2651 | 3028 | 2.630580 | TCCTTGCCGCCTTAAAAACAAT | 59.369 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
2652 | 3029 | 2.736192 | CCTTGCCGCCTTAAAAACAATG | 59.264 | 45.455 | 0.00 | 0.00 | 0.00 | 2.82 |
2653 | 3030 | 2.447244 | TGCCGCCTTAAAAACAATGG | 57.553 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2654 | 3031 | 1.689273 | TGCCGCCTTAAAAACAATGGT | 59.311 | 42.857 | 0.00 | 0.00 | 0.00 | 3.55 |
2655 | 3032 | 2.065512 | GCCGCCTTAAAAACAATGGTG | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
2656 | 3033 | 2.065512 | CCGCCTTAAAAACAATGGTGC | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
2657 | 3034 | 2.065512 | CGCCTTAAAAACAATGGTGCC | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
2658 | 3035 | 2.546795 | CGCCTTAAAAACAATGGTGCCA | 60.547 | 45.455 | 0.00 | 0.00 | 0.00 | 4.92 |
2659 | 3036 | 3.673902 | GCCTTAAAAACAATGGTGCCAT | 58.326 | 40.909 | 0.00 | 0.00 | 38.46 | 4.40 |
2768 | 3145 | 5.163632 | TGTGCCTGCAGTTATTGTGATATTG | 60.164 | 40.000 | 13.81 | 0.00 | 0.00 | 1.90 |
2970 | 3347 | 3.188011 | GCCTTTGCCCGCTAGAAC | 58.812 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
3110 | 3487 | 6.870971 | TTATTGGACAAGTGTAAACTGACC | 57.129 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
3174 | 3551 | 5.261209 | TCCCATACATTATTTGCACAAGC | 57.739 | 39.130 | 0.00 | 0.00 | 42.57 | 4.01 |
3201 | 3578 | 2.556622 | AGGCGGATGTAAAGTTGTTTGG | 59.443 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
3292 | 3669 | 4.093998 | AGAAATGATGACGTCTGACATTGC | 59.906 | 41.667 | 23.99 | 22.78 | 32.66 | 3.56 |
3371 | 3748 | 5.664006 | ACATACCATACTAAGTGTTGGGCTA | 59.336 | 40.000 | 0.00 | 0.00 | 33.85 | 3.93 |
3372 | 3749 | 6.329197 | ACATACCATACTAAGTGTTGGGCTAT | 59.671 | 38.462 | 0.00 | 0.00 | 33.85 | 2.97 |
3445 | 3822 | 2.043953 | GAATGCCCCCACTCCACC | 60.044 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3525 | 4191 | 6.503524 | TGGTTTCTCTTGATGTTTTTGCTAC | 58.496 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3562 | 4228 | 7.509141 | TGTGCAAATTCTTGTCTTCTGATTA | 57.491 | 32.000 | 0.00 | 0.00 | 34.79 | 1.75 |
3641 | 4307 | 3.313012 | ACGTCATGTCAATCTTTCGGA | 57.687 | 42.857 | 0.00 | 0.00 | 0.00 | 4.55 |
4092 | 4761 | 9.657121 | GTCTAATATTTCTTAACAATGCTCTGC | 57.343 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
4378 | 5047 | 0.602562 | ACGGCAACAAATGTGGATGG | 59.397 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4813 | 5612 | 6.056236 | GGTTCACTAGTAGATTTGGGGATTC | 58.944 | 44.000 | 3.59 | 0.00 | 0.00 | 2.52 |
4851 | 5650 | 1.142870 | TGCTAGTTGTTTGGTGCTCCT | 59.857 | 47.619 | 6.34 | 0.00 | 34.23 | 3.69 |
5108 | 5915 | 2.167281 | AGCATCATATAGGTAGGCTGCG | 59.833 | 50.000 | 0.00 | 0.00 | 38.39 | 5.18 |
5117 | 5924 | 0.319641 | GGTAGGCTGCGCTGTATACC | 60.320 | 60.000 | 23.64 | 23.64 | 0.00 | 2.73 |
5190 | 5997 | 6.036300 | TGTCTTAGTCCAACAAACAAGTAACG | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
5252 | 6059 | 2.183478 | TGGTACCATCACTGTTGCAG | 57.817 | 50.000 | 11.60 | 0.00 | 37.52 | 4.41 |
5262 | 6069 | 2.072298 | CACTGTTGCAGAAGGTCTAGC | 58.928 | 52.381 | 2.91 | 0.00 | 35.18 | 3.42 |
5305 | 6112 | 4.335037 | GGTTTCAAATGCCAACACAACAAT | 59.665 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
5311 | 6118 | 0.387565 | GCCAACACAACAATCGGGTT | 59.612 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
5320 | 6127 | 4.070009 | ACAACAATCGGGTTCCTTAGTTC | 58.930 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
5391 | 6198 | 6.039616 | TGTGATAAAAACTGCAACTTCCAAC | 58.960 | 36.000 | 0.00 | 0.00 | 0.00 | 3.77 |
5392 | 6199 | 6.127479 | TGTGATAAAAACTGCAACTTCCAACT | 60.127 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
5405 | 6212 | 8.855110 | TGCAACTTCCAACTTCAAGATTATTTA | 58.145 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
5428 | 6235 | 4.755411 | TCACTAAGTGCCATGCTTACTAC | 58.245 | 43.478 | 0.00 | 0.00 | 32.98 | 2.73 |
5429 | 6236 | 3.551890 | CACTAAGTGCCATGCTTACTACG | 59.448 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
5430 | 6237 | 2.762535 | AAGTGCCATGCTTACTACGT | 57.237 | 45.000 | 0.00 | 0.00 | 0.00 | 3.57 |
5431 | 6238 | 3.880047 | AAGTGCCATGCTTACTACGTA | 57.120 | 42.857 | 0.00 | 0.00 | 0.00 | 3.57 |
5443 | 6250 | 6.356556 | TGCTTACTACGTAGATAGTGGGTAA | 58.643 | 40.000 | 28.74 | 13.28 | 36.09 | 2.85 |
5502 | 6309 | 3.742640 | GCCATTTGTGCTTTTGGTTGGTA | 60.743 | 43.478 | 0.00 | 0.00 | 0.00 | 3.25 |
5572 | 6379 | 5.682422 | CGTACCATGATGTGCATATTTGTTG | 59.318 | 40.000 | 0.00 | 0.00 | 34.82 | 3.33 |
5586 | 6393 | 6.672836 | GCATATTTGTTGTTTGTTGCTATGCC | 60.673 | 38.462 | 0.00 | 0.00 | 35.22 | 4.40 |
5838 | 6645 | 3.197790 | CATTGCCTCCTGCGACGG | 61.198 | 66.667 | 0.00 | 0.00 | 45.60 | 4.79 |
5856 | 6663 | 0.935898 | GGCTGCGAAGACAGATCATG | 59.064 | 55.000 | 0.00 | 0.00 | 40.25 | 3.07 |
5939 | 6764 | 2.214376 | ACATTTCTTCCCGGAATGCA | 57.786 | 45.000 | 0.73 | 0.00 | 0.00 | 3.96 |
5957 | 6782 | 1.676014 | GCAGTAGGCGTGATCCAAGTT | 60.676 | 52.381 | 0.00 | 0.00 | 0.00 | 2.66 |
6120 | 6962 | 1.403814 | CTCCGTCCTAGCCATCTGAA | 58.596 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6127 | 6969 | 4.517285 | GTCCTAGCCATCTGAATTGTTGA | 58.483 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
6286 | 7140 | 9.829507 | CATGTTATCACTAGAGAAAGAAAGGAT | 57.170 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
6319 | 7173 | 7.092668 | GGAATGGAGGCAAGATATAATACTCCT | 60.093 | 40.741 | 0.00 | 0.00 | 42.60 | 3.69 |
6326 | 7180 | 6.071278 | GGCAAGATATAATACTCCTTCCGTCT | 60.071 | 42.308 | 0.00 | 0.00 | 0.00 | 4.18 |
6327 | 7181 | 6.809196 | GCAAGATATAATACTCCTTCCGTCTG | 59.191 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
6328 | 7182 | 7.316640 | CAAGATATAATACTCCTTCCGTCTGG | 58.683 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
6341 | 7195 | 4.610605 | TCCGTCTGGAAATACTTGTTGA | 57.389 | 40.909 | 0.00 | 0.00 | 42.85 | 3.18 |
6343 | 7197 | 4.994852 | TCCGTCTGGAAATACTTGTTGAAG | 59.005 | 41.667 | 0.00 | 0.00 | 42.85 | 3.02 |
6344 | 7198 | 4.994852 | CCGTCTGGAAATACTTGTTGAAGA | 59.005 | 41.667 | 0.00 | 0.00 | 37.49 | 2.87 |
6345 | 7199 | 5.468746 | CCGTCTGGAAATACTTGTTGAAGAA | 59.531 | 40.000 | 0.00 | 0.00 | 37.49 | 2.52 |
6349 | 7203 | 8.023706 | GTCTGGAAATACTTGTTGAAGAATTCC | 58.976 | 37.037 | 0.65 | 0.00 | 46.93 | 3.01 |
6350 | 7204 | 7.944554 | TCTGGAAATACTTGTTGAAGAATTCCT | 59.055 | 33.333 | 0.65 | 0.00 | 46.93 | 3.36 |
6351 | 7205 | 8.110860 | TGGAAATACTTGTTGAAGAATTCCTC | 57.889 | 34.615 | 0.65 | 0.00 | 46.93 | 3.71 |
6352 | 7206 | 7.176690 | TGGAAATACTTGTTGAAGAATTCCTCC | 59.823 | 37.037 | 0.65 | 0.00 | 46.93 | 4.30 |
6353 | 7207 | 6.743575 | AATACTTGTTGAAGAATTCCTCCG | 57.256 | 37.500 | 0.65 | 0.00 | 46.93 | 4.63 |
6354 | 7208 | 4.351874 | ACTTGTTGAAGAATTCCTCCGA | 57.648 | 40.909 | 0.65 | 0.00 | 46.93 | 4.55 |
6355 | 7209 | 4.065789 | ACTTGTTGAAGAATTCCTCCGAC | 58.934 | 43.478 | 0.65 | 1.73 | 46.93 | 4.79 |
6356 | 7210 | 3.762407 | TGTTGAAGAATTCCTCCGACA | 57.238 | 42.857 | 0.65 | 4.29 | 46.93 | 4.35 |
6357 | 7211 | 4.079980 | TGTTGAAGAATTCCTCCGACAA | 57.920 | 40.909 | 0.65 | 0.00 | 46.93 | 3.18 |
6358 | 7212 | 4.065088 | TGTTGAAGAATTCCTCCGACAAG | 58.935 | 43.478 | 0.65 | 0.00 | 46.93 | 3.16 |
6359 | 7213 | 4.065789 | GTTGAAGAATTCCTCCGACAAGT | 58.934 | 43.478 | 0.65 | 0.00 | 46.93 | 3.16 |
6361 | 7215 | 5.677319 | TGAAGAATTCCTCCGACAAGTAT | 57.323 | 39.130 | 0.65 | 0.00 | 46.93 | 2.12 |
6362 | 7216 | 6.049955 | TGAAGAATTCCTCCGACAAGTATT | 57.950 | 37.500 | 0.65 | 0.00 | 46.93 | 1.89 |
6363 | 7217 | 6.472887 | TGAAGAATTCCTCCGACAAGTATTT | 58.527 | 36.000 | 0.65 | 0.00 | 46.93 | 1.40 |
6364 | 7218 | 6.594159 | TGAAGAATTCCTCCGACAAGTATTTC | 59.406 | 38.462 | 0.65 | 0.00 | 46.93 | 2.17 |
6365 | 7219 | 5.429130 | AGAATTCCTCCGACAAGTATTTCC | 58.571 | 41.667 | 0.65 | 0.00 | 0.00 | 3.13 |
6366 | 7220 | 4.837093 | ATTCCTCCGACAAGTATTTCCA | 57.163 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
6367 | 7221 | 3.887621 | TCCTCCGACAAGTATTTCCAG | 57.112 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
6369 | 7223 | 2.236395 | CCTCCGACAAGTATTTCCAGGT | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6374 | 7243 | 3.306780 | CGACAAGTATTTCCAGGTGGAGT | 60.307 | 47.826 | 0.00 | 0.00 | 46.36 | 3.85 |
6375 | 7244 | 4.081862 | CGACAAGTATTTCCAGGTGGAGTA | 60.082 | 45.833 | 0.00 | 0.00 | 46.36 | 2.59 |
6376 | 7245 | 5.420409 | GACAAGTATTTCCAGGTGGAGTAG | 58.580 | 45.833 | 0.00 | 0.00 | 46.36 | 2.57 |
6380 | 7249 | 4.961099 | AGTATTTCCAGGTGGAGTAGGTAC | 59.039 | 45.833 | 0.00 | 0.85 | 46.36 | 3.34 |
6382 | 7251 | 0.033796 | TCCAGGTGGAGTAGGTACGG | 60.034 | 60.000 | 0.00 | 0.00 | 39.78 | 4.02 |
6391 | 7260 | 2.805099 | GGAGTAGGTACGGACTATCGTG | 59.195 | 54.545 | 0.00 | 0.00 | 43.70 | 4.35 |
6403 | 7272 | 6.570692 | ACGGACTATCGTGAATAGAATGTTT | 58.429 | 36.000 | 0.00 | 0.00 | 42.21 | 2.83 |
6404 | 7273 | 6.475727 | ACGGACTATCGTGAATAGAATGTTTG | 59.524 | 38.462 | 0.00 | 0.00 | 42.21 | 2.93 |
6405 | 7274 | 6.475727 | CGGACTATCGTGAATAGAATGTTTGT | 59.524 | 38.462 | 0.00 | 0.00 | 39.94 | 2.83 |
6407 | 7276 | 9.309516 | GGACTATCGTGAATAGAATGTTTGTAA | 57.690 | 33.333 | 0.00 | 0.00 | 39.94 | 2.41 |
6411 | 7280 | 7.915293 | TCGTGAATAGAATGTTTGTAATGGT | 57.085 | 32.000 | 0.00 | 0.00 | 0.00 | 3.55 |
6412 | 7281 | 7.747888 | TCGTGAATAGAATGTTTGTAATGGTG | 58.252 | 34.615 | 0.00 | 0.00 | 0.00 | 4.17 |
6413 | 7282 | 6.468956 | CGTGAATAGAATGTTTGTAATGGTGC | 59.531 | 38.462 | 0.00 | 0.00 | 0.00 | 5.01 |
6529 | 7513 | 5.464030 | TTTTTGTCGGCTAGAGAAGTACT | 57.536 | 39.130 | 0.00 | 0.00 | 33.44 | 2.73 |
6531 | 7515 | 2.641305 | TGTCGGCTAGAGAAGTACTCC | 58.359 | 52.381 | 0.00 | 0.00 | 45.96 | 3.85 |
6532 | 7516 | 1.948834 | GTCGGCTAGAGAAGTACTCCC | 59.051 | 57.143 | 0.00 | 0.00 | 45.96 | 4.30 |
6533 | 7517 | 1.845143 | TCGGCTAGAGAAGTACTCCCT | 59.155 | 52.381 | 0.00 | 0.00 | 45.96 | 4.20 |
6534 | 7518 | 2.158784 | TCGGCTAGAGAAGTACTCCCTC | 60.159 | 54.545 | 14.19 | 14.19 | 45.96 | 4.30 |
6536 | 7520 | 3.219281 | GGCTAGAGAAGTACTCCCTCTG | 58.781 | 54.545 | 25.89 | 19.35 | 45.96 | 3.35 |
6537 | 7521 | 3.372241 | GGCTAGAGAAGTACTCCCTCTGT | 60.372 | 52.174 | 25.89 | 14.74 | 45.96 | 3.41 |
6538 | 7522 | 4.274978 | GCTAGAGAAGTACTCCCTCTGTT | 58.725 | 47.826 | 25.89 | 11.65 | 45.96 | 3.16 |
6539 | 7523 | 4.337274 | GCTAGAGAAGTACTCCCTCTGTTC | 59.663 | 50.000 | 25.89 | 15.98 | 45.96 | 3.18 |
6540 | 7524 | 3.703921 | AGAGAAGTACTCCCTCTGTTCC | 58.296 | 50.000 | 20.55 | 0.84 | 45.96 | 3.62 |
6541 | 7525 | 3.076182 | AGAGAAGTACTCCCTCTGTTCCA | 59.924 | 47.826 | 20.55 | 0.00 | 45.96 | 3.53 |
6542 | 7526 | 3.833070 | GAGAAGTACTCCCTCTGTTCCAA | 59.167 | 47.826 | 14.56 | 0.00 | 39.53 | 3.53 |
6543 | 7527 | 4.232091 | AGAAGTACTCCCTCTGTTCCAAA | 58.768 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
6544 | 7528 | 4.658901 | AGAAGTACTCCCTCTGTTCCAAAA | 59.341 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
6545 | 7529 | 5.310857 | AGAAGTACTCCCTCTGTTCCAAAAT | 59.689 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
6546 | 7530 | 6.500751 | AGAAGTACTCCCTCTGTTCCAAAATA | 59.499 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
6547 | 7531 | 6.893020 | AGTACTCCCTCTGTTCCAAAATAT | 57.107 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
6548 | 7532 | 7.989947 | AGTACTCCCTCTGTTCCAAAATATA | 57.010 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
6549 | 7533 | 8.024145 | AGTACTCCCTCTGTTCCAAAATATAG | 57.976 | 38.462 | 0.00 | 0.00 | 0.00 | 1.31 |
6550 | 7534 | 6.893020 | ACTCCCTCTGTTCCAAAATATAGT | 57.107 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
6551 | 7535 | 6.653989 | ACTCCCTCTGTTCCAAAATATAGTG | 58.346 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
6552 | 7536 | 5.437060 | TCCCTCTGTTCCAAAATATAGTGC | 58.563 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
6553 | 7537 | 4.273480 | CCCTCTGTTCCAAAATATAGTGCG | 59.727 | 45.833 | 0.00 | 0.00 | 0.00 | 5.34 |
6554 | 7538 | 4.260784 | CCTCTGTTCCAAAATATAGTGCGC | 60.261 | 45.833 | 0.00 | 0.00 | 0.00 | 6.09 |
6555 | 7539 | 3.625764 | TCTGTTCCAAAATATAGTGCGCC | 59.374 | 43.478 | 4.18 | 0.00 | 0.00 | 6.53 |
6556 | 7540 | 2.685897 | TGTTCCAAAATATAGTGCGCCC | 59.314 | 45.455 | 4.18 | 0.00 | 0.00 | 6.13 |
6557 | 7541 | 1.588674 | TCCAAAATATAGTGCGCCCG | 58.411 | 50.000 | 4.18 | 0.00 | 0.00 | 6.13 |
6558 | 7542 | 0.040425 | CCAAAATATAGTGCGCCCGC | 60.040 | 55.000 | 4.18 | 5.60 | 42.35 | 6.13 |
6559 | 7543 | 0.384230 | CAAAATATAGTGCGCCCGCG | 60.384 | 55.000 | 4.18 | 4.36 | 45.51 | 6.46 |
6571 | 7555 | 3.121030 | CCCGCGCTTTCTGAGGTG | 61.121 | 66.667 | 5.56 | 0.00 | 0.00 | 4.00 |
6572 | 7556 | 3.793144 | CCGCGCTTTCTGAGGTGC | 61.793 | 66.667 | 5.56 | 7.76 | 35.86 | 5.01 |
6573 | 7557 | 3.043713 | CGCGCTTTCTGAGGTGCA | 61.044 | 61.111 | 5.56 | 0.00 | 38.67 | 4.57 |
6574 | 7558 | 2.606961 | CGCGCTTTCTGAGGTGCAA | 61.607 | 57.895 | 5.56 | 0.00 | 38.67 | 4.08 |
6575 | 7559 | 1.081840 | GCGCTTTCTGAGGTGCAAC | 60.082 | 57.895 | 0.00 | 0.00 | 38.62 | 4.17 |
6576 | 7560 | 1.510480 | GCGCTTTCTGAGGTGCAACT | 61.510 | 55.000 | 2.34 | 2.34 | 38.62 | 3.16 |
6577 | 7561 | 0.947244 | CGCTTTCTGAGGTGCAACTT | 59.053 | 50.000 | 5.31 | 0.00 | 36.74 | 2.66 |
6578 | 7562 | 1.334869 | CGCTTTCTGAGGTGCAACTTT | 59.665 | 47.619 | 5.31 | 0.00 | 36.74 | 2.66 |
6579 | 7563 | 2.735823 | GCTTTCTGAGGTGCAACTTTG | 58.264 | 47.619 | 5.31 | 1.59 | 36.74 | 2.77 |
6580 | 7564 | 2.358898 | GCTTTCTGAGGTGCAACTTTGA | 59.641 | 45.455 | 5.31 | 4.43 | 36.74 | 2.69 |
6581 | 7565 | 3.793465 | GCTTTCTGAGGTGCAACTTTGAC | 60.793 | 47.826 | 5.31 | 0.00 | 36.74 | 3.18 |
6582 | 7566 | 1.967319 | TCTGAGGTGCAACTTTGACC | 58.033 | 50.000 | 5.31 | 0.00 | 36.74 | 4.02 |
6583 | 7567 | 1.211703 | TCTGAGGTGCAACTTTGACCA | 59.788 | 47.619 | 5.31 | 0.00 | 36.74 | 4.02 |
6584 | 7568 | 2.158623 | TCTGAGGTGCAACTTTGACCAT | 60.159 | 45.455 | 5.31 | 0.00 | 36.74 | 3.55 |
6585 | 7569 | 3.072330 | TCTGAGGTGCAACTTTGACCATA | 59.928 | 43.478 | 5.31 | 0.00 | 36.74 | 2.74 |
6586 | 7570 | 3.820467 | CTGAGGTGCAACTTTGACCATAA | 59.180 | 43.478 | 5.31 | 0.00 | 36.74 | 1.90 |
6587 | 7571 | 4.211125 | TGAGGTGCAACTTTGACCATAAA | 58.789 | 39.130 | 5.31 | 0.00 | 36.74 | 1.40 |
6588 | 7572 | 4.832266 | TGAGGTGCAACTTTGACCATAAAT | 59.168 | 37.500 | 5.31 | 0.00 | 36.74 | 1.40 |
6589 | 7573 | 5.304101 | TGAGGTGCAACTTTGACCATAAATT | 59.696 | 36.000 | 5.31 | 0.00 | 36.74 | 1.82 |
6590 | 7574 | 6.173427 | AGGTGCAACTTTGACCATAAATTT | 57.827 | 33.333 | 0.00 | 0.00 | 36.74 | 1.82 |
6591 | 7575 | 7.014711 | TGAGGTGCAACTTTGACCATAAATTTA | 59.985 | 33.333 | 5.31 | 0.00 | 36.74 | 1.40 |
6592 | 7576 | 7.731054 | AGGTGCAACTTTGACCATAAATTTAA | 58.269 | 30.769 | 0.00 | 0.00 | 36.74 | 1.52 |
6593 | 7577 | 7.655732 | AGGTGCAACTTTGACCATAAATTTAAC | 59.344 | 33.333 | 0.00 | 0.00 | 36.74 | 2.01 |
6594 | 7578 | 7.095397 | GGTGCAACTTTGACCATAAATTTAACC | 60.095 | 37.037 | 1.21 | 0.00 | 36.74 | 2.85 |
6595 | 7579 | 7.439655 | GTGCAACTTTGACCATAAATTTAACCA | 59.560 | 33.333 | 1.21 | 0.00 | 0.00 | 3.67 |
6596 | 7580 | 7.987458 | TGCAACTTTGACCATAAATTTAACCAA | 59.013 | 29.630 | 1.21 | 2.19 | 0.00 | 3.67 |
6597 | 7581 | 8.279800 | GCAACTTTGACCATAAATTTAACCAAC | 58.720 | 33.333 | 1.21 | 0.00 | 0.00 | 3.77 |
6598 | 7582 | 8.484008 | CAACTTTGACCATAAATTTAACCAACG | 58.516 | 33.333 | 1.21 | 5.06 | 0.00 | 4.10 |
6599 | 7583 | 7.942990 | ACTTTGACCATAAATTTAACCAACGA | 58.057 | 30.769 | 1.21 | 0.00 | 0.00 | 3.85 |
6600 | 7584 | 8.079809 | ACTTTGACCATAAATTTAACCAACGAG | 58.920 | 33.333 | 1.21 | 3.35 | 0.00 | 4.18 |
6601 | 7585 | 7.747155 | TTGACCATAAATTTAACCAACGAGA | 57.253 | 32.000 | 1.21 | 0.00 | 0.00 | 4.04 |
6602 | 7586 | 7.136289 | TGACCATAAATTTAACCAACGAGAC | 57.864 | 36.000 | 1.21 | 0.00 | 0.00 | 3.36 |
6603 | 7587 | 6.149807 | TGACCATAAATTTAACCAACGAGACC | 59.850 | 38.462 | 1.21 | 0.00 | 0.00 | 3.85 |
6604 | 7588 | 6.005198 | ACCATAAATTTAACCAACGAGACCA | 58.995 | 36.000 | 1.21 | 0.00 | 0.00 | 4.02 |
6605 | 7589 | 6.490721 | ACCATAAATTTAACCAACGAGACCAA | 59.509 | 34.615 | 1.21 | 0.00 | 0.00 | 3.67 |
6606 | 7590 | 6.804783 | CCATAAATTTAACCAACGAGACCAAC | 59.195 | 38.462 | 1.21 | 0.00 | 0.00 | 3.77 |
6607 | 7591 | 7.308951 | CCATAAATTTAACCAACGAGACCAACT | 60.309 | 37.037 | 1.21 | 0.00 | 0.00 | 3.16 |
6608 | 7592 | 5.432885 | AATTTAACCAACGAGACCAACTG | 57.567 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
6609 | 7593 | 1.873698 | TAACCAACGAGACCAACTGC | 58.126 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6610 | 7594 | 1.157870 | AACCAACGAGACCAACTGCG | 61.158 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
6611 | 7595 | 2.317609 | CCAACGAGACCAACTGCGG | 61.318 | 63.158 | 0.00 | 0.00 | 0.00 | 5.69 |
6612 | 7596 | 2.665185 | AACGAGACCAACTGCGGC | 60.665 | 61.111 | 0.00 | 0.00 | 0.00 | 6.53 |
6613 | 7597 | 3.454587 | AACGAGACCAACTGCGGCA | 62.455 | 57.895 | 1.29 | 1.29 | 0.00 | 5.69 |
6614 | 7598 | 3.114616 | CGAGACCAACTGCGGCAG | 61.115 | 66.667 | 27.43 | 27.43 | 37.52 | 4.85 |
6615 | 7599 | 2.343758 | GAGACCAACTGCGGCAGA | 59.656 | 61.111 | 34.70 | 0.00 | 35.18 | 4.26 |
6616 | 7600 | 1.301716 | GAGACCAACTGCGGCAGAA | 60.302 | 57.895 | 34.70 | 0.00 | 35.18 | 3.02 |
6617 | 7601 | 1.294659 | GAGACCAACTGCGGCAGAAG | 61.295 | 60.000 | 34.70 | 24.06 | 35.18 | 2.85 |
6618 | 7602 | 1.301716 | GACCAACTGCGGCAGAAGA | 60.302 | 57.895 | 34.70 | 0.00 | 35.18 | 2.87 |
6619 | 7603 | 0.884704 | GACCAACTGCGGCAGAAGAA | 60.885 | 55.000 | 34.70 | 0.00 | 35.18 | 2.52 |
6620 | 7604 | 0.465460 | ACCAACTGCGGCAGAAGAAA | 60.465 | 50.000 | 34.70 | 0.00 | 35.18 | 2.52 |
6621 | 7605 | 0.667993 | CCAACTGCGGCAGAAGAAAA | 59.332 | 50.000 | 34.70 | 0.00 | 35.18 | 2.29 |
6622 | 7606 | 1.066908 | CCAACTGCGGCAGAAGAAAAA | 59.933 | 47.619 | 34.70 | 0.00 | 35.18 | 1.94 |
6662 | 7646 | 9.450807 | AAACTTCTTTCAAATACGAATTCACTG | 57.549 | 29.630 | 6.22 | 0.00 | 0.00 | 3.66 |
6663 | 7647 | 8.378172 | ACTTCTTTCAAATACGAATTCACTGA | 57.622 | 30.769 | 6.22 | 0.00 | 0.00 | 3.41 |
6664 | 7648 | 9.003658 | ACTTCTTTCAAATACGAATTCACTGAT | 57.996 | 29.630 | 6.22 | 0.00 | 0.00 | 2.90 |
6677 | 7661 | 9.722056 | ACGAATTCACTGATATAATTTTTGCTC | 57.278 | 29.630 | 6.22 | 0.00 | 0.00 | 4.26 |
6678 | 7662 | 9.173939 | CGAATTCACTGATATAATTTTTGCTCC | 57.826 | 33.333 | 6.22 | 0.00 | 0.00 | 4.70 |
6679 | 7663 | 9.468532 | GAATTCACTGATATAATTTTTGCTCCC | 57.531 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
6680 | 7664 | 6.618287 | TCACTGATATAATTTTTGCTCCCG | 57.382 | 37.500 | 0.00 | 0.00 | 0.00 | 5.14 |
6681 | 7665 | 5.008613 | TCACTGATATAATTTTTGCTCCCGC | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 6.13 |
6682 | 7666 | 4.278419 | ACTGATATAATTTTTGCTCCCGCC | 59.722 | 41.667 | 0.00 | 0.00 | 34.43 | 6.13 |
6683 | 7667 | 3.252215 | TGATATAATTTTTGCTCCCGCCG | 59.748 | 43.478 | 0.00 | 0.00 | 34.43 | 6.46 |
6684 | 7668 | 0.102300 | ATAATTTTTGCTCCCGCCGC | 59.898 | 50.000 | 0.00 | 0.00 | 34.43 | 6.53 |
6685 | 7669 | 1.244697 | TAATTTTTGCTCCCGCCGCA | 61.245 | 50.000 | 0.00 | 0.00 | 35.22 | 5.69 |
6686 | 7670 | 2.093537 | AATTTTTGCTCCCGCCGCAA | 62.094 | 50.000 | 0.00 | 0.00 | 44.83 | 4.85 |
6687 | 7671 | 1.887344 | ATTTTTGCTCCCGCCGCAAT | 61.887 | 50.000 | 5.33 | 0.00 | 45.67 | 3.56 |
6688 | 7672 | 2.485188 | TTTTTGCTCCCGCCGCAATC | 62.485 | 55.000 | 5.33 | 0.00 | 45.67 | 2.67 |
6704 | 7688 | 5.712217 | CGCAATCGGTCTTGATAGTTAAA | 57.288 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
6705 | 7689 | 6.287107 | CGCAATCGGTCTTGATAGTTAAAT | 57.713 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
6706 | 7690 | 6.715464 | CGCAATCGGTCTTGATAGTTAAATT | 58.285 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
6707 | 7691 | 7.186804 | CGCAATCGGTCTTGATAGTTAAATTT | 58.813 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
6708 | 7692 | 8.332464 | CGCAATCGGTCTTGATAGTTAAATTTA | 58.668 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
6709 | 7693 | 9.434559 | GCAATCGGTCTTGATAGTTAAATTTAC | 57.565 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
6712 | 7696 | 9.886132 | ATCGGTCTTGATAGTTAAATTTACAGT | 57.114 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
6713 | 7697 | 9.362539 | TCGGTCTTGATAGTTAAATTTACAGTC | 57.637 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
6714 | 7698 | 9.146984 | CGGTCTTGATAGTTAAATTTACAGTCA | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
6724 | 7708 | 9.516314 | AGTTAAATTTACAGTCAAAGTTGAAGC | 57.484 | 29.630 | 0.00 | 0.00 | 39.21 | 3.86 |
6725 | 7709 | 9.296400 | GTTAAATTTACAGTCAAAGTTGAAGCA | 57.704 | 29.630 | 0.00 | 0.00 | 39.21 | 3.91 |
6726 | 7710 | 7.755582 | AAATTTACAGTCAAAGTTGAAGCAC | 57.244 | 32.000 | 0.00 | 0.00 | 39.21 | 4.40 |
6727 | 7711 | 4.530094 | TTACAGTCAAAGTTGAAGCACG | 57.470 | 40.909 | 0.00 | 0.00 | 39.21 | 5.34 |
6728 | 7712 | 1.670811 | ACAGTCAAAGTTGAAGCACGG | 59.329 | 47.619 | 0.00 | 0.00 | 39.21 | 4.94 |
6729 | 7713 | 1.939934 | CAGTCAAAGTTGAAGCACGGA | 59.060 | 47.619 | 0.00 | 0.00 | 39.21 | 4.69 |
6730 | 7714 | 2.032549 | CAGTCAAAGTTGAAGCACGGAG | 60.033 | 50.000 | 0.00 | 0.00 | 39.21 | 4.63 |
6731 | 7715 | 2.158957 | AGTCAAAGTTGAAGCACGGAGA | 60.159 | 45.455 | 0.00 | 0.00 | 39.21 | 3.71 |
6732 | 7716 | 2.808543 | GTCAAAGTTGAAGCACGGAGAT | 59.191 | 45.455 | 0.00 | 0.00 | 39.21 | 2.75 |
6733 | 7717 | 3.994392 | GTCAAAGTTGAAGCACGGAGATA | 59.006 | 43.478 | 0.00 | 0.00 | 39.21 | 1.98 |
6734 | 7718 | 4.092091 | GTCAAAGTTGAAGCACGGAGATAG | 59.908 | 45.833 | 0.00 | 0.00 | 39.21 | 2.08 |
6735 | 7719 | 4.021456 | TCAAAGTTGAAGCACGGAGATAGA | 60.021 | 41.667 | 0.00 | 0.00 | 33.55 | 1.98 |
6736 | 7720 | 4.744795 | AAGTTGAAGCACGGAGATAGAT | 57.255 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
6737 | 7721 | 4.052159 | AGTTGAAGCACGGAGATAGATG | 57.948 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
6738 | 7722 | 3.701542 | AGTTGAAGCACGGAGATAGATGA | 59.298 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
6739 | 7723 | 4.160439 | AGTTGAAGCACGGAGATAGATGAA | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
6740 | 7724 | 4.313277 | TGAAGCACGGAGATAGATGAAG | 57.687 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
6741 | 7725 | 2.810439 | AGCACGGAGATAGATGAAGC | 57.190 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6742 | 7726 | 2.034878 | AGCACGGAGATAGATGAAGCA | 58.965 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
6743 | 7727 | 2.131183 | GCACGGAGATAGATGAAGCAC | 58.869 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
6744 | 7728 | 2.223923 | GCACGGAGATAGATGAAGCACT | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6745 | 7729 | 3.004839 | GCACGGAGATAGATGAAGCACTA | 59.995 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
6746 | 7730 | 4.541779 | CACGGAGATAGATGAAGCACTAC | 58.458 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
6747 | 7731 | 4.036852 | CACGGAGATAGATGAAGCACTACA | 59.963 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
6748 | 7732 | 4.830046 | ACGGAGATAGATGAAGCACTACAT | 59.170 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
6749 | 7733 | 5.303078 | ACGGAGATAGATGAAGCACTACATT | 59.697 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
6750 | 7734 | 5.632764 | CGGAGATAGATGAAGCACTACATTG | 59.367 | 44.000 | 0.00 | 0.00 | 0.00 | 2.82 |
6751 | 7735 | 6.520272 | GGAGATAGATGAAGCACTACATTGT | 58.480 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
6752 | 7736 | 7.522236 | CGGAGATAGATGAAGCACTACATTGTA | 60.522 | 40.741 | 0.00 | 0.00 | 0.00 | 2.41 |
6753 | 7737 | 7.812191 | GGAGATAGATGAAGCACTACATTGTAG | 59.188 | 40.741 | 19.90 | 19.90 | 0.00 | 2.74 |
6754 | 7738 | 8.470657 | AGATAGATGAAGCACTACATTGTAGA | 57.529 | 34.615 | 26.58 | 6.93 | 0.00 | 2.59 |
6755 | 7739 | 8.918116 | AGATAGATGAAGCACTACATTGTAGAA | 58.082 | 33.333 | 26.58 | 8.17 | 0.00 | 2.10 |
6756 | 7740 | 9.703892 | GATAGATGAAGCACTACATTGTAGAAT | 57.296 | 33.333 | 26.58 | 11.31 | 0.00 | 2.40 |
6757 | 7741 | 7.783090 | AGATGAAGCACTACATTGTAGAATG | 57.217 | 36.000 | 26.58 | 17.30 | 44.11 | 2.67 |
6758 | 7742 | 6.765036 | AGATGAAGCACTACATTGTAGAATGG | 59.235 | 38.462 | 26.58 | 14.82 | 43.00 | 3.16 |
6759 | 7743 | 6.048732 | TGAAGCACTACATTGTAGAATGGA | 57.951 | 37.500 | 26.58 | 7.42 | 43.00 | 3.41 |
6768 | 7752 | 6.620877 | ACATTGTAGAATGGAGGAAGTACA | 57.379 | 37.500 | 16.24 | 0.00 | 43.00 | 2.90 |
6769 | 7753 | 6.407202 | ACATTGTAGAATGGAGGAAGTACAC | 58.593 | 40.000 | 16.24 | 0.00 | 43.00 | 2.90 |
6770 | 7754 | 6.213600 | ACATTGTAGAATGGAGGAAGTACACT | 59.786 | 38.462 | 16.24 | 0.00 | 43.00 | 3.55 |
6771 | 7755 | 7.399191 | ACATTGTAGAATGGAGGAAGTACACTA | 59.601 | 37.037 | 16.24 | 0.00 | 43.00 | 2.74 |
6772 | 7756 | 6.770746 | TGTAGAATGGAGGAAGTACACTAC | 57.229 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
6773 | 7757 | 6.491383 | TGTAGAATGGAGGAAGTACACTACT | 58.509 | 40.000 | 0.00 | 0.00 | 41.73 | 2.57 |
6833 | 8464 | 4.109766 | GTCCTGCACAAACAAAAACCTAC | 58.890 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
6839 | 8470 | 5.067413 | TGCACAAACAAAAACCTACGGAATA | 59.933 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
6871 | 8519 | 6.313252 | TGAACAAAAGCAAAAGCAAACAATC | 58.687 | 32.000 | 0.00 | 0.00 | 0.00 | 2.67 |
6878 | 8526 | 3.245990 | GCAAAAGCAAACAATCAGTGGTC | 59.754 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
6881 | 8529 | 1.133513 | AGCAAACAATCAGTGGTCCCA | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
6884 | 8532 | 3.156293 | CAAACAATCAGTGGTCCCATCA | 58.844 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
6894 | 8542 | 1.839994 | TGGTCCCATCAAGCCTCTAAG | 59.160 | 52.381 | 0.00 | 0.00 | 0.00 | 2.18 |
6895 | 8543 | 1.141858 | GGTCCCATCAAGCCTCTAAGG | 59.858 | 57.143 | 0.00 | 0.00 | 38.80 | 2.69 |
6907 | 8555 | 3.742433 | CCTCTAAGGCTGGTCATAGTG | 57.258 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
6908 | 8556 | 2.366916 | CCTCTAAGGCTGGTCATAGTGG | 59.633 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
6909 | 8557 | 2.366916 | CTCTAAGGCTGGTCATAGTGGG | 59.633 | 54.545 | 0.00 | 0.00 | 0.00 | 4.61 |
6910 | 8558 | 1.417890 | CTAAGGCTGGTCATAGTGGGG | 59.582 | 57.143 | 0.00 | 0.00 | 0.00 | 4.96 |
6911 | 8559 | 0.253160 | AAGGCTGGTCATAGTGGGGA | 60.253 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
6912 | 8560 | 0.692419 | AGGCTGGTCATAGTGGGGAG | 60.692 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6913 | 8561 | 0.983378 | GGCTGGTCATAGTGGGGAGT | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6914 | 8562 | 1.691482 | GGCTGGTCATAGTGGGGAGTA | 60.691 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
6915 | 8563 | 2.116238 | GCTGGTCATAGTGGGGAGTAA | 58.884 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
6916 | 8564 | 2.158943 | GCTGGTCATAGTGGGGAGTAAC | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 2.50 |
6917 | 8565 | 3.375699 | CTGGTCATAGTGGGGAGTAACT | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
6918 | 8566 | 3.371965 | TGGTCATAGTGGGGAGTAACTC | 58.628 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6919 | 8567 | 3.245839 | TGGTCATAGTGGGGAGTAACTCA | 60.246 | 47.826 | 0.00 | 0.00 | 31.08 | 3.41 |
6920 | 8568 | 3.385111 | GGTCATAGTGGGGAGTAACTCAG | 59.615 | 52.174 | 0.00 | 0.00 | 31.08 | 3.35 |
6921 | 8569 | 4.279145 | GTCATAGTGGGGAGTAACTCAGA | 58.721 | 47.826 | 0.00 | 0.00 | 31.08 | 3.27 |
6922 | 8570 | 4.098196 | GTCATAGTGGGGAGTAACTCAGAC | 59.902 | 50.000 | 0.00 | 0.00 | 31.08 | 3.51 |
6923 | 8571 | 4.017407 | TCATAGTGGGGAGTAACTCAGACT | 60.017 | 45.833 | 0.00 | 0.00 | 31.08 | 3.24 |
6924 | 8572 | 5.193124 | TCATAGTGGGGAGTAACTCAGACTA | 59.807 | 44.000 | 0.00 | 0.00 | 31.08 | 2.59 |
6925 | 8573 | 3.970842 | AGTGGGGAGTAACTCAGACTAG | 58.029 | 50.000 | 0.00 | 0.00 | 31.08 | 2.57 |
6926 | 8574 | 3.334280 | AGTGGGGAGTAACTCAGACTAGT | 59.666 | 47.826 | 0.00 | 0.00 | 31.08 | 2.57 |
6927 | 8575 | 3.444388 | GTGGGGAGTAACTCAGACTAGTG | 59.556 | 52.174 | 0.00 | 0.00 | 31.08 | 2.74 |
6928 | 8576 | 3.075582 | TGGGGAGTAACTCAGACTAGTGT | 59.924 | 47.826 | 0.00 | 0.00 | 31.08 | 3.55 |
6929 | 8577 | 3.695556 | GGGGAGTAACTCAGACTAGTGTC | 59.304 | 52.174 | 0.00 | 0.00 | 43.22 | 3.67 |
6930 | 8578 | 4.333690 | GGGAGTAACTCAGACTAGTGTCA | 58.666 | 47.826 | 0.00 | 0.00 | 45.20 | 3.58 |
6931 | 8579 | 4.951094 | GGGAGTAACTCAGACTAGTGTCAT | 59.049 | 45.833 | 0.00 | 0.00 | 45.20 | 3.06 |
6932 | 8580 | 5.163602 | GGGAGTAACTCAGACTAGTGTCATG | 60.164 | 48.000 | 0.00 | 0.00 | 45.20 | 3.07 |
6933 | 8581 | 5.416326 | GGAGTAACTCAGACTAGTGTCATGT | 59.584 | 44.000 | 0.00 | 0.00 | 45.20 | 3.21 |
6934 | 8582 | 6.598457 | GGAGTAACTCAGACTAGTGTCATGTA | 59.402 | 42.308 | 0.00 | 0.00 | 45.20 | 2.29 |
6935 | 8583 | 7.283580 | GGAGTAACTCAGACTAGTGTCATGTAT | 59.716 | 40.741 | 0.00 | 0.00 | 45.20 | 2.29 |
6936 | 8584 | 9.327628 | GAGTAACTCAGACTAGTGTCATGTATA | 57.672 | 37.037 | 0.00 | 0.00 | 45.20 | 1.47 |
6937 | 8585 | 9.854668 | AGTAACTCAGACTAGTGTCATGTATAT | 57.145 | 33.333 | 0.00 | 0.00 | 45.20 | 0.86 |
6938 | 8586 | 9.885934 | GTAACTCAGACTAGTGTCATGTATATG | 57.114 | 37.037 | 0.00 | 0.00 | 45.20 | 1.78 |
6939 | 8587 | 8.753497 | AACTCAGACTAGTGTCATGTATATGA | 57.247 | 34.615 | 0.00 | 0.00 | 45.20 | 2.15 |
6960 | 8608 | 7.957992 | ATGACACTAGCTTAAGTTACTACCT | 57.042 | 36.000 | 4.02 | 0.00 | 0.00 | 3.08 |
6961 | 8609 | 7.771927 | TGACACTAGCTTAAGTTACTACCTT | 57.228 | 36.000 | 4.02 | 0.00 | 0.00 | 3.50 |
6962 | 8610 | 7.824672 | TGACACTAGCTTAAGTTACTACCTTC | 58.175 | 38.462 | 4.02 | 0.00 | 0.00 | 3.46 |
6963 | 8611 | 7.449395 | TGACACTAGCTTAAGTTACTACCTTCA | 59.551 | 37.037 | 4.02 | 0.00 | 0.00 | 3.02 |
6964 | 8612 | 8.363761 | ACACTAGCTTAAGTTACTACCTTCAT | 57.636 | 34.615 | 4.02 | 0.00 | 0.00 | 2.57 |
6965 | 8613 | 9.471702 | ACACTAGCTTAAGTTACTACCTTCATA | 57.528 | 33.333 | 4.02 | 0.00 | 0.00 | 2.15 |
6969 | 8617 | 8.664211 | AGCTTAAGTTACTACCTTCATAATGC | 57.336 | 34.615 | 4.02 | 0.00 | 0.00 | 3.56 |
6970 | 8618 | 8.265055 | AGCTTAAGTTACTACCTTCATAATGCA | 58.735 | 33.333 | 4.02 | 0.00 | 0.00 | 3.96 |
6971 | 8619 | 8.889717 | GCTTAAGTTACTACCTTCATAATGCAA | 58.110 | 33.333 | 4.02 | 0.00 | 0.00 | 4.08 |
6974 | 8622 | 8.863872 | AAGTTACTACCTTCATAATGCAAAGT | 57.136 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
6975 | 8623 | 9.953565 | AAGTTACTACCTTCATAATGCAAAGTA | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
6976 | 8624 | 9.953565 | AGTTACTACCTTCATAATGCAAAGTAA | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
6977 | 8625 | 9.983804 | GTTACTACCTTCATAATGCAAAGTAAC | 57.016 | 33.333 | 0.00 | 0.00 | 39.37 | 2.50 |
6978 | 8626 | 9.727859 | TTACTACCTTCATAATGCAAAGTAACA | 57.272 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
6979 | 8627 | 8.807948 | ACTACCTTCATAATGCAAAGTAACAT | 57.192 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
6980 | 8628 | 9.899661 | ACTACCTTCATAATGCAAAGTAACATA | 57.100 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
7041 | 8689 | 6.718454 | AGACTCATCTTGTCTTGAAAATCG | 57.282 | 37.500 | 0.00 | 0.00 | 41.45 | 3.34 |
7042 | 8690 | 5.121454 | AGACTCATCTTGTCTTGAAAATCGC | 59.879 | 40.000 | 0.00 | 0.00 | 41.45 | 4.58 |
7043 | 8691 | 4.999950 | ACTCATCTTGTCTTGAAAATCGCT | 59.000 | 37.500 | 0.00 | 0.00 | 0.00 | 4.93 |
7044 | 8692 | 6.166279 | ACTCATCTTGTCTTGAAAATCGCTA | 58.834 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
7045 | 8693 | 6.820656 | ACTCATCTTGTCTTGAAAATCGCTAT | 59.179 | 34.615 | 0.00 | 0.00 | 0.00 | 2.97 |
7046 | 8694 | 7.008440 | TCATCTTGTCTTGAAAATCGCTATG | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 2.23 |
7047 | 8695 | 6.595326 | TCATCTTGTCTTGAAAATCGCTATGT | 59.405 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
7048 | 8696 | 6.801539 | TCTTGTCTTGAAAATCGCTATGTT | 57.198 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
7049 | 8697 | 7.899178 | TCTTGTCTTGAAAATCGCTATGTTA | 57.101 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
7050 | 8698 | 7.739295 | TCTTGTCTTGAAAATCGCTATGTTAC | 58.261 | 34.615 | 0.00 | 0.00 | 0.00 | 2.50 |
7051 | 8699 | 7.386573 | TCTTGTCTTGAAAATCGCTATGTTACA | 59.613 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
7052 | 8700 | 7.060600 | TGTCTTGAAAATCGCTATGTTACAG | 57.939 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
7053 | 8701 | 6.649141 | TGTCTTGAAAATCGCTATGTTACAGT | 59.351 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
7054 | 8702 | 7.815549 | TGTCTTGAAAATCGCTATGTTACAGTA | 59.184 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
7055 | 8703 | 8.653338 | GTCTTGAAAATCGCTATGTTACAGTAA | 58.347 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
7056 | 8704 | 8.653338 | TCTTGAAAATCGCTATGTTACAGTAAC | 58.347 | 33.333 | 15.58 | 15.58 | 39.11 | 2.50 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
90 | 95 | 1.798725 | GCTTACGTGCACGCTACGA | 60.799 | 57.895 | 37.35 | 17.96 | 43.82 | 3.43 |
164 | 169 | 6.299141 | TGTTTGGATAAAAGAGAGAGTTGCT | 58.701 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
310 | 315 | 2.284754 | TGCCATGGTTGCTCAACTAA | 57.715 | 45.000 | 14.67 | 2.70 | 40.94 | 2.24 |
311 | 316 | 1.885887 | GTTGCCATGGTTGCTCAACTA | 59.114 | 47.619 | 19.25 | 6.96 | 40.94 | 2.24 |
451 | 456 | 3.392595 | CTCGTACCTCGTGGTCCGC | 62.393 | 68.421 | 15.74 | 6.30 | 44.78 | 5.54 |
452 | 457 | 2.758089 | CCTCGTACCTCGTGGTCCG | 61.758 | 68.421 | 13.38 | 14.05 | 44.78 | 4.79 |
472 | 477 | 4.347453 | ACACGCCCCGTACGTCAC | 62.347 | 66.667 | 15.21 | 1.49 | 42.96 | 3.67 |
699 | 720 | 9.476202 | AAATGAGCACTTGGTATTTAGAAAAAC | 57.524 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
839 | 860 | 8.368668 | ACTTCTCTACTGTATGCTTTTGTAACT | 58.631 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
873 | 926 | 7.934120 | TCTCTTCCTCCTGAGTTTTTCTTTTAG | 59.066 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
908 | 961 | 9.653287 | TGTTTCCTGATTTGTTCTATACTAGTG | 57.347 | 33.333 | 5.39 | 0.00 | 0.00 | 2.74 |
1199 | 1252 | 2.105128 | GCATCACGTCCTCCCTCG | 59.895 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
1437 | 1490 | 1.355916 | CGAGGGGAACGAGACGATC | 59.644 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1585 | 1640 | 3.963374 | TCTGCTGCATATAAGGTCAGTCT | 59.037 | 43.478 | 1.31 | 0.00 | 0.00 | 3.24 |
1619 | 1674 | 2.307768 | TCTACCGCCTCAATAGACCTG | 58.692 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
1672 | 1727 | 5.952347 | ACAAGAGAACAAACTTCCCTCTTTT | 59.048 | 36.000 | 0.00 | 0.00 | 40.88 | 2.27 |
1805 | 1860 | 2.292267 | CATTGCACATCTACCACCTCC | 58.708 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1915 | 1972 | 1.142465 | CCCTCCACATCCTTGGATCAG | 59.858 | 57.143 | 0.00 | 0.00 | 44.97 | 2.90 |
1945 | 2002 | 8.798402 | CATACCCTGTTACCAAAGAAAATAACA | 58.202 | 33.333 | 0.00 | 0.00 | 36.40 | 2.41 |
1946 | 2003 | 8.248253 | CCATACCCTGTTACCAAAGAAAATAAC | 58.752 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
1957 | 2030 | 3.458118 | CTCCAATCCATACCCTGTTACCA | 59.542 | 47.826 | 0.00 | 0.00 | 0.00 | 3.25 |
1958 | 2031 | 3.181443 | CCTCCAATCCATACCCTGTTACC | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 2.85 |
2082 | 2456 | 2.343426 | GCAAGCTTACACCCAGCCC | 61.343 | 63.158 | 0.00 | 0.00 | 38.09 | 5.19 |
2221 | 2596 | 8.732746 | AAAAACTGTTCTCTCTTAAGCTTGTA | 57.267 | 30.769 | 9.86 | 0.00 | 0.00 | 2.41 |
2292 | 2669 | 7.436673 | CGTCTTTTCTAAGCACAATAGAGCTAT | 59.563 | 37.037 | 0.00 | 0.00 | 40.96 | 2.97 |
2322 | 2699 | 0.249741 | CCCTCGACAAAAGACACGGT | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
2336 | 2713 | 3.262420 | CAACAGGTCATAACTTCCCTCG | 58.738 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2367 | 2744 | 3.921021 | AGTTTATGAGACTTTCAGACGCG | 59.079 | 43.478 | 3.53 | 3.53 | 39.68 | 6.01 |
2379 | 2756 | 4.842574 | TGCATGGCTACAAGTTTATGAGA | 58.157 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
2399 | 2776 | 4.630894 | TGACGACCATGGATATTTTTGC | 57.369 | 40.909 | 21.47 | 0.00 | 0.00 | 3.68 |
2418 | 2795 | 1.143838 | CGGATGAGCGGTGGAATGA | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
2435 | 2812 | 2.047274 | ATGACAAGTGGCGACCCG | 60.047 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
2448 | 2825 | 4.157289 | AGTGTGATGCAGAAAATGGATGAC | 59.843 | 41.667 | 0.00 | 0.00 | 42.78 | 3.06 |
2499 | 2876 | 3.574614 | CAGGACGCCTTAAAAACAATGG | 58.425 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2500 | 2877 | 2.986479 | GCAGGACGCCTTAAAAACAATG | 59.014 | 45.455 | 0.00 | 0.00 | 32.94 | 2.82 |
2501 | 2878 | 3.297830 | GCAGGACGCCTTAAAAACAAT | 57.702 | 42.857 | 0.00 | 0.00 | 32.94 | 2.71 |
2502 | 2879 | 2.785713 | GCAGGACGCCTTAAAAACAA | 57.214 | 45.000 | 0.00 | 0.00 | 32.94 | 2.83 |
2516 | 2893 | 1.596934 | CTAAGCGTCCAAGGCAGGA | 59.403 | 57.895 | 0.00 | 0.00 | 34.64 | 3.86 |
2517 | 2894 | 1.450312 | CCTAAGCGTCCAAGGCAGG | 60.450 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
2518 | 2895 | 4.208632 | CCTAAGCGTCCAAGGCAG | 57.791 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
2536 | 2913 | 4.545706 | TGCCAGGGCGCCTTATCG | 62.546 | 66.667 | 28.56 | 10.79 | 45.51 | 2.92 |
2537 | 2914 | 2.592861 | CTGCCAGGGCGCCTTATC | 60.593 | 66.667 | 28.56 | 14.20 | 45.51 | 1.75 |
2538 | 2915 | 4.883354 | GCTGCCAGGGCGCCTTAT | 62.883 | 66.667 | 28.56 | 10.23 | 45.51 | 1.73 |
2551 | 2928 | 1.600413 | GGCATATTTGTAAGGCGCTGC | 60.600 | 52.381 | 7.64 | 4.69 | 0.00 | 5.25 |
2552 | 2929 | 1.001378 | GGGCATATTTGTAAGGCGCTG | 60.001 | 52.381 | 7.64 | 0.00 | 34.95 | 5.18 |
2553 | 2930 | 1.318576 | GGGCATATTTGTAAGGCGCT | 58.681 | 50.000 | 7.64 | 0.00 | 34.95 | 5.92 |
2554 | 2931 | 0.040425 | CGGGCATATTTGTAAGGCGC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
2555 | 2932 | 0.040425 | GCGGGCATATTTGTAAGGCG | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2556 | 2933 | 0.313987 | GGCGGGCATATTTGTAAGGC | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2557 | 2934 | 1.981256 | AGGCGGGCATATTTGTAAGG | 58.019 | 50.000 | 3.78 | 0.00 | 0.00 | 2.69 |
2558 | 2935 | 4.213482 | GTCTAAGGCGGGCATATTTGTAAG | 59.787 | 45.833 | 3.78 | 0.00 | 0.00 | 2.34 |
2559 | 2936 | 4.131596 | GTCTAAGGCGGGCATATTTGTAA | 58.868 | 43.478 | 3.78 | 0.00 | 0.00 | 2.41 |
2560 | 2937 | 3.735591 | GTCTAAGGCGGGCATATTTGTA | 58.264 | 45.455 | 3.78 | 0.00 | 0.00 | 2.41 |
2561 | 2938 | 2.572290 | GTCTAAGGCGGGCATATTTGT | 58.428 | 47.619 | 3.78 | 0.00 | 0.00 | 2.83 |
2562 | 2939 | 1.531149 | CGTCTAAGGCGGGCATATTTG | 59.469 | 52.381 | 3.78 | 0.00 | 0.00 | 2.32 |
2563 | 2940 | 1.878953 | CGTCTAAGGCGGGCATATTT | 58.121 | 50.000 | 3.78 | 0.00 | 0.00 | 1.40 |
2564 | 2941 | 0.602905 | GCGTCTAAGGCGGGCATATT | 60.603 | 55.000 | 3.78 | 0.00 | 0.00 | 1.28 |
2565 | 2942 | 1.004918 | GCGTCTAAGGCGGGCATAT | 60.005 | 57.895 | 3.78 | 0.00 | 0.00 | 1.78 |
2566 | 2943 | 1.682451 | AAGCGTCTAAGGCGGGCATA | 61.682 | 55.000 | 3.78 | 0.00 | 33.62 | 3.14 |
2567 | 2944 | 1.682451 | TAAGCGTCTAAGGCGGGCAT | 61.682 | 55.000 | 3.78 | 0.00 | 33.62 | 4.40 |
2568 | 2945 | 2.292794 | CTAAGCGTCTAAGGCGGGCA | 62.293 | 60.000 | 3.78 | 0.00 | 33.62 | 5.36 |
2569 | 2946 | 1.591863 | CTAAGCGTCTAAGGCGGGC | 60.592 | 63.158 | 0.00 | 0.00 | 33.62 | 6.13 |
2570 | 2947 | 1.067582 | CCTAAGCGTCTAAGGCGGG | 59.932 | 63.158 | 0.00 | 0.00 | 33.62 | 6.13 |
2571 | 2948 | 1.591863 | GCCTAAGCGTCTAAGGCGG | 60.592 | 63.158 | 0.00 | 0.00 | 45.82 | 6.13 |
2572 | 2949 | 4.014065 | GCCTAAGCGTCTAAGGCG | 57.986 | 61.111 | 0.00 | 0.00 | 45.82 | 5.52 |
2601 | 2978 | 3.775654 | AGCACCACCCGCTCTAGC | 61.776 | 66.667 | 0.00 | 0.00 | 33.35 | 3.42 |
2608 | 2985 | 4.077184 | TAAGGCGAGCACCACCCG | 62.077 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
2609 | 2986 | 2.125106 | CTAAGGCGAGCACCACCC | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
2610 | 2987 | 2.125106 | CCTAAGGCGAGCACCACC | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
2611 | 2988 | 1.448013 | GACCTAAGGCGAGCACCAC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 4.16 |
2612 | 2989 | 1.605058 | GAGACCTAAGGCGAGCACCA | 61.605 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2613 | 2990 | 1.142097 | GAGACCTAAGGCGAGCACC | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
2614 | 2991 | 1.142097 | GGAGACCTAAGGCGAGCAC | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 4.40 |
2615 | 2992 | 0.614979 | AAGGAGACCTAAGGCGAGCA | 60.615 | 55.000 | 0.00 | 0.00 | 31.13 | 4.26 |
2616 | 2993 | 0.179097 | CAAGGAGACCTAAGGCGAGC | 60.179 | 60.000 | 0.00 | 0.00 | 31.13 | 5.03 |
2617 | 2994 | 0.179097 | GCAAGGAGACCTAAGGCGAG | 60.179 | 60.000 | 0.00 | 0.00 | 31.13 | 5.03 |
2618 | 2995 | 1.614241 | GGCAAGGAGACCTAAGGCGA | 61.614 | 60.000 | 0.00 | 0.00 | 31.13 | 5.54 |
2619 | 2996 | 1.153349 | GGCAAGGAGACCTAAGGCG | 60.153 | 63.158 | 0.00 | 0.00 | 31.13 | 5.52 |
2620 | 2997 | 1.153349 | CGGCAAGGAGACCTAAGGC | 60.153 | 63.158 | 0.00 | 0.00 | 31.13 | 4.35 |
2621 | 2998 | 1.153349 | GCGGCAAGGAGACCTAAGG | 60.153 | 63.158 | 0.00 | 0.00 | 31.13 | 2.69 |
2622 | 2999 | 1.153349 | GGCGGCAAGGAGACCTAAG | 60.153 | 63.158 | 3.07 | 0.00 | 31.13 | 2.18 |
2623 | 3000 | 1.198759 | AAGGCGGCAAGGAGACCTAA | 61.199 | 55.000 | 13.08 | 0.00 | 31.13 | 2.69 |
2624 | 3001 | 0.324923 | TAAGGCGGCAAGGAGACCTA | 60.325 | 55.000 | 13.08 | 0.00 | 31.13 | 3.08 |
2625 | 3002 | 1.198759 | TTAAGGCGGCAAGGAGACCT | 61.199 | 55.000 | 13.08 | 0.00 | 33.87 | 3.85 |
2626 | 3003 | 0.322187 | TTTAAGGCGGCAAGGAGACC | 60.322 | 55.000 | 13.08 | 0.00 | 0.00 | 3.85 |
2627 | 3004 | 1.530323 | TTTTAAGGCGGCAAGGAGAC | 58.470 | 50.000 | 13.08 | 0.00 | 0.00 | 3.36 |
2628 | 3005 | 1.883926 | GTTTTTAAGGCGGCAAGGAGA | 59.116 | 47.619 | 13.08 | 0.00 | 0.00 | 3.71 |
2629 | 3006 | 1.611491 | TGTTTTTAAGGCGGCAAGGAG | 59.389 | 47.619 | 13.08 | 0.00 | 0.00 | 3.69 |
2630 | 3007 | 1.693627 | TGTTTTTAAGGCGGCAAGGA | 58.306 | 45.000 | 13.08 | 0.00 | 0.00 | 3.36 |
2631 | 3008 | 2.517650 | TTGTTTTTAAGGCGGCAAGG | 57.482 | 45.000 | 13.08 | 0.00 | 0.00 | 3.61 |
2632 | 3009 | 2.736192 | CCATTGTTTTTAAGGCGGCAAG | 59.264 | 45.455 | 13.08 | 0.00 | 0.00 | 4.01 |
2633 | 3010 | 2.103263 | ACCATTGTTTTTAAGGCGGCAA | 59.897 | 40.909 | 13.08 | 0.00 | 0.00 | 4.52 |
2634 | 3011 | 1.689273 | ACCATTGTTTTTAAGGCGGCA | 59.311 | 42.857 | 13.08 | 0.00 | 0.00 | 5.69 |
2635 | 3012 | 2.065512 | CACCATTGTTTTTAAGGCGGC | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 6.53 |
2636 | 3013 | 2.065512 | GCACCATTGTTTTTAAGGCGG | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
2637 | 3014 | 2.065512 | GGCACCATTGTTTTTAAGGCG | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
2638 | 3015 | 3.118905 | TGGCACCATTGTTTTTAAGGC | 57.881 | 42.857 | 0.00 | 0.00 | 0.00 | 4.35 |
2639 | 3016 | 5.151297 | AGATGGCACCATTGTTTTTAAGG | 57.849 | 39.130 | 3.16 | 0.00 | 36.70 | 2.69 |
2640 | 3017 | 6.808212 | CACTAGATGGCACCATTGTTTTTAAG | 59.192 | 38.462 | 3.16 | 0.00 | 36.70 | 1.85 |
2641 | 3018 | 6.686630 | CACTAGATGGCACCATTGTTTTTAA | 58.313 | 36.000 | 3.16 | 0.00 | 36.70 | 1.52 |
2642 | 3019 | 5.336372 | GCACTAGATGGCACCATTGTTTTTA | 60.336 | 40.000 | 3.16 | 0.00 | 36.70 | 1.52 |
2643 | 3020 | 4.561326 | GCACTAGATGGCACCATTGTTTTT | 60.561 | 41.667 | 3.16 | 0.00 | 36.70 | 1.94 |
2644 | 3021 | 3.056607 | GCACTAGATGGCACCATTGTTTT | 60.057 | 43.478 | 3.16 | 0.00 | 36.70 | 2.43 |
2645 | 3022 | 2.493278 | GCACTAGATGGCACCATTGTTT | 59.507 | 45.455 | 3.16 | 0.00 | 36.70 | 2.83 |
2646 | 3023 | 2.094675 | GCACTAGATGGCACCATTGTT | 58.905 | 47.619 | 3.16 | 0.00 | 36.70 | 2.83 |
2647 | 3024 | 1.004628 | TGCACTAGATGGCACCATTGT | 59.995 | 47.619 | 3.16 | 1.35 | 36.70 | 2.71 |
2648 | 3025 | 1.753930 | TGCACTAGATGGCACCATTG | 58.246 | 50.000 | 3.16 | 0.00 | 36.70 | 2.82 |
2649 | 3026 | 2.512692 | TTGCACTAGATGGCACCATT | 57.487 | 45.000 | 3.16 | 0.00 | 40.23 | 3.16 |
2650 | 3027 | 2.304092 | CATTGCACTAGATGGCACCAT | 58.696 | 47.619 | 0.66 | 0.66 | 40.23 | 3.55 |
2651 | 3028 | 1.682702 | CCATTGCACTAGATGGCACCA | 60.683 | 52.381 | 2.24 | 0.00 | 40.23 | 4.17 |
2652 | 3029 | 1.027357 | CCATTGCACTAGATGGCACC | 58.973 | 55.000 | 2.24 | 0.00 | 40.23 | 5.01 |
2653 | 3030 | 1.402968 | CACCATTGCACTAGATGGCAC | 59.597 | 52.381 | 13.92 | 0.00 | 45.36 | 5.01 |
2654 | 3031 | 1.753930 | CACCATTGCACTAGATGGCA | 58.246 | 50.000 | 13.92 | 6.30 | 45.36 | 4.92 |
2921 | 3298 | 0.332632 | CCAAGAAGGCCCCATCTTCA | 59.667 | 55.000 | 11.92 | 0.00 | 42.09 | 3.02 |
2922 | 3299 | 0.396278 | CCCAAGAAGGCCCCATCTTC | 60.396 | 60.000 | 11.92 | 3.60 | 40.49 | 2.87 |
2961 | 3338 | 5.052481 | TCATCATTCATTCAGTTCTAGCGG | 58.948 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
3174 | 3551 | 0.734889 | CTTTACATCCGCCTTGCCTG | 59.265 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3201 | 3578 | 2.135933 | CACGAGAACCTGAAACCTCAC | 58.864 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3280 | 3657 | 1.067283 | AGACTCAGGCAATGTCAGACG | 60.067 | 52.381 | 0.00 | 0.00 | 33.56 | 4.18 |
3292 | 3669 | 0.681564 | ACCACTCCGCTAGACTCAGG | 60.682 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3341 | 3718 | 8.788806 | CCAACACTTAGTATGGTATGTTTTGAA | 58.211 | 33.333 | 7.87 | 0.00 | 0.00 | 2.69 |
3422 | 3799 | 0.038166 | GAGTGGGGGCATTCTTGTCA | 59.962 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3493 | 3870 | 5.475719 | ACATCAAGAGAAACCAATGCAATG | 58.524 | 37.500 | 0.00 | 0.00 | 0.00 | 2.82 |
3494 | 3871 | 5.733620 | ACATCAAGAGAAACCAATGCAAT | 57.266 | 34.783 | 0.00 | 0.00 | 0.00 | 3.56 |
3495 | 3872 | 5.534207 | AACATCAAGAGAAACCAATGCAA | 57.466 | 34.783 | 0.00 | 0.00 | 0.00 | 4.08 |
3585 | 4251 | 2.930682 | GCTCCCAATACAAGTCGAGAAC | 59.069 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4092 | 4761 | 2.287188 | GGTGACTGCATTCACAAGTGTG | 60.287 | 50.000 | 30.86 | 5.02 | 46.68 | 3.82 |
4378 | 5047 | 4.036734 | TGTGGTTCATTTTGCTGAGACTTC | 59.963 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
4777 | 5576 | 1.859302 | AGTGAACCCCAAACTGCAAA | 58.141 | 45.000 | 0.00 | 0.00 | 0.00 | 3.68 |
4813 | 5612 | 3.629058 | AGCACATACGCACTATAACTCG | 58.371 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
4938 | 5745 | 9.520515 | ACTAATGATGATTTGACCAGTTAACTT | 57.479 | 29.630 | 5.07 | 0.00 | 0.00 | 2.66 |
5108 | 5915 | 1.069668 | CCTAACGGTGGGGTATACAGC | 59.930 | 57.143 | 5.01 | 0.00 | 0.00 | 4.40 |
5132 | 5939 | 5.815581 | TGCTAAAAGTGTGAAGGGTATGAT | 58.184 | 37.500 | 0.00 | 0.00 | 0.00 | 2.45 |
5209 | 6016 | 8.522830 | CCAATACAGTACAGGATTCAAAAACAT | 58.477 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
5252 | 6059 | 4.072131 | TGGAACAATTGTGCTAGACCTTC | 58.928 | 43.478 | 16.28 | 4.71 | 31.92 | 3.46 |
5305 | 6112 | 3.012518 | CTCTACGAACTAAGGAACCCGA | 58.987 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
5392 | 6199 | 9.679661 | TGGCACTTAGTGATAAATAATCTTGAA | 57.320 | 29.630 | 17.40 | 0.00 | 35.23 | 2.69 |
5405 | 6212 | 4.494091 | AGTAAGCATGGCACTTAGTGAT | 57.506 | 40.909 | 17.40 | 0.00 | 35.23 | 3.06 |
5415 | 6222 | 5.154932 | CACTATCTACGTAGTAAGCATGGC | 58.845 | 45.833 | 21.53 | 0.00 | 45.13 | 4.40 |
5428 | 6235 | 9.635520 | CCAATATTACTTTACCCACTATCTACG | 57.364 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
5431 | 6238 | 9.448587 | AGACCAATATTACTTTACCCACTATCT | 57.551 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
5502 | 6309 | 2.224209 | GCAGGTAATACGCACCCAGTAT | 60.224 | 50.000 | 0.00 | 0.00 | 36.67 | 2.12 |
5572 | 6379 | 2.097466 | ACGCATAGGCATAGCAACAAAC | 59.903 | 45.455 | 0.00 | 0.00 | 41.24 | 2.93 |
5586 | 6393 | 2.871633 | TGATGGTGCACAATACGCATAG | 59.128 | 45.455 | 20.43 | 0.00 | 42.32 | 2.23 |
5838 | 6645 | 0.304098 | GCATGATCTGTCTTCGCAGC | 59.696 | 55.000 | 0.00 | 0.00 | 36.49 | 5.25 |
5856 | 6663 | 2.008329 | CAGATCCTTGTTCTCTGCTGC | 58.992 | 52.381 | 0.00 | 0.00 | 30.91 | 5.25 |
5939 | 6764 | 1.623811 | ACAACTTGGATCACGCCTACT | 59.376 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
6120 | 6962 | 4.986034 | CACATCAAACATGCTGTCAACAAT | 59.014 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
6127 | 6969 | 1.682323 | TGTGCACATCAAACATGCTGT | 59.318 | 42.857 | 17.42 | 0.00 | 40.13 | 4.40 |
6137 | 6980 | 2.948315 | TGCTAAAACACTGTGCACATCA | 59.052 | 40.909 | 22.00 | 0.00 | 0.00 | 3.07 |
6286 | 7140 | 0.770499 | TTGCCTCCATTCCAGTCACA | 59.230 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
6326 | 7180 | 7.176690 | GGAGGAATTCTTCAACAAGTATTTCCA | 59.823 | 37.037 | 18.21 | 0.00 | 36.49 | 3.53 |
6327 | 7181 | 7.539436 | GGAGGAATTCTTCAACAAGTATTTCC | 58.461 | 38.462 | 18.21 | 0.00 | 31.62 | 3.13 |
6328 | 7182 | 7.119262 | TCGGAGGAATTCTTCAACAAGTATTTC | 59.881 | 37.037 | 18.21 | 0.00 | 31.62 | 2.17 |
6334 | 7188 | 4.065088 | TGTCGGAGGAATTCTTCAACAAG | 58.935 | 43.478 | 18.21 | 5.25 | 0.00 | 3.16 |
6335 | 7189 | 4.079980 | TGTCGGAGGAATTCTTCAACAA | 57.920 | 40.909 | 18.21 | 5.54 | 0.00 | 2.83 |
6338 | 7192 | 4.351874 | ACTTGTCGGAGGAATTCTTCAA | 57.648 | 40.909 | 18.21 | 4.87 | 0.00 | 2.69 |
6339 | 7193 | 5.677319 | ATACTTGTCGGAGGAATTCTTCA | 57.323 | 39.130 | 18.21 | 0.00 | 0.00 | 3.02 |
6340 | 7194 | 6.037281 | GGAAATACTTGTCGGAGGAATTCTTC | 59.963 | 42.308 | 9.01 | 9.01 | 0.00 | 2.87 |
6341 | 7195 | 5.880887 | GGAAATACTTGTCGGAGGAATTCTT | 59.119 | 40.000 | 5.23 | 0.00 | 0.00 | 2.52 |
6343 | 7197 | 5.183228 | TGGAAATACTTGTCGGAGGAATTC | 58.817 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
6344 | 7198 | 5.174037 | TGGAAATACTTGTCGGAGGAATT | 57.826 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
6345 | 7199 | 4.384208 | CCTGGAAATACTTGTCGGAGGAAT | 60.384 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
6348 | 7202 | 2.236395 | ACCTGGAAATACTTGTCGGAGG | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6349 | 7203 | 3.262420 | CACCTGGAAATACTTGTCGGAG | 58.738 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
6350 | 7204 | 2.027561 | CCACCTGGAAATACTTGTCGGA | 60.028 | 50.000 | 0.00 | 0.00 | 37.39 | 4.55 |
6351 | 7205 | 2.027561 | TCCACCTGGAAATACTTGTCGG | 60.028 | 50.000 | 0.00 | 0.00 | 42.18 | 4.79 |
6352 | 7206 | 3.262420 | CTCCACCTGGAAATACTTGTCG | 58.738 | 50.000 | 0.00 | 0.00 | 44.91 | 4.35 |
6353 | 7207 | 4.287766 | ACTCCACCTGGAAATACTTGTC | 57.712 | 45.455 | 0.00 | 0.00 | 44.91 | 3.18 |
6354 | 7208 | 4.225267 | CCTACTCCACCTGGAAATACTTGT | 59.775 | 45.833 | 0.00 | 0.00 | 44.91 | 3.16 |
6355 | 7209 | 4.225267 | ACCTACTCCACCTGGAAATACTTG | 59.775 | 45.833 | 0.00 | 0.00 | 44.91 | 3.16 |
6356 | 7210 | 4.436079 | ACCTACTCCACCTGGAAATACTT | 58.564 | 43.478 | 0.00 | 0.00 | 44.91 | 2.24 |
6357 | 7211 | 4.076175 | ACCTACTCCACCTGGAAATACT | 57.924 | 45.455 | 0.00 | 0.00 | 44.91 | 2.12 |
6358 | 7212 | 4.202090 | CGTACCTACTCCACCTGGAAATAC | 60.202 | 50.000 | 0.00 | 0.00 | 44.91 | 1.89 |
6359 | 7213 | 3.956199 | CGTACCTACTCCACCTGGAAATA | 59.044 | 47.826 | 0.00 | 0.00 | 44.91 | 1.40 |
6361 | 7215 | 2.173519 | CGTACCTACTCCACCTGGAAA | 58.826 | 52.381 | 0.00 | 0.00 | 44.91 | 3.13 |
6362 | 7216 | 1.617804 | CCGTACCTACTCCACCTGGAA | 60.618 | 57.143 | 0.00 | 0.00 | 44.91 | 3.53 |
6363 | 7217 | 0.033796 | CCGTACCTACTCCACCTGGA | 60.034 | 60.000 | 0.00 | 0.00 | 43.08 | 3.86 |
6364 | 7218 | 0.033796 | TCCGTACCTACTCCACCTGG | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6365 | 7219 | 1.101331 | GTCCGTACCTACTCCACCTG | 58.899 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6366 | 7220 | 0.998145 | AGTCCGTACCTACTCCACCT | 59.002 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6367 | 7221 | 2.717639 | TAGTCCGTACCTACTCCACC | 57.282 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6369 | 7223 | 3.117491 | CGATAGTCCGTACCTACTCCA | 57.883 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
6391 | 7260 | 7.485913 | CAGTGCACCATTACAAACATTCTATTC | 59.514 | 37.037 | 14.63 | 0.00 | 0.00 | 1.75 |
6410 | 7279 | 6.706853 | AGCTAATTATGCTAGCACAGTGCAC | 61.707 | 44.000 | 27.35 | 16.08 | 43.55 | 4.57 |
6411 | 7280 | 4.684214 | AGCTAATTATGCTAGCACAGTGCA | 60.684 | 41.667 | 27.35 | 12.26 | 43.55 | 4.57 |
6412 | 7281 | 3.812053 | AGCTAATTATGCTAGCACAGTGC | 59.188 | 43.478 | 22.07 | 18.55 | 43.55 | 4.40 |
6413 | 7282 | 4.450419 | GGAGCTAATTATGCTAGCACAGTG | 59.550 | 45.833 | 22.07 | 9.51 | 43.55 | 3.66 |
6467 | 7451 | 4.084328 | GCACCGTACAAAGATCATATCAGC | 60.084 | 45.833 | 0.00 | 0.00 | 0.00 | 4.26 |
6473 | 7457 | 2.420022 | GCTTGCACCGTACAAAGATCAT | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
6529 | 7513 | 5.437060 | GCACTATATTTTGGAACAGAGGGA | 58.563 | 41.667 | 0.00 | 0.00 | 42.39 | 4.20 |
6531 | 7515 | 4.260784 | GCGCACTATATTTTGGAACAGAGG | 60.261 | 45.833 | 0.30 | 0.00 | 42.39 | 3.69 |
6532 | 7516 | 4.260784 | GGCGCACTATATTTTGGAACAGAG | 60.261 | 45.833 | 10.83 | 0.00 | 42.39 | 3.35 |
6533 | 7517 | 3.625764 | GGCGCACTATATTTTGGAACAGA | 59.374 | 43.478 | 10.83 | 0.00 | 42.39 | 3.41 |
6534 | 7518 | 3.243068 | GGGCGCACTATATTTTGGAACAG | 60.243 | 47.826 | 10.83 | 0.00 | 42.39 | 3.16 |
6536 | 7520 | 2.286772 | CGGGCGCACTATATTTTGGAAC | 60.287 | 50.000 | 8.62 | 0.00 | 0.00 | 3.62 |
6537 | 7521 | 1.944024 | CGGGCGCACTATATTTTGGAA | 59.056 | 47.619 | 8.62 | 0.00 | 0.00 | 3.53 |
6538 | 7522 | 1.588674 | CGGGCGCACTATATTTTGGA | 58.411 | 50.000 | 8.62 | 0.00 | 0.00 | 3.53 |
6539 | 7523 | 0.040425 | GCGGGCGCACTATATTTTGG | 60.040 | 55.000 | 8.62 | 0.00 | 41.49 | 3.28 |
6540 | 7524 | 0.384230 | CGCGGGCGCACTATATTTTG | 60.384 | 55.000 | 8.62 | 0.00 | 42.06 | 2.44 |
6541 | 7525 | 1.938861 | CGCGGGCGCACTATATTTT | 59.061 | 52.632 | 8.62 | 0.00 | 42.06 | 1.82 |
6542 | 7526 | 3.637714 | CGCGGGCGCACTATATTT | 58.362 | 55.556 | 8.62 | 0.00 | 42.06 | 1.40 |
6554 | 7538 | 3.121030 | CACCTCAGAAAGCGCGGG | 61.121 | 66.667 | 8.83 | 0.00 | 0.00 | 6.13 |
6555 | 7539 | 3.793144 | GCACCTCAGAAAGCGCGG | 61.793 | 66.667 | 8.83 | 0.00 | 0.00 | 6.46 |
6556 | 7540 | 2.606961 | TTGCACCTCAGAAAGCGCG | 61.607 | 57.895 | 0.00 | 0.00 | 0.00 | 6.86 |
6557 | 7541 | 1.081840 | GTTGCACCTCAGAAAGCGC | 60.082 | 57.895 | 0.00 | 0.00 | 0.00 | 5.92 |
6558 | 7542 | 0.947244 | AAGTTGCACCTCAGAAAGCG | 59.053 | 50.000 | 0.00 | 0.00 | 0.00 | 4.68 |
6559 | 7543 | 2.358898 | TCAAAGTTGCACCTCAGAAAGC | 59.641 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
6560 | 7544 | 3.243201 | GGTCAAAGTTGCACCTCAGAAAG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
6561 | 7545 | 2.687935 | GGTCAAAGTTGCACCTCAGAAA | 59.312 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
6562 | 7546 | 2.297701 | GGTCAAAGTTGCACCTCAGAA | 58.702 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
6563 | 7547 | 1.211703 | TGGTCAAAGTTGCACCTCAGA | 59.788 | 47.619 | 11.44 | 0.00 | 32.88 | 3.27 |
6564 | 7548 | 1.679139 | TGGTCAAAGTTGCACCTCAG | 58.321 | 50.000 | 11.44 | 0.00 | 32.88 | 3.35 |
6565 | 7549 | 2.363306 | ATGGTCAAAGTTGCACCTCA | 57.637 | 45.000 | 11.44 | 0.00 | 32.88 | 3.86 |
6566 | 7550 | 4.846779 | TTTATGGTCAAAGTTGCACCTC | 57.153 | 40.909 | 11.44 | 0.00 | 32.88 | 3.85 |
6567 | 7551 | 5.806654 | AATTTATGGTCAAAGTTGCACCT | 57.193 | 34.783 | 11.44 | 0.00 | 32.88 | 4.00 |
6568 | 7552 | 7.095397 | GGTTAAATTTATGGTCAAAGTTGCACC | 60.095 | 37.037 | 0.00 | 0.00 | 30.13 | 5.01 |
6569 | 7553 | 7.439655 | TGGTTAAATTTATGGTCAAAGTTGCAC | 59.560 | 33.333 | 0.00 | 0.00 | 29.44 | 4.57 |
6570 | 7554 | 7.500992 | TGGTTAAATTTATGGTCAAAGTTGCA | 58.499 | 30.769 | 0.00 | 0.00 | 29.44 | 4.08 |
6571 | 7555 | 7.954788 | TGGTTAAATTTATGGTCAAAGTTGC | 57.045 | 32.000 | 0.00 | 0.00 | 29.44 | 4.17 |
6572 | 7556 | 8.484008 | CGTTGGTTAAATTTATGGTCAAAGTTG | 58.516 | 33.333 | 0.00 | 0.00 | 29.44 | 3.16 |
6573 | 7557 | 8.414778 | TCGTTGGTTAAATTTATGGTCAAAGTT | 58.585 | 29.630 | 0.00 | 0.00 | 31.36 | 2.66 |
6574 | 7558 | 7.942990 | TCGTTGGTTAAATTTATGGTCAAAGT | 58.057 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
6575 | 7559 | 8.293867 | TCTCGTTGGTTAAATTTATGGTCAAAG | 58.706 | 33.333 | 0.00 | 4.88 | 0.00 | 2.77 |
6576 | 7560 | 8.077386 | GTCTCGTTGGTTAAATTTATGGTCAAA | 58.923 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
6577 | 7561 | 7.308710 | GGTCTCGTTGGTTAAATTTATGGTCAA | 60.309 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
6578 | 7562 | 6.149807 | GGTCTCGTTGGTTAAATTTATGGTCA | 59.850 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
6579 | 7563 | 6.149807 | TGGTCTCGTTGGTTAAATTTATGGTC | 59.850 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
6580 | 7564 | 6.005198 | TGGTCTCGTTGGTTAAATTTATGGT | 58.995 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
6581 | 7565 | 6.503589 | TGGTCTCGTTGGTTAAATTTATGG | 57.496 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
6582 | 7566 | 7.537306 | CAGTTGGTCTCGTTGGTTAAATTTATG | 59.463 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
6583 | 7567 | 7.590279 | CAGTTGGTCTCGTTGGTTAAATTTAT | 58.410 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
6584 | 7568 | 6.513720 | GCAGTTGGTCTCGTTGGTTAAATTTA | 60.514 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
6585 | 7569 | 5.735070 | GCAGTTGGTCTCGTTGGTTAAATTT | 60.735 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
6586 | 7570 | 4.261447 | GCAGTTGGTCTCGTTGGTTAAATT | 60.261 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
6587 | 7571 | 3.252458 | GCAGTTGGTCTCGTTGGTTAAAT | 59.748 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
6588 | 7572 | 2.614983 | GCAGTTGGTCTCGTTGGTTAAA | 59.385 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
6589 | 7573 | 2.215196 | GCAGTTGGTCTCGTTGGTTAA | 58.785 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
6590 | 7574 | 1.870580 | CGCAGTTGGTCTCGTTGGTTA | 60.871 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
6591 | 7575 | 1.157870 | CGCAGTTGGTCTCGTTGGTT | 61.158 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6592 | 7576 | 1.594293 | CGCAGTTGGTCTCGTTGGT | 60.594 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
6593 | 7577 | 2.317609 | CCGCAGTTGGTCTCGTTGG | 61.318 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
6594 | 7578 | 2.954753 | GCCGCAGTTGGTCTCGTTG | 61.955 | 63.158 | 0.00 | 0.00 | 0.00 | 4.10 |
6595 | 7579 | 2.665185 | GCCGCAGTTGGTCTCGTT | 60.665 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
6596 | 7580 | 3.865929 | CTGCCGCAGTTGGTCTCGT | 62.866 | 63.158 | 12.54 | 0.00 | 0.00 | 4.18 |
6597 | 7581 | 3.114616 | CTGCCGCAGTTGGTCTCG | 61.115 | 66.667 | 12.54 | 0.00 | 0.00 | 4.04 |
6598 | 7582 | 1.294659 | CTTCTGCCGCAGTTGGTCTC | 61.295 | 60.000 | 19.77 | 0.00 | 32.61 | 3.36 |
6599 | 7583 | 1.302033 | CTTCTGCCGCAGTTGGTCT | 60.302 | 57.895 | 19.77 | 0.00 | 32.61 | 3.85 |
6600 | 7584 | 0.884704 | TTCTTCTGCCGCAGTTGGTC | 60.885 | 55.000 | 19.77 | 0.00 | 32.61 | 4.02 |
6601 | 7585 | 0.465460 | TTTCTTCTGCCGCAGTTGGT | 60.465 | 50.000 | 19.77 | 0.00 | 32.61 | 3.67 |
6602 | 7586 | 0.667993 | TTTTCTTCTGCCGCAGTTGG | 59.332 | 50.000 | 19.77 | 11.02 | 32.61 | 3.77 |
6603 | 7587 | 2.490328 | TTTTTCTTCTGCCGCAGTTG | 57.510 | 45.000 | 19.77 | 13.34 | 32.61 | 3.16 |
6636 | 7620 | 9.450807 | CAGTGAATTCGTATTTGAAAGAAGTTT | 57.549 | 29.630 | 0.04 | 0.00 | 0.00 | 2.66 |
6637 | 7621 | 8.836413 | TCAGTGAATTCGTATTTGAAAGAAGTT | 58.164 | 29.630 | 0.04 | 0.00 | 0.00 | 2.66 |
6638 | 7622 | 8.378172 | TCAGTGAATTCGTATTTGAAAGAAGT | 57.622 | 30.769 | 0.04 | 0.00 | 0.00 | 3.01 |
6651 | 7635 | 9.722056 | GAGCAAAAATTATATCAGTGAATTCGT | 57.278 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
6652 | 7636 | 9.173939 | GGAGCAAAAATTATATCAGTGAATTCG | 57.826 | 33.333 | 0.00 | 0.00 | 0.00 | 3.34 |
6653 | 7637 | 9.468532 | GGGAGCAAAAATTATATCAGTGAATTC | 57.531 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
6654 | 7638 | 8.137437 | CGGGAGCAAAAATTATATCAGTGAATT | 58.863 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
6655 | 7639 | 7.651808 | CGGGAGCAAAAATTATATCAGTGAAT | 58.348 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
6656 | 7640 | 7.026631 | CGGGAGCAAAAATTATATCAGTGAA | 57.973 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
6657 | 7641 | 6.618287 | CGGGAGCAAAAATTATATCAGTGA | 57.382 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
6682 | 7666 | 5.712217 | TTTAACTATCAAGACCGATTGCG | 57.288 | 39.130 | 0.00 | 0.00 | 37.24 | 4.85 |
6683 | 7667 | 9.434559 | GTAAATTTAACTATCAAGACCGATTGC | 57.565 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
6686 | 7670 | 9.886132 | ACTGTAAATTTAACTATCAAGACCGAT | 57.114 | 29.630 | 0.00 | 0.00 | 0.00 | 4.18 |
6687 | 7671 | 9.362539 | GACTGTAAATTTAACTATCAAGACCGA | 57.637 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
6688 | 7672 | 9.146984 | TGACTGTAAATTTAACTATCAAGACCG | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 4.79 |
6698 | 7682 | 9.516314 | GCTTCAACTTTGACTGTAAATTTAACT | 57.484 | 29.630 | 0.00 | 0.00 | 36.83 | 2.24 |
6699 | 7683 | 9.296400 | TGCTTCAACTTTGACTGTAAATTTAAC | 57.704 | 29.630 | 0.00 | 0.00 | 36.83 | 2.01 |
6700 | 7684 | 9.296400 | GTGCTTCAACTTTGACTGTAAATTTAA | 57.704 | 29.630 | 0.00 | 0.00 | 36.83 | 1.52 |
6701 | 7685 | 7.642194 | CGTGCTTCAACTTTGACTGTAAATTTA | 59.358 | 33.333 | 0.00 | 0.00 | 36.83 | 1.40 |
6702 | 7686 | 6.472163 | CGTGCTTCAACTTTGACTGTAAATTT | 59.528 | 34.615 | 0.00 | 0.00 | 36.83 | 1.82 |
6703 | 7687 | 5.971202 | CGTGCTTCAACTTTGACTGTAAATT | 59.029 | 36.000 | 0.00 | 0.00 | 36.83 | 1.82 |
6704 | 7688 | 5.505654 | CCGTGCTTCAACTTTGACTGTAAAT | 60.506 | 40.000 | 0.00 | 0.00 | 36.83 | 1.40 |
6705 | 7689 | 4.201871 | CCGTGCTTCAACTTTGACTGTAAA | 60.202 | 41.667 | 0.00 | 0.00 | 36.83 | 2.01 |
6706 | 7690 | 3.311322 | CCGTGCTTCAACTTTGACTGTAA | 59.689 | 43.478 | 0.00 | 0.00 | 36.83 | 2.41 |
6707 | 7691 | 2.869801 | CCGTGCTTCAACTTTGACTGTA | 59.130 | 45.455 | 0.00 | 0.00 | 36.83 | 2.74 |
6708 | 7692 | 1.670811 | CCGTGCTTCAACTTTGACTGT | 59.329 | 47.619 | 0.00 | 0.00 | 36.83 | 3.55 |
6709 | 7693 | 1.939934 | TCCGTGCTTCAACTTTGACTG | 59.060 | 47.619 | 0.00 | 0.00 | 36.83 | 3.51 |
6710 | 7694 | 2.158957 | TCTCCGTGCTTCAACTTTGACT | 60.159 | 45.455 | 0.00 | 0.00 | 36.83 | 3.41 |
6711 | 7695 | 2.210116 | TCTCCGTGCTTCAACTTTGAC | 58.790 | 47.619 | 0.00 | 0.00 | 36.83 | 3.18 |
6712 | 7696 | 2.613026 | TCTCCGTGCTTCAACTTTGA | 57.387 | 45.000 | 0.00 | 0.00 | 34.92 | 2.69 |
6713 | 7697 | 4.245660 | TCTATCTCCGTGCTTCAACTTTG | 58.754 | 43.478 | 0.00 | 0.00 | 0.00 | 2.77 |
6714 | 7698 | 4.537135 | TCTATCTCCGTGCTTCAACTTT | 57.463 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
6715 | 7699 | 4.160439 | TCATCTATCTCCGTGCTTCAACTT | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
6716 | 7700 | 3.701542 | TCATCTATCTCCGTGCTTCAACT | 59.298 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
6717 | 7701 | 4.046938 | TCATCTATCTCCGTGCTTCAAC | 57.953 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
6718 | 7702 | 4.686972 | CTTCATCTATCTCCGTGCTTCAA | 58.313 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
6719 | 7703 | 3.491619 | GCTTCATCTATCTCCGTGCTTCA | 60.492 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
6720 | 7704 | 3.056304 | GCTTCATCTATCTCCGTGCTTC | 58.944 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6721 | 7705 | 2.432146 | TGCTTCATCTATCTCCGTGCTT | 59.568 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
6722 | 7706 | 2.034878 | TGCTTCATCTATCTCCGTGCT | 58.965 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
6723 | 7707 | 2.131183 | GTGCTTCATCTATCTCCGTGC | 58.869 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
6724 | 7708 | 3.724508 | AGTGCTTCATCTATCTCCGTG | 57.275 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
6725 | 7709 | 4.207955 | TGTAGTGCTTCATCTATCTCCGT | 58.792 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
6726 | 7710 | 4.837896 | TGTAGTGCTTCATCTATCTCCG | 57.162 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
6727 | 7711 | 6.520272 | ACAATGTAGTGCTTCATCTATCTCC | 58.480 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6728 | 7712 | 8.572185 | TCTACAATGTAGTGCTTCATCTATCTC | 58.428 | 37.037 | 18.71 | 0.00 | 0.00 | 2.75 |
6729 | 7713 | 8.470657 | TCTACAATGTAGTGCTTCATCTATCT | 57.529 | 34.615 | 18.71 | 0.00 | 0.00 | 1.98 |
6730 | 7714 | 9.703892 | ATTCTACAATGTAGTGCTTCATCTATC | 57.296 | 33.333 | 18.71 | 0.00 | 0.00 | 2.08 |
6731 | 7715 | 9.486497 | CATTCTACAATGTAGTGCTTCATCTAT | 57.514 | 33.333 | 18.71 | 0.00 | 35.53 | 1.98 |
6732 | 7716 | 7.928167 | CCATTCTACAATGTAGTGCTTCATCTA | 59.072 | 37.037 | 18.71 | 0.00 | 38.22 | 1.98 |
6733 | 7717 | 6.765036 | CCATTCTACAATGTAGTGCTTCATCT | 59.235 | 38.462 | 18.71 | 0.00 | 38.22 | 2.90 |
6734 | 7718 | 6.763135 | TCCATTCTACAATGTAGTGCTTCATC | 59.237 | 38.462 | 18.71 | 0.00 | 38.22 | 2.92 |
6735 | 7719 | 6.653020 | TCCATTCTACAATGTAGTGCTTCAT | 58.347 | 36.000 | 18.71 | 2.38 | 38.22 | 2.57 |
6736 | 7720 | 6.048732 | TCCATTCTACAATGTAGTGCTTCA | 57.951 | 37.500 | 18.71 | 0.00 | 38.22 | 3.02 |
6737 | 7721 | 5.525378 | CCTCCATTCTACAATGTAGTGCTTC | 59.475 | 44.000 | 18.71 | 0.00 | 38.22 | 3.86 |
6738 | 7722 | 5.189736 | TCCTCCATTCTACAATGTAGTGCTT | 59.810 | 40.000 | 18.71 | 1.75 | 38.22 | 3.91 |
6739 | 7723 | 4.716784 | TCCTCCATTCTACAATGTAGTGCT | 59.283 | 41.667 | 18.71 | 3.81 | 38.22 | 4.40 |
6740 | 7724 | 5.023533 | TCCTCCATTCTACAATGTAGTGC | 57.976 | 43.478 | 18.71 | 0.00 | 38.22 | 4.40 |
6741 | 7725 | 6.644347 | ACTTCCTCCATTCTACAATGTAGTG | 58.356 | 40.000 | 18.71 | 11.26 | 38.22 | 2.74 |
6742 | 7726 | 6.875972 | ACTTCCTCCATTCTACAATGTAGT | 57.124 | 37.500 | 18.71 | 0.00 | 38.22 | 2.73 |
6743 | 7727 | 7.707035 | GTGTACTTCCTCCATTCTACAATGTAG | 59.293 | 40.741 | 13.92 | 13.92 | 38.22 | 2.74 |
6744 | 7728 | 7.399191 | AGTGTACTTCCTCCATTCTACAATGTA | 59.601 | 37.037 | 0.00 | 0.00 | 38.22 | 2.29 |
6745 | 7729 | 6.213600 | AGTGTACTTCCTCCATTCTACAATGT | 59.786 | 38.462 | 0.00 | 0.00 | 38.22 | 2.71 |
6746 | 7730 | 6.644347 | AGTGTACTTCCTCCATTCTACAATG | 58.356 | 40.000 | 0.00 | 0.00 | 39.45 | 2.82 |
6747 | 7731 | 6.875972 | AGTGTACTTCCTCCATTCTACAAT | 57.124 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
6748 | 7732 | 6.952358 | AGTAGTGTACTTCCTCCATTCTACAA | 59.048 | 38.462 | 0.00 | 0.00 | 34.86 | 2.41 |
6749 | 7733 | 6.491383 | AGTAGTGTACTTCCTCCATTCTACA | 58.509 | 40.000 | 0.00 | 0.00 | 34.86 | 2.74 |
6750 | 7734 | 7.259161 | CAAGTAGTGTACTTCCTCCATTCTAC | 58.741 | 42.308 | 0.00 | 0.00 | 45.38 | 2.59 |
6751 | 7735 | 6.380274 | CCAAGTAGTGTACTTCCTCCATTCTA | 59.620 | 42.308 | 0.00 | 0.00 | 45.38 | 2.10 |
6752 | 7736 | 5.187967 | CCAAGTAGTGTACTTCCTCCATTCT | 59.812 | 44.000 | 0.00 | 0.00 | 45.38 | 2.40 |
6753 | 7737 | 5.420409 | CCAAGTAGTGTACTTCCTCCATTC | 58.580 | 45.833 | 0.00 | 0.00 | 45.38 | 2.67 |
6754 | 7738 | 4.225267 | CCCAAGTAGTGTACTTCCTCCATT | 59.775 | 45.833 | 0.00 | 0.00 | 45.38 | 3.16 |
6755 | 7739 | 3.775316 | CCCAAGTAGTGTACTTCCTCCAT | 59.225 | 47.826 | 0.00 | 0.00 | 45.38 | 3.41 |
6756 | 7740 | 3.170717 | CCCAAGTAGTGTACTTCCTCCA | 58.829 | 50.000 | 0.00 | 0.00 | 45.38 | 3.86 |
6757 | 7741 | 3.438183 | TCCCAAGTAGTGTACTTCCTCC | 58.562 | 50.000 | 0.00 | 0.00 | 45.38 | 4.30 |
6758 | 7742 | 4.082136 | CACTCCCAAGTAGTGTACTTCCTC | 60.082 | 50.000 | 0.00 | 0.00 | 45.38 | 3.71 |
6759 | 7743 | 3.833070 | CACTCCCAAGTAGTGTACTTCCT | 59.167 | 47.826 | 0.00 | 0.00 | 45.38 | 3.36 |
6760 | 7744 | 3.056035 | CCACTCCCAAGTAGTGTACTTCC | 60.056 | 52.174 | 0.00 | 0.00 | 45.38 | 3.46 |
6761 | 7745 | 3.056035 | CCCACTCCCAAGTAGTGTACTTC | 60.056 | 52.174 | 0.00 | 0.00 | 45.38 | 3.01 |
6763 | 7747 | 2.111255 | TCCCACTCCCAAGTAGTGTACT | 59.889 | 50.000 | 0.00 | 0.00 | 42.30 | 2.73 |
6764 | 7748 | 2.532843 | TCCCACTCCCAAGTAGTGTAC | 58.467 | 52.381 | 0.00 | 0.00 | 42.30 | 2.90 |
6765 | 7749 | 3.170717 | CTTCCCACTCCCAAGTAGTGTA | 58.829 | 50.000 | 0.00 | 0.00 | 42.30 | 2.90 |
6766 | 7750 | 1.978580 | CTTCCCACTCCCAAGTAGTGT | 59.021 | 52.381 | 0.00 | 0.00 | 42.30 | 3.55 |
6767 | 7751 | 1.279271 | CCTTCCCACTCCCAAGTAGTG | 59.721 | 57.143 | 0.00 | 0.00 | 43.26 | 2.74 |
6768 | 7752 | 1.151413 | TCCTTCCCACTCCCAAGTAGT | 59.849 | 52.381 | 0.00 | 0.00 | 33.25 | 2.73 |
6769 | 7753 | 1.952621 | TCCTTCCCACTCCCAAGTAG | 58.047 | 55.000 | 0.00 | 0.00 | 33.25 | 2.57 |
6770 | 7754 | 2.266279 | CTTCCTTCCCACTCCCAAGTA | 58.734 | 52.381 | 0.00 | 0.00 | 33.25 | 2.24 |
6771 | 7755 | 1.068121 | CTTCCTTCCCACTCCCAAGT | 58.932 | 55.000 | 0.00 | 0.00 | 35.60 | 3.16 |
6772 | 7756 | 0.329596 | CCTTCCTTCCCACTCCCAAG | 59.670 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
6773 | 7757 | 0.104144 | TCCTTCCTTCCCACTCCCAA | 60.104 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
6774 | 7758 | 0.121197 | ATCCTTCCTTCCCACTCCCA | 59.879 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
6775 | 7759 | 0.548510 | CATCCTTCCTTCCCACTCCC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6833 | 8464 | 8.016497 | TGCTTTTGTTCATTTCATTTATTCCG | 57.984 | 30.769 | 0.00 | 0.00 | 0.00 | 4.30 |
6839 | 8470 | 7.974243 | GCTTTTGCTTTTGTTCATTTCATTT | 57.026 | 28.000 | 0.00 | 0.00 | 43.35 | 2.32 |
6871 | 8519 | 0.393537 | GAGGCTTGATGGGACCACTG | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
6894 | 8542 | 0.983378 | ACTCCCCACTATGACCAGCC | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6895 | 8543 | 1.789523 | TACTCCCCACTATGACCAGC | 58.210 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6896 | 8544 | 3.375699 | AGTTACTCCCCACTATGACCAG | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6897 | 8545 | 3.245839 | TGAGTTACTCCCCACTATGACCA | 60.246 | 47.826 | 10.10 | 0.00 | 0.00 | 4.02 |
6898 | 8546 | 3.371965 | TGAGTTACTCCCCACTATGACC | 58.628 | 50.000 | 10.10 | 0.00 | 0.00 | 4.02 |
6899 | 8547 | 4.098196 | GTCTGAGTTACTCCCCACTATGAC | 59.902 | 50.000 | 10.10 | 2.54 | 0.00 | 3.06 |
6900 | 8548 | 4.017407 | AGTCTGAGTTACTCCCCACTATGA | 60.017 | 45.833 | 10.10 | 0.00 | 0.00 | 2.15 |
6901 | 8549 | 4.282496 | AGTCTGAGTTACTCCCCACTATG | 58.718 | 47.826 | 10.10 | 0.00 | 0.00 | 2.23 |
6902 | 8550 | 4.611564 | AGTCTGAGTTACTCCCCACTAT | 57.388 | 45.455 | 10.10 | 0.00 | 0.00 | 2.12 |
6903 | 8551 | 4.539293 | ACTAGTCTGAGTTACTCCCCACTA | 59.461 | 45.833 | 10.10 | 11.23 | 0.00 | 2.74 |
6904 | 8552 | 3.334280 | ACTAGTCTGAGTTACTCCCCACT | 59.666 | 47.826 | 10.10 | 10.72 | 0.00 | 4.00 |
6905 | 8553 | 3.444388 | CACTAGTCTGAGTTACTCCCCAC | 59.556 | 52.174 | 10.10 | 3.89 | 0.00 | 4.61 |
6906 | 8554 | 3.075582 | ACACTAGTCTGAGTTACTCCCCA | 59.924 | 47.826 | 10.10 | 0.00 | 0.00 | 4.96 |
6907 | 8555 | 3.695556 | GACACTAGTCTGAGTTACTCCCC | 59.304 | 52.174 | 10.10 | 0.00 | 41.64 | 4.81 |
6908 | 8556 | 4.333690 | TGACACTAGTCTGAGTTACTCCC | 58.666 | 47.826 | 10.10 | 0.00 | 45.20 | 4.30 |
6909 | 8557 | 5.416326 | ACATGACACTAGTCTGAGTTACTCC | 59.584 | 44.000 | 10.10 | 0.00 | 45.20 | 3.85 |
6910 | 8558 | 6.503589 | ACATGACACTAGTCTGAGTTACTC | 57.496 | 41.667 | 5.27 | 5.27 | 45.20 | 2.59 |
6911 | 8559 | 9.854668 | ATATACATGACACTAGTCTGAGTTACT | 57.145 | 33.333 | 0.00 | 0.00 | 45.20 | 2.24 |
6912 | 8560 | 9.885934 | CATATACATGACACTAGTCTGAGTTAC | 57.114 | 37.037 | 0.00 | 0.00 | 45.20 | 2.50 |
6913 | 8561 | 9.847224 | TCATATACATGACACTAGTCTGAGTTA | 57.153 | 33.333 | 0.00 | 0.00 | 45.20 | 2.24 |
6914 | 8562 | 8.753497 | TCATATACATGACACTAGTCTGAGTT | 57.247 | 34.615 | 0.00 | 0.00 | 45.20 | 3.01 |
6934 | 8582 | 9.643735 | AGGTAGTAACTTAAGCTAGTGTCATAT | 57.356 | 33.333 | 1.29 | 0.00 | 0.00 | 1.78 |
6935 | 8583 | 9.471702 | AAGGTAGTAACTTAAGCTAGTGTCATA | 57.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
6936 | 8584 | 7.957992 | AGGTAGTAACTTAAGCTAGTGTCAT | 57.042 | 36.000 | 1.29 | 0.00 | 0.00 | 3.06 |
6937 | 8585 | 7.449395 | TGAAGGTAGTAACTTAAGCTAGTGTCA | 59.551 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
6938 | 8586 | 7.824672 | TGAAGGTAGTAACTTAAGCTAGTGTC | 58.175 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
6939 | 8587 | 7.771927 | TGAAGGTAGTAACTTAAGCTAGTGT | 57.228 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
6943 | 8591 | 9.760077 | GCATTATGAAGGTAGTAACTTAAGCTA | 57.240 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
6944 | 8592 | 8.265055 | TGCATTATGAAGGTAGTAACTTAAGCT | 58.735 | 33.333 | 0.00 | 0.00 | 0.00 | 3.74 |
6945 | 8593 | 8.433421 | TGCATTATGAAGGTAGTAACTTAAGC | 57.567 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
6948 | 8596 | 9.953565 | ACTTTGCATTATGAAGGTAGTAACTTA | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
6949 | 8597 | 8.863872 | ACTTTGCATTATGAAGGTAGTAACTT | 57.136 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
6950 | 8598 | 9.953565 | TTACTTTGCATTATGAAGGTAGTAACT | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
6951 | 8599 | 9.983804 | GTTACTTTGCATTATGAAGGTAGTAAC | 57.016 | 33.333 | 13.90 | 13.90 | 38.55 | 2.50 |
6952 | 8600 | 9.727859 | TGTTACTTTGCATTATGAAGGTAGTAA | 57.272 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
6953 | 8601 | 9.899661 | ATGTTACTTTGCATTATGAAGGTAGTA | 57.100 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
6954 | 8602 | 8.807948 | ATGTTACTTTGCATTATGAAGGTAGT | 57.192 | 30.769 | 0.00 | 0.00 | 0.00 | 2.73 |
7015 | 8663 | 9.521503 | CGATTTTCAAGACAAGATGAGTCTATA | 57.478 | 33.333 | 0.00 | 0.00 | 45.11 | 1.31 |
7016 | 8664 | 7.010923 | GCGATTTTCAAGACAAGATGAGTCTAT | 59.989 | 37.037 | 0.00 | 0.00 | 45.11 | 1.98 |
7017 | 8665 | 6.311445 | GCGATTTTCAAGACAAGATGAGTCTA | 59.689 | 38.462 | 0.00 | 0.00 | 45.11 | 2.59 |
7019 | 8667 | 5.121454 | AGCGATTTTCAAGACAAGATGAGTC | 59.879 | 40.000 | 0.00 | 0.00 | 36.26 | 3.36 |
7020 | 8668 | 4.999950 | AGCGATTTTCAAGACAAGATGAGT | 59.000 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
7021 | 8669 | 5.542616 | AGCGATTTTCAAGACAAGATGAG | 57.457 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
7022 | 8670 | 6.595326 | ACATAGCGATTTTCAAGACAAGATGA | 59.405 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
7023 | 8671 | 6.779117 | ACATAGCGATTTTCAAGACAAGATG | 58.221 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
7024 | 8672 | 6.992063 | ACATAGCGATTTTCAAGACAAGAT | 57.008 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
7025 | 8673 | 6.801539 | AACATAGCGATTTTCAAGACAAGA | 57.198 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
7026 | 8674 | 7.518161 | TGTAACATAGCGATTTTCAAGACAAG | 58.482 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
7027 | 8675 | 7.172532 | ACTGTAACATAGCGATTTTCAAGACAA | 59.827 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
7028 | 8676 | 6.649141 | ACTGTAACATAGCGATTTTCAAGACA | 59.351 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
7029 | 8677 | 7.061752 | ACTGTAACATAGCGATTTTCAAGAC | 57.938 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7030 | 8678 | 8.653338 | GTTACTGTAACATAGCGATTTTCAAGA | 58.347 | 33.333 | 22.30 | 0.00 | 38.52 | 3.02 |
7031 | 8679 | 8.440059 | TGTTACTGTAACATAGCGATTTTCAAG | 58.560 | 33.333 | 25.14 | 0.00 | 43.23 | 3.02 |
7032 | 8680 | 8.312896 | TGTTACTGTAACATAGCGATTTTCAA | 57.687 | 30.769 | 25.14 | 2.12 | 43.23 | 2.69 |
7033 | 8681 | 7.892778 | TGTTACTGTAACATAGCGATTTTCA | 57.107 | 32.000 | 25.14 | 2.58 | 43.23 | 2.69 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.