Multiple sequence alignment - TraesCS7A01G303700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G303700 | chr7A | 100.000 | 3545 | 0 | 0 | 1 | 3545 | 427556028 | 427559572 | 0.000000e+00 | 6547 |
1 | TraesCS7A01G303700 | chr7A | 87.908 | 736 | 85 | 4 | 2811 | 3545 | 189712768 | 189713500 | 0.000000e+00 | 863 |
2 | TraesCS7A01G303700 | chr7A | 98.201 | 278 | 5 | 0 | 500 | 777 | 14507792 | 14508069 | 1.480000e-133 | 486 |
3 | TraesCS7A01G303700 | chr7A | 98.175 | 274 | 5 | 0 | 500 | 773 | 726392571 | 726392298 | 2.480000e-131 | 479 |
4 | TraesCS7A01G303700 | chr7D | 98.018 | 2018 | 36 | 2 | 796 | 2810 | 379090062 | 379092078 | 0.000000e+00 | 3502 |
5 | TraesCS7A01G303700 | chr7D | 90.950 | 221 | 15 | 2 | 275 | 491 | 379089847 | 379090066 | 3.460000e-75 | 292 |
6 | TraesCS7A01G303700 | chr2A | 96.729 | 2018 | 62 | 2 | 796 | 2810 | 338545549 | 338547565 | 0.000000e+00 | 3358 |
7 | TraesCS7A01G303700 | chr2A | 97.143 | 280 | 8 | 0 | 498 | 777 | 16594877 | 16594598 | 1.150000e-129 | 473 |
8 | TraesCS7A01G303700 | chr2A | 95.890 | 292 | 10 | 2 | 489 | 780 | 5434262 | 5434551 | 4.140000e-129 | 472 |
9 | TraesCS7A01G303700 | chr2A | 72.757 | 602 | 125 | 28 | 1870 | 2462 | 69314324 | 69314895 | 2.190000e-37 | 167 |
10 | TraesCS7A01G303700 | chr7B | 96.683 | 1990 | 51 | 8 | 774 | 2748 | 374528816 | 374530805 | 0.000000e+00 | 3295 |
11 | TraesCS7A01G303700 | chr7B | 89.986 | 739 | 70 | 4 | 2809 | 3545 | 147527509 | 147526773 | 0.000000e+00 | 952 |
12 | TraesCS7A01G303700 | chr7B | 81.417 | 748 | 122 | 14 | 2811 | 3545 | 735910250 | 735910993 | 2.360000e-166 | 595 |
13 | TraesCS7A01G303700 | chr7B | 90.164 | 305 | 29 | 1 | 175 | 479 | 374528226 | 374528529 | 2.560000e-106 | 396 |
14 | TraesCS7A01G303700 | chr5B | 88.027 | 735 | 85 | 3 | 2811 | 3545 | 682461490 | 682462221 | 0.000000e+00 | 867 |
15 | TraesCS7A01G303700 | chr2B | 86.395 | 735 | 94 | 4 | 2811 | 3545 | 151622642 | 151621914 | 0.000000e+00 | 798 |
16 | TraesCS7A01G303700 | chr2B | 87.367 | 657 | 80 | 3 | 2811 | 3467 | 772719576 | 772720229 | 0.000000e+00 | 750 |
17 | TraesCS7A01G303700 | chr2B | 81.175 | 749 | 125 | 14 | 2806 | 3545 | 199463456 | 199464197 | 3.940000e-164 | 588 |
18 | TraesCS7A01G303700 | chr2B | 97.569 | 288 | 5 | 2 | 489 | 775 | 134472686 | 134472972 | 3.180000e-135 | 492 |
19 | TraesCS7A01G303700 | chr2B | 71.721 | 831 | 191 | 38 | 1680 | 2485 | 105896082 | 105896893 | 3.610000e-45 | 193 |
20 | TraesCS7A01G303700 | chr4B | 82.703 | 740 | 123 | 5 | 2810 | 3545 | 16381146 | 16380408 | 0.000000e+00 | 652 |
21 | TraesCS7A01G303700 | chr4B | 98.175 | 274 | 5 | 0 | 499 | 772 | 161619495 | 161619768 | 2.480000e-131 | 479 |
22 | TraesCS7A01G303700 | chr3D | 81.358 | 751 | 118 | 17 | 2811 | 3545 | 520284284 | 520285028 | 3.050000e-165 | 592 |
23 | TraesCS7A01G303700 | chr5A | 98.540 | 274 | 4 | 0 | 500 | 773 | 618474658 | 618474385 | 5.320000e-133 | 484 |
24 | TraesCS7A01G303700 | chr4A | 97.857 | 280 | 6 | 0 | 498 | 777 | 492322955 | 492322676 | 5.320000e-133 | 484 |
25 | TraesCS7A01G303700 | chr1B | 95.819 | 287 | 12 | 0 | 498 | 784 | 681794987 | 681794701 | 6.930000e-127 | 464 |
26 | TraesCS7A01G303700 | chrUn | 76.543 | 243 | 48 | 9 | 2184 | 2420 | 114234851 | 114235090 | 1.340000e-24 | 124 |
27 | TraesCS7A01G303700 | chr6A | 76.496 | 234 | 46 | 9 | 2193 | 2420 | 50408419 | 50408189 | 6.220000e-23 | 119 |
28 | TraesCS7A01G303700 | chr6A | 76.496 | 234 | 46 | 9 | 2193 | 2420 | 50465014 | 50464784 | 6.220000e-23 | 119 |
29 | TraesCS7A01G303700 | chr6A | 76.496 | 234 | 46 | 9 | 2193 | 2420 | 50865009 | 50864779 | 6.220000e-23 | 119 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G303700 | chr7A | 427556028 | 427559572 | 3544 | False | 6547.0 | 6547 | 100.0000 | 1 | 3545 | 1 | chr7A.!!$F3 | 3544 |
1 | TraesCS7A01G303700 | chr7A | 189712768 | 189713500 | 732 | False | 863.0 | 863 | 87.9080 | 2811 | 3545 | 1 | chr7A.!!$F2 | 734 |
2 | TraesCS7A01G303700 | chr7D | 379089847 | 379092078 | 2231 | False | 1897.0 | 3502 | 94.4840 | 275 | 2810 | 2 | chr7D.!!$F1 | 2535 |
3 | TraesCS7A01G303700 | chr2A | 338545549 | 338547565 | 2016 | False | 3358.0 | 3358 | 96.7290 | 796 | 2810 | 1 | chr2A.!!$F3 | 2014 |
4 | TraesCS7A01G303700 | chr7B | 374528226 | 374530805 | 2579 | False | 1845.5 | 3295 | 93.4235 | 175 | 2748 | 2 | chr7B.!!$F2 | 2573 |
5 | TraesCS7A01G303700 | chr7B | 147526773 | 147527509 | 736 | True | 952.0 | 952 | 89.9860 | 2809 | 3545 | 1 | chr7B.!!$R1 | 736 |
6 | TraesCS7A01G303700 | chr7B | 735910250 | 735910993 | 743 | False | 595.0 | 595 | 81.4170 | 2811 | 3545 | 1 | chr7B.!!$F1 | 734 |
7 | TraesCS7A01G303700 | chr5B | 682461490 | 682462221 | 731 | False | 867.0 | 867 | 88.0270 | 2811 | 3545 | 1 | chr5B.!!$F1 | 734 |
8 | TraesCS7A01G303700 | chr2B | 151621914 | 151622642 | 728 | True | 798.0 | 798 | 86.3950 | 2811 | 3545 | 1 | chr2B.!!$R1 | 734 |
9 | TraesCS7A01G303700 | chr2B | 772719576 | 772720229 | 653 | False | 750.0 | 750 | 87.3670 | 2811 | 3467 | 1 | chr2B.!!$F4 | 656 |
10 | TraesCS7A01G303700 | chr2B | 199463456 | 199464197 | 741 | False | 588.0 | 588 | 81.1750 | 2806 | 3545 | 1 | chr2B.!!$F3 | 739 |
11 | TraesCS7A01G303700 | chr4B | 16380408 | 16381146 | 738 | True | 652.0 | 652 | 82.7030 | 2810 | 3545 | 1 | chr4B.!!$R1 | 735 |
12 | TraesCS7A01G303700 | chr3D | 520284284 | 520285028 | 744 | False | 592.0 | 592 | 81.3580 | 2811 | 3545 | 1 | chr3D.!!$F1 | 734 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
153 | 154 | 0.034670 | GGAGCAGATGAGTTTGGGCT | 60.035 | 55.0 | 0.00 | 0.0 | 0.0 | 5.19 | F |
786 | 1059 | 0.179048 | TGCCCTTATGTCATGCCTCG | 60.179 | 55.0 | 0.00 | 0.0 | 0.0 | 4.63 | F |
2383 | 2659 | 0.243907 | GCTGCACCTCGAGTACTTCA | 59.756 | 55.0 | 12.31 | 1.2 | 0.0 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1980 | 2256 | 0.465097 | CCCTTAGCCTGTCCTGCATG | 60.465 | 60.0 | 0.00 | 0.0 | 0.0 | 4.06 | R |
2533 | 2809 | 0.247460 | CCTGTCGATCAACCTGAGCA | 59.753 | 55.0 | 0.00 | 0.0 | 31.1 | 4.26 | R |
3469 | 3784 | 0.179056 | GGTGGCCTAGATTTGCGCTA | 60.179 | 55.0 | 9.73 | 0.0 | 0.0 | 4.26 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
49 | 50 | 9.810231 | CAAATGATTTAAAATTTGTAGCACACC | 57.190 | 29.630 | 13.66 | 0.00 | 38.43 | 4.16 |
50 | 51 | 9.777297 | AAATGATTTAAAATTTGTAGCACACCT | 57.223 | 25.926 | 0.00 | 0.00 | 0.00 | 4.00 |
51 | 52 | 9.777297 | AATGATTTAAAATTTGTAGCACACCTT | 57.223 | 25.926 | 0.00 | 0.00 | 0.00 | 3.50 |
58 | 59 | 6.812879 | AATTTGTAGCACACCTTAAGTACC | 57.187 | 37.500 | 0.97 | 0.00 | 0.00 | 3.34 |
59 | 60 | 4.959560 | TTGTAGCACACCTTAAGTACCA | 57.040 | 40.909 | 0.97 | 0.00 | 0.00 | 3.25 |
60 | 61 | 4.959560 | TGTAGCACACCTTAAGTACCAA | 57.040 | 40.909 | 0.97 | 0.00 | 0.00 | 3.67 |
61 | 62 | 5.293319 | TGTAGCACACCTTAAGTACCAAA | 57.707 | 39.130 | 0.97 | 0.00 | 0.00 | 3.28 |
62 | 63 | 5.871834 | TGTAGCACACCTTAAGTACCAAAT | 58.128 | 37.500 | 0.97 | 0.00 | 0.00 | 2.32 |
63 | 64 | 6.300703 | TGTAGCACACCTTAAGTACCAAATT | 58.699 | 36.000 | 0.97 | 0.00 | 0.00 | 1.82 |
64 | 65 | 7.451732 | TGTAGCACACCTTAAGTACCAAATTA | 58.548 | 34.615 | 0.97 | 0.00 | 0.00 | 1.40 |
65 | 66 | 8.104566 | TGTAGCACACCTTAAGTACCAAATTAT | 58.895 | 33.333 | 0.97 | 0.00 | 0.00 | 1.28 |
66 | 67 | 7.625828 | AGCACACCTTAAGTACCAAATTATC | 57.374 | 36.000 | 0.97 | 0.00 | 0.00 | 1.75 |
67 | 68 | 7.402862 | AGCACACCTTAAGTACCAAATTATCT | 58.597 | 34.615 | 0.97 | 0.00 | 0.00 | 1.98 |
68 | 69 | 7.888546 | AGCACACCTTAAGTACCAAATTATCTT | 59.111 | 33.333 | 0.97 | 0.00 | 0.00 | 2.40 |
69 | 70 | 8.182227 | GCACACCTTAAGTACCAAATTATCTTC | 58.818 | 37.037 | 0.97 | 0.00 | 0.00 | 2.87 |
70 | 71 | 8.674607 | CACACCTTAAGTACCAAATTATCTTCC | 58.325 | 37.037 | 0.97 | 0.00 | 0.00 | 3.46 |
71 | 72 | 8.387813 | ACACCTTAAGTACCAAATTATCTTCCA | 58.612 | 33.333 | 0.97 | 0.00 | 0.00 | 3.53 |
72 | 73 | 9.408648 | CACCTTAAGTACCAAATTATCTTCCAT | 57.591 | 33.333 | 0.97 | 0.00 | 0.00 | 3.41 |
73 | 74 | 9.408648 | ACCTTAAGTACCAAATTATCTTCCATG | 57.591 | 33.333 | 0.97 | 0.00 | 0.00 | 3.66 |
74 | 75 | 9.627123 | CCTTAAGTACCAAATTATCTTCCATGA | 57.373 | 33.333 | 0.97 | 0.00 | 0.00 | 3.07 |
133 | 134 | 8.755696 | TGTTTTTATGAATTTTCCCTTCATCG | 57.244 | 30.769 | 2.06 | 0.00 | 41.28 | 3.84 |
134 | 135 | 7.816995 | TGTTTTTATGAATTTTCCCTTCATCGG | 59.183 | 33.333 | 2.06 | 0.00 | 41.28 | 4.18 |
135 | 136 | 6.463995 | TTTATGAATTTTCCCTTCATCGGG | 57.536 | 37.500 | 2.06 | 0.00 | 41.28 | 5.14 |
143 | 144 | 3.302375 | CCTTCATCGGGAGCAGATG | 57.698 | 57.895 | 0.17 | 0.17 | 44.95 | 2.90 |
146 | 147 | 3.214023 | TCATCGGGAGCAGATGAGT | 57.786 | 52.632 | 4.95 | 0.00 | 46.52 | 3.41 |
147 | 148 | 1.489481 | TCATCGGGAGCAGATGAGTT | 58.511 | 50.000 | 4.95 | 0.00 | 46.52 | 3.01 |
148 | 149 | 1.833630 | TCATCGGGAGCAGATGAGTTT | 59.166 | 47.619 | 4.95 | 0.00 | 46.52 | 2.66 |
149 | 150 | 1.938577 | CATCGGGAGCAGATGAGTTTG | 59.061 | 52.381 | 0.28 | 0.00 | 46.09 | 2.93 |
150 | 151 | 0.250234 | TCGGGAGCAGATGAGTTTGG | 59.750 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
151 | 152 | 0.745845 | CGGGAGCAGATGAGTTTGGG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 4.12 |
152 | 153 | 1.034292 | GGGAGCAGATGAGTTTGGGC | 61.034 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
153 | 154 | 0.034670 | GGAGCAGATGAGTTTGGGCT | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
154 | 155 | 1.615384 | GGAGCAGATGAGTTTGGGCTT | 60.615 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
155 | 156 | 2.356125 | GGAGCAGATGAGTTTGGGCTTA | 60.356 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
156 | 157 | 2.941720 | GAGCAGATGAGTTTGGGCTTAG | 59.058 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
157 | 158 | 2.573462 | AGCAGATGAGTTTGGGCTTAGA | 59.427 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
158 | 159 | 3.009473 | AGCAGATGAGTTTGGGCTTAGAA | 59.991 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
159 | 160 | 3.758554 | GCAGATGAGTTTGGGCTTAGAAA | 59.241 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
160 | 161 | 4.400567 | GCAGATGAGTTTGGGCTTAGAAAT | 59.599 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
161 | 162 | 5.678107 | GCAGATGAGTTTGGGCTTAGAAATG | 60.678 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
162 | 163 | 5.649395 | CAGATGAGTTTGGGCTTAGAAATGA | 59.351 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
163 | 164 | 6.151648 | CAGATGAGTTTGGGCTTAGAAATGAA | 59.848 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
164 | 165 | 6.894103 | AGATGAGTTTGGGCTTAGAAATGAAT | 59.106 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
165 | 166 | 8.055181 | AGATGAGTTTGGGCTTAGAAATGAATA | 58.945 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
166 | 167 | 8.773033 | ATGAGTTTGGGCTTAGAAATGAATAT | 57.227 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
167 | 168 | 8.593945 | TGAGTTTGGGCTTAGAAATGAATATT | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
168 | 169 | 8.686334 | TGAGTTTGGGCTTAGAAATGAATATTC | 58.314 | 33.333 | 8.60 | 8.60 | 0.00 | 1.75 |
169 | 170 | 7.707104 | AGTTTGGGCTTAGAAATGAATATTCG | 58.293 | 34.615 | 10.80 | 0.00 | 32.04 | 3.34 |
170 | 171 | 7.556275 | AGTTTGGGCTTAGAAATGAATATTCGA | 59.444 | 33.333 | 10.80 | 1.04 | 32.04 | 3.71 |
171 | 172 | 7.873719 | TTGGGCTTAGAAATGAATATTCGAA | 57.126 | 32.000 | 10.80 | 0.00 | 32.04 | 3.71 |
172 | 173 | 8.463930 | TTGGGCTTAGAAATGAATATTCGAAT | 57.536 | 30.769 | 16.15 | 16.15 | 32.04 | 3.34 |
173 | 174 | 8.099364 | TGGGCTTAGAAATGAATATTCGAATC | 57.901 | 34.615 | 15.25 | 1.65 | 32.04 | 2.52 |
221 | 222 | 4.923516 | ACATAGCAGATTCTATGGGCAT | 57.076 | 40.909 | 13.36 | 0.00 | 46.27 | 4.40 |
244 | 245 | 8.344098 | GCATTTTCCAGAATCTTGATTCTAGAG | 58.656 | 37.037 | 21.10 | 14.51 | 38.73 | 2.43 |
264 | 265 | 5.012893 | AGAGAATCATGTGGGAAAAGAACC | 58.987 | 41.667 | 0.00 | 0.00 | 37.82 | 3.62 |
265 | 266 | 4.089361 | AGAATCATGTGGGAAAAGAACCC | 58.911 | 43.478 | 0.00 | 0.00 | 46.87 | 4.11 |
278 | 279 | 3.512219 | AAGAACCCGACCCAAATGTTA | 57.488 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
297 | 298 | 7.683437 | ATGTTAACCTCAAAGGCTAGTAAAC | 57.317 | 36.000 | 2.48 | 0.00 | 39.63 | 2.01 |
367 | 368 | 1.613437 | CCATTGTTGCCCTCGAAGTTT | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
432 | 433 | 3.305608 | GGGCAGAACTTCATCAGTTTTGG | 60.306 | 47.826 | 7.22 | 0.00 | 46.53 | 3.28 |
456 | 457 | 7.879677 | TGGTATTAAGCATCATGAGGTTATCTG | 59.120 | 37.037 | 9.42 | 0.00 | 0.00 | 2.90 |
498 | 771 | 8.677300 | TGAATAAAAAGAGCGAATTAGCAGATT | 58.323 | 29.630 | 13.26 | 1.67 | 40.15 | 2.40 |
501 | 774 | 6.610741 | AAAAGAGCGAATTAGCAGATTAGG | 57.389 | 37.500 | 13.26 | 0.00 | 40.15 | 2.69 |
502 | 775 | 4.264460 | AGAGCGAATTAGCAGATTAGGG | 57.736 | 45.455 | 13.26 | 0.00 | 40.15 | 3.53 |
503 | 776 | 2.739379 | GAGCGAATTAGCAGATTAGGGC | 59.261 | 50.000 | 13.26 | 0.00 | 40.15 | 5.19 |
504 | 777 | 2.104792 | AGCGAATTAGCAGATTAGGGCA | 59.895 | 45.455 | 13.26 | 0.00 | 40.15 | 5.36 |
505 | 778 | 3.077359 | GCGAATTAGCAGATTAGGGCAT | 58.923 | 45.455 | 5.59 | 0.00 | 37.05 | 4.40 |
506 | 779 | 3.120060 | GCGAATTAGCAGATTAGGGCATG | 60.120 | 47.826 | 5.59 | 0.00 | 37.05 | 4.06 |
507 | 780 | 4.067896 | CGAATTAGCAGATTAGGGCATGT | 58.932 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
508 | 781 | 5.237815 | CGAATTAGCAGATTAGGGCATGTA | 58.762 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
509 | 782 | 5.120830 | CGAATTAGCAGATTAGGGCATGTAC | 59.879 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
510 | 783 | 5.567037 | ATTAGCAGATTAGGGCATGTACA | 57.433 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
511 | 784 | 3.931907 | AGCAGATTAGGGCATGTACAA | 57.068 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
512 | 785 | 4.443978 | AGCAGATTAGGGCATGTACAAT | 57.556 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
513 | 786 | 4.139786 | AGCAGATTAGGGCATGTACAATG | 58.860 | 43.478 | 0.00 | 0.12 | 0.00 | 2.82 |
514 | 787 | 3.254166 | GCAGATTAGGGCATGTACAATGG | 59.746 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
515 | 788 | 4.464008 | CAGATTAGGGCATGTACAATGGT | 58.536 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
516 | 789 | 4.889409 | CAGATTAGGGCATGTACAATGGTT | 59.111 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
517 | 790 | 5.009010 | CAGATTAGGGCATGTACAATGGTTC | 59.991 | 44.000 | 0.00 | 0.00 | 0.00 | 3.62 |
518 | 791 | 4.584638 | TTAGGGCATGTACAATGGTTCT | 57.415 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
519 | 792 | 5.702065 | TTAGGGCATGTACAATGGTTCTA | 57.298 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
520 | 793 | 4.796110 | AGGGCATGTACAATGGTTCTAT | 57.204 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
521 | 794 | 4.718961 | AGGGCATGTACAATGGTTCTATC | 58.281 | 43.478 | 0.00 | 0.00 | 0.00 | 2.08 |
522 | 795 | 4.413520 | AGGGCATGTACAATGGTTCTATCT | 59.586 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
523 | 796 | 5.103940 | AGGGCATGTACAATGGTTCTATCTT | 60.104 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
524 | 797 | 6.101150 | AGGGCATGTACAATGGTTCTATCTTA | 59.899 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
525 | 798 | 6.770785 | GGGCATGTACAATGGTTCTATCTTAA | 59.229 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
526 | 799 | 7.041098 | GGGCATGTACAATGGTTCTATCTTAAG | 60.041 | 40.741 | 0.00 | 0.00 | 0.00 | 1.85 |
527 | 800 | 7.715249 | GGCATGTACAATGGTTCTATCTTAAGA | 59.285 | 37.037 | 7.82 | 7.82 | 0.00 | 2.10 |
528 | 801 | 8.768955 | GCATGTACAATGGTTCTATCTTAAGAG | 58.231 | 37.037 | 11.53 | 0.00 | 0.00 | 2.85 |
529 | 802 | 9.823647 | CATGTACAATGGTTCTATCTTAAGAGT | 57.176 | 33.333 | 11.53 | 2.01 | 0.00 | 3.24 |
530 | 803 | 9.823647 | ATGTACAATGGTTCTATCTTAAGAGTG | 57.176 | 33.333 | 11.53 | 6.28 | 0.00 | 3.51 |
531 | 804 | 7.764443 | TGTACAATGGTTCTATCTTAAGAGTGC | 59.236 | 37.037 | 11.53 | 3.75 | 0.00 | 4.40 |
532 | 805 | 6.116126 | ACAATGGTTCTATCTTAAGAGTGCC | 58.884 | 40.000 | 11.53 | 8.87 | 0.00 | 5.01 |
533 | 806 | 5.957771 | ATGGTTCTATCTTAAGAGTGCCA | 57.042 | 39.130 | 11.53 | 13.60 | 32.26 | 4.92 |
534 | 807 | 5.086104 | TGGTTCTATCTTAAGAGTGCCAC | 57.914 | 43.478 | 11.53 | 4.06 | 0.00 | 5.01 |
535 | 808 | 4.530553 | TGGTTCTATCTTAAGAGTGCCACA | 59.469 | 41.667 | 11.53 | 3.77 | 0.00 | 4.17 |
536 | 809 | 5.189736 | TGGTTCTATCTTAAGAGTGCCACAT | 59.810 | 40.000 | 11.53 | 0.00 | 0.00 | 3.21 |
537 | 810 | 6.382859 | TGGTTCTATCTTAAGAGTGCCACATA | 59.617 | 38.462 | 11.53 | 0.00 | 0.00 | 2.29 |
538 | 811 | 6.926272 | GGTTCTATCTTAAGAGTGCCACATAG | 59.074 | 42.308 | 11.53 | 5.39 | 0.00 | 2.23 |
539 | 812 | 6.656632 | TCTATCTTAAGAGTGCCACATAGG | 57.343 | 41.667 | 11.53 | 0.00 | 41.84 | 2.57 |
540 | 813 | 6.373759 | TCTATCTTAAGAGTGCCACATAGGA | 58.626 | 40.000 | 11.53 | 0.00 | 41.22 | 2.94 |
541 | 814 | 7.013220 | TCTATCTTAAGAGTGCCACATAGGAT | 58.987 | 38.462 | 11.53 | 1.94 | 41.22 | 3.24 |
542 | 815 | 8.170730 | TCTATCTTAAGAGTGCCACATAGGATA | 58.829 | 37.037 | 11.53 | 2.95 | 41.22 | 2.59 |
543 | 816 | 7.618019 | ATCTTAAGAGTGCCACATAGGATAA | 57.382 | 36.000 | 11.53 | 0.00 | 41.22 | 1.75 |
544 | 817 | 7.432148 | TCTTAAGAGTGCCACATAGGATAAA | 57.568 | 36.000 | 0.00 | 0.00 | 41.22 | 1.40 |
545 | 818 | 8.034313 | TCTTAAGAGTGCCACATAGGATAAAT | 57.966 | 34.615 | 0.00 | 0.00 | 41.22 | 1.40 |
546 | 819 | 7.933577 | TCTTAAGAGTGCCACATAGGATAAATG | 59.066 | 37.037 | 0.00 | 0.00 | 41.22 | 2.32 |
547 | 820 | 5.894298 | AGAGTGCCACATAGGATAAATGA | 57.106 | 39.130 | 0.00 | 0.00 | 41.22 | 2.57 |
548 | 821 | 6.445451 | AGAGTGCCACATAGGATAAATGAT | 57.555 | 37.500 | 0.00 | 0.00 | 41.22 | 2.45 |
549 | 822 | 6.236409 | AGAGTGCCACATAGGATAAATGATG | 58.764 | 40.000 | 0.00 | 0.00 | 41.22 | 3.07 |
550 | 823 | 6.043590 | AGAGTGCCACATAGGATAAATGATGA | 59.956 | 38.462 | 0.00 | 0.00 | 41.22 | 2.92 |
551 | 824 | 6.236409 | AGTGCCACATAGGATAAATGATGAG | 58.764 | 40.000 | 0.00 | 0.00 | 41.22 | 2.90 |
552 | 825 | 5.413833 | GTGCCACATAGGATAAATGATGAGG | 59.586 | 44.000 | 0.00 | 0.00 | 41.22 | 3.86 |
553 | 826 | 5.073554 | TGCCACATAGGATAAATGATGAGGT | 59.926 | 40.000 | 0.00 | 0.00 | 41.22 | 3.85 |
554 | 827 | 5.413833 | GCCACATAGGATAAATGATGAGGTG | 59.586 | 44.000 | 0.00 | 0.00 | 41.22 | 4.00 |
555 | 828 | 5.942236 | CCACATAGGATAAATGATGAGGTGG | 59.058 | 44.000 | 0.00 | 0.00 | 41.22 | 4.61 |
556 | 829 | 6.239973 | CCACATAGGATAAATGATGAGGTGGA | 60.240 | 42.308 | 0.00 | 0.00 | 42.55 | 4.02 |
557 | 830 | 6.877855 | CACATAGGATAAATGATGAGGTGGAG | 59.122 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
558 | 831 | 4.989875 | AGGATAAATGATGAGGTGGAGG | 57.010 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
559 | 832 | 4.570926 | AGGATAAATGATGAGGTGGAGGA | 58.429 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
560 | 833 | 4.596643 | AGGATAAATGATGAGGTGGAGGAG | 59.403 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
561 | 834 | 4.594920 | GGATAAATGATGAGGTGGAGGAGA | 59.405 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
562 | 835 | 5.279910 | GGATAAATGATGAGGTGGAGGAGAG | 60.280 | 48.000 | 0.00 | 0.00 | 0.00 | 3.20 |
563 | 836 | 3.411454 | AATGATGAGGTGGAGGAGAGA | 57.589 | 47.619 | 0.00 | 0.00 | 0.00 | 3.10 |
564 | 837 | 2.450867 | TGATGAGGTGGAGGAGAGAG | 57.549 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
565 | 838 | 1.925959 | TGATGAGGTGGAGGAGAGAGA | 59.074 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
566 | 839 | 2.313041 | TGATGAGGTGGAGGAGAGAGAA | 59.687 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
567 | 840 | 3.245766 | TGATGAGGTGGAGGAGAGAGAAA | 60.246 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
568 | 841 | 3.481559 | TGAGGTGGAGGAGAGAGAAAT | 57.518 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
569 | 842 | 3.370104 | TGAGGTGGAGGAGAGAGAAATC | 58.630 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
570 | 843 | 3.245766 | TGAGGTGGAGGAGAGAGAAATCA | 60.246 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
571 | 844 | 3.966665 | GAGGTGGAGGAGAGAGAAATCAT | 59.033 | 47.826 | 0.00 | 0.00 | 0.00 | 2.45 |
572 | 845 | 5.144100 | GAGGTGGAGGAGAGAGAAATCATA | 58.856 | 45.833 | 0.00 | 0.00 | 0.00 | 2.15 |
573 | 846 | 5.533112 | AGGTGGAGGAGAGAGAAATCATAA | 58.467 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
574 | 847 | 5.602145 | AGGTGGAGGAGAGAGAAATCATAAG | 59.398 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
575 | 848 | 5.600484 | GGTGGAGGAGAGAGAAATCATAAGA | 59.400 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
576 | 849 | 6.098982 | GGTGGAGGAGAGAGAAATCATAAGAA | 59.901 | 42.308 | 0.00 | 0.00 | 0.00 | 2.52 |
577 | 850 | 7.365117 | GGTGGAGGAGAGAGAAATCATAAGAAA | 60.365 | 40.741 | 0.00 | 0.00 | 0.00 | 2.52 |
578 | 851 | 8.043710 | GTGGAGGAGAGAGAAATCATAAGAAAA | 58.956 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
579 | 852 | 8.263640 | TGGAGGAGAGAGAAATCATAAGAAAAG | 58.736 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
580 | 853 | 7.714813 | GGAGGAGAGAGAAATCATAAGAAAAGG | 59.285 | 40.741 | 0.00 | 0.00 | 0.00 | 3.11 |
581 | 854 | 7.053498 | AGGAGAGAGAAATCATAAGAAAAGGC | 58.947 | 38.462 | 0.00 | 0.00 | 0.00 | 4.35 |
582 | 855 | 7.053498 | GGAGAGAGAAATCATAAGAAAAGGCT | 58.947 | 38.462 | 0.00 | 0.00 | 0.00 | 4.58 |
583 | 856 | 7.555914 | GGAGAGAGAAATCATAAGAAAAGGCTT | 59.444 | 37.037 | 0.00 | 0.00 | 0.00 | 4.35 |
584 | 857 | 8.278729 | AGAGAGAAATCATAAGAAAAGGCTTG | 57.721 | 34.615 | 0.00 | 0.00 | 0.00 | 4.01 |
585 | 858 | 7.887495 | AGAGAGAAATCATAAGAAAAGGCTTGT | 59.113 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
586 | 859 | 8.049655 | AGAGAAATCATAAGAAAAGGCTTGTC | 57.950 | 34.615 | 9.51 | 9.51 | 0.00 | 3.18 |
587 | 860 | 7.887495 | AGAGAAATCATAAGAAAAGGCTTGTCT | 59.113 | 33.333 | 14.33 | 14.33 | 0.00 | 3.41 |
588 | 861 | 8.414629 | AGAAATCATAAGAAAAGGCTTGTCTT | 57.585 | 30.769 | 30.04 | 30.04 | 35.77 | 3.01 |
589 | 862 | 9.520515 | AGAAATCATAAGAAAAGGCTTGTCTTA | 57.479 | 29.630 | 31.83 | 31.83 | 38.03 | 2.10 |
592 | 865 | 9.692325 | AATCATAAGAAAAGGCTTGTCTTATCT | 57.308 | 29.630 | 34.56 | 25.89 | 40.80 | 1.98 |
593 | 866 | 9.692325 | ATCATAAGAAAAGGCTTGTCTTATCTT | 57.308 | 29.630 | 34.56 | 25.74 | 40.80 | 2.40 |
634 | 907 | 7.551035 | GAGATGATCTCTTAGCACAATTTGT | 57.449 | 36.000 | 14.98 | 0.00 | 40.30 | 2.83 |
635 | 908 | 7.551035 | AGATGATCTCTTAGCACAATTTGTC | 57.449 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
636 | 909 | 7.337167 | AGATGATCTCTTAGCACAATTTGTCT | 58.663 | 34.615 | 0.00 | 3.34 | 0.00 | 3.41 |
637 | 910 | 6.974932 | TGATCTCTTAGCACAATTTGTCTC | 57.025 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
638 | 911 | 6.466812 | TGATCTCTTAGCACAATTTGTCTCA | 58.533 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
639 | 912 | 7.108194 | TGATCTCTTAGCACAATTTGTCTCAT | 58.892 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
640 | 913 | 6.974932 | TCTCTTAGCACAATTTGTCTCATC | 57.025 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
641 | 914 | 6.466812 | TCTCTTAGCACAATTTGTCTCATCA | 58.533 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
642 | 915 | 7.108194 | TCTCTTAGCACAATTTGTCTCATCAT | 58.892 | 34.615 | 0.00 | 0.00 | 0.00 | 2.45 |
643 | 916 | 8.260114 | TCTCTTAGCACAATTTGTCTCATCATA | 58.740 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
644 | 917 | 8.969260 | TCTTAGCACAATTTGTCTCATCATAT | 57.031 | 30.769 | 0.00 | 0.00 | 0.00 | 1.78 |
645 | 918 | 9.399797 | TCTTAGCACAATTTGTCTCATCATATT | 57.600 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
658 | 931 | 9.739276 | TGTCTCATCATATTTTTAGGAACAACT | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
676 | 949 | 9.952188 | GGAACAACTAATTATTGAAGATAAGGC | 57.048 | 33.333 | 11.95 | 0.00 | 0.00 | 4.35 |
687 | 960 | 9.988815 | TTATTGAAGATAAGGCTAAGAGATGAC | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
688 | 961 | 6.412362 | TGAAGATAAGGCTAAGAGATGACC | 57.588 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
689 | 962 | 5.305644 | TGAAGATAAGGCTAAGAGATGACCC | 59.694 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
690 | 963 | 4.820775 | AGATAAGGCTAAGAGATGACCCA | 58.179 | 43.478 | 0.00 | 0.00 | 0.00 | 4.51 |
691 | 964 | 5.410602 | AGATAAGGCTAAGAGATGACCCAT | 58.589 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
692 | 965 | 5.848921 | AGATAAGGCTAAGAGATGACCCATT | 59.151 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
693 | 966 | 3.853355 | AGGCTAAGAGATGACCCATTG | 57.147 | 47.619 | 0.00 | 0.00 | 0.00 | 2.82 |
694 | 967 | 3.118531 | AGGCTAAGAGATGACCCATTGT | 58.881 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
695 | 968 | 4.298626 | AGGCTAAGAGATGACCCATTGTA | 58.701 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
696 | 969 | 4.346418 | AGGCTAAGAGATGACCCATTGTAG | 59.654 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
697 | 970 | 4.345257 | GGCTAAGAGATGACCCATTGTAGA | 59.655 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
698 | 971 | 5.293560 | GCTAAGAGATGACCCATTGTAGAC | 58.706 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
699 | 972 | 5.163405 | GCTAAGAGATGACCCATTGTAGACA | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 3.41 |
700 | 973 | 5.965033 | AAGAGATGACCCATTGTAGACAT | 57.035 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
701 | 974 | 5.287674 | AGAGATGACCCATTGTAGACATG | 57.712 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
702 | 975 | 4.718774 | AGAGATGACCCATTGTAGACATGT | 59.281 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
703 | 976 | 5.190528 | AGAGATGACCCATTGTAGACATGTT | 59.809 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
704 | 977 | 5.819991 | AGATGACCCATTGTAGACATGTTT | 58.180 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
705 | 978 | 6.248433 | AGATGACCCATTGTAGACATGTTTT | 58.752 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
706 | 979 | 5.957842 | TGACCCATTGTAGACATGTTTTC | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
707 | 980 | 5.630121 | TGACCCATTGTAGACATGTTTTCT | 58.370 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
708 | 981 | 6.068010 | TGACCCATTGTAGACATGTTTTCTT | 58.932 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
709 | 982 | 6.016360 | TGACCCATTGTAGACATGTTTTCTTG | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
710 | 983 | 5.833131 | ACCCATTGTAGACATGTTTTCTTGT | 59.167 | 36.000 | 0.00 | 0.00 | 40.19 | 3.16 |
729 | 1002 | 8.791327 | TTCTTGTCATCTCTAATTTACATGCA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 3.96 |
730 | 1003 | 8.791327 | TCTTGTCATCTCTAATTTACATGCAA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 4.08 |
731 | 1004 | 9.230122 | TCTTGTCATCTCTAATTTACATGCAAA | 57.770 | 29.630 | 0.00 | 0.00 | 0.00 | 3.68 |
732 | 1005 | 9.844790 | CTTGTCATCTCTAATTTACATGCAAAA | 57.155 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
733 | 1006 | 9.624697 | TTGTCATCTCTAATTTACATGCAAAAC | 57.375 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
734 | 1007 | 9.013229 | TGTCATCTCTAATTTACATGCAAAACT | 57.987 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
735 | 1008 | 9.846248 | GTCATCTCTAATTTACATGCAAAACTT | 57.154 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
768 | 1041 | 9.770097 | AGACTATCTTATCAACCATTGTACATG | 57.230 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
769 | 1042 | 8.383318 | ACTATCTTATCAACCATTGTACATGC | 57.617 | 34.615 | 0.00 | 0.00 | 0.00 | 4.06 |
770 | 1043 | 6.639632 | ATCTTATCAACCATTGTACATGCC | 57.360 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
771 | 1044 | 4.887071 | TCTTATCAACCATTGTACATGCCC | 59.113 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
772 | 1045 | 2.897271 | TCAACCATTGTACATGCCCT | 57.103 | 45.000 | 0.00 | 0.00 | 0.00 | 5.19 |
773 | 1046 | 3.168035 | TCAACCATTGTACATGCCCTT | 57.832 | 42.857 | 0.00 | 0.00 | 0.00 | 3.95 |
777 | 1050 | 4.249638 | ACCATTGTACATGCCCTTATGT | 57.750 | 40.909 | 0.00 | 0.00 | 43.34 | 2.29 |
786 | 1059 | 0.179048 | TGCCCTTATGTCATGCCTCG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
865 | 1138 | 0.951558 | CCCCGCAGATTATTTTCCCG | 59.048 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
895 | 1168 | 2.284625 | TGTCTCCGGTCCATGCCT | 60.285 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
911 | 1184 | 2.526046 | CCTCCAACTTCCCACCGGT | 61.526 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
912 | 1185 | 1.003718 | CTCCAACTTCCCACCGGTC | 60.004 | 63.158 | 2.59 | 0.00 | 0.00 | 4.79 |
913 | 1186 | 2.033602 | CCAACTTCCCACCGGTCC | 59.966 | 66.667 | 2.59 | 0.00 | 0.00 | 4.46 |
914 | 1187 | 2.033602 | CAACTTCCCACCGGTCCC | 59.966 | 66.667 | 2.59 | 0.00 | 0.00 | 4.46 |
2383 | 2659 | 0.243907 | GCTGCACCTCGAGTACTTCA | 59.756 | 55.000 | 12.31 | 1.20 | 0.00 | 3.02 |
2550 | 2826 | 0.388520 | CGTGCTCAGGTTGATCGACA | 60.389 | 55.000 | 15.11 | 0.00 | 0.00 | 4.35 |
2557 | 2833 | 3.195698 | GTTGATCGACAGGGGCGC | 61.196 | 66.667 | 8.31 | 0.00 | 0.00 | 6.53 |
2577 | 2853 | 1.279271 | CACCATCTTCTCCTTTCCCGT | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
2616 | 2900 | 1.719600 | AGCTTCTCGTTGCTCATGAC | 58.280 | 50.000 | 0.00 | 0.00 | 33.90 | 3.06 |
2661 | 2946 | 8.998377 | AGATTAAGCTTGTCTTCTTCTTTTCTC | 58.002 | 33.333 | 9.86 | 0.00 | 36.25 | 2.87 |
2768 | 3059 | 3.925379 | TGCGTCTTCTATTCAGAAAGCA | 58.075 | 40.909 | 7.37 | 7.37 | 40.28 | 3.91 |
2776 | 3067 | 8.656849 | GTCTTCTATTCAGAAAGCACGAAAATA | 58.343 | 33.333 | 0.00 | 0.00 | 40.28 | 1.40 |
2790 | 3081 | 7.830739 | AGCACGAAAATATCAAAAATTCTCCT | 58.169 | 30.769 | 0.00 | 0.00 | 0.00 | 3.69 |
2906 | 3199 | 2.276201 | CCCATGATACGAACGCAAGAA | 58.724 | 47.619 | 0.00 | 0.00 | 43.62 | 2.52 |
3011 | 3305 | 2.383855 | AGCAACCCAAGCAACAACTAA | 58.616 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
3044 | 3338 | 3.782523 | TCTCCAAATCTAGCACCAAGGAT | 59.217 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
3150 | 3447 | 0.984230 | TTTCCCCTGATGCTCGAAGT | 59.016 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3163 | 3460 | 0.468226 | TCGAAGTGGGGCATGGATAC | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3244 | 3541 | 1.031571 | GGATGCAGTGATTTCGCCCA | 61.032 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3263 | 3560 | 2.079158 | CAGGCCATATACCGAGCAATG | 58.921 | 52.381 | 5.01 | 0.00 | 0.00 | 2.82 |
3349 | 3647 | 4.101448 | GGGAGCCATGCCTGACGT | 62.101 | 66.667 | 0.00 | 0.00 | 33.20 | 4.34 |
3409 | 3708 | 1.685224 | GAGGGTGAGGTTGCATGGA | 59.315 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
3469 | 3784 | 0.390860 | CGAGCCAAGATCCGGAAGAT | 59.609 | 55.000 | 9.01 | 0.00 | 38.17 | 2.40 |
3476 | 3791 | 1.040646 | AGATCCGGAAGATAGCGCAA | 58.959 | 50.000 | 9.01 | 0.00 | 34.42 | 4.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
23 | 24 | 9.810231 | GGTGTGCTACAAATTTTAAATCATTTG | 57.190 | 29.630 | 17.81 | 17.81 | 43.31 | 2.32 |
24 | 25 | 9.777297 | AGGTGTGCTACAAATTTTAAATCATTT | 57.223 | 25.926 | 0.00 | 0.00 | 0.00 | 2.32 |
25 | 26 | 9.777297 | AAGGTGTGCTACAAATTTTAAATCATT | 57.223 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
32 | 33 | 8.785946 | GGTACTTAAGGTGTGCTACAAATTTTA | 58.214 | 33.333 | 7.53 | 0.00 | 0.00 | 1.52 |
33 | 34 | 7.285858 | TGGTACTTAAGGTGTGCTACAAATTTT | 59.714 | 33.333 | 7.53 | 0.00 | 0.00 | 1.82 |
34 | 35 | 6.773685 | TGGTACTTAAGGTGTGCTACAAATTT | 59.226 | 34.615 | 7.53 | 0.00 | 0.00 | 1.82 |
35 | 36 | 6.300703 | TGGTACTTAAGGTGTGCTACAAATT | 58.699 | 36.000 | 7.53 | 0.00 | 0.00 | 1.82 |
36 | 37 | 5.871834 | TGGTACTTAAGGTGTGCTACAAAT | 58.128 | 37.500 | 7.53 | 0.00 | 0.00 | 2.32 |
37 | 38 | 5.293319 | TGGTACTTAAGGTGTGCTACAAA | 57.707 | 39.130 | 7.53 | 0.00 | 0.00 | 2.83 |
38 | 39 | 4.959560 | TGGTACTTAAGGTGTGCTACAA | 57.040 | 40.909 | 7.53 | 0.00 | 0.00 | 2.41 |
39 | 40 | 4.959560 | TTGGTACTTAAGGTGTGCTACA | 57.040 | 40.909 | 7.53 | 0.00 | 0.00 | 2.74 |
40 | 41 | 6.812879 | AATTTGGTACTTAAGGTGTGCTAC | 57.187 | 37.500 | 7.53 | 0.00 | 0.00 | 3.58 |
41 | 42 | 8.545472 | AGATAATTTGGTACTTAAGGTGTGCTA | 58.455 | 33.333 | 7.53 | 0.00 | 0.00 | 3.49 |
42 | 43 | 7.402862 | AGATAATTTGGTACTTAAGGTGTGCT | 58.597 | 34.615 | 7.53 | 0.00 | 0.00 | 4.40 |
43 | 44 | 7.625828 | AGATAATTTGGTACTTAAGGTGTGC | 57.374 | 36.000 | 7.53 | 0.00 | 0.00 | 4.57 |
44 | 45 | 8.674607 | GGAAGATAATTTGGTACTTAAGGTGTG | 58.325 | 37.037 | 7.53 | 0.00 | 0.00 | 3.82 |
45 | 46 | 8.387813 | TGGAAGATAATTTGGTACTTAAGGTGT | 58.612 | 33.333 | 7.53 | 0.00 | 0.00 | 4.16 |
46 | 47 | 8.801882 | TGGAAGATAATTTGGTACTTAAGGTG | 57.198 | 34.615 | 7.53 | 0.00 | 0.00 | 4.00 |
47 | 48 | 9.408648 | CATGGAAGATAATTTGGTACTTAAGGT | 57.591 | 33.333 | 7.53 | 0.00 | 0.00 | 3.50 |
48 | 49 | 9.627123 | TCATGGAAGATAATTTGGTACTTAAGG | 57.373 | 33.333 | 7.53 | 0.00 | 0.00 | 2.69 |
107 | 108 | 9.202273 | CGATGAAGGGAAAATTCATAAAAACAA | 57.798 | 29.630 | 1.42 | 0.00 | 45.15 | 2.83 |
108 | 109 | 7.816995 | CCGATGAAGGGAAAATTCATAAAAACA | 59.183 | 33.333 | 1.42 | 0.00 | 45.15 | 2.83 |
109 | 110 | 8.185003 | CCGATGAAGGGAAAATTCATAAAAAC | 57.815 | 34.615 | 1.42 | 0.00 | 45.15 | 2.43 |
125 | 126 | 0.755079 | TCATCTGCTCCCGATGAAGG | 59.245 | 55.000 | 0.60 | 0.00 | 42.97 | 3.46 |
126 | 127 | 1.411977 | ACTCATCTGCTCCCGATGAAG | 59.588 | 52.381 | 4.52 | 2.51 | 44.62 | 3.02 |
127 | 128 | 1.489481 | ACTCATCTGCTCCCGATGAA | 58.511 | 50.000 | 4.52 | 0.00 | 44.62 | 2.57 |
128 | 129 | 1.489481 | AACTCATCTGCTCCCGATGA | 58.511 | 50.000 | 0.00 | 0.00 | 43.52 | 2.92 |
129 | 130 | 1.938577 | CAAACTCATCTGCTCCCGATG | 59.061 | 52.381 | 0.00 | 0.00 | 39.62 | 3.84 |
130 | 131 | 1.134280 | CCAAACTCATCTGCTCCCGAT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
131 | 132 | 0.250234 | CCAAACTCATCTGCTCCCGA | 59.750 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
132 | 133 | 0.745845 | CCCAAACTCATCTGCTCCCG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
133 | 134 | 1.034292 | GCCCAAACTCATCTGCTCCC | 61.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
134 | 135 | 0.034670 | AGCCCAAACTCATCTGCTCC | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
135 | 136 | 1.831580 | AAGCCCAAACTCATCTGCTC | 58.168 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
136 | 137 | 2.573462 | TCTAAGCCCAAACTCATCTGCT | 59.427 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
137 | 138 | 2.991250 | TCTAAGCCCAAACTCATCTGC | 58.009 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
138 | 139 | 5.649395 | TCATTTCTAAGCCCAAACTCATCTG | 59.351 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
139 | 140 | 5.819991 | TCATTTCTAAGCCCAAACTCATCT | 58.180 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
140 | 141 | 6.515272 | TTCATTTCTAAGCCCAAACTCATC | 57.485 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
141 | 142 | 8.773033 | ATATTCATTTCTAAGCCCAAACTCAT | 57.227 | 30.769 | 0.00 | 0.00 | 0.00 | 2.90 |
142 | 143 | 8.593945 | AATATTCATTTCTAAGCCCAAACTCA | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
143 | 144 | 7.857885 | CGAATATTCATTTCTAAGCCCAAACTC | 59.142 | 37.037 | 15.57 | 0.00 | 0.00 | 3.01 |
144 | 145 | 7.556275 | TCGAATATTCATTTCTAAGCCCAAACT | 59.444 | 33.333 | 15.57 | 0.00 | 0.00 | 2.66 |
145 | 146 | 7.703328 | TCGAATATTCATTTCTAAGCCCAAAC | 58.297 | 34.615 | 15.57 | 0.00 | 0.00 | 2.93 |
146 | 147 | 7.873719 | TCGAATATTCATTTCTAAGCCCAAA | 57.126 | 32.000 | 15.57 | 0.00 | 0.00 | 3.28 |
147 | 148 | 7.873719 | TTCGAATATTCATTTCTAAGCCCAA | 57.126 | 32.000 | 15.57 | 0.00 | 0.00 | 4.12 |
148 | 149 | 7.939039 | AGATTCGAATATTCATTTCTAAGCCCA | 59.061 | 33.333 | 11.38 | 0.00 | 0.00 | 5.36 |
149 | 150 | 8.329203 | AGATTCGAATATTCATTTCTAAGCCC | 57.671 | 34.615 | 11.38 | 0.00 | 0.00 | 5.19 |
150 | 151 | 8.993121 | TGAGATTCGAATATTCATTTCTAAGCC | 58.007 | 33.333 | 11.38 | 3.26 | 0.00 | 4.35 |
157 | 158 | 9.806203 | TGCAATTTGAGATTCGAATATTCATTT | 57.194 | 25.926 | 19.61 | 14.98 | 30.56 | 2.32 |
158 | 159 | 9.806203 | TTGCAATTTGAGATTCGAATATTCATT | 57.194 | 25.926 | 19.61 | 12.40 | 30.56 | 2.57 |
159 | 160 | 9.976511 | ATTGCAATTTGAGATTCGAATATTCAT | 57.023 | 25.926 | 19.61 | 2.29 | 30.56 | 2.57 |
160 | 161 | 9.454585 | GATTGCAATTTGAGATTCGAATATTCA | 57.545 | 29.630 | 14.33 | 14.66 | 30.56 | 2.57 |
161 | 162 | 9.674824 | AGATTGCAATTTGAGATTCGAATATTC | 57.325 | 29.630 | 14.33 | 12.26 | 30.56 | 1.75 |
165 | 166 | 8.896744 | TCTAAGATTGCAATTTGAGATTCGAAT | 58.103 | 29.630 | 14.33 | 11.20 | 32.00 | 3.34 |
166 | 167 | 8.267620 | TCTAAGATTGCAATTTGAGATTCGAA | 57.732 | 30.769 | 14.33 | 0.00 | 0.00 | 3.71 |
167 | 168 | 7.848223 | TCTAAGATTGCAATTTGAGATTCGA | 57.152 | 32.000 | 14.33 | 1.95 | 0.00 | 3.71 |
168 | 169 | 8.900511 | TTTCTAAGATTGCAATTTGAGATTCG | 57.099 | 30.769 | 15.93 | 2.27 | 0.00 | 3.34 |
172 | 173 | 9.683069 | GTTCTTTTCTAAGATTGCAATTTGAGA | 57.317 | 29.630 | 14.33 | 13.06 | 40.01 | 3.27 |
173 | 174 | 9.688592 | AGTTCTTTTCTAAGATTGCAATTTGAG | 57.311 | 29.630 | 14.33 | 10.71 | 40.01 | 3.02 |
195 | 196 | 5.872070 | GCCCATAGAATCTGCTATGTAGTTC | 59.128 | 44.000 | 0.00 | 0.00 | 43.91 | 3.01 |
200 | 201 | 4.923516 | ATGCCCATAGAATCTGCTATGT | 57.076 | 40.909 | 0.00 | 0.00 | 43.91 | 2.29 |
201 | 202 | 6.349944 | GGAAAATGCCCATAGAATCTGCTATG | 60.350 | 42.308 | 0.00 | 0.00 | 44.63 | 2.23 |
204 | 205 | 3.893813 | GGAAAATGCCCATAGAATCTGCT | 59.106 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
212 | 213 | 5.595542 | TCAAGATTCTGGAAAATGCCCATAG | 59.404 | 40.000 | 0.00 | 0.00 | 32.49 | 2.23 |
213 | 214 | 5.517924 | TCAAGATTCTGGAAAATGCCCATA | 58.482 | 37.500 | 0.00 | 0.00 | 32.49 | 2.74 |
214 | 215 | 4.355549 | TCAAGATTCTGGAAAATGCCCAT | 58.644 | 39.130 | 0.00 | 0.00 | 32.49 | 4.00 |
244 | 245 | 3.119495 | CGGGTTCTTTTCCCACATGATTC | 60.119 | 47.826 | 0.00 | 0.00 | 44.81 | 2.52 |
249 | 250 | 1.546998 | GGTCGGGTTCTTTTCCCACAT | 60.547 | 52.381 | 1.91 | 0.00 | 44.81 | 3.21 |
254 | 255 | 1.694844 | TTTGGGTCGGGTTCTTTTCC | 58.305 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
264 | 265 | 2.785562 | TGAGGTTAACATTTGGGTCGG | 58.214 | 47.619 | 8.10 | 0.00 | 0.00 | 4.79 |
265 | 266 | 4.320935 | CCTTTGAGGTTAACATTTGGGTCG | 60.321 | 45.833 | 8.10 | 0.00 | 0.00 | 4.79 |
267 | 268 | 3.323691 | GCCTTTGAGGTTAACATTTGGGT | 59.676 | 43.478 | 8.10 | 0.00 | 37.80 | 4.51 |
278 | 279 | 3.245158 | GGGGTTTACTAGCCTTTGAGGTT | 60.245 | 47.826 | 0.00 | 0.00 | 44.17 | 3.50 |
367 | 368 | 9.829507 | ACCACATTTTCAAATTTTGATCAGTTA | 57.170 | 25.926 | 12.39 | 0.00 | 39.84 | 2.24 |
401 | 402 | 0.779997 | AAGTTCTGCCCAAGGATGGT | 59.220 | 50.000 | 0.00 | 0.00 | 46.01 | 3.55 |
408 | 409 | 2.957402 | ACTGATGAAGTTCTGCCCAA | 57.043 | 45.000 | 4.17 | 0.00 | 34.57 | 4.12 |
432 | 433 | 8.839310 | ACAGATAACCTCATGATGCTTAATAC | 57.161 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
456 | 457 | 6.753107 | TTTATTCAGGGTTGCTAAGCTTAC | 57.247 | 37.500 | 0.86 | 0.76 | 0.00 | 2.34 |
498 | 771 | 5.606749 | AGATAGAACCATTGTACATGCCCTA | 59.393 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
499 | 772 | 4.413520 | AGATAGAACCATTGTACATGCCCT | 59.586 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
500 | 773 | 4.718961 | AGATAGAACCATTGTACATGCCC | 58.281 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
501 | 774 | 7.715249 | TCTTAAGATAGAACCATTGTACATGCC | 59.285 | 37.037 | 0.00 | 0.00 | 0.00 | 4.40 |
502 | 775 | 8.662781 | TCTTAAGATAGAACCATTGTACATGC | 57.337 | 34.615 | 0.00 | 0.00 | 0.00 | 4.06 |
503 | 776 | 9.823647 | ACTCTTAAGATAGAACCATTGTACATG | 57.176 | 33.333 | 5.44 | 0.00 | 0.00 | 3.21 |
504 | 777 | 9.823647 | CACTCTTAAGATAGAACCATTGTACAT | 57.176 | 33.333 | 5.44 | 0.00 | 0.00 | 2.29 |
505 | 778 | 7.764443 | GCACTCTTAAGATAGAACCATTGTACA | 59.236 | 37.037 | 5.44 | 0.00 | 0.00 | 2.90 |
506 | 779 | 7.224949 | GGCACTCTTAAGATAGAACCATTGTAC | 59.775 | 40.741 | 5.44 | 0.00 | 0.00 | 2.90 |
507 | 780 | 7.093068 | TGGCACTCTTAAGATAGAACCATTGTA | 60.093 | 37.037 | 5.44 | 0.00 | 0.00 | 2.41 |
508 | 781 | 6.116126 | GGCACTCTTAAGATAGAACCATTGT | 58.884 | 40.000 | 5.44 | 0.00 | 0.00 | 2.71 |
509 | 782 | 6.037610 | GTGGCACTCTTAAGATAGAACCATTG | 59.962 | 42.308 | 11.13 | 0.00 | 29.63 | 2.82 |
510 | 783 | 6.116126 | GTGGCACTCTTAAGATAGAACCATT | 58.884 | 40.000 | 11.13 | 0.00 | 29.63 | 3.16 |
511 | 784 | 5.189736 | TGTGGCACTCTTAAGATAGAACCAT | 59.810 | 40.000 | 19.83 | 0.00 | 29.63 | 3.55 |
512 | 785 | 4.530553 | TGTGGCACTCTTAAGATAGAACCA | 59.469 | 41.667 | 19.83 | 7.13 | 0.00 | 3.67 |
513 | 786 | 5.086104 | TGTGGCACTCTTAAGATAGAACC | 57.914 | 43.478 | 19.83 | 4.65 | 0.00 | 3.62 |
514 | 787 | 6.926272 | CCTATGTGGCACTCTTAAGATAGAAC | 59.074 | 42.308 | 19.83 | 2.56 | 0.00 | 3.01 |
515 | 788 | 6.839134 | TCCTATGTGGCACTCTTAAGATAGAA | 59.161 | 38.462 | 19.83 | 0.00 | 35.26 | 2.10 |
516 | 789 | 6.373759 | TCCTATGTGGCACTCTTAAGATAGA | 58.626 | 40.000 | 19.83 | 3.77 | 35.26 | 1.98 |
517 | 790 | 6.656632 | TCCTATGTGGCACTCTTAAGATAG | 57.343 | 41.667 | 19.83 | 14.18 | 35.26 | 2.08 |
518 | 791 | 8.721133 | TTATCCTATGTGGCACTCTTAAGATA | 57.279 | 34.615 | 19.83 | 13.60 | 35.26 | 1.98 |
519 | 792 | 7.618019 | TTATCCTATGTGGCACTCTTAAGAT | 57.382 | 36.000 | 19.83 | 14.50 | 35.26 | 2.40 |
520 | 793 | 7.432148 | TTTATCCTATGTGGCACTCTTAAGA | 57.568 | 36.000 | 19.83 | 4.81 | 35.26 | 2.10 |
521 | 794 | 7.933577 | TCATTTATCCTATGTGGCACTCTTAAG | 59.066 | 37.037 | 19.83 | 8.46 | 35.26 | 1.85 |
522 | 795 | 7.801104 | TCATTTATCCTATGTGGCACTCTTAA | 58.199 | 34.615 | 19.83 | 0.00 | 35.26 | 1.85 |
523 | 796 | 7.373617 | TCATTTATCCTATGTGGCACTCTTA | 57.626 | 36.000 | 19.83 | 7.20 | 35.26 | 2.10 |
524 | 797 | 6.252599 | TCATTTATCCTATGTGGCACTCTT | 57.747 | 37.500 | 19.83 | 6.37 | 35.26 | 2.85 |
525 | 798 | 5.894298 | TCATTTATCCTATGTGGCACTCT | 57.106 | 39.130 | 19.83 | 8.78 | 35.26 | 3.24 |
526 | 799 | 6.233434 | TCATCATTTATCCTATGTGGCACTC | 58.767 | 40.000 | 19.83 | 0.00 | 35.26 | 3.51 |
527 | 800 | 6.191657 | TCATCATTTATCCTATGTGGCACT | 57.808 | 37.500 | 19.83 | 6.99 | 35.26 | 4.40 |
528 | 801 | 5.413833 | CCTCATCATTTATCCTATGTGGCAC | 59.586 | 44.000 | 11.55 | 11.55 | 35.26 | 5.01 |
529 | 802 | 5.073554 | ACCTCATCATTTATCCTATGTGGCA | 59.926 | 40.000 | 0.00 | 0.00 | 36.78 | 4.92 |
530 | 803 | 5.413833 | CACCTCATCATTTATCCTATGTGGC | 59.586 | 44.000 | 0.00 | 0.00 | 36.78 | 5.01 |
531 | 804 | 5.942236 | CCACCTCATCATTTATCCTATGTGG | 59.058 | 44.000 | 0.00 | 0.00 | 38.40 | 4.17 |
532 | 805 | 6.772605 | TCCACCTCATCATTTATCCTATGTG | 58.227 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
533 | 806 | 6.013032 | CCTCCACCTCATCATTTATCCTATGT | 60.013 | 42.308 | 0.00 | 0.00 | 0.00 | 2.29 |
534 | 807 | 6.214208 | TCCTCCACCTCATCATTTATCCTATG | 59.786 | 42.308 | 0.00 | 0.00 | 0.00 | 2.23 |
535 | 808 | 6.334296 | TCCTCCACCTCATCATTTATCCTAT | 58.666 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
536 | 809 | 5.726560 | TCCTCCACCTCATCATTTATCCTA | 58.273 | 41.667 | 0.00 | 0.00 | 0.00 | 2.94 |
537 | 810 | 4.570926 | TCCTCCACCTCATCATTTATCCT | 58.429 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
538 | 811 | 4.594920 | TCTCCTCCACCTCATCATTTATCC | 59.405 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
539 | 812 | 5.541868 | TCTCTCCTCCACCTCATCATTTATC | 59.458 | 44.000 | 0.00 | 0.00 | 0.00 | 1.75 |
540 | 813 | 5.471424 | TCTCTCCTCCACCTCATCATTTAT | 58.529 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
541 | 814 | 4.883759 | TCTCTCCTCCACCTCATCATTTA | 58.116 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
542 | 815 | 3.710677 | CTCTCTCCTCCACCTCATCATTT | 59.289 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
543 | 816 | 3.052262 | TCTCTCTCCTCCACCTCATCATT | 60.052 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
544 | 817 | 2.517553 | TCTCTCTCCTCCACCTCATCAT | 59.482 | 50.000 | 0.00 | 0.00 | 0.00 | 2.45 |
545 | 818 | 1.925959 | TCTCTCTCCTCCACCTCATCA | 59.074 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
546 | 819 | 2.746279 | TCTCTCTCCTCCACCTCATC | 57.254 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
547 | 820 | 3.481559 | TTTCTCTCTCCTCCACCTCAT | 57.518 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
548 | 821 | 3.245766 | TGATTTCTCTCTCCTCCACCTCA | 60.246 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
549 | 822 | 3.370104 | TGATTTCTCTCTCCTCCACCTC | 58.630 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
550 | 823 | 3.481559 | TGATTTCTCTCTCCTCCACCT | 57.518 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
551 | 824 | 5.600484 | TCTTATGATTTCTCTCTCCTCCACC | 59.400 | 44.000 | 0.00 | 0.00 | 0.00 | 4.61 |
552 | 825 | 6.723298 | TCTTATGATTTCTCTCTCCTCCAC | 57.277 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
553 | 826 | 7.739995 | TTTCTTATGATTTCTCTCTCCTCCA | 57.260 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
554 | 827 | 7.714813 | CCTTTTCTTATGATTTCTCTCTCCTCC | 59.285 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
555 | 828 | 7.226523 | GCCTTTTCTTATGATTTCTCTCTCCTC | 59.773 | 40.741 | 0.00 | 0.00 | 0.00 | 3.71 |
556 | 829 | 7.053498 | GCCTTTTCTTATGATTTCTCTCTCCT | 58.947 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
557 | 830 | 7.053498 | AGCCTTTTCTTATGATTTCTCTCTCC | 58.947 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
558 | 831 | 8.397148 | CAAGCCTTTTCTTATGATTTCTCTCTC | 58.603 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
559 | 832 | 7.887495 | ACAAGCCTTTTCTTATGATTTCTCTCT | 59.113 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
560 | 833 | 8.049655 | ACAAGCCTTTTCTTATGATTTCTCTC | 57.950 | 34.615 | 0.00 | 0.00 | 0.00 | 3.20 |
561 | 834 | 7.887495 | AGACAAGCCTTTTCTTATGATTTCTCT | 59.113 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
562 | 835 | 8.049655 | AGACAAGCCTTTTCTTATGATTTCTC | 57.950 | 34.615 | 0.00 | 0.00 | 0.00 | 2.87 |
563 | 836 | 8.414629 | AAGACAAGCCTTTTCTTATGATTTCT | 57.585 | 30.769 | 4.07 | 0.00 | 0.00 | 2.52 |
566 | 839 | 9.692325 | AGATAAGACAAGCCTTTTCTTATGATT | 57.308 | 29.630 | 23.73 | 11.04 | 40.87 | 2.57 |
567 | 840 | 9.692325 | AAGATAAGACAAGCCTTTTCTTATGAT | 57.308 | 29.630 | 23.73 | 13.17 | 40.87 | 2.45 |
610 | 883 | 7.495279 | AGACAAATTGTGCTAAGAGATCATCTC | 59.505 | 37.037 | 6.55 | 6.55 | 43.70 | 2.75 |
611 | 884 | 7.337167 | AGACAAATTGTGCTAAGAGATCATCT | 58.663 | 34.615 | 2.20 | 0.00 | 41.27 | 2.90 |
612 | 885 | 7.279536 | TGAGACAAATTGTGCTAAGAGATCATC | 59.720 | 37.037 | 2.20 | 0.00 | 0.00 | 2.92 |
613 | 886 | 7.108194 | TGAGACAAATTGTGCTAAGAGATCAT | 58.892 | 34.615 | 2.20 | 0.00 | 0.00 | 2.45 |
614 | 887 | 6.466812 | TGAGACAAATTGTGCTAAGAGATCA | 58.533 | 36.000 | 2.20 | 0.00 | 0.00 | 2.92 |
615 | 888 | 6.974932 | TGAGACAAATTGTGCTAAGAGATC | 57.025 | 37.500 | 2.20 | 0.00 | 0.00 | 2.75 |
616 | 889 | 7.108194 | TGATGAGACAAATTGTGCTAAGAGAT | 58.892 | 34.615 | 2.20 | 0.00 | 0.00 | 2.75 |
617 | 890 | 6.466812 | TGATGAGACAAATTGTGCTAAGAGA | 58.533 | 36.000 | 2.20 | 0.00 | 0.00 | 3.10 |
618 | 891 | 6.732531 | TGATGAGACAAATTGTGCTAAGAG | 57.267 | 37.500 | 2.20 | 0.00 | 0.00 | 2.85 |
619 | 892 | 8.969260 | ATATGATGAGACAAATTGTGCTAAGA | 57.031 | 30.769 | 2.20 | 0.00 | 0.00 | 2.10 |
632 | 905 | 9.739276 | AGTTGTTCCTAAAAATATGATGAGACA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
650 | 923 | 9.952188 | GCCTTATCTTCAATAATTAGTTGTTCC | 57.048 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
661 | 934 | 9.988815 | GTCATCTCTTAGCCTTATCTTCAATAA | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
662 | 935 | 8.589338 | GGTCATCTCTTAGCCTTATCTTCAATA | 58.411 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
663 | 936 | 7.449247 | GGTCATCTCTTAGCCTTATCTTCAAT | 58.551 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
664 | 937 | 6.183361 | GGGTCATCTCTTAGCCTTATCTTCAA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 2.69 |
665 | 938 | 5.305644 | GGGTCATCTCTTAGCCTTATCTTCA | 59.694 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
666 | 939 | 5.305644 | TGGGTCATCTCTTAGCCTTATCTTC | 59.694 | 44.000 | 0.00 | 0.00 | 34.30 | 2.87 |
667 | 940 | 5.219739 | TGGGTCATCTCTTAGCCTTATCTT | 58.780 | 41.667 | 0.00 | 0.00 | 34.30 | 2.40 |
668 | 941 | 4.820775 | TGGGTCATCTCTTAGCCTTATCT | 58.179 | 43.478 | 0.00 | 0.00 | 34.30 | 1.98 |
669 | 942 | 5.753721 | ATGGGTCATCTCTTAGCCTTATC | 57.246 | 43.478 | 0.00 | 0.00 | 34.30 | 1.75 |
670 | 943 | 5.370880 | ACAATGGGTCATCTCTTAGCCTTAT | 59.629 | 40.000 | 0.00 | 0.00 | 34.30 | 1.73 |
671 | 944 | 4.721776 | ACAATGGGTCATCTCTTAGCCTTA | 59.278 | 41.667 | 0.00 | 0.00 | 34.30 | 2.69 |
672 | 945 | 3.525199 | ACAATGGGTCATCTCTTAGCCTT | 59.475 | 43.478 | 0.00 | 0.00 | 34.30 | 4.35 |
673 | 946 | 3.118531 | ACAATGGGTCATCTCTTAGCCT | 58.881 | 45.455 | 0.00 | 0.00 | 34.30 | 4.58 |
674 | 947 | 3.567478 | ACAATGGGTCATCTCTTAGCC | 57.433 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
675 | 948 | 5.163405 | TGTCTACAATGGGTCATCTCTTAGC | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 3.09 |
676 | 949 | 6.471233 | TGTCTACAATGGGTCATCTCTTAG | 57.529 | 41.667 | 0.00 | 0.00 | 0.00 | 2.18 |
677 | 950 | 6.384015 | ACATGTCTACAATGGGTCATCTCTTA | 59.616 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
678 | 951 | 5.190528 | ACATGTCTACAATGGGTCATCTCTT | 59.809 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
679 | 952 | 4.718774 | ACATGTCTACAATGGGTCATCTCT | 59.281 | 41.667 | 0.00 | 0.00 | 0.00 | 3.10 |
680 | 953 | 5.028549 | ACATGTCTACAATGGGTCATCTC | 57.971 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
681 | 954 | 5.441718 | AACATGTCTACAATGGGTCATCT | 57.558 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
682 | 955 | 6.375455 | AGAAAACATGTCTACAATGGGTCATC | 59.625 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
683 | 956 | 6.248433 | AGAAAACATGTCTACAATGGGTCAT | 58.752 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
684 | 957 | 5.630121 | AGAAAACATGTCTACAATGGGTCA | 58.370 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
685 | 958 | 6.016276 | ACAAGAAAACATGTCTACAATGGGTC | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 4.46 |
686 | 959 | 5.833131 | ACAAGAAAACATGTCTACAATGGGT | 59.167 | 36.000 | 0.00 | 0.00 | 0.00 | 4.51 |
687 | 960 | 6.016360 | TGACAAGAAAACATGTCTACAATGGG | 60.016 | 38.462 | 0.00 | 0.00 | 44.86 | 4.00 |
688 | 961 | 6.969366 | TGACAAGAAAACATGTCTACAATGG | 58.031 | 36.000 | 0.00 | 0.00 | 44.86 | 3.16 |
689 | 962 | 8.509690 | AGATGACAAGAAAACATGTCTACAATG | 58.490 | 33.333 | 0.00 | 0.00 | 44.86 | 2.82 |
690 | 963 | 8.627208 | AGATGACAAGAAAACATGTCTACAAT | 57.373 | 30.769 | 0.00 | 0.00 | 44.86 | 2.71 |
691 | 964 | 7.933577 | AGAGATGACAAGAAAACATGTCTACAA | 59.066 | 33.333 | 0.00 | 0.00 | 44.86 | 2.41 |
692 | 965 | 7.445121 | AGAGATGACAAGAAAACATGTCTACA | 58.555 | 34.615 | 0.00 | 0.00 | 44.86 | 2.74 |
693 | 966 | 7.897575 | AGAGATGACAAGAAAACATGTCTAC | 57.102 | 36.000 | 0.00 | 0.00 | 44.86 | 2.59 |
695 | 968 | 9.512588 | AATTAGAGATGACAAGAAAACATGTCT | 57.487 | 29.630 | 0.00 | 0.00 | 44.86 | 3.41 |
703 | 976 | 9.230122 | TGCATGTAAATTAGAGATGACAAGAAA | 57.770 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
704 | 977 | 8.791327 | TGCATGTAAATTAGAGATGACAAGAA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
705 | 978 | 8.791327 | TTGCATGTAAATTAGAGATGACAAGA | 57.209 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
706 | 979 | 9.844790 | TTTTGCATGTAAATTAGAGATGACAAG | 57.155 | 29.630 | 9.89 | 0.00 | 0.00 | 3.16 |
707 | 980 | 9.624697 | GTTTTGCATGTAAATTAGAGATGACAA | 57.375 | 29.630 | 9.89 | 3.77 | 0.00 | 3.18 |
708 | 981 | 9.013229 | AGTTTTGCATGTAAATTAGAGATGACA | 57.987 | 29.630 | 9.89 | 0.00 | 0.00 | 3.58 |
709 | 982 | 9.846248 | AAGTTTTGCATGTAAATTAGAGATGAC | 57.154 | 29.630 | 9.89 | 2.31 | 0.00 | 3.06 |
742 | 1015 | 9.770097 | CATGTACAATGGTTGATAAGATAGTCT | 57.230 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
743 | 1016 | 8.499162 | GCATGTACAATGGTTGATAAGATAGTC | 58.501 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
744 | 1017 | 7.445402 | GGCATGTACAATGGTTGATAAGATAGT | 59.555 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
745 | 1018 | 7.094634 | GGGCATGTACAATGGTTGATAAGATAG | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 2.08 |
746 | 1019 | 6.714810 | GGGCATGTACAATGGTTGATAAGATA | 59.285 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
747 | 1020 | 5.536161 | GGGCATGTACAATGGTTGATAAGAT | 59.464 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
748 | 1021 | 4.887071 | GGGCATGTACAATGGTTGATAAGA | 59.113 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
749 | 1022 | 4.889409 | AGGGCATGTACAATGGTTGATAAG | 59.111 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
750 | 1023 | 4.865905 | AGGGCATGTACAATGGTTGATAA | 58.134 | 39.130 | 0.00 | 0.00 | 0.00 | 1.75 |
751 | 1024 | 4.518278 | AGGGCATGTACAATGGTTGATA | 57.482 | 40.909 | 0.00 | 0.00 | 0.00 | 2.15 |
752 | 1025 | 3.386932 | AGGGCATGTACAATGGTTGAT | 57.613 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
753 | 1026 | 2.897271 | AGGGCATGTACAATGGTTGA | 57.103 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
754 | 1027 | 4.402155 | ACATAAGGGCATGTACAATGGTTG | 59.598 | 41.667 | 0.00 | 0.00 | 37.37 | 3.77 |
755 | 1028 | 4.609301 | ACATAAGGGCATGTACAATGGTT | 58.391 | 39.130 | 0.00 | 0.00 | 37.37 | 3.67 |
756 | 1029 | 4.207165 | GACATAAGGGCATGTACAATGGT | 58.793 | 43.478 | 0.00 | 0.00 | 39.25 | 3.55 |
757 | 1030 | 4.206375 | TGACATAAGGGCATGTACAATGG | 58.794 | 43.478 | 0.00 | 0.00 | 39.25 | 3.16 |
758 | 1031 | 5.765176 | CATGACATAAGGGCATGTACAATG | 58.235 | 41.667 | 0.00 | 0.00 | 39.25 | 2.82 |
759 | 1032 | 4.279169 | GCATGACATAAGGGCATGTACAAT | 59.721 | 41.667 | 11.05 | 0.00 | 39.25 | 2.71 |
760 | 1033 | 3.631686 | GCATGACATAAGGGCATGTACAA | 59.368 | 43.478 | 11.05 | 0.00 | 39.25 | 2.41 |
761 | 1034 | 3.213506 | GCATGACATAAGGGCATGTACA | 58.786 | 45.455 | 11.05 | 0.00 | 39.25 | 2.90 |
762 | 1035 | 2.554032 | GGCATGACATAAGGGCATGTAC | 59.446 | 50.000 | 11.05 | 2.00 | 39.25 | 2.90 |
763 | 1036 | 2.442878 | AGGCATGACATAAGGGCATGTA | 59.557 | 45.455 | 11.05 | 0.00 | 39.25 | 2.29 |
764 | 1037 | 1.216175 | AGGCATGACATAAGGGCATGT | 59.784 | 47.619 | 11.05 | 0.00 | 41.83 | 3.21 |
765 | 1038 | 1.884579 | GAGGCATGACATAAGGGCATG | 59.115 | 52.381 | 0.00 | 5.37 | 41.66 | 4.06 |
766 | 1039 | 1.544093 | CGAGGCATGACATAAGGGCAT | 60.544 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
767 | 1040 | 0.179048 | CGAGGCATGACATAAGGGCA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
768 | 1041 | 1.510480 | GCGAGGCATGACATAAGGGC | 61.510 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
769 | 1042 | 0.179048 | TGCGAGGCATGACATAAGGG | 60.179 | 55.000 | 0.00 | 0.00 | 31.71 | 3.95 |
770 | 1043 | 0.940126 | GTGCGAGGCATGACATAAGG | 59.060 | 55.000 | 0.00 | 0.00 | 41.91 | 2.69 |
771 | 1044 | 1.655484 | TGTGCGAGGCATGACATAAG | 58.345 | 50.000 | 0.00 | 0.00 | 41.91 | 1.73 |
772 | 1045 | 2.009051 | CTTGTGCGAGGCATGACATAA | 58.991 | 47.619 | 0.00 | 0.00 | 41.91 | 1.90 |
773 | 1046 | 1.066215 | ACTTGTGCGAGGCATGACATA | 60.066 | 47.619 | 0.00 | 0.00 | 41.91 | 2.29 |
777 | 1050 | 1.672030 | CCACTTGTGCGAGGCATGA | 60.672 | 57.895 | 0.00 | 0.00 | 41.91 | 3.07 |
786 | 1059 | 1.528161 | GCAAGCAAATTCCACTTGTGC | 59.472 | 47.619 | 13.45 | 3.19 | 42.20 | 4.57 |
839 | 1112 | 5.391312 | AAAATAATCTGCGGGGATATTGC | 57.609 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
895 | 1168 | 2.522367 | GGACCGGTGGGAAGTTGGA | 61.522 | 63.158 | 14.63 | 0.00 | 36.97 | 3.53 |
911 | 1184 | 1.137594 | AGGTCGGGAATGTTTGGGGA | 61.138 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
912 | 1185 | 0.679960 | GAGGTCGGGAATGTTTGGGG | 60.680 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
913 | 1186 | 0.328258 | AGAGGTCGGGAATGTTTGGG | 59.672 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
914 | 1187 | 2.200373 | AAGAGGTCGGGAATGTTTGG | 57.800 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1812 | 2088 | 0.824759 | GGGAATCCACGTAGCAGTCT | 59.175 | 55.000 | 0.09 | 0.00 | 0.00 | 3.24 |
1905 | 2181 | 4.162690 | GTCCCGGCGCTCAGGAAT | 62.163 | 66.667 | 7.64 | 0.00 | 0.00 | 3.01 |
1980 | 2256 | 0.465097 | CCCTTAGCCTGTCCTGCATG | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2383 | 2659 | 2.765969 | CCTGACCAGGTTGGCCAT | 59.234 | 61.111 | 6.09 | 0.00 | 42.67 | 4.40 |
2533 | 2809 | 0.247460 | CCTGTCGATCAACCTGAGCA | 59.753 | 55.000 | 0.00 | 0.00 | 31.10 | 4.26 |
2550 | 2826 | 3.011517 | AGAAGATGGTGCGCCCCT | 61.012 | 61.111 | 15.15 | 8.23 | 0.00 | 4.79 |
2557 | 2833 | 1.279271 | ACGGGAAAGGAGAAGATGGTG | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2577 | 2853 | 8.642432 | AGAAGCTATGATGCACTACTAAACATA | 58.358 | 33.333 | 0.00 | 0.00 | 34.99 | 2.29 |
2654 | 2938 | 8.767085 | TCATTAGCAAAAGCAAATTGAGAAAAG | 58.233 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
2906 | 3199 | 0.037697 | TCGTTAGCCATGTTCACGCT | 60.038 | 50.000 | 0.00 | 0.00 | 36.63 | 5.07 |
3011 | 3305 | 4.851639 | AGATTTGGAGATGCTGGTAGTT | 57.148 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
3119 | 3416 | 0.708802 | AGGGGAAACTCTAGGTCCGA | 59.291 | 55.000 | 0.00 | 0.00 | 41.82 | 4.55 |
3150 | 3447 | 3.884774 | GCCGGTATCCATGCCCCA | 61.885 | 66.667 | 1.90 | 0.00 | 0.00 | 4.96 |
3233 | 3530 | 0.478072 | ATATGGCCTGGGCGAAATCA | 59.522 | 50.000 | 16.08 | 0.00 | 43.06 | 2.57 |
3244 | 3541 | 1.611673 | GCATTGCTCGGTATATGGCCT | 60.612 | 52.381 | 3.32 | 0.00 | 0.00 | 5.19 |
3263 | 3560 | 1.883084 | CATACTCCGACGGCTTGGC | 60.883 | 63.158 | 9.66 | 0.00 | 0.00 | 4.52 |
3340 | 3638 | 3.062466 | CCTCCTCGACGTCAGGCA | 61.062 | 66.667 | 22.02 | 13.54 | 0.00 | 4.75 |
3344 | 3642 | 3.371063 | GGTGCCTCCTCGACGTCA | 61.371 | 66.667 | 17.16 | 1.87 | 0.00 | 4.35 |
3376 | 3675 | 1.142748 | CCTCCTTCGAAGCTCGCAT | 59.857 | 57.895 | 19.99 | 0.00 | 40.21 | 4.73 |
3409 | 3708 | 1.813092 | GCATCCTCACATTCCGCTCAT | 60.813 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
3446 | 3761 | 2.107141 | CGGATCTTGGCTCGTCCC | 59.893 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
3469 | 3784 | 0.179056 | GGTGGCCTAGATTTGCGCTA | 60.179 | 55.000 | 9.73 | 0.00 | 0.00 | 4.26 |
3476 | 3791 | 2.070650 | GGTCCCGGTGGCCTAGATT | 61.071 | 63.158 | 3.32 | 0.00 | 0.00 | 2.40 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.