Multiple sequence alignment - TraesCS7A01G301300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G301300 chr7A 100.000 4703 0 0 1 4703 419564121 419568823 0.000000e+00 8685
1 TraesCS7A01G301300 chr7A 96.335 191 6 1 4513 4703 421169126 421169315 3.530000e-81 313
2 TraesCS7A01G301300 chr7A 95.812 191 6 2 4513 4703 444906705 444906517 1.640000e-79 307
3 TraesCS7A01G301300 chr7D 97.916 4078 73 8 439 4511 373582888 373586958 0.000000e+00 7049
4 TraesCS7A01G301300 chr7B 96.705 4097 98 9 439 4509 368621208 368625293 0.000000e+00 6783
5 TraesCS7A01G301300 chr7B 85.938 128 9 7 4577 4700 432494575 432494453 1.370000e-25 128
6 TraesCS7A01G301300 chr6A 80.988 405 64 9 1 396 389247148 389246748 4.570000e-80 309
7 TraesCS7A01G301300 chr6A 85.827 127 11 4 4577 4700 347598889 347598767 1.370000e-25 128
8 TraesCS7A01G301300 chr5A 90.576 191 16 2 4513 4703 365938212 365938400 7.810000e-63 252
9 TraesCS7A01G301300 chr2A 77.635 389 75 5 35 413 263220214 263220600 4.740000e-55 226
10 TraesCS7A01G301300 chr6D 89.344 122 10 2 4579 4700 238137588 238137706 2.930000e-32 150
11 TraesCS7A01G301300 chr3B 89.286 112 8 3 4584 4695 132517883 132517990 2.280000e-28 137
12 TraesCS7A01G301300 chr1A 85.385 130 12 4 4577 4703 135817845 135817720 1.370000e-25 128
13 TraesCS7A01G301300 chr2B 84.733 131 12 4 4576 4703 753826912 753827037 1.780000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G301300 chr7A 419564121 419568823 4702 False 8685 8685 100.000 1 4703 1 chr7A.!!$F1 4702
1 TraesCS7A01G301300 chr7D 373582888 373586958 4070 False 7049 7049 97.916 439 4511 1 chr7D.!!$F1 4072
2 TraesCS7A01G301300 chr7B 368621208 368625293 4085 False 6783 6783 96.705 439 4509 1 chr7B.!!$F1 4070

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.103572 ACGAACCCGGTATTCCATCG 59.896 55.0 0.00 5.69 40.78 3.84 F
278 279 0.107897 TGTCCAGACACAAACGCACT 60.108 50.0 0.00 0.00 36.21 4.40 F
334 335 0.247185 CAACCAGGCCGCAATCATTT 59.753 50.0 0.00 0.00 0.00 2.32 F
1527 1551 0.386731 ATTGTGCCTTGTTTACGCGC 60.387 50.0 5.73 0.00 0.00 6.86 F
1584 1608 0.607489 GTGGTGTGATTGAGCTGGCT 60.607 55.0 0.00 0.00 0.00 4.75 F
3213 3237 0.822532 CTGGCATCCTTGATCCAGCC 60.823 60.0 0.00 0.00 39.53 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 1518 0.240945 CACAATTGAACACCGAGCCC 59.759 55.000 13.59 0.0 0.00 5.19 R
1527 1551 1.600957 CAGCAGAACACTGTCCTGTTG 59.399 52.381 0.00 0.0 34.40 3.33 R
1577 1601 1.965754 GACATTCCTCGGAGCCAGCT 61.966 60.000 0.00 0.0 0.00 4.24 R
3273 3297 0.095935 CTTTGCCTCGCATTCTCACG 59.904 55.000 0.00 0.0 38.76 4.35 R
3405 3429 0.388907 CCTTTTTGTGCATCCGGCTG 60.389 55.000 0.00 0.0 45.15 4.85 R
4297 4326 0.581529 TTGTCTCGAAAGCAACAGCG 59.418 50.000 0.00 0.0 0.00 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.915744 TCCTCTAGTAGGTATGAAGCTCT 57.084 43.478 0.00 0.00 46.62 4.09
23 24 5.871834 TCCTCTAGTAGGTATGAAGCTCTC 58.128 45.833 0.00 0.00 46.62 3.20
24 25 4.693566 CCTCTAGTAGGTATGAAGCTCTCG 59.306 50.000 0.00 0.00 40.94 4.04
25 26 5.511716 CCTCTAGTAGGTATGAAGCTCTCGA 60.512 48.000 0.00 0.00 40.94 4.04
26 27 6.116711 TCTAGTAGGTATGAAGCTCTCGAT 57.883 41.667 0.00 0.00 34.60 3.59
27 28 6.535540 TCTAGTAGGTATGAAGCTCTCGATT 58.464 40.000 0.00 0.00 34.60 3.34
28 29 6.999272 TCTAGTAGGTATGAAGCTCTCGATTT 59.001 38.462 0.00 0.00 34.60 2.17
29 30 6.079424 AGTAGGTATGAAGCTCTCGATTTC 57.921 41.667 0.00 0.00 34.60 2.17
30 31 5.830991 AGTAGGTATGAAGCTCTCGATTTCT 59.169 40.000 0.00 0.00 34.60 2.52
31 32 5.606348 AGGTATGAAGCTCTCGATTTCTT 57.394 39.130 0.00 0.00 0.00 2.52
32 33 5.983540 AGGTATGAAGCTCTCGATTTCTTT 58.016 37.500 0.00 0.00 0.00 2.52
33 34 6.410540 AGGTATGAAGCTCTCGATTTCTTTT 58.589 36.000 0.00 0.00 0.00 2.27
34 35 6.314896 AGGTATGAAGCTCTCGATTTCTTTTG 59.685 38.462 0.00 0.00 0.00 2.44
35 36 6.092807 GGTATGAAGCTCTCGATTTCTTTTGT 59.907 38.462 0.00 0.00 0.00 2.83
36 37 7.277981 GGTATGAAGCTCTCGATTTCTTTTGTA 59.722 37.037 0.00 0.00 0.00 2.41
37 38 7.856145 ATGAAGCTCTCGATTTCTTTTGTAT 57.144 32.000 0.00 0.00 0.00 2.29
38 39 7.672983 TGAAGCTCTCGATTTCTTTTGTATT 57.327 32.000 0.00 0.00 0.00 1.89
39 40 8.771920 TGAAGCTCTCGATTTCTTTTGTATTA 57.228 30.769 0.00 0.00 0.00 0.98
40 41 9.214957 TGAAGCTCTCGATTTCTTTTGTATTAA 57.785 29.630 0.00 0.00 0.00 1.40
43 44 9.827411 AGCTCTCGATTTCTTTTGTATTAAAAC 57.173 29.630 0.00 0.00 0.00 2.43
44 45 8.776802 GCTCTCGATTTCTTTTGTATTAAAACG 58.223 33.333 0.00 0.00 0.00 3.60
48 49 9.384682 TCGATTTCTTTTGTATTAAAACGAACC 57.615 29.630 0.00 0.00 34.58 3.62
49 50 8.632551 CGATTTCTTTTGTATTAAAACGAACCC 58.367 33.333 0.00 0.00 29.94 4.11
50 51 7.911362 TTTCTTTTGTATTAAAACGAACCCG 57.089 32.000 0.00 0.00 42.50 5.28
51 52 5.999721 TCTTTTGTATTAAAACGAACCCGG 58.000 37.500 0.00 0.00 40.78 5.73
52 53 5.530543 TCTTTTGTATTAAAACGAACCCGGT 59.469 36.000 0.00 0.00 40.78 5.28
53 54 6.708054 TCTTTTGTATTAAAACGAACCCGGTA 59.292 34.615 0.00 0.00 40.78 4.02
54 55 7.390162 TCTTTTGTATTAAAACGAACCCGGTAT 59.610 33.333 0.00 0.00 40.78 2.73
55 56 7.446001 TTTGTATTAAAACGAACCCGGTATT 57.554 32.000 0.00 0.00 40.78 1.89
56 57 6.660887 TGTATTAAAACGAACCCGGTATTC 57.339 37.500 0.00 2.88 40.78 1.75
57 58 5.584251 TGTATTAAAACGAACCCGGTATTCC 59.416 40.000 0.00 0.00 40.78 3.01
58 59 2.565046 AAAACGAACCCGGTATTCCA 57.435 45.000 0.00 0.00 40.78 3.53
59 60 2.793288 AAACGAACCCGGTATTCCAT 57.207 45.000 0.00 0.00 40.78 3.41
60 61 2.320745 AACGAACCCGGTATTCCATC 57.679 50.000 0.00 0.00 40.78 3.51
61 62 0.103572 ACGAACCCGGTATTCCATCG 59.896 55.000 0.00 5.69 40.78 3.84
62 63 0.386476 CGAACCCGGTATTCCATCGA 59.614 55.000 0.00 0.00 31.56 3.59
63 64 1.602165 CGAACCCGGTATTCCATCGAG 60.602 57.143 0.00 0.00 31.56 4.04
64 65 0.756903 AACCCGGTATTCCATCGAGG 59.243 55.000 0.00 0.00 39.47 4.63
77 78 5.551305 TCCATCGAGGATACACATTTCAT 57.449 39.130 0.00 0.00 43.07 2.57
78 79 6.664428 TCCATCGAGGATACACATTTCATA 57.336 37.500 0.00 0.00 43.07 2.15
79 80 7.061566 TCCATCGAGGATACACATTTCATAA 57.938 36.000 0.00 0.00 43.07 1.90
80 81 7.679783 TCCATCGAGGATACACATTTCATAAT 58.320 34.615 0.00 0.00 43.07 1.28
81 82 8.156820 TCCATCGAGGATACACATTTCATAATT 58.843 33.333 0.00 0.00 43.07 1.40
82 83 9.435688 CCATCGAGGATACACATTTCATAATTA 57.564 33.333 0.00 0.00 41.22 1.40
108 109 6.921486 TTTACCCAATTCTCCTTAAAACCC 57.079 37.500 0.00 0.00 0.00 4.11
109 110 4.479156 ACCCAATTCTCCTTAAAACCCA 57.521 40.909 0.00 0.00 0.00 4.51
110 111 4.416516 ACCCAATTCTCCTTAAAACCCAG 58.583 43.478 0.00 0.00 0.00 4.45
111 112 4.140782 ACCCAATTCTCCTTAAAACCCAGT 60.141 41.667 0.00 0.00 0.00 4.00
112 113 5.075344 ACCCAATTCTCCTTAAAACCCAGTA 59.925 40.000 0.00 0.00 0.00 2.74
113 114 6.194967 CCCAATTCTCCTTAAAACCCAGTAT 58.805 40.000 0.00 0.00 0.00 2.12
114 115 6.096846 CCCAATTCTCCTTAAAACCCAGTATG 59.903 42.308 0.00 0.00 0.00 2.39
115 116 6.889722 CCAATTCTCCTTAAAACCCAGTATGA 59.110 38.462 0.00 0.00 39.69 2.15
116 117 7.067494 CCAATTCTCCTTAAAACCCAGTATGAG 59.933 40.741 0.00 0.00 39.69 2.90
117 118 5.099042 TCTCCTTAAAACCCAGTATGAGC 57.901 43.478 0.00 0.00 39.69 4.26
118 119 4.534500 TCTCCTTAAAACCCAGTATGAGCA 59.466 41.667 0.00 0.00 39.69 4.26
119 120 5.013704 TCTCCTTAAAACCCAGTATGAGCAA 59.986 40.000 0.00 0.00 39.69 3.91
120 121 5.636123 TCCTTAAAACCCAGTATGAGCAAA 58.364 37.500 0.00 0.00 39.69 3.68
121 122 6.071984 TCCTTAAAACCCAGTATGAGCAAAA 58.928 36.000 0.00 0.00 39.69 2.44
122 123 6.723977 TCCTTAAAACCCAGTATGAGCAAAAT 59.276 34.615 0.00 0.00 39.69 1.82
123 124 7.035612 CCTTAAAACCCAGTATGAGCAAAATC 58.964 38.462 0.00 0.00 39.69 2.17
124 125 7.093771 CCTTAAAACCCAGTATGAGCAAAATCT 60.094 37.037 0.00 0.00 39.69 2.40
125 126 5.904362 AAACCCAGTATGAGCAAAATCTC 57.096 39.130 0.00 0.00 39.69 2.75
126 127 3.891049 ACCCAGTATGAGCAAAATCTCC 58.109 45.455 0.00 0.00 39.69 3.71
127 128 3.525199 ACCCAGTATGAGCAAAATCTCCT 59.475 43.478 0.00 0.00 39.69 3.69
128 129 4.018050 ACCCAGTATGAGCAAAATCTCCTT 60.018 41.667 0.00 0.00 39.69 3.36
129 130 5.191722 ACCCAGTATGAGCAAAATCTCCTTA 59.808 40.000 0.00 0.00 39.69 2.69
130 131 6.122277 CCCAGTATGAGCAAAATCTCCTTAA 58.878 40.000 0.00 0.00 39.69 1.85
131 132 6.261826 CCCAGTATGAGCAAAATCTCCTTAAG 59.738 42.308 0.00 0.00 39.69 1.85
132 133 7.050377 CCAGTATGAGCAAAATCTCCTTAAGA 58.950 38.462 3.36 0.00 39.69 2.10
133 134 7.554118 CCAGTATGAGCAAAATCTCCTTAAGAA 59.446 37.037 3.36 0.00 39.69 2.52
134 135 8.950210 CAGTATGAGCAAAATCTCCTTAAGAAA 58.050 33.333 3.36 0.00 39.69 2.52
135 136 9.520515 AGTATGAGCAAAATCTCCTTAAGAAAA 57.479 29.630 3.36 0.00 37.61 2.29
136 137 9.780413 GTATGAGCAAAATCTCCTTAAGAAAAG 57.220 33.333 3.36 0.00 37.61 2.27
137 138 8.641498 ATGAGCAAAATCTCCTTAAGAAAAGA 57.359 30.769 3.36 4.47 37.61 2.52
138 139 7.875971 TGAGCAAAATCTCCTTAAGAAAAGAC 58.124 34.615 3.36 0.00 37.61 3.01
139 140 7.040409 TGAGCAAAATCTCCTTAAGAAAAGACC 60.040 37.037 3.36 0.00 37.61 3.85
140 141 6.777580 AGCAAAATCTCCTTAAGAAAAGACCA 59.222 34.615 3.36 0.00 37.61 4.02
141 142 6.863645 GCAAAATCTCCTTAAGAAAAGACCAC 59.136 38.462 3.36 0.00 37.61 4.16
142 143 7.255625 GCAAAATCTCCTTAAGAAAAGACCACT 60.256 37.037 3.36 0.00 37.61 4.00
143 144 7.987750 AAATCTCCTTAAGAAAAGACCACTC 57.012 36.000 3.36 0.00 37.61 3.51
144 145 5.485209 TCTCCTTAAGAAAAGACCACTCC 57.515 43.478 3.36 0.00 0.00 3.85
145 146 4.905456 TCTCCTTAAGAAAAGACCACTCCA 59.095 41.667 3.36 0.00 0.00 3.86
146 147 4.969484 TCCTTAAGAAAAGACCACTCCAC 58.031 43.478 3.36 0.00 0.00 4.02
147 148 4.658901 TCCTTAAGAAAAGACCACTCCACT 59.341 41.667 3.36 0.00 0.00 4.00
148 149 4.998033 CCTTAAGAAAAGACCACTCCACTC 59.002 45.833 3.36 0.00 0.00 3.51
149 150 2.821991 AGAAAAGACCACTCCACTCG 57.178 50.000 0.00 0.00 0.00 4.18
150 151 2.317040 AGAAAAGACCACTCCACTCGA 58.683 47.619 0.00 0.00 0.00 4.04
151 152 2.900546 AGAAAAGACCACTCCACTCGAT 59.099 45.455 0.00 0.00 0.00 3.59
152 153 3.056465 AGAAAAGACCACTCCACTCGATC 60.056 47.826 0.00 0.00 0.00 3.69
153 154 1.924731 AAGACCACTCCACTCGATCA 58.075 50.000 0.00 0.00 0.00 2.92
154 155 2.151502 AGACCACTCCACTCGATCAT 57.848 50.000 0.00 0.00 0.00 2.45
155 156 3.298686 AGACCACTCCACTCGATCATA 57.701 47.619 0.00 0.00 0.00 2.15
156 157 2.952978 AGACCACTCCACTCGATCATAC 59.047 50.000 0.00 0.00 0.00 2.39
157 158 1.676529 ACCACTCCACTCGATCATACG 59.323 52.381 0.00 0.00 0.00 3.06
158 159 1.676529 CCACTCCACTCGATCATACGT 59.323 52.381 0.00 0.00 34.70 3.57
159 160 2.287069 CCACTCCACTCGATCATACGTC 60.287 54.545 0.00 0.00 34.70 4.34
160 161 2.614520 CACTCCACTCGATCATACGTCT 59.385 50.000 0.00 0.00 34.70 4.18
161 162 3.065510 CACTCCACTCGATCATACGTCTT 59.934 47.826 0.00 0.00 34.70 3.01
162 163 4.272748 CACTCCACTCGATCATACGTCTTA 59.727 45.833 0.00 0.00 34.70 2.10
163 164 5.049336 CACTCCACTCGATCATACGTCTTAT 60.049 44.000 0.00 0.00 34.70 1.73
164 165 5.049336 ACTCCACTCGATCATACGTCTTATG 60.049 44.000 0.00 0.00 39.31 1.90
165 166 3.914966 CCACTCGATCATACGTCTTATGC 59.085 47.826 0.00 0.00 38.01 3.14
166 167 4.537015 CACTCGATCATACGTCTTATGCA 58.463 43.478 0.00 0.00 38.01 3.96
167 168 5.157067 CACTCGATCATACGTCTTATGCAT 58.843 41.667 3.79 3.79 38.01 3.96
168 169 6.314784 CACTCGATCATACGTCTTATGCATA 58.685 40.000 1.16 1.16 38.01 3.14
169 170 6.969473 CACTCGATCATACGTCTTATGCATAT 59.031 38.462 7.36 0.00 38.01 1.78
170 171 7.164990 CACTCGATCATACGTCTTATGCATATC 59.835 40.741 7.36 0.00 38.01 1.63
171 172 6.495706 TCGATCATACGTCTTATGCATATCC 58.504 40.000 7.36 0.00 38.01 2.59
172 173 6.094881 TCGATCATACGTCTTATGCATATCCA 59.905 38.462 7.36 0.00 38.01 3.41
173 174 6.751888 CGATCATACGTCTTATGCATATCCAA 59.248 38.462 7.36 0.00 38.01 3.53
174 175 7.436376 CGATCATACGTCTTATGCATATCCAAT 59.564 37.037 7.36 0.00 38.01 3.16
175 176 9.102757 GATCATACGTCTTATGCATATCCAATT 57.897 33.333 7.36 0.00 38.01 2.32
176 177 8.846943 TCATACGTCTTATGCATATCCAATTT 57.153 30.769 7.36 0.00 38.01 1.82
177 178 9.936759 TCATACGTCTTATGCATATCCAATTTA 57.063 29.630 7.36 0.00 38.01 1.40
181 182 8.514594 ACGTCTTATGCATATCCAATTTAATGG 58.485 33.333 7.36 0.00 42.12 3.16
182 183 7.485913 CGTCTTATGCATATCCAATTTAATGGC 59.514 37.037 7.36 0.00 40.46 4.40
183 184 8.306038 GTCTTATGCATATCCAATTTAATGGCA 58.694 33.333 7.36 0.00 40.46 4.92
184 185 8.306038 TCTTATGCATATCCAATTTAATGGCAC 58.694 33.333 7.36 0.00 40.46 5.01
200 201 0.881796 GCACACAAGCCCTCTTTACC 59.118 55.000 0.00 0.00 0.00 2.85
201 202 1.534729 CACACAAGCCCTCTTTACCC 58.465 55.000 0.00 0.00 0.00 3.69
202 203 1.073923 CACACAAGCCCTCTTTACCCT 59.926 52.381 0.00 0.00 0.00 4.34
203 204 1.780919 ACACAAGCCCTCTTTACCCTT 59.219 47.619 0.00 0.00 0.00 3.95
204 205 2.177016 ACACAAGCCCTCTTTACCCTTT 59.823 45.455 0.00 0.00 0.00 3.11
205 206 3.230976 CACAAGCCCTCTTTACCCTTTT 58.769 45.455 0.00 0.00 0.00 2.27
206 207 3.641436 CACAAGCCCTCTTTACCCTTTTT 59.359 43.478 0.00 0.00 0.00 1.94
235 236 3.979101 TGTGAAGACACTCATATGCCA 57.021 42.857 0.00 0.00 46.07 4.92
236 237 3.599343 TGTGAAGACACTCATATGCCAC 58.401 45.455 0.00 0.00 46.07 5.01
237 238 3.007831 TGTGAAGACACTCATATGCCACA 59.992 43.478 0.00 0.00 46.07 4.17
238 239 4.002982 GTGAAGACACTCATATGCCACAA 58.997 43.478 0.00 0.00 42.99 3.33
239 240 4.455533 GTGAAGACACTCATATGCCACAAA 59.544 41.667 0.00 0.00 42.99 2.83
240 241 5.048782 GTGAAGACACTCATATGCCACAAAA 60.049 40.000 0.00 0.00 42.99 2.44
241 242 5.534278 TGAAGACACTCATATGCCACAAAAA 59.466 36.000 0.00 0.00 0.00 1.94
242 243 6.209192 TGAAGACACTCATATGCCACAAAAAT 59.791 34.615 0.00 0.00 0.00 1.82
243 244 7.392953 TGAAGACACTCATATGCCACAAAAATA 59.607 33.333 0.00 0.00 0.00 1.40
244 245 7.886629 AGACACTCATATGCCACAAAAATAT 57.113 32.000 0.00 0.00 0.00 1.28
245 246 8.297470 AGACACTCATATGCCACAAAAATATT 57.703 30.769 0.00 0.00 0.00 1.28
246 247 9.407380 AGACACTCATATGCCACAAAAATATTA 57.593 29.630 0.00 0.00 0.00 0.98
269 270 6.992063 ATCTGTAATCATTTGTCCAGACAC 57.008 37.500 0.00 0.00 41.67 3.67
270 271 5.863965 TCTGTAATCATTTGTCCAGACACA 58.136 37.500 0.00 0.00 41.67 3.72
271 272 6.295249 TCTGTAATCATTTGTCCAGACACAA 58.705 36.000 0.00 0.00 41.67 3.33
273 274 6.734137 TGTAATCATTTGTCCAGACACAAAC 58.266 36.000 0.00 0.00 46.45 2.93
274 275 3.961477 TCATTTGTCCAGACACAAACG 57.039 42.857 0.00 0.00 46.45 3.60
275 276 2.032799 TCATTTGTCCAGACACAAACGC 59.967 45.455 0.00 0.00 46.45 4.84
276 277 1.454201 TTTGTCCAGACACAAACGCA 58.546 45.000 0.00 0.00 40.57 5.24
277 278 0.730265 TTGTCCAGACACAAACGCAC 59.270 50.000 0.00 0.00 41.67 5.34
278 279 0.107897 TGTCCAGACACAAACGCACT 60.108 50.000 0.00 0.00 36.21 4.40
279 280 0.582005 GTCCAGACACAAACGCACTC 59.418 55.000 0.00 0.00 0.00 3.51
280 281 0.464036 TCCAGACACAAACGCACTCT 59.536 50.000 0.00 0.00 0.00 3.24
281 282 0.583438 CCAGACACAAACGCACTCTG 59.417 55.000 0.00 0.00 0.00 3.35
282 283 1.570813 CAGACACAAACGCACTCTGA 58.429 50.000 0.00 0.00 31.69 3.27
283 284 1.524355 CAGACACAAACGCACTCTGAG 59.476 52.381 2.45 2.45 31.69 3.35
284 285 1.137086 AGACACAAACGCACTCTGAGT 59.863 47.619 4.06 4.06 29.66 3.41
285 286 1.523095 GACACAAACGCACTCTGAGTC 59.477 52.381 7.49 2.53 27.87 3.36
286 287 1.137086 ACACAAACGCACTCTGAGTCT 59.863 47.619 7.49 0.00 27.87 3.24
287 288 2.205074 CACAAACGCACTCTGAGTCTT 58.795 47.619 7.49 0.00 27.87 3.01
288 289 3.181479 ACACAAACGCACTCTGAGTCTTA 60.181 43.478 7.49 0.00 27.87 2.10
289 290 3.990469 CACAAACGCACTCTGAGTCTTAT 59.010 43.478 7.49 0.00 27.87 1.73
290 291 4.449068 CACAAACGCACTCTGAGTCTTATT 59.551 41.667 7.49 0.00 27.87 1.40
291 292 5.050091 CACAAACGCACTCTGAGTCTTATTT 60.050 40.000 7.49 4.00 27.87 1.40
292 293 6.145534 CACAAACGCACTCTGAGTCTTATTTA 59.854 38.462 7.49 0.00 27.87 1.40
293 294 6.874134 ACAAACGCACTCTGAGTCTTATTTAT 59.126 34.615 7.49 0.00 27.87 1.40
294 295 6.893958 AACGCACTCTGAGTCTTATTTATG 57.106 37.500 7.49 0.00 27.87 1.90
295 296 6.208988 ACGCACTCTGAGTCTTATTTATGA 57.791 37.500 7.49 0.00 0.00 2.15
296 297 6.810911 ACGCACTCTGAGTCTTATTTATGAT 58.189 36.000 7.49 0.00 0.00 2.45
297 298 7.941919 ACGCACTCTGAGTCTTATTTATGATA 58.058 34.615 7.49 0.00 0.00 2.15
298 299 8.580720 ACGCACTCTGAGTCTTATTTATGATAT 58.419 33.333 7.49 0.00 0.00 1.63
299 300 9.071221 CGCACTCTGAGTCTTATTTATGATATC 57.929 37.037 7.49 0.00 0.00 1.63
319 320 9.784531 TGATATCTGAAAGGATTATCTTCAACC 57.215 33.333 3.98 0.00 0.00 3.77
320 321 9.784531 GATATCTGAAAGGATTATCTTCAACCA 57.215 33.333 0.00 0.00 0.00 3.67
321 322 9.790344 ATATCTGAAAGGATTATCTTCAACCAG 57.210 33.333 0.00 0.00 0.00 4.00
322 323 6.418101 TCTGAAAGGATTATCTTCAACCAGG 58.582 40.000 0.00 0.00 0.00 4.45
323 324 4.949856 TGAAAGGATTATCTTCAACCAGGC 59.050 41.667 0.00 0.00 0.00 4.85
324 325 3.584733 AGGATTATCTTCAACCAGGCC 57.415 47.619 0.00 0.00 0.00 5.19
325 326 2.158755 AGGATTATCTTCAACCAGGCCG 60.159 50.000 0.00 0.00 0.00 6.13
326 327 1.604278 GATTATCTTCAACCAGGCCGC 59.396 52.381 0.00 0.00 0.00 6.53
327 328 0.326595 TTATCTTCAACCAGGCCGCA 59.673 50.000 0.00 0.00 0.00 5.69
328 329 0.326595 TATCTTCAACCAGGCCGCAA 59.673 50.000 0.00 0.00 0.00 4.85
329 330 0.323725 ATCTTCAACCAGGCCGCAAT 60.324 50.000 0.00 0.00 0.00 3.56
330 331 0.960364 TCTTCAACCAGGCCGCAATC 60.960 55.000 0.00 0.00 0.00 2.67
331 332 1.228398 TTCAACCAGGCCGCAATCA 60.228 52.632 0.00 0.00 0.00 2.57
332 333 0.611618 TTCAACCAGGCCGCAATCAT 60.612 50.000 0.00 0.00 0.00 2.45
333 334 0.611618 TCAACCAGGCCGCAATCATT 60.612 50.000 0.00 0.00 0.00 2.57
334 335 0.247185 CAACCAGGCCGCAATCATTT 59.753 50.000 0.00 0.00 0.00 2.32
335 336 0.975887 AACCAGGCCGCAATCATTTT 59.024 45.000 0.00 0.00 0.00 1.82
336 337 0.975887 ACCAGGCCGCAATCATTTTT 59.024 45.000 0.00 0.00 0.00 1.94
337 338 1.338011 ACCAGGCCGCAATCATTTTTG 60.338 47.619 0.00 0.00 0.00 2.44
338 339 1.067000 CCAGGCCGCAATCATTTTTGA 60.067 47.619 0.00 0.00 0.00 2.69
339 340 2.264813 CAGGCCGCAATCATTTTTGAG 58.735 47.619 0.00 0.00 0.00 3.02
340 341 2.094597 CAGGCCGCAATCATTTTTGAGA 60.095 45.455 0.00 0.00 0.00 3.27
341 342 2.762327 AGGCCGCAATCATTTTTGAGAT 59.238 40.909 0.00 0.00 0.00 2.75
342 343 3.196254 AGGCCGCAATCATTTTTGAGATT 59.804 39.130 0.00 0.00 34.96 2.40
343 344 4.402155 AGGCCGCAATCATTTTTGAGATTA 59.598 37.500 0.00 0.00 33.41 1.75
344 345 4.741676 GGCCGCAATCATTTTTGAGATTAG 59.258 41.667 0.00 0.00 33.41 1.73
345 346 5.343249 GCCGCAATCATTTTTGAGATTAGT 58.657 37.500 0.00 0.00 33.41 2.24
346 347 5.807011 GCCGCAATCATTTTTGAGATTAGTT 59.193 36.000 0.00 0.00 33.41 2.24
347 348 6.311200 GCCGCAATCATTTTTGAGATTAGTTT 59.689 34.615 0.00 0.00 33.41 2.66
348 349 7.669098 CCGCAATCATTTTTGAGATTAGTTTG 58.331 34.615 0.00 0.00 33.41 2.93
349 350 7.329226 CCGCAATCATTTTTGAGATTAGTTTGT 59.671 33.333 0.00 0.00 33.41 2.83
350 351 9.340695 CGCAATCATTTTTGAGATTAGTTTGTA 57.659 29.630 0.00 0.00 33.41 2.41
354 355 9.825972 ATCATTTTTGAGATTAGTTTGTACACG 57.174 29.630 0.00 0.00 0.00 4.49
355 356 9.047371 TCATTTTTGAGATTAGTTTGTACACGA 57.953 29.630 0.00 0.00 0.00 4.35
356 357 9.103048 CATTTTTGAGATTAGTTTGTACACGAC 57.897 33.333 0.00 0.00 0.00 4.34
357 358 7.773864 TTTTGAGATTAGTTTGTACACGACA 57.226 32.000 0.00 0.00 35.78 4.35
358 359 7.956420 TTTGAGATTAGTTTGTACACGACAT 57.044 32.000 0.00 0.00 38.07 3.06
359 360 7.956420 TTGAGATTAGTTTGTACACGACATT 57.044 32.000 0.00 0.00 38.07 2.71
360 361 9.478768 TTTGAGATTAGTTTGTACACGACATTA 57.521 29.630 0.00 0.00 38.07 1.90
361 362 9.647797 TTGAGATTAGTTTGTACACGACATTAT 57.352 29.630 0.00 0.00 38.07 1.28
368 369 8.997621 AGTTTGTACACGACATTATACAGATT 57.002 30.769 0.00 0.00 38.07 2.40
375 376 8.958119 ACACGACATTATACAGATTAATTGGT 57.042 30.769 0.00 0.00 0.00 3.67
376 377 9.042008 ACACGACATTATACAGATTAATTGGTC 57.958 33.333 0.00 0.00 0.00 4.02
377 378 9.261180 CACGACATTATACAGATTAATTGGTCT 57.739 33.333 0.00 0.00 0.00 3.85
392 393 9.990868 ATTAATTGGTCTAAATTGAGTTACCCT 57.009 29.630 0.00 0.00 32.16 4.34
393 394 9.816787 TTAATTGGTCTAAATTGAGTTACCCTT 57.183 29.630 0.00 0.00 32.16 3.95
394 395 8.721133 AATTGGTCTAAATTGAGTTACCCTTT 57.279 30.769 0.00 0.00 0.00 3.11
395 396 7.754851 TTGGTCTAAATTGAGTTACCCTTTC 57.245 36.000 0.00 0.00 0.00 2.62
396 397 6.243148 TGGTCTAAATTGAGTTACCCTTTCC 58.757 40.000 0.00 0.00 0.00 3.13
397 398 5.353400 GGTCTAAATTGAGTTACCCTTTCCG 59.647 44.000 0.00 0.00 0.00 4.30
398 399 5.353400 GTCTAAATTGAGTTACCCTTTCCGG 59.647 44.000 0.00 0.00 0.00 5.14
399 400 4.376225 AAATTGAGTTACCCTTTCCGGA 57.624 40.909 0.00 0.00 33.16 5.14
400 401 3.629142 ATTGAGTTACCCTTTCCGGAG 57.371 47.619 3.34 0.00 33.16 4.63
401 402 2.019807 TGAGTTACCCTTTCCGGAGT 57.980 50.000 3.34 1.01 33.16 3.85
402 403 3.173953 TGAGTTACCCTTTCCGGAGTA 57.826 47.619 3.34 0.00 33.16 2.59
403 404 3.716431 TGAGTTACCCTTTCCGGAGTAT 58.284 45.455 3.34 0.00 33.16 2.12
404 405 4.098894 TGAGTTACCCTTTCCGGAGTATT 58.901 43.478 3.34 0.00 33.16 1.89
405 406 4.081309 TGAGTTACCCTTTCCGGAGTATTG 60.081 45.833 3.34 0.00 33.16 1.90
406 407 4.098894 AGTTACCCTTTCCGGAGTATTGA 58.901 43.478 3.34 0.00 33.16 2.57
407 408 4.081254 AGTTACCCTTTCCGGAGTATTGAC 60.081 45.833 3.34 0.00 33.16 3.18
408 409 1.558294 ACCCTTTCCGGAGTATTGACC 59.442 52.381 3.34 0.00 33.16 4.02
409 410 1.838077 CCCTTTCCGGAGTATTGACCT 59.162 52.381 3.34 0.00 33.16 3.85
410 411 2.238898 CCCTTTCCGGAGTATTGACCTT 59.761 50.000 3.34 0.00 33.16 3.50
411 412 3.308188 CCCTTTCCGGAGTATTGACCTTT 60.308 47.826 3.34 0.00 33.16 3.11
412 413 3.689649 CCTTTCCGGAGTATTGACCTTTG 59.310 47.826 3.34 0.00 33.16 2.77
413 414 4.324267 CTTTCCGGAGTATTGACCTTTGT 58.676 43.478 3.34 0.00 0.00 2.83
414 415 4.360951 TTCCGGAGTATTGACCTTTGTT 57.639 40.909 3.34 0.00 0.00 2.83
415 416 4.360951 TCCGGAGTATTGACCTTTGTTT 57.639 40.909 0.00 0.00 0.00 2.83
416 417 5.486735 TCCGGAGTATTGACCTTTGTTTA 57.513 39.130 0.00 0.00 0.00 2.01
417 418 5.867330 TCCGGAGTATTGACCTTTGTTTAA 58.133 37.500 0.00 0.00 0.00 1.52
418 419 5.702209 TCCGGAGTATTGACCTTTGTTTAAC 59.298 40.000 0.00 0.00 0.00 2.01
419 420 5.470777 CCGGAGTATTGACCTTTGTTTAACA 59.529 40.000 0.00 0.00 0.00 2.41
420 421 6.348213 CCGGAGTATTGACCTTTGTTTAACAG 60.348 42.308 0.00 0.00 0.00 3.16
421 422 6.204108 CGGAGTATTGACCTTTGTTTAACAGT 59.796 38.462 0.00 0.00 0.00 3.55
422 423 7.570691 CGGAGTATTGACCTTTGTTTAACAGTC 60.571 40.741 8.44 8.44 0.00 3.51
423 424 7.186021 AGTATTGACCTTTGTTTAACAGTCG 57.814 36.000 10.07 0.43 0.00 4.18
424 425 6.764560 AGTATTGACCTTTGTTTAACAGTCGT 59.235 34.615 10.07 3.11 0.00 4.34
425 426 5.883503 TTGACCTTTGTTTAACAGTCGTT 57.116 34.783 10.07 0.00 39.24 3.85
426 427 5.224562 TGACCTTTGTTTAACAGTCGTTG 57.775 39.130 10.07 0.00 36.52 4.10
427 428 4.023739 ACCTTTGTTTAACAGTCGTTGC 57.976 40.909 0.00 0.00 36.52 4.17
428 429 3.440872 ACCTTTGTTTAACAGTCGTTGCA 59.559 39.130 0.00 0.00 36.52 4.08
429 430 3.789224 CCTTTGTTTAACAGTCGTTGCAC 59.211 43.478 0.00 0.00 36.52 4.57
430 431 4.407818 CTTTGTTTAACAGTCGTTGCACA 58.592 39.130 0.00 0.00 36.52 4.57
431 432 3.666883 TGTTTAACAGTCGTTGCACAG 57.333 42.857 0.00 0.00 36.52 3.66
432 433 3.263261 TGTTTAACAGTCGTTGCACAGA 58.737 40.909 0.00 0.00 36.52 3.41
433 434 3.874543 TGTTTAACAGTCGTTGCACAGAT 59.125 39.130 0.00 0.00 36.52 2.90
434 435 4.334203 TGTTTAACAGTCGTTGCACAGATT 59.666 37.500 0.00 0.00 36.52 2.40
435 436 5.524281 TGTTTAACAGTCGTTGCACAGATTA 59.476 36.000 0.00 0.00 36.52 1.75
436 437 6.203915 TGTTTAACAGTCGTTGCACAGATTAT 59.796 34.615 0.00 0.00 36.52 1.28
437 438 4.928661 AACAGTCGTTGCACAGATTATC 57.071 40.909 0.00 0.00 32.81 1.75
469 470 4.501559 TCTCGTCTTTGTTTAACAGTCGTG 59.498 41.667 0.00 4.14 0.00 4.35
721 722 2.361357 CCGTCCACTCCTCTCCGT 60.361 66.667 0.00 0.00 0.00 4.69
848 849 3.107642 ACCGTTGTACTCTGTTTCTGG 57.892 47.619 0.00 0.00 0.00 3.86
850 851 3.638160 ACCGTTGTACTCTGTTTCTGGTA 59.362 43.478 0.00 0.00 0.00 3.25
1339 1363 1.446366 GAGGGCGTGGAGTATTCCC 59.554 63.158 1.20 0.00 43.33 3.97
1494 1518 0.934901 CCGTGTCGACCATATCAGCG 60.935 60.000 14.12 4.77 0.00 5.18
1522 1546 4.688021 GGTGTTCAATTGTGCCTTGTTTA 58.312 39.130 5.13 0.00 0.00 2.01
1527 1551 0.386731 ATTGTGCCTTGTTTACGCGC 60.387 50.000 5.73 0.00 0.00 6.86
1577 1601 2.700371 AGACAGTGAGTGGTGTGATTGA 59.300 45.455 0.00 0.00 0.00 2.57
1584 1608 0.607489 GTGGTGTGATTGAGCTGGCT 60.607 55.000 0.00 0.00 0.00 4.75
1776 1800 2.736682 CGTTGTGGGCGGACGATTC 61.737 63.158 0.00 0.00 38.99 2.52
1938 1962 1.003580 ACATCGATGAAGCCAAGGTGT 59.996 47.619 31.33 3.01 0.00 4.16
1980 2004 1.474320 GCACTACCAATGGCGGTATCA 60.474 52.381 0.00 0.00 40.74 2.15
2050 2074 2.198827 TAACCATGGTGAGCTTGGTG 57.801 50.000 20.60 0.00 42.85 4.17
2364 2388 1.256376 CTTCGAGATTGCCGATGTTCG 59.744 52.381 0.00 0.00 40.07 3.95
2526 2550 3.866449 GCTTCTCGGAGGATTCACAAGTT 60.866 47.826 4.96 0.00 0.00 2.66
3090 3114 3.130516 CGGATGTCTACAGCTTTGGAGTA 59.869 47.826 0.00 0.00 31.98 2.59
3213 3237 0.822532 CTGGCATCCTTGATCCAGCC 60.823 60.000 0.00 0.00 39.53 4.85
3216 3240 1.143684 GGCATCCTTGATCCAGCCTTA 59.856 52.381 0.00 0.00 39.02 2.69
3273 3297 2.431942 GCTGTGGCATGCAAGTGC 60.432 61.111 21.36 11.68 44.31 4.40
3405 3429 1.270358 ACTGAAGTTGTTCTCGGGAGC 60.270 52.381 0.00 0.00 33.38 4.70
3462 3486 2.645730 ATCAGTCGTGCTCAGAGAAC 57.354 50.000 0.00 0.00 0.00 3.01
3886 3912 5.456822 GCATTTCTTTGTAGATTGATTCGGC 59.543 40.000 0.00 0.00 0.00 5.54
3920 3946 3.195661 GGCACTTCTATTTACGAGTGGG 58.804 50.000 4.73 0.00 39.80 4.61
3925 3952 1.135527 TCTATTTACGAGTGGGTGGCG 59.864 52.381 0.00 0.00 0.00 5.69
3978 4005 5.060569 GCAGATACGTGTAAGTGTGTAGTTG 59.939 44.000 0.00 0.00 0.00 3.16
3979 4006 6.147581 CAGATACGTGTAAGTGTGTAGTTGT 58.852 40.000 0.00 0.00 0.00 3.32
3980 4007 6.639686 CAGATACGTGTAAGTGTGTAGTTGTT 59.360 38.462 0.00 0.00 0.00 2.83
4038 4065 4.921470 AATATTCTCGTTCACCGTGTTG 57.079 40.909 0.00 0.00 37.94 3.33
4213 4242 3.997021 CACGGTTTGTCTGCTAATCTTCT 59.003 43.478 0.00 0.00 0.00 2.85
4250 4279 1.241315 ATTTTCAGTGGCCCGGTTCG 61.241 55.000 0.00 0.00 0.00 3.95
4297 4326 4.877823 TGTCATCTGCCATGATCTGTTTAC 59.122 41.667 0.00 0.00 0.00 2.01
4321 4350 4.209452 TGTTGCTTTCGAGACAATGAAC 57.791 40.909 0.00 0.00 0.00 3.18
4502 4533 6.016024 ACACATGCATGACAGTAACTTTGATT 60.016 34.615 32.75 1.36 0.00 2.57
4531 4562 8.710835 TTTTTCATTCTTGGTTTGGTTTAGTC 57.289 30.769 0.00 0.00 0.00 2.59
4532 4563 7.654022 TTTCATTCTTGGTTTGGTTTAGTCT 57.346 32.000 0.00 0.00 0.00 3.24
4533 4564 7.654022 TTCATTCTTGGTTTGGTTTAGTCTT 57.346 32.000 0.00 0.00 0.00 3.01
4534 4565 7.654022 TCATTCTTGGTTTGGTTTAGTCTTT 57.346 32.000 0.00 0.00 0.00 2.52
4535 4566 7.488322 TCATTCTTGGTTTGGTTTAGTCTTTG 58.512 34.615 0.00 0.00 0.00 2.77
4536 4567 6.844097 TTCTTGGTTTGGTTTAGTCTTTGT 57.156 33.333 0.00 0.00 0.00 2.83
4537 4568 6.844097 TCTTGGTTTGGTTTAGTCTTTGTT 57.156 33.333 0.00 0.00 0.00 2.83
4538 4569 6.626302 TCTTGGTTTGGTTTAGTCTTTGTTG 58.374 36.000 0.00 0.00 0.00 3.33
4539 4570 6.434652 TCTTGGTTTGGTTTAGTCTTTGTTGA 59.565 34.615 0.00 0.00 0.00 3.18
4540 4571 6.783708 TGGTTTGGTTTAGTCTTTGTTGAT 57.216 33.333 0.00 0.00 0.00 2.57
4541 4572 7.176589 TGGTTTGGTTTAGTCTTTGTTGATT 57.823 32.000 0.00 0.00 0.00 2.57
4542 4573 7.616313 TGGTTTGGTTTAGTCTTTGTTGATTT 58.384 30.769 0.00 0.00 0.00 2.17
4543 4574 8.097662 TGGTTTGGTTTAGTCTTTGTTGATTTT 58.902 29.630 0.00 0.00 0.00 1.82
4544 4575 8.941977 GGTTTGGTTTAGTCTTTGTTGATTTTT 58.058 29.630 0.00 0.00 0.00 1.94
4545 4576 9.753669 GTTTGGTTTAGTCTTTGTTGATTTTTG 57.246 29.630 0.00 0.00 0.00 2.44
4546 4577 9.495572 TTTGGTTTAGTCTTTGTTGATTTTTGT 57.504 25.926 0.00 0.00 0.00 2.83
4547 4578 8.696410 TGGTTTAGTCTTTGTTGATTTTTGTC 57.304 30.769 0.00 0.00 0.00 3.18
4548 4579 8.527810 TGGTTTAGTCTTTGTTGATTTTTGTCT 58.472 29.630 0.00 0.00 0.00 3.41
4549 4580 9.366216 GGTTTAGTCTTTGTTGATTTTTGTCTT 57.634 29.630 0.00 0.00 0.00 3.01
4553 4584 8.293699 AGTCTTTGTTGATTTTTGTCTTAGGT 57.706 30.769 0.00 0.00 0.00 3.08
4554 4585 9.403583 AGTCTTTGTTGATTTTTGTCTTAGGTA 57.596 29.630 0.00 0.00 0.00 3.08
4555 4586 9.447040 GTCTTTGTTGATTTTTGTCTTAGGTAC 57.553 33.333 0.00 0.00 0.00 3.34
4556 4587 9.403583 TCTTTGTTGATTTTTGTCTTAGGTACT 57.596 29.630 0.00 0.00 46.37 2.73
4566 4597 9.979578 TTTTTGTCTTAGGTACTTATACGTTGA 57.020 29.630 0.00 0.00 41.75 3.18
4568 4599 9.577110 TTTGTCTTAGGTACTTATACGTTGATG 57.423 33.333 0.00 0.00 41.75 3.07
4569 4600 7.709947 TGTCTTAGGTACTTATACGTTGATGG 58.290 38.462 0.00 0.00 41.75 3.51
4570 4601 7.144000 GTCTTAGGTACTTATACGTTGATGGG 58.856 42.308 0.00 0.00 41.75 4.00
4571 4602 4.332428 AGGTACTTATACGTTGATGGGC 57.668 45.455 0.00 0.00 27.25 5.36
4572 4603 3.965347 AGGTACTTATACGTTGATGGGCT 59.035 43.478 0.00 0.00 27.25 5.19
4573 4604 4.407945 AGGTACTTATACGTTGATGGGCTT 59.592 41.667 0.00 0.00 27.25 4.35
4574 4605 4.748600 GGTACTTATACGTTGATGGGCTTC 59.251 45.833 0.00 0.00 31.40 3.86
4575 4606 4.755266 ACTTATACGTTGATGGGCTTCT 57.245 40.909 0.00 0.00 0.00 2.85
4576 4607 5.864418 ACTTATACGTTGATGGGCTTCTA 57.136 39.130 0.00 0.00 0.00 2.10
4577 4608 6.420913 ACTTATACGTTGATGGGCTTCTAT 57.579 37.500 0.00 0.00 0.00 1.98
4578 4609 6.223852 ACTTATACGTTGATGGGCTTCTATG 58.776 40.000 0.00 0.00 0.00 2.23
4579 4610 2.332063 ACGTTGATGGGCTTCTATGG 57.668 50.000 0.00 0.00 0.00 2.74
4580 4611 1.134098 ACGTTGATGGGCTTCTATGGG 60.134 52.381 0.00 0.00 0.00 4.00
4581 4612 1.322442 GTTGATGGGCTTCTATGGGC 58.678 55.000 0.00 0.00 0.00 5.36
4582 4613 1.133668 GTTGATGGGCTTCTATGGGCT 60.134 52.381 0.00 0.00 0.00 5.19
4583 4614 2.106511 GTTGATGGGCTTCTATGGGCTA 59.893 50.000 0.00 0.00 0.00 3.93
4584 4615 2.417652 TGATGGGCTTCTATGGGCTAA 58.582 47.619 0.00 0.00 0.00 3.09
4585 4616 2.988859 TGATGGGCTTCTATGGGCTAAT 59.011 45.455 0.00 0.00 0.00 1.73
4586 4617 3.398967 TGATGGGCTTCTATGGGCTAATT 59.601 43.478 0.00 0.00 0.00 1.40
4587 4618 4.601420 TGATGGGCTTCTATGGGCTAATTA 59.399 41.667 0.00 0.00 0.00 1.40
4588 4619 5.074377 TGATGGGCTTCTATGGGCTAATTAA 59.926 40.000 0.00 0.00 0.00 1.40
4589 4620 5.396057 TGGGCTTCTATGGGCTAATTAAA 57.604 39.130 0.00 0.00 0.00 1.52
4590 4621 5.964288 TGGGCTTCTATGGGCTAATTAAAT 58.036 37.500 0.00 0.00 0.00 1.40
4591 4622 5.774690 TGGGCTTCTATGGGCTAATTAAATG 59.225 40.000 0.00 0.00 0.00 2.32
4592 4623 6.010219 GGGCTTCTATGGGCTAATTAAATGA 58.990 40.000 0.00 0.00 0.00 2.57
4593 4624 6.151817 GGGCTTCTATGGGCTAATTAAATGAG 59.848 42.308 0.00 0.00 0.00 2.90
4594 4625 6.151817 GGCTTCTATGGGCTAATTAAATGAGG 59.848 42.308 0.00 0.00 0.00 3.86
4595 4626 6.942576 GCTTCTATGGGCTAATTAAATGAGGA 59.057 38.462 0.00 0.00 0.00 3.71
4596 4627 7.448469 GCTTCTATGGGCTAATTAAATGAGGAA 59.552 37.037 0.00 0.00 0.00 3.36
4597 4628 9.525826 CTTCTATGGGCTAATTAAATGAGGAAT 57.474 33.333 0.00 0.00 0.00 3.01
4598 4629 9.881773 TTCTATGGGCTAATTAAATGAGGAATT 57.118 29.630 0.00 0.00 0.00 2.17
4599 4630 9.881773 TCTATGGGCTAATTAAATGAGGAATTT 57.118 29.630 0.00 0.00 41.47 1.82
4600 4631 9.918630 CTATGGGCTAATTAAATGAGGAATTTG 57.081 33.333 0.00 0.00 38.93 2.32
4601 4632 7.969690 TGGGCTAATTAAATGAGGAATTTGA 57.030 32.000 0.00 0.00 38.93 2.69
4602 4633 8.010733 TGGGCTAATTAAATGAGGAATTTGAG 57.989 34.615 0.00 0.00 38.93 3.02
4603 4634 7.069826 TGGGCTAATTAAATGAGGAATTTGAGG 59.930 37.037 0.00 0.00 38.93 3.86
4604 4635 7.069950 GGGCTAATTAAATGAGGAATTTGAGGT 59.930 37.037 0.00 0.00 38.93 3.85
4605 4636 9.131791 GGCTAATTAAATGAGGAATTTGAGGTA 57.868 33.333 0.00 0.00 38.93 3.08
4612 4643 7.855784 AATGAGGAATTTGAGGTAAAAAGGT 57.144 32.000 0.00 0.00 0.00 3.50
4613 4644 8.950007 AATGAGGAATTTGAGGTAAAAAGGTA 57.050 30.769 0.00 0.00 0.00 3.08
4614 4645 7.996098 TGAGGAATTTGAGGTAAAAAGGTAG 57.004 36.000 0.00 0.00 0.00 3.18
4615 4646 6.946009 TGAGGAATTTGAGGTAAAAAGGTAGG 59.054 38.462 0.00 0.00 0.00 3.18
4616 4647 7.098845 AGGAATTTGAGGTAAAAAGGTAGGA 57.901 36.000 0.00 0.00 0.00 2.94
4617 4648 7.709601 AGGAATTTGAGGTAAAAAGGTAGGAT 58.290 34.615 0.00 0.00 0.00 3.24
4618 4649 8.842764 AGGAATTTGAGGTAAAAAGGTAGGATA 58.157 33.333 0.00 0.00 0.00 2.59
4619 4650 9.470399 GGAATTTGAGGTAAAAAGGTAGGATAA 57.530 33.333 0.00 0.00 0.00 1.75
4644 4675 9.929180 AATTAAAAAGAAGGATTTGTAGGCTTC 57.071 29.630 0.00 0.00 0.00 3.86
4645 4676 6.976934 AAAAAGAAGGATTTGTAGGCTTCA 57.023 33.333 0.00 0.00 0.00 3.02
4646 4677 6.976934 AAAAGAAGGATTTGTAGGCTTCAA 57.023 33.333 2.11 2.11 0.00 2.69
4647 4678 7.544804 AAAAGAAGGATTTGTAGGCTTCAAT 57.455 32.000 7.41 0.00 0.00 2.57
4648 4679 6.521151 AAGAAGGATTTGTAGGCTTCAATG 57.479 37.500 7.41 0.00 0.00 2.82
4649 4680 4.952335 AGAAGGATTTGTAGGCTTCAATGG 59.048 41.667 7.41 0.00 0.00 3.16
4650 4681 4.322057 AGGATTTGTAGGCTTCAATGGT 57.678 40.909 7.41 0.00 0.00 3.55
4651 4682 4.019174 AGGATTTGTAGGCTTCAATGGTG 58.981 43.478 7.41 0.00 0.00 4.17
4652 4683 3.131046 GGATTTGTAGGCTTCAATGGTGG 59.869 47.826 7.41 0.00 0.00 4.61
4653 4684 3.517296 TTTGTAGGCTTCAATGGTGGA 57.483 42.857 7.41 0.00 0.00 4.02
4654 4685 2.787473 TGTAGGCTTCAATGGTGGAG 57.213 50.000 0.00 0.00 32.83 3.86
4666 4697 8.147642 CTTCAATGGTGGAGCTACTAAATTAG 57.852 38.462 0.00 0.00 0.00 1.73
4667 4698 7.432148 TCAATGGTGGAGCTACTAAATTAGA 57.568 36.000 7.06 0.00 0.00 2.10
4668 4699 7.857456 TCAATGGTGGAGCTACTAAATTAGAA 58.143 34.615 7.06 0.00 0.00 2.10
4669 4700 8.325787 TCAATGGTGGAGCTACTAAATTAGAAA 58.674 33.333 7.06 0.00 0.00 2.52
4670 4701 8.956426 CAATGGTGGAGCTACTAAATTAGAAAA 58.044 33.333 7.06 0.00 0.00 2.29
4671 4702 9.528489 AATGGTGGAGCTACTAAATTAGAAAAA 57.472 29.630 7.06 0.00 0.00 1.94
4694 4725 7.946655 AAAAAGAAAGAATTTGATTCCCGAC 57.053 32.000 0.00 0.00 39.27 4.79
4695 4726 6.648879 AAAGAAAGAATTTGATTCCCGACA 57.351 33.333 0.00 0.00 39.27 4.35
4696 4727 6.648879 AAGAAAGAATTTGATTCCCGACAA 57.351 33.333 0.00 0.00 39.27 3.18
4697 4728 6.648879 AGAAAGAATTTGATTCCCGACAAA 57.351 33.333 0.00 0.00 39.27 2.83
4698 4729 7.049799 AGAAAGAATTTGATTCCCGACAAAA 57.950 32.000 0.00 0.00 39.27 2.44
4699 4730 7.496747 AGAAAGAATTTGATTCCCGACAAAAA 58.503 30.769 0.00 0.00 39.27 1.94
4700 4731 8.150296 AGAAAGAATTTGATTCCCGACAAAAAT 58.850 29.630 0.00 0.00 39.27 1.82
4701 4732 7.656707 AAGAATTTGATTCCCGACAAAAATG 57.343 32.000 0.00 0.00 40.13 2.32
4702 4733 6.165577 AGAATTTGATTCCCGACAAAAATGG 58.834 36.000 0.00 0.00 40.13 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.543714 TCGAGAGCTTCATACCTACTAGAG 58.456 45.833 0.00 0.00 0.00 2.43
3 4 5.548181 TCGAGAGCTTCATACCTACTAGA 57.452 43.478 0.00 0.00 0.00 2.43
4 5 6.811253 AATCGAGAGCTTCATACCTACTAG 57.189 41.667 0.00 0.00 0.00 2.57
5 6 6.999272 AGAAATCGAGAGCTTCATACCTACTA 59.001 38.462 0.00 0.00 0.00 1.82
6 7 5.830991 AGAAATCGAGAGCTTCATACCTACT 59.169 40.000 0.00 0.00 0.00 2.57
7 8 6.079424 AGAAATCGAGAGCTTCATACCTAC 57.921 41.667 0.00 0.00 0.00 3.18
8 9 6.716934 AAGAAATCGAGAGCTTCATACCTA 57.283 37.500 0.00 0.00 0.00 3.08
9 10 5.606348 AAGAAATCGAGAGCTTCATACCT 57.394 39.130 0.00 0.00 0.00 3.08
10 11 6.092807 ACAAAAGAAATCGAGAGCTTCATACC 59.907 38.462 0.00 0.00 0.00 2.73
11 12 7.066374 ACAAAAGAAATCGAGAGCTTCATAC 57.934 36.000 0.00 0.00 0.00 2.39
12 13 8.948631 ATACAAAAGAAATCGAGAGCTTCATA 57.051 30.769 0.00 0.00 0.00 2.15
13 14 7.856145 ATACAAAAGAAATCGAGAGCTTCAT 57.144 32.000 0.00 0.00 0.00 2.57
14 15 7.672983 AATACAAAAGAAATCGAGAGCTTCA 57.327 32.000 0.00 0.00 0.00 3.02
17 18 9.827411 GTTTTAATACAAAAGAAATCGAGAGCT 57.173 29.630 0.00 0.00 0.00 4.09
18 19 8.776802 CGTTTTAATACAAAAGAAATCGAGAGC 58.223 33.333 0.00 0.00 0.00 4.09
22 23 9.384682 GGTTCGTTTTAATACAAAAGAAATCGA 57.615 29.630 0.00 0.00 36.37 3.59
23 24 8.632551 GGGTTCGTTTTAATACAAAAGAAATCG 58.367 33.333 0.00 0.00 36.37 3.34
24 25 8.632551 CGGGTTCGTTTTAATACAAAAGAAATC 58.367 33.333 0.00 0.00 36.37 2.17
25 26 7.595875 CCGGGTTCGTTTTAATACAAAAGAAAT 59.404 33.333 0.00 0.00 36.37 2.17
26 27 6.916932 CCGGGTTCGTTTTAATACAAAAGAAA 59.083 34.615 0.00 0.00 36.37 2.52
27 28 6.039159 ACCGGGTTCGTTTTAATACAAAAGAA 59.961 34.615 6.32 0.00 33.46 2.52
28 29 5.530543 ACCGGGTTCGTTTTAATACAAAAGA 59.469 36.000 6.32 0.00 33.95 2.52
29 30 5.761003 ACCGGGTTCGTTTTAATACAAAAG 58.239 37.500 6.32 0.00 33.95 2.27
30 31 5.764487 ACCGGGTTCGTTTTAATACAAAA 57.236 34.783 6.32 0.00 33.95 2.44
31 32 7.361628 GGAATACCGGGTTCGTTTTAATACAAA 60.362 37.037 4.31 0.00 33.95 2.83
32 33 6.093357 GGAATACCGGGTTCGTTTTAATACAA 59.907 38.462 4.31 0.00 33.95 2.41
33 34 5.584251 GGAATACCGGGTTCGTTTTAATACA 59.416 40.000 4.31 0.00 33.95 2.29
34 35 5.584251 TGGAATACCGGGTTCGTTTTAATAC 59.416 40.000 4.31 0.00 39.42 1.89
35 36 5.738909 TGGAATACCGGGTTCGTTTTAATA 58.261 37.500 4.31 0.00 39.42 0.98
36 37 4.587891 TGGAATACCGGGTTCGTTTTAAT 58.412 39.130 4.31 0.00 39.42 1.40
37 38 4.013267 TGGAATACCGGGTTCGTTTTAA 57.987 40.909 4.31 0.00 39.42 1.52
38 39 3.692257 TGGAATACCGGGTTCGTTTTA 57.308 42.857 4.31 0.00 39.42 1.52
39 40 2.565046 TGGAATACCGGGTTCGTTTT 57.435 45.000 4.31 0.00 39.42 2.43
40 41 2.635714 GATGGAATACCGGGTTCGTTT 58.364 47.619 4.31 0.00 39.42 3.60
41 42 1.472026 CGATGGAATACCGGGTTCGTT 60.472 52.381 4.31 0.00 39.42 3.85
42 43 0.103572 CGATGGAATACCGGGTTCGT 59.896 55.000 4.31 2.37 39.42 3.85
43 44 0.386476 TCGATGGAATACCGGGTTCG 59.614 55.000 4.31 7.73 39.42 3.95
44 45 1.270147 CCTCGATGGAATACCGGGTTC 60.270 57.143 4.31 9.96 39.42 3.62
45 46 0.756903 CCTCGATGGAATACCGGGTT 59.243 55.000 4.31 0.00 39.42 4.11
46 47 0.105862 TCCTCGATGGAATACCGGGT 60.106 55.000 6.32 4.46 42.94 5.28
47 48 2.741433 TCCTCGATGGAATACCGGG 58.259 57.895 6.32 0.00 42.94 5.73
56 57 7.912056 ATTATGAAATGTGTATCCTCGATGG 57.088 36.000 0.00 0.00 37.10 3.51
82 83 8.380099 GGGTTTTAAGGAGAATTGGGTAAATTT 58.620 33.333 0.00 0.00 38.64 1.82
83 84 7.514473 TGGGTTTTAAGGAGAATTGGGTAAATT 59.486 33.333 0.00 0.00 41.33 1.82
84 85 7.020009 TGGGTTTTAAGGAGAATTGGGTAAAT 58.980 34.615 0.00 0.00 0.00 1.40
85 86 6.382925 TGGGTTTTAAGGAGAATTGGGTAAA 58.617 36.000 0.00 0.00 0.00 2.01
86 87 5.966684 TGGGTTTTAAGGAGAATTGGGTAA 58.033 37.500 0.00 0.00 0.00 2.85
87 88 5.075344 ACTGGGTTTTAAGGAGAATTGGGTA 59.925 40.000 0.00 0.00 0.00 3.69
88 89 4.140782 ACTGGGTTTTAAGGAGAATTGGGT 60.141 41.667 0.00 0.00 0.00 4.51
89 90 4.416516 ACTGGGTTTTAAGGAGAATTGGG 58.583 43.478 0.00 0.00 0.00 4.12
90 91 6.889722 TCATACTGGGTTTTAAGGAGAATTGG 59.110 38.462 0.00 0.00 0.00 3.16
91 92 7.415653 GCTCATACTGGGTTTTAAGGAGAATTG 60.416 40.741 0.00 0.00 0.00 2.32
92 93 6.603599 GCTCATACTGGGTTTTAAGGAGAATT 59.396 38.462 0.00 0.00 0.00 2.17
93 94 6.122964 GCTCATACTGGGTTTTAAGGAGAAT 58.877 40.000 0.00 0.00 0.00 2.40
94 95 5.013704 TGCTCATACTGGGTTTTAAGGAGAA 59.986 40.000 0.00 0.00 0.00 2.87
95 96 4.534500 TGCTCATACTGGGTTTTAAGGAGA 59.466 41.667 0.00 0.00 0.00 3.71
96 97 4.843728 TGCTCATACTGGGTTTTAAGGAG 58.156 43.478 0.00 0.00 0.00 3.69
97 98 4.919774 TGCTCATACTGGGTTTTAAGGA 57.080 40.909 0.00 0.00 0.00 3.36
98 99 5.975693 TTTGCTCATACTGGGTTTTAAGG 57.024 39.130 0.00 0.00 0.00 2.69
99 100 7.830739 AGATTTTGCTCATACTGGGTTTTAAG 58.169 34.615 0.00 0.00 0.00 1.85
100 101 7.093945 GGAGATTTTGCTCATACTGGGTTTTAA 60.094 37.037 0.00 0.00 36.62 1.52
101 102 6.377146 GGAGATTTTGCTCATACTGGGTTTTA 59.623 38.462 0.00 0.00 36.62 1.52
102 103 5.185828 GGAGATTTTGCTCATACTGGGTTTT 59.814 40.000 0.00 0.00 36.62 2.43
103 104 4.706962 GGAGATTTTGCTCATACTGGGTTT 59.293 41.667 0.00 0.00 36.62 3.27
104 105 4.018050 AGGAGATTTTGCTCATACTGGGTT 60.018 41.667 0.00 0.00 36.62 4.11
105 106 3.525199 AGGAGATTTTGCTCATACTGGGT 59.475 43.478 0.00 0.00 36.62 4.51
106 107 4.162040 AGGAGATTTTGCTCATACTGGG 57.838 45.455 0.00 0.00 36.62 4.45
107 108 7.050377 TCTTAAGGAGATTTTGCTCATACTGG 58.950 38.462 1.85 0.00 36.62 4.00
108 109 8.498054 TTCTTAAGGAGATTTTGCTCATACTG 57.502 34.615 1.85 0.00 36.62 2.74
109 110 9.520515 TTTTCTTAAGGAGATTTTGCTCATACT 57.479 29.630 1.85 0.00 36.62 2.12
110 111 9.780413 CTTTTCTTAAGGAGATTTTGCTCATAC 57.220 33.333 1.85 0.00 36.62 2.39
111 112 9.739276 TCTTTTCTTAAGGAGATTTTGCTCATA 57.261 29.630 1.85 0.00 36.62 2.15
112 113 8.518702 GTCTTTTCTTAAGGAGATTTTGCTCAT 58.481 33.333 1.85 0.00 36.62 2.90
113 114 7.040409 GGTCTTTTCTTAAGGAGATTTTGCTCA 60.040 37.037 1.85 0.00 36.62 4.26
114 115 7.040409 TGGTCTTTTCTTAAGGAGATTTTGCTC 60.040 37.037 1.85 0.00 33.49 4.26
115 116 6.777580 TGGTCTTTTCTTAAGGAGATTTTGCT 59.222 34.615 1.85 0.00 33.49 3.91
116 117 6.863645 GTGGTCTTTTCTTAAGGAGATTTTGC 59.136 38.462 1.85 0.00 33.49 3.68
117 118 8.171164 AGTGGTCTTTTCTTAAGGAGATTTTG 57.829 34.615 1.85 0.00 33.49 2.44
118 119 7.448777 GGAGTGGTCTTTTCTTAAGGAGATTTT 59.551 37.037 1.85 0.00 33.49 1.82
119 120 6.943146 GGAGTGGTCTTTTCTTAAGGAGATTT 59.057 38.462 1.85 0.00 33.49 2.17
120 121 6.044404 TGGAGTGGTCTTTTCTTAAGGAGATT 59.956 38.462 1.85 0.00 33.49 2.40
121 122 5.548056 TGGAGTGGTCTTTTCTTAAGGAGAT 59.452 40.000 1.85 0.00 33.49 2.75
122 123 4.905456 TGGAGTGGTCTTTTCTTAAGGAGA 59.095 41.667 1.85 1.68 0.00 3.71
123 124 4.998033 GTGGAGTGGTCTTTTCTTAAGGAG 59.002 45.833 1.85 0.00 0.00 3.69
124 125 4.658901 AGTGGAGTGGTCTTTTCTTAAGGA 59.341 41.667 1.85 0.00 0.00 3.36
125 126 4.974399 AGTGGAGTGGTCTTTTCTTAAGG 58.026 43.478 1.85 0.00 0.00 2.69
126 127 4.686554 CGAGTGGAGTGGTCTTTTCTTAAG 59.313 45.833 0.00 0.00 0.00 1.85
127 128 4.342951 TCGAGTGGAGTGGTCTTTTCTTAA 59.657 41.667 0.00 0.00 0.00 1.85
128 129 3.893200 TCGAGTGGAGTGGTCTTTTCTTA 59.107 43.478 0.00 0.00 0.00 2.10
129 130 2.698797 TCGAGTGGAGTGGTCTTTTCTT 59.301 45.455 0.00 0.00 0.00 2.52
130 131 2.317040 TCGAGTGGAGTGGTCTTTTCT 58.683 47.619 0.00 0.00 0.00 2.52
131 132 2.814280 TCGAGTGGAGTGGTCTTTTC 57.186 50.000 0.00 0.00 0.00 2.29
132 133 2.632996 TGATCGAGTGGAGTGGTCTTTT 59.367 45.455 0.00 0.00 0.00 2.27
133 134 2.248248 TGATCGAGTGGAGTGGTCTTT 58.752 47.619 0.00 0.00 0.00 2.52
134 135 1.924731 TGATCGAGTGGAGTGGTCTT 58.075 50.000 0.00 0.00 0.00 3.01
135 136 2.151502 ATGATCGAGTGGAGTGGTCT 57.848 50.000 0.00 0.00 0.00 3.85
136 137 2.287069 CGTATGATCGAGTGGAGTGGTC 60.287 54.545 0.00 0.00 0.00 4.02
137 138 1.676529 CGTATGATCGAGTGGAGTGGT 59.323 52.381 0.00 0.00 0.00 4.16
138 139 1.676529 ACGTATGATCGAGTGGAGTGG 59.323 52.381 0.00 0.00 34.70 4.00
139 140 2.614520 AGACGTATGATCGAGTGGAGTG 59.385 50.000 0.00 0.00 34.70 3.51
140 141 2.920524 AGACGTATGATCGAGTGGAGT 58.079 47.619 0.00 0.00 34.70 3.85
141 142 3.972950 AAGACGTATGATCGAGTGGAG 57.027 47.619 0.00 0.00 34.70 3.86
142 143 4.320275 GCATAAGACGTATGATCGAGTGGA 60.320 45.833 11.96 0.00 42.07 4.02
143 144 3.914966 GCATAAGACGTATGATCGAGTGG 59.085 47.826 11.96 0.00 42.07 4.00
144 145 4.537015 TGCATAAGACGTATGATCGAGTG 58.463 43.478 11.96 0.00 42.07 3.51
145 146 4.830826 TGCATAAGACGTATGATCGAGT 57.169 40.909 11.96 0.00 42.07 4.18
146 147 6.634837 GGATATGCATAAGACGTATGATCGAG 59.365 42.308 11.13 0.00 42.07 4.04
147 148 6.094881 TGGATATGCATAAGACGTATGATCGA 59.905 38.462 11.13 0.00 42.07 3.59
148 149 6.265577 TGGATATGCATAAGACGTATGATCG 58.734 40.000 11.13 0.00 42.07 3.69
149 150 8.654230 ATTGGATATGCATAAGACGTATGATC 57.346 34.615 11.13 0.34 42.07 2.92
150 151 9.453572 AAATTGGATATGCATAAGACGTATGAT 57.546 29.630 11.13 5.83 42.07 2.45
151 152 8.846943 AAATTGGATATGCATAAGACGTATGA 57.153 30.769 11.13 0.00 42.07 2.15
155 156 8.514594 CCATTAAATTGGATATGCATAAGACGT 58.485 33.333 11.13 0.00 39.25 4.34
156 157 7.485913 GCCATTAAATTGGATATGCATAAGACG 59.514 37.037 11.13 0.00 39.25 4.18
157 158 8.306038 TGCCATTAAATTGGATATGCATAAGAC 58.694 33.333 11.13 4.71 39.25 3.01
158 159 8.306038 GTGCCATTAAATTGGATATGCATAAGA 58.694 33.333 11.13 0.00 39.25 2.10
159 160 8.089597 TGTGCCATTAAATTGGATATGCATAAG 58.910 33.333 11.13 0.00 39.25 1.73
160 161 7.871973 GTGTGCCATTAAATTGGATATGCATAA 59.128 33.333 11.13 0.00 39.25 1.90
161 162 7.015001 TGTGTGCCATTAAATTGGATATGCATA 59.985 33.333 9.27 9.27 39.25 3.14
162 163 6.183360 TGTGTGCCATTAAATTGGATATGCAT 60.183 34.615 3.79 3.79 39.25 3.96
163 164 5.128335 TGTGTGCCATTAAATTGGATATGCA 59.872 36.000 0.00 0.00 39.25 3.96
164 165 5.599732 TGTGTGCCATTAAATTGGATATGC 58.400 37.500 0.00 0.00 39.25 3.14
165 166 6.201425 GCTTGTGTGCCATTAAATTGGATATG 59.799 38.462 0.00 0.00 39.25 1.78
166 167 6.282930 GCTTGTGTGCCATTAAATTGGATAT 58.717 36.000 0.00 0.00 39.25 1.63
167 168 5.659463 GCTTGTGTGCCATTAAATTGGATA 58.341 37.500 0.00 0.00 39.25 2.59
168 169 4.506758 GCTTGTGTGCCATTAAATTGGAT 58.493 39.130 0.00 0.00 39.25 3.41
169 170 3.924144 GCTTGTGTGCCATTAAATTGGA 58.076 40.909 0.00 0.00 39.25 3.53
181 182 0.881796 GGTAAAGAGGGCTTGTGTGC 59.118 55.000 0.00 0.00 33.79 4.57
182 183 1.073923 AGGGTAAAGAGGGCTTGTGTG 59.926 52.381 0.00 0.00 33.79 3.82
183 184 1.446016 AGGGTAAAGAGGGCTTGTGT 58.554 50.000 0.00 0.00 33.79 3.72
184 185 2.586648 AAGGGTAAAGAGGGCTTGTG 57.413 50.000 0.00 0.00 33.79 3.33
185 186 3.612795 AAAAGGGTAAAGAGGGCTTGT 57.387 42.857 0.00 0.00 33.79 3.16
215 216 3.007831 TGTGGCATATGAGTGTCTTCACA 59.992 43.478 6.97 4.59 46.01 3.58
216 217 3.599343 TGTGGCATATGAGTGTCTTCAC 58.401 45.455 6.97 2.25 44.15 3.18
217 218 3.979101 TGTGGCATATGAGTGTCTTCA 57.021 42.857 6.97 0.00 0.00 3.02
218 219 5.627499 TTTTGTGGCATATGAGTGTCTTC 57.373 39.130 6.97 0.00 0.00 2.87
219 220 6.594788 ATTTTTGTGGCATATGAGTGTCTT 57.405 33.333 6.97 0.00 0.00 3.01
220 221 7.886629 ATATTTTTGTGGCATATGAGTGTCT 57.113 32.000 6.97 0.00 0.00 3.41
243 244 9.113838 GTGTCTGGACAAATGATTACAGATAAT 57.886 33.333 4.92 0.00 43.77 1.28
244 245 8.100164 TGTGTCTGGACAAATGATTACAGATAA 58.900 33.333 4.92 0.00 43.77 1.75
245 246 7.619965 TGTGTCTGGACAAATGATTACAGATA 58.380 34.615 4.92 0.00 43.77 1.98
246 247 6.475504 TGTGTCTGGACAAATGATTACAGAT 58.524 36.000 4.92 0.00 43.77 2.90
247 248 5.863965 TGTGTCTGGACAAATGATTACAGA 58.136 37.500 4.92 0.00 43.77 3.41
248 249 6.558771 TTGTGTCTGGACAAATGATTACAG 57.441 37.500 4.92 0.00 43.77 2.74
249 250 6.734137 GTTTGTGTCTGGACAAATGATTACA 58.266 36.000 4.92 0.00 45.21 2.41
256 257 2.020720 TGCGTTTGTGTCTGGACAAAT 58.979 42.857 4.92 0.00 45.21 2.32
257 258 1.131504 GTGCGTTTGTGTCTGGACAAA 59.868 47.619 4.92 0.00 43.77 2.83
258 259 0.730265 GTGCGTTTGTGTCTGGACAA 59.270 50.000 4.92 0.00 43.77 3.18
259 260 0.107897 AGTGCGTTTGTGTCTGGACA 60.108 50.000 0.00 0.00 39.32 4.02
260 261 0.582005 GAGTGCGTTTGTGTCTGGAC 59.418 55.000 0.00 0.00 0.00 4.02
261 262 0.464036 AGAGTGCGTTTGTGTCTGGA 59.536 50.000 0.00 0.00 0.00 3.86
262 263 0.583438 CAGAGTGCGTTTGTGTCTGG 59.417 55.000 0.00 0.00 32.59 3.86
263 264 1.524355 CTCAGAGTGCGTTTGTGTCTG 59.476 52.381 0.00 0.00 36.73 3.51
264 265 1.137086 ACTCAGAGTGCGTTTGTGTCT 59.863 47.619 0.91 0.00 0.00 3.41
265 266 1.523095 GACTCAGAGTGCGTTTGTGTC 59.477 52.381 8.15 0.00 0.00 3.67
266 267 1.137086 AGACTCAGAGTGCGTTTGTGT 59.863 47.619 8.15 0.00 0.00 3.72
267 268 1.858091 AGACTCAGAGTGCGTTTGTG 58.142 50.000 8.15 0.00 0.00 3.33
268 269 2.604046 AAGACTCAGAGTGCGTTTGT 57.396 45.000 8.15 0.00 0.00 2.83
269 270 5.597813 AAATAAGACTCAGAGTGCGTTTG 57.402 39.130 8.15 0.00 0.00 2.93
270 271 7.097192 TCATAAATAAGACTCAGAGTGCGTTT 58.903 34.615 8.15 6.45 0.00 3.60
271 272 6.631016 TCATAAATAAGACTCAGAGTGCGTT 58.369 36.000 8.15 1.30 0.00 4.84
272 273 6.208988 TCATAAATAAGACTCAGAGTGCGT 57.791 37.500 8.15 1.06 0.00 5.24
273 274 8.978564 ATATCATAAATAAGACTCAGAGTGCG 57.021 34.615 8.15 0.00 0.00 5.34
293 294 9.784531 GGTTGAAGATAATCCTTTCAGATATCA 57.215 33.333 5.32 0.00 0.00 2.15
294 295 9.784531 TGGTTGAAGATAATCCTTTCAGATATC 57.215 33.333 0.00 0.00 0.00 1.63
295 296 9.790344 CTGGTTGAAGATAATCCTTTCAGATAT 57.210 33.333 0.00 0.00 0.00 1.63
296 297 8.213679 CCTGGTTGAAGATAATCCTTTCAGATA 58.786 37.037 0.00 0.00 0.00 1.98
297 298 7.059156 CCTGGTTGAAGATAATCCTTTCAGAT 58.941 38.462 0.00 0.00 0.00 2.90
298 299 6.418101 CCTGGTTGAAGATAATCCTTTCAGA 58.582 40.000 0.00 0.00 0.00 3.27
299 300 5.067023 GCCTGGTTGAAGATAATCCTTTCAG 59.933 44.000 0.00 0.00 0.00 3.02
300 301 4.949856 GCCTGGTTGAAGATAATCCTTTCA 59.050 41.667 0.00 0.00 0.00 2.69
301 302 4.339530 GGCCTGGTTGAAGATAATCCTTTC 59.660 45.833 0.00 0.00 0.00 2.62
302 303 4.281657 GGCCTGGTTGAAGATAATCCTTT 58.718 43.478 0.00 0.00 0.00 3.11
303 304 3.685550 CGGCCTGGTTGAAGATAATCCTT 60.686 47.826 0.00 0.00 0.00 3.36
304 305 2.158755 CGGCCTGGTTGAAGATAATCCT 60.159 50.000 0.00 0.00 0.00 3.24
305 306 2.222027 CGGCCTGGTTGAAGATAATCC 58.778 52.381 0.00 0.00 0.00 3.01
306 307 1.604278 GCGGCCTGGTTGAAGATAATC 59.396 52.381 0.00 0.00 0.00 1.75
307 308 1.064758 TGCGGCCTGGTTGAAGATAAT 60.065 47.619 0.00 0.00 0.00 1.28
308 309 0.326595 TGCGGCCTGGTTGAAGATAA 59.673 50.000 0.00 0.00 0.00 1.75
309 310 0.326595 TTGCGGCCTGGTTGAAGATA 59.673 50.000 0.00 0.00 0.00 1.98
310 311 0.323725 ATTGCGGCCTGGTTGAAGAT 60.324 50.000 0.00 0.00 0.00 2.40
311 312 0.960364 GATTGCGGCCTGGTTGAAGA 60.960 55.000 0.00 0.00 0.00 2.87
312 313 1.243342 TGATTGCGGCCTGGTTGAAG 61.243 55.000 0.00 0.00 0.00 3.02
313 314 0.611618 ATGATTGCGGCCTGGTTGAA 60.612 50.000 0.00 0.00 0.00 2.69
314 315 0.611618 AATGATTGCGGCCTGGTTGA 60.612 50.000 0.00 0.00 0.00 3.18
315 316 0.247185 AAATGATTGCGGCCTGGTTG 59.753 50.000 0.00 0.00 0.00 3.77
316 317 0.975887 AAAATGATTGCGGCCTGGTT 59.024 45.000 0.00 0.00 0.00 3.67
317 318 0.975887 AAAAATGATTGCGGCCTGGT 59.024 45.000 0.00 0.00 0.00 4.00
318 319 1.067000 TCAAAAATGATTGCGGCCTGG 60.067 47.619 0.00 0.00 0.00 4.45
319 320 2.094597 TCTCAAAAATGATTGCGGCCTG 60.095 45.455 0.00 0.00 0.00 4.85
320 321 2.170166 TCTCAAAAATGATTGCGGCCT 58.830 42.857 0.00 0.00 0.00 5.19
321 322 2.652941 TCTCAAAAATGATTGCGGCC 57.347 45.000 0.00 0.00 0.00 6.13
322 323 5.343249 ACTAATCTCAAAAATGATTGCGGC 58.657 37.500 0.00 0.00 35.01 6.53
323 324 7.329226 ACAAACTAATCTCAAAAATGATTGCGG 59.671 33.333 0.00 0.00 35.01 5.69
324 325 8.231304 ACAAACTAATCTCAAAAATGATTGCG 57.769 30.769 0.00 0.00 35.01 4.85
328 329 9.825972 CGTGTACAAACTAATCTCAAAAATGAT 57.174 29.630 0.00 0.00 0.00 2.45
329 330 9.047371 TCGTGTACAAACTAATCTCAAAAATGA 57.953 29.630 0.00 0.00 0.00 2.57
330 331 9.103048 GTCGTGTACAAACTAATCTCAAAAATG 57.897 33.333 0.00 0.00 0.00 2.32
331 332 8.832521 TGTCGTGTACAAACTAATCTCAAAAAT 58.167 29.630 0.00 0.00 34.29 1.82
332 333 8.199176 TGTCGTGTACAAACTAATCTCAAAAA 57.801 30.769 0.00 0.00 34.29 1.94
333 334 7.773864 TGTCGTGTACAAACTAATCTCAAAA 57.226 32.000 0.00 0.00 34.29 2.44
334 335 7.956420 ATGTCGTGTACAAACTAATCTCAAA 57.044 32.000 0.00 0.00 42.70 2.69
335 336 7.956420 AATGTCGTGTACAAACTAATCTCAA 57.044 32.000 0.00 0.00 42.70 3.02
343 344 8.997621 AATCTGTATAATGTCGTGTACAAACT 57.002 30.769 0.00 0.00 42.70 2.66
350 351 8.958119 ACCAATTAATCTGTATAATGTCGTGT 57.042 30.769 0.00 0.00 0.00 4.49
351 352 9.261180 AGACCAATTAATCTGTATAATGTCGTG 57.739 33.333 0.00 0.00 0.00 4.35
366 367 9.990868 AGGGTAACTCAATTTAGACCAATTAAT 57.009 29.630 0.00 0.00 0.00 1.40
367 368 9.816787 AAGGGTAACTCAATTTAGACCAATTAA 57.183 29.630 0.00 0.00 0.00 1.40
368 369 9.816787 AAAGGGTAACTCAATTTAGACCAATTA 57.183 29.630 0.00 0.00 0.00 1.40
369 370 8.721133 AAAGGGTAACTCAATTTAGACCAATT 57.279 30.769 0.00 0.00 0.00 2.32
370 371 7.396339 GGAAAGGGTAACTCAATTTAGACCAAT 59.604 37.037 0.00 0.00 0.00 3.16
371 372 6.717997 GGAAAGGGTAACTCAATTTAGACCAA 59.282 38.462 0.00 0.00 0.00 3.67
372 373 6.243148 GGAAAGGGTAACTCAATTTAGACCA 58.757 40.000 0.00 0.00 0.00 4.02
373 374 5.353400 CGGAAAGGGTAACTCAATTTAGACC 59.647 44.000 0.00 0.00 0.00 3.85
374 375 5.353400 CCGGAAAGGGTAACTCAATTTAGAC 59.647 44.000 0.00 0.00 35.97 2.59
375 376 5.248934 TCCGGAAAGGGTAACTCAATTTAGA 59.751 40.000 0.00 0.00 41.52 2.10
376 377 5.493809 TCCGGAAAGGGTAACTCAATTTAG 58.506 41.667 0.00 0.00 41.52 1.85
377 378 5.013391 ACTCCGGAAAGGGTAACTCAATTTA 59.987 40.000 5.23 0.00 41.52 1.40
378 379 4.202535 ACTCCGGAAAGGGTAACTCAATTT 60.203 41.667 5.23 0.00 41.52 1.82
379 380 3.329814 ACTCCGGAAAGGGTAACTCAATT 59.670 43.478 5.23 0.00 41.52 2.32
380 381 2.910977 ACTCCGGAAAGGGTAACTCAAT 59.089 45.455 5.23 0.00 41.52 2.57
381 382 2.332117 ACTCCGGAAAGGGTAACTCAA 58.668 47.619 5.23 0.00 41.52 3.02
382 383 2.019807 ACTCCGGAAAGGGTAACTCA 57.980 50.000 5.23 0.00 41.52 3.41
383 384 4.161001 TCAATACTCCGGAAAGGGTAACTC 59.839 45.833 5.23 0.00 41.52 3.01
384 385 4.081254 GTCAATACTCCGGAAAGGGTAACT 60.081 45.833 5.23 0.00 41.52 2.24
385 386 4.186926 GTCAATACTCCGGAAAGGGTAAC 58.813 47.826 5.23 0.00 41.52 2.50
386 387 3.198417 GGTCAATACTCCGGAAAGGGTAA 59.802 47.826 5.23 0.00 41.52 2.85
387 388 2.767960 GGTCAATACTCCGGAAAGGGTA 59.232 50.000 5.23 4.48 41.52 3.69
388 389 1.558294 GGTCAATACTCCGGAAAGGGT 59.442 52.381 5.23 1.81 41.52 4.34
389 390 1.838077 AGGTCAATACTCCGGAAAGGG 59.162 52.381 5.23 0.00 41.52 3.95
390 391 3.629142 AAGGTCAATACTCCGGAAAGG 57.371 47.619 5.23 0.00 42.97 3.11
391 392 4.324267 ACAAAGGTCAATACTCCGGAAAG 58.676 43.478 5.23 0.00 0.00 2.62
392 393 4.360951 ACAAAGGTCAATACTCCGGAAA 57.639 40.909 5.23 0.00 0.00 3.13
393 394 4.360951 AACAAAGGTCAATACTCCGGAA 57.639 40.909 5.23 0.00 0.00 4.30
394 395 4.360951 AAACAAAGGTCAATACTCCGGA 57.639 40.909 2.93 2.93 0.00 5.14
395 396 5.470777 TGTTAAACAAAGGTCAATACTCCGG 59.529 40.000 0.00 0.00 0.00 5.14
396 397 6.204108 ACTGTTAAACAAAGGTCAATACTCCG 59.796 38.462 0.00 0.00 0.00 4.63
397 398 7.506328 ACTGTTAAACAAAGGTCAATACTCC 57.494 36.000 0.00 0.00 0.00 3.85
398 399 7.042254 ACGACTGTTAAACAAAGGTCAATACTC 60.042 37.037 0.00 0.00 0.00 2.59
399 400 6.764560 ACGACTGTTAAACAAAGGTCAATACT 59.235 34.615 0.00 0.00 0.00 2.12
400 401 6.951643 ACGACTGTTAAACAAAGGTCAATAC 58.048 36.000 0.00 0.00 0.00 1.89
401 402 7.411274 CAACGACTGTTAAACAAAGGTCAATA 58.589 34.615 0.00 0.00 36.28 1.90
402 403 6.262601 CAACGACTGTTAAACAAAGGTCAAT 58.737 36.000 0.00 0.00 36.28 2.57
403 404 5.632959 CAACGACTGTTAAACAAAGGTCAA 58.367 37.500 0.00 0.00 36.28 3.18
404 405 4.437659 GCAACGACTGTTAAACAAAGGTCA 60.438 41.667 0.00 0.00 36.28 4.02
405 406 4.033019 GCAACGACTGTTAAACAAAGGTC 58.967 43.478 0.00 0.00 36.28 3.85
406 407 3.440872 TGCAACGACTGTTAAACAAAGGT 59.559 39.130 0.00 0.00 36.28 3.50
407 408 3.789224 GTGCAACGACTGTTAAACAAAGG 59.211 43.478 0.00 0.00 36.28 3.11
408 409 4.407818 TGTGCAACGACTGTTAAACAAAG 58.592 39.130 0.00 0.00 42.39 2.77
409 410 4.154375 TCTGTGCAACGACTGTTAAACAAA 59.846 37.500 0.00 0.00 42.39 2.83
410 411 3.685272 TCTGTGCAACGACTGTTAAACAA 59.315 39.130 0.00 0.00 42.39 2.83
411 412 3.263261 TCTGTGCAACGACTGTTAAACA 58.737 40.909 0.00 0.00 42.39 2.83
412 413 3.936902 TCTGTGCAACGACTGTTAAAC 57.063 42.857 0.00 0.00 42.39 2.01
413 414 6.649141 AGATAATCTGTGCAACGACTGTTAAA 59.351 34.615 0.00 0.00 42.39 1.52
414 415 6.163476 AGATAATCTGTGCAACGACTGTTAA 58.837 36.000 0.00 0.00 42.39 2.01
415 416 5.720202 AGATAATCTGTGCAACGACTGTTA 58.280 37.500 0.00 0.00 42.39 2.41
416 417 4.569943 AGATAATCTGTGCAACGACTGTT 58.430 39.130 0.00 0.00 42.39 3.16
417 418 4.193826 AGATAATCTGTGCAACGACTGT 57.806 40.909 0.00 0.00 42.39 3.55
418 419 4.627035 TGAAGATAATCTGTGCAACGACTG 59.373 41.667 0.00 0.00 42.39 3.51
419 420 4.627467 GTGAAGATAATCTGTGCAACGACT 59.373 41.667 0.00 0.00 42.39 4.18
420 421 4.201724 GGTGAAGATAATCTGTGCAACGAC 60.202 45.833 0.00 0.00 42.39 4.34
421 422 3.932710 GGTGAAGATAATCTGTGCAACGA 59.067 43.478 0.00 0.00 42.39 3.85
422 423 3.935203 AGGTGAAGATAATCTGTGCAACG 59.065 43.478 0.00 0.00 42.39 4.10
423 424 5.886960 AAGGTGAAGATAATCTGTGCAAC 57.113 39.130 0.00 0.00 37.35 4.17
424 425 6.240894 AGAAAGGTGAAGATAATCTGTGCAA 58.759 36.000 0.00 0.00 0.00 4.08
425 426 5.809001 AGAAAGGTGAAGATAATCTGTGCA 58.191 37.500 0.00 0.00 0.00 4.57
426 427 5.006165 CGAGAAAGGTGAAGATAATCTGTGC 59.994 44.000 0.00 0.00 0.00 4.57
427 428 6.102663 ACGAGAAAGGTGAAGATAATCTGTG 58.897 40.000 0.00 0.00 0.00 3.66
428 429 6.153680 AGACGAGAAAGGTGAAGATAATCTGT 59.846 38.462 0.00 0.00 0.00 3.41
429 430 6.568869 AGACGAGAAAGGTGAAGATAATCTG 58.431 40.000 0.00 0.00 0.00 2.90
430 431 6.783708 AGACGAGAAAGGTGAAGATAATCT 57.216 37.500 0.00 0.00 0.00 2.40
431 432 7.332182 ACAAAGACGAGAAAGGTGAAGATAATC 59.668 37.037 0.00 0.00 0.00 1.75
432 433 7.162082 ACAAAGACGAGAAAGGTGAAGATAAT 58.838 34.615 0.00 0.00 0.00 1.28
433 434 6.522054 ACAAAGACGAGAAAGGTGAAGATAA 58.478 36.000 0.00 0.00 0.00 1.75
434 435 6.097915 ACAAAGACGAGAAAGGTGAAGATA 57.902 37.500 0.00 0.00 0.00 1.98
435 436 4.962155 ACAAAGACGAGAAAGGTGAAGAT 58.038 39.130 0.00 0.00 0.00 2.40
436 437 4.402056 ACAAAGACGAGAAAGGTGAAGA 57.598 40.909 0.00 0.00 0.00 2.87
437 438 5.485662 AAACAAAGACGAGAAAGGTGAAG 57.514 39.130 0.00 0.00 0.00 3.02
552 553 2.261361 CTGATGCCGTCACGTGGA 59.739 61.111 17.00 0.00 32.22 4.02
648 649 0.249955 AAGAGCAGAGAGGCAGAAGC 59.750 55.000 0.00 0.00 41.10 3.86
650 651 0.901124 GGAAGAGCAGAGAGGCAGAA 59.099 55.000 0.00 0.00 35.83 3.02
687 688 4.087892 GCGGGGCAGAGCAGAAGA 62.088 66.667 0.00 0.00 0.00 2.87
848 849 1.138266 TCTCCGCTAAAGGGCACATAC 59.862 52.381 0.00 0.00 0.00 2.39
850 851 0.839946 ATCTCCGCTAAAGGGCACAT 59.160 50.000 0.00 0.00 0.00 3.21
1170 1194 0.733729 GAGCACCGTAGACGACAGAT 59.266 55.000 3.07 0.00 43.02 2.90
1494 1518 0.240945 CACAATTGAACACCGAGCCC 59.759 55.000 13.59 0.00 0.00 5.19
1522 1546 2.967076 CACTGTCCTGTTGCGCGT 60.967 61.111 8.43 0.00 0.00 6.01
1527 1551 1.600957 CAGCAGAACACTGTCCTGTTG 59.399 52.381 0.00 0.00 34.40 3.33
1577 1601 1.965754 GACATTCCTCGGAGCCAGCT 61.966 60.000 0.00 0.00 0.00 4.24
1584 1608 3.071023 ACTGAAACTTGACATTCCTCGGA 59.929 43.478 0.00 0.00 0.00 4.55
1938 1962 2.362565 GGCCCACTATTGCCCCAA 59.637 61.111 0.00 0.00 41.97 4.12
1980 2004 2.844348 AGAAGATACACAAATCCCGGGT 59.156 45.455 22.86 4.84 0.00 5.28
2364 2388 3.668447 TGTCATCCTCAACTTGCTCTTC 58.332 45.455 0.00 0.00 0.00 2.87
2526 2550 1.050204 ATGAAAAGCTGCCTTTGCCA 58.950 45.000 0.13 0.00 40.30 4.92
3090 3114 6.213600 TGCCACTTAGGATTTCTAGAAGAACT 59.786 38.462 5.12 7.54 41.22 3.01
3213 3237 3.230134 CAGGTCAGAGGGAGGAGATAAG 58.770 54.545 0.00 0.00 0.00 1.73
3216 3240 0.264359 CCAGGTCAGAGGGAGGAGAT 59.736 60.000 0.00 0.00 0.00 2.75
3273 3297 0.095935 CTTTGCCTCGCATTCTCACG 59.904 55.000 0.00 0.00 38.76 4.35
3405 3429 0.388907 CCTTTTTGTGCATCCGGCTG 60.389 55.000 0.00 0.00 45.15 4.85
3462 3486 1.519455 GTCCCCATCAACGAGCTCG 60.519 63.158 33.45 33.45 46.33 5.03
3886 3912 4.073293 AGAAGTGCCAATTATAGGACGG 57.927 45.455 0.00 0.00 0.00 4.79
3920 3946 1.398390 GGATTCATCAAGTGTCGCCAC 59.602 52.381 0.00 0.00 42.17 5.01
3925 3952 4.999950 ACAGAACAGGATTCATCAAGTGTC 59.000 41.667 0.00 0.00 0.00 3.67
3978 4005 4.495844 CGAAACCAACACCAGAAAGAGAAC 60.496 45.833 0.00 0.00 0.00 3.01
3979 4006 3.625764 CGAAACCAACACCAGAAAGAGAA 59.374 43.478 0.00 0.00 0.00 2.87
3980 4007 3.202906 CGAAACCAACACCAGAAAGAGA 58.797 45.455 0.00 0.00 0.00 3.10
4189 4218 4.002906 AGATTAGCAGACAAACCGTGAA 57.997 40.909 0.00 0.00 0.00 3.18
4213 4242 5.883115 TGAAAATTACACTTCACCTGTCACA 59.117 36.000 0.00 0.00 0.00 3.58
4250 4279 1.486726 ACCGACAATCTCCTGAATCCC 59.513 52.381 0.00 0.00 0.00 3.85
4297 4326 0.581529 TTGTCTCGAAAGCAACAGCG 59.418 50.000 0.00 0.00 0.00 5.18
4511 4542 7.264947 ACAAAGACTAAACCAAACCAAGAATG 58.735 34.615 0.00 0.00 0.00 2.67
4512 4543 7.418337 ACAAAGACTAAACCAAACCAAGAAT 57.582 32.000 0.00 0.00 0.00 2.40
4513 4544 6.844097 ACAAAGACTAAACCAAACCAAGAA 57.156 33.333 0.00 0.00 0.00 2.52
4514 4545 6.434652 TCAACAAAGACTAAACCAAACCAAGA 59.565 34.615 0.00 0.00 0.00 3.02
4515 4546 6.626302 TCAACAAAGACTAAACCAAACCAAG 58.374 36.000 0.00 0.00 0.00 3.61
4516 4547 6.591750 TCAACAAAGACTAAACCAAACCAA 57.408 33.333 0.00 0.00 0.00 3.67
4517 4548 6.783708 ATCAACAAAGACTAAACCAAACCA 57.216 33.333 0.00 0.00 0.00 3.67
4518 4549 8.487313 AAAATCAACAAAGACTAAACCAAACC 57.513 30.769 0.00 0.00 0.00 3.27
4519 4550 9.753669 CAAAAATCAACAAAGACTAAACCAAAC 57.246 29.630 0.00 0.00 0.00 2.93
4520 4551 9.495572 ACAAAAATCAACAAAGACTAAACCAAA 57.504 25.926 0.00 0.00 0.00 3.28
4521 4552 9.145865 GACAAAAATCAACAAAGACTAAACCAA 57.854 29.630 0.00 0.00 0.00 3.67
4522 4553 8.527810 AGACAAAAATCAACAAAGACTAAACCA 58.472 29.630 0.00 0.00 0.00 3.67
4523 4554 8.926715 AGACAAAAATCAACAAAGACTAAACC 57.073 30.769 0.00 0.00 0.00 3.27
4527 4558 9.403583 ACCTAAGACAAAAATCAACAAAGACTA 57.596 29.630 0.00 0.00 0.00 2.59
4528 4559 8.293699 ACCTAAGACAAAAATCAACAAAGACT 57.706 30.769 0.00 0.00 0.00 3.24
4529 4560 9.447040 GTACCTAAGACAAAAATCAACAAAGAC 57.553 33.333 0.00 0.00 0.00 3.01
4530 4561 9.403583 AGTACCTAAGACAAAAATCAACAAAGA 57.596 29.630 0.00 0.00 0.00 2.52
4540 4571 9.979578 TCAACGTATAAGTACCTAAGACAAAAA 57.020 29.630 0.00 0.00 0.00 1.94
4542 4573 9.577110 CATCAACGTATAAGTACCTAAGACAAA 57.423 33.333 0.00 0.00 0.00 2.83
4543 4574 8.192774 CCATCAACGTATAAGTACCTAAGACAA 58.807 37.037 0.00 0.00 0.00 3.18
4544 4575 7.201848 CCCATCAACGTATAAGTACCTAAGACA 60.202 40.741 0.00 0.00 0.00 3.41
4545 4576 7.144000 CCCATCAACGTATAAGTACCTAAGAC 58.856 42.308 0.00 0.00 0.00 3.01
4546 4577 6.239120 GCCCATCAACGTATAAGTACCTAAGA 60.239 42.308 0.00 0.00 0.00 2.10
4547 4578 5.924825 GCCCATCAACGTATAAGTACCTAAG 59.075 44.000 0.00 0.00 0.00 2.18
4548 4579 5.599656 AGCCCATCAACGTATAAGTACCTAA 59.400 40.000 0.00 0.00 0.00 2.69
4549 4580 5.142639 AGCCCATCAACGTATAAGTACCTA 58.857 41.667 0.00 0.00 0.00 3.08
4550 4581 3.965347 AGCCCATCAACGTATAAGTACCT 59.035 43.478 0.00 0.00 0.00 3.08
4551 4582 4.332428 AGCCCATCAACGTATAAGTACC 57.668 45.455 0.00 0.00 0.00 3.34
4552 4583 5.598769 AGAAGCCCATCAACGTATAAGTAC 58.401 41.667 0.00 0.00 0.00 2.73
4553 4584 5.864418 AGAAGCCCATCAACGTATAAGTA 57.136 39.130 0.00 0.00 0.00 2.24
4554 4585 4.755266 AGAAGCCCATCAACGTATAAGT 57.245 40.909 0.00 0.00 0.00 2.24
4555 4586 5.639506 CCATAGAAGCCCATCAACGTATAAG 59.360 44.000 0.00 0.00 0.00 1.73
4556 4587 5.512404 CCCATAGAAGCCCATCAACGTATAA 60.512 44.000 0.00 0.00 0.00 0.98
4557 4588 4.020573 CCCATAGAAGCCCATCAACGTATA 60.021 45.833 0.00 0.00 0.00 1.47
4558 4589 3.244561 CCCATAGAAGCCCATCAACGTAT 60.245 47.826 0.00 0.00 0.00 3.06
4559 4590 2.104111 CCCATAGAAGCCCATCAACGTA 59.896 50.000 0.00 0.00 0.00 3.57
4560 4591 1.134098 CCCATAGAAGCCCATCAACGT 60.134 52.381 0.00 0.00 0.00 3.99
4561 4592 1.597742 CCCATAGAAGCCCATCAACG 58.402 55.000 0.00 0.00 0.00 4.10
4562 4593 1.133668 AGCCCATAGAAGCCCATCAAC 60.134 52.381 0.00 0.00 0.00 3.18
4563 4594 1.225373 AGCCCATAGAAGCCCATCAA 58.775 50.000 0.00 0.00 0.00 2.57
4564 4595 2.116869 TAGCCCATAGAAGCCCATCA 57.883 50.000 0.00 0.00 0.00 3.07
4565 4596 3.728385 ATTAGCCCATAGAAGCCCATC 57.272 47.619 0.00 0.00 0.00 3.51
4566 4597 5.599048 TTAATTAGCCCATAGAAGCCCAT 57.401 39.130 0.00 0.00 0.00 4.00
4567 4598 5.396057 TTTAATTAGCCCATAGAAGCCCA 57.604 39.130 0.00 0.00 0.00 5.36
4568 4599 6.010219 TCATTTAATTAGCCCATAGAAGCCC 58.990 40.000 0.00 0.00 0.00 5.19
4569 4600 6.151817 CCTCATTTAATTAGCCCATAGAAGCC 59.848 42.308 0.00 0.00 0.00 4.35
4570 4601 6.942576 TCCTCATTTAATTAGCCCATAGAAGC 59.057 38.462 0.00 0.00 0.00 3.86
4571 4602 8.924511 TTCCTCATTTAATTAGCCCATAGAAG 57.075 34.615 0.00 0.00 0.00 2.85
4572 4603 9.881773 AATTCCTCATTTAATTAGCCCATAGAA 57.118 29.630 0.00 0.00 0.00 2.10
4573 4604 9.881773 AAATTCCTCATTTAATTAGCCCATAGA 57.118 29.630 0.00 0.00 32.90 1.98
4574 4605 9.918630 CAAATTCCTCATTTAATTAGCCCATAG 57.081 33.333 0.00 0.00 32.90 2.23
4575 4606 9.653516 TCAAATTCCTCATTTAATTAGCCCATA 57.346 29.630 0.00 0.00 32.90 2.74
4576 4607 8.551682 TCAAATTCCTCATTTAATTAGCCCAT 57.448 30.769 0.00 0.00 32.90 4.00
4577 4608 7.069826 CCTCAAATTCCTCATTTAATTAGCCCA 59.930 37.037 0.00 0.00 32.90 5.36
4578 4609 7.069950 ACCTCAAATTCCTCATTTAATTAGCCC 59.930 37.037 0.00 0.00 32.90 5.19
4579 4610 8.011844 ACCTCAAATTCCTCATTTAATTAGCC 57.988 34.615 0.00 0.00 32.90 3.93
4586 4617 9.374711 ACCTTTTTACCTCAAATTCCTCATTTA 57.625 29.630 0.00 0.00 32.90 1.40
4587 4618 8.262601 ACCTTTTTACCTCAAATTCCTCATTT 57.737 30.769 0.00 0.00 35.24 2.32
4588 4619 7.855784 ACCTTTTTACCTCAAATTCCTCATT 57.144 32.000 0.00 0.00 0.00 2.57
4589 4620 7.615757 CCTACCTTTTTACCTCAAATTCCTCAT 59.384 37.037 0.00 0.00 0.00 2.90
4590 4621 6.946009 CCTACCTTTTTACCTCAAATTCCTCA 59.054 38.462 0.00 0.00 0.00 3.86
4591 4622 7.173032 TCCTACCTTTTTACCTCAAATTCCTC 58.827 38.462 0.00 0.00 0.00 3.71
4592 4623 7.098845 TCCTACCTTTTTACCTCAAATTCCT 57.901 36.000 0.00 0.00 0.00 3.36
4593 4624 7.956328 ATCCTACCTTTTTACCTCAAATTCC 57.044 36.000 0.00 0.00 0.00 3.01
4618 4649 9.929180 GAAGCCTACAAATCCTTCTTTTTAATT 57.071 29.630 0.00 0.00 32.90 1.40
4619 4650 9.088987 TGAAGCCTACAAATCCTTCTTTTTAAT 57.911 29.630 0.00 0.00 35.80 1.40
4620 4651 8.472007 TGAAGCCTACAAATCCTTCTTTTTAA 57.528 30.769 0.00 0.00 35.80 1.52
4621 4652 8.472007 TTGAAGCCTACAAATCCTTCTTTTTA 57.528 30.769 0.00 0.00 35.80 1.52
4622 4653 6.976934 TGAAGCCTACAAATCCTTCTTTTT 57.023 33.333 0.00 0.00 35.80 1.94
4623 4654 6.976934 TTGAAGCCTACAAATCCTTCTTTT 57.023 33.333 0.00 0.00 35.80 2.27
4624 4655 6.071165 CCATTGAAGCCTACAAATCCTTCTTT 60.071 38.462 0.00 0.00 35.80 2.52
4625 4656 5.420104 CCATTGAAGCCTACAAATCCTTCTT 59.580 40.000 0.00 0.00 35.80 2.52
4626 4657 4.952335 CCATTGAAGCCTACAAATCCTTCT 59.048 41.667 0.00 0.00 35.80 2.85
4627 4658 4.706962 ACCATTGAAGCCTACAAATCCTTC 59.293 41.667 0.00 0.00 35.45 3.46
4628 4659 4.463891 CACCATTGAAGCCTACAAATCCTT 59.536 41.667 0.00 0.00 0.00 3.36
4629 4660 4.019174 CACCATTGAAGCCTACAAATCCT 58.981 43.478 0.00 0.00 0.00 3.24
4630 4661 3.131046 CCACCATTGAAGCCTACAAATCC 59.869 47.826 0.00 0.00 0.00 3.01
4631 4662 4.016444 TCCACCATTGAAGCCTACAAATC 58.984 43.478 0.00 0.00 0.00 2.17
4632 4663 4.019174 CTCCACCATTGAAGCCTACAAAT 58.981 43.478 0.00 0.00 0.00 2.32
4633 4664 3.420893 CTCCACCATTGAAGCCTACAAA 58.579 45.455 0.00 0.00 0.00 2.83
4634 4665 2.879756 GCTCCACCATTGAAGCCTACAA 60.880 50.000 0.00 0.00 0.00 2.41
4635 4666 1.340017 GCTCCACCATTGAAGCCTACA 60.340 52.381 0.00 0.00 0.00 2.74
4636 4667 1.065126 AGCTCCACCATTGAAGCCTAC 60.065 52.381 0.00 0.00 0.00 3.18
4637 4668 1.289160 AGCTCCACCATTGAAGCCTA 58.711 50.000 0.00 0.00 0.00 3.93
4638 4669 1.065126 GTAGCTCCACCATTGAAGCCT 60.065 52.381 0.00 0.00 0.00 4.58
4639 4670 1.065126 AGTAGCTCCACCATTGAAGCC 60.065 52.381 0.00 0.00 0.00 4.35
4640 4671 2.409948 AGTAGCTCCACCATTGAAGC 57.590 50.000 0.00 0.00 0.00 3.86
4641 4672 7.987458 TCTAATTTAGTAGCTCCACCATTGAAG 59.013 37.037 0.00 0.00 0.00 3.02
4642 4673 7.857456 TCTAATTTAGTAGCTCCACCATTGAA 58.143 34.615 0.00 0.00 0.00 2.69
4643 4674 7.432148 TCTAATTTAGTAGCTCCACCATTGA 57.568 36.000 0.00 0.00 0.00 2.57
4644 4675 8.506168 TTTCTAATTTAGTAGCTCCACCATTG 57.494 34.615 0.00 0.00 0.00 2.82
4645 4676 9.528489 TTTTTCTAATTTAGTAGCTCCACCATT 57.472 29.630 0.00 0.00 0.00 3.16
4670 4701 7.496747 TGTCGGGAATCAAATTCTTTCTTTTT 58.503 30.769 0.18 0.00 39.24 1.94
4671 4702 7.049799 TGTCGGGAATCAAATTCTTTCTTTT 57.950 32.000 0.18 0.00 39.24 2.27
4672 4703 6.648879 TGTCGGGAATCAAATTCTTTCTTT 57.351 33.333 0.18 0.00 39.24 2.52
4673 4704 6.648879 TTGTCGGGAATCAAATTCTTTCTT 57.351 33.333 0.18 0.00 39.24 2.52
4674 4705 6.648879 TTTGTCGGGAATCAAATTCTTTCT 57.351 33.333 0.18 0.00 39.24 2.52
4675 4706 7.707774 TTTTTGTCGGGAATCAAATTCTTTC 57.292 32.000 0.18 0.00 39.24 2.62
4676 4707 7.173047 CCATTTTTGTCGGGAATCAAATTCTTT 59.827 33.333 0.18 0.00 39.24 2.52
4677 4708 6.650390 CCATTTTTGTCGGGAATCAAATTCTT 59.350 34.615 0.18 0.00 39.24 2.52
4678 4709 6.165577 CCATTTTTGTCGGGAATCAAATTCT 58.834 36.000 0.18 0.00 39.24 2.40
4679 4710 6.407475 CCATTTTTGTCGGGAATCAAATTC 57.593 37.500 0.00 0.00 38.55 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.