Multiple sequence alignment - TraesCS7A01G298600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G298600 chr7A 100.000 7879 0 0 1 7879 404468377 404476255 0.000000e+00 14550
1 TraesCS7A01G298600 chr7A 96.954 591 17 1 1371 1960 47043487 47044077 0.000000e+00 990
2 TraesCS7A01G298600 chr7D 93.308 5529 154 87 1959 7418 366448094 366453475 0.000000e+00 7962
3 TraesCS7A01G298600 chr7D 89.866 1046 29 25 348 1337 366447073 366448097 0.000000e+00 1273
4 TraesCS7A01G298600 chr7D 94.406 143 8 0 7483 7625 366453474 366453616 3.700000e-53 220
5 TraesCS7A01G298600 chr7D 76.923 351 68 12 5909 6252 434148978 434149322 3.750000e-43 187
6 TraesCS7A01G298600 chr7B 95.965 2503 41 18 5045 7517 319854727 319852255 0.000000e+00 4008
7 TraesCS7A01G298600 chr7B 90.467 1563 60 37 2988 4503 319857127 319855607 0.000000e+00 1978
8 TraesCS7A01G298600 chr7B 87.821 1051 26 33 344 1337 319859410 319858405 0.000000e+00 1138
9 TraesCS7A01G298600 chr7B 88.119 808 40 24 1961 2731 319858406 319857618 0.000000e+00 909
10 TraesCS7A01G298600 chr7B 88.055 586 20 18 4496 5066 319855291 319854741 0.000000e+00 649
11 TraesCS7A01G298600 chr7B 87.451 255 8 7 2753 3003 319857380 319857146 1.010000e-68 272
12 TraesCS7A01G298600 chr1A 97.297 629 16 1 1335 1962 300564436 300565064 0.000000e+00 1066
13 TraesCS7A01G298600 chr1A 95.840 625 23 3 1337 1960 469308488 469307866 0.000000e+00 1007
14 TraesCS7A01G298600 chr1A 94.910 609 30 1 1334 1941 66177628 66178236 0.000000e+00 952
15 TraesCS7A01G298600 chr1A 95.738 305 13 0 25 329 256705440 256705744 7.100000e-135 492
16 TraesCS7A01G298600 chr5A 96.197 631 20 3 1335 1962 576588294 576587665 0.000000e+00 1029
17 TraesCS7A01G298600 chr5A 93.651 630 34 3 1335 1963 573303722 573304346 0.000000e+00 937
18 TraesCS7A01G298600 chr5A 96.393 305 11 0 25 329 581119872 581119568 3.280000e-138 503
19 TraesCS7A01G298600 chr5A 83.235 340 51 4 5210 5546 654079756 654080092 2.760000e-79 307
20 TraesCS7A01G298600 chr5A 72.044 812 202 23 5908 6705 122956813 122957613 1.330000e-52 219
21 TraesCS7A01G298600 chr3A 95.741 634 22 4 1334 1963 508532568 508533200 0.000000e+00 1016
22 TraesCS7A01G298600 chr3A 94.754 305 16 0 25 329 579138782 579138478 7.150000e-130 475
23 TraesCS7A01G298600 chr5D 92.540 630 45 2 1335 1962 79107035 79107664 0.000000e+00 902
24 TraesCS7A01G298600 chr5D 82.058 379 58 7 5173 5546 526880890 526881263 1.650000e-81 315
25 TraesCS7A01G298600 chr5D 78.457 376 81 0 5185 5560 115949919 115950294 6.110000e-61 246
26 TraesCS7A01G298600 chr5D 71.887 811 203 23 5908 6704 115950705 115951504 2.230000e-50 211
27 TraesCS7A01G298600 chr4A 92.138 636 41 6 1335 1962 3341305 3340671 0.000000e+00 889
28 TraesCS7A01G298600 chr5B 96.721 305 10 0 25 329 508786456 508786152 7.050000e-140 508
29 TraesCS7A01G298600 chr5B 96.066 305 12 0 25 329 508792326 508792022 1.530000e-136 497
30 TraesCS7A01G298600 chr5B 96.066 305 12 0 25 329 508794484 508794180 1.530000e-136 497
31 TraesCS7A01G298600 chr5B 81.316 380 59 9 5173 5546 662961806 662962179 1.660000e-76 298
32 TraesCS7A01G298600 chr5B 72.414 812 199 23 5908 6705 127504709 127505509 1.320000e-57 235
33 TraesCS7A01G298600 chr4B 95.793 309 13 0 23 331 384287675 384287983 4.250000e-137 499
34 TraesCS7A01G298600 chr2A 95.082 305 15 0 25 329 597494201 597494505 1.540000e-131 481
35 TraesCS7A01G298600 chr2A 84.075 427 61 4 5164 5585 194130025 194129601 9.520000e-109 405
36 TraesCS7A01G298600 chr6B 94.426 305 17 0 25 329 214914645 214914341 3.330000e-128 470
37 TraesCS7A01G298600 chr2B 84.211 418 59 4 5173 5585 236527275 236526860 4.430000e-107 399
38 TraesCS7A01G298600 chr2D 83.971 418 60 4 5173 5585 179692156 179691741 2.060000e-105 394
39 TraesCS7A01G298600 chr4D 87.815 238 24 5 7641 7876 88508956 88509190 2.800000e-69 274
40 TraesCS7A01G298600 chr4D 86.134 238 27 6 7641 7876 88503841 88504074 1.310000e-62 252
41 TraesCS7A01G298600 chr1D 80.756 291 45 9 5208 5491 202568028 202568314 4.790000e-52 217


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G298600 chr7A 404468377 404476255 7878 False 14550.000000 14550 100.000000 1 7879 1 chr7A.!!$F2 7878
1 TraesCS7A01G298600 chr7A 47043487 47044077 590 False 990.000000 990 96.954000 1371 1960 1 chr7A.!!$F1 589
2 TraesCS7A01G298600 chr7D 366447073 366453616 6543 False 3151.666667 7962 92.526667 348 7625 3 chr7D.!!$F2 7277
3 TraesCS7A01G298600 chr7B 319852255 319859410 7155 True 1492.333333 4008 89.646333 344 7517 6 chr7B.!!$R1 7173
4 TraesCS7A01G298600 chr1A 300564436 300565064 628 False 1066.000000 1066 97.297000 1335 1962 1 chr1A.!!$F3 627
5 TraesCS7A01G298600 chr1A 469307866 469308488 622 True 1007.000000 1007 95.840000 1337 1960 1 chr1A.!!$R1 623
6 TraesCS7A01G298600 chr1A 66177628 66178236 608 False 952.000000 952 94.910000 1334 1941 1 chr1A.!!$F1 607
7 TraesCS7A01G298600 chr5A 576587665 576588294 629 True 1029.000000 1029 96.197000 1335 1962 1 chr5A.!!$R1 627
8 TraesCS7A01G298600 chr5A 573303722 573304346 624 False 937.000000 937 93.651000 1335 1963 1 chr5A.!!$F2 628
9 TraesCS7A01G298600 chr5A 122956813 122957613 800 False 219.000000 219 72.044000 5908 6705 1 chr5A.!!$F1 797
10 TraesCS7A01G298600 chr3A 508532568 508533200 632 False 1016.000000 1016 95.741000 1334 1963 1 chr3A.!!$F1 629
11 TraesCS7A01G298600 chr5D 79107035 79107664 629 False 902.000000 902 92.540000 1335 1962 1 chr5D.!!$F1 627
12 TraesCS7A01G298600 chr5D 115949919 115951504 1585 False 228.500000 246 75.172000 5185 6704 2 chr5D.!!$F3 1519
13 TraesCS7A01G298600 chr4A 3340671 3341305 634 True 889.000000 889 92.138000 1335 1962 1 chr4A.!!$R1 627
14 TraesCS7A01G298600 chr5B 508792022 508794484 2462 True 497.000000 497 96.066000 25 329 2 chr5B.!!$R2 304
15 TraesCS7A01G298600 chr5B 127504709 127505509 800 False 235.000000 235 72.414000 5908 6705 1 chr5B.!!$F1 797

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
337 338 0.035056 AAAGGAGCCCTCAATCGGTG 60.035 55.0 0.00 0.0 30.89 4.94 F
910 990 0.107165 TGAGCGTGGAGAGCTAGCTA 60.107 55.0 19.38 0.0 46.13 3.32 F
948 1028 0.242825 CCATTGTTGGTGCTGCTGAG 59.757 55.0 0.00 0.0 38.30 3.35 F
953 1033 0.250727 GTTGGTGCTGCTGAGGGTAA 60.251 55.0 0.00 0.0 0.00 2.85 F
954 1034 0.250727 TTGGTGCTGCTGAGGGTAAC 60.251 55.0 0.00 0.0 0.00 2.50 F
2498 2668 0.402504 TAAAATCTGGGTGTGCGGGT 59.597 50.0 0.00 0.0 0.00 5.28 F
3653 4548 0.737367 TGCTGATCTTCGTTCGGCTG 60.737 55.0 6.11 0.0 44.23 4.85 F
4443 5338 0.389948 GGTCTCTTTCGTCCGTGCAT 60.390 55.0 0.00 0.0 0.00 3.96 F
4697 5937 0.655733 CAACGTGTGGTTCCACTCAC 59.344 55.0 20.48 11.7 36.49 3.51 F
5657 6955 0.896226 AGACCAAGTACGAGAAGCCC 59.104 55.0 0.00 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2170 2312 0.032403 TTAACACCGACCAGACCACG 59.968 55.000 0.00 0.00 0.00 4.94 R
2498 2668 0.038890 TTGCAACCGAATCCATCCCA 59.961 50.000 0.00 0.00 0.00 4.37 R
2894 3282 0.458889 CATTCAAGCGGTGGCAATGG 60.459 55.000 0.00 0.00 43.41 3.16 R
2895 3283 1.079875 GCATTCAAGCGGTGGCAATG 61.080 55.000 8.38 8.38 43.41 2.82 R
2896 3284 1.216178 GCATTCAAGCGGTGGCAAT 59.784 52.632 0.00 0.00 43.41 3.56 R
4424 5319 0.389948 ATGCACGGACGAAAGAGACC 60.390 55.000 0.00 0.00 0.00 3.85 R
4697 5937 0.109086 ATTCCTCGTCACAGCGTGAG 60.109 55.000 10.88 6.69 43.57 3.51 R
5657 6955 1.300465 CATGGTCATCTCGAGGCCG 60.300 63.158 13.56 1.27 37.07 6.13 R
6422 7962 1.594331 GCCGGAATATCACCTTGGTC 58.406 55.000 5.05 0.00 0.00 4.02 R
7140 8742 0.097150 GTACCCGGTAAGTCGTCGTC 59.903 60.000 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 4.424061 TTCGCAGGATTGTCAAAATGAG 57.576 40.909 0.00 0.00 0.00 2.90
66 67 6.830324 CAGGATTGTCAAAATGAGGGAATAGA 59.170 38.462 0.00 0.00 0.00 1.98
108 109 7.399191 GGATAACATGTCCCATAGTATCCTACA 59.601 40.741 17.63 0.00 0.00 2.74
137 138 4.694982 TCAAAGAATGTTTGATAGCGCAGA 59.305 37.500 11.47 0.00 33.90 4.26
271 272 4.853924 ACGAGCATCACAGGAAAAATTT 57.146 36.364 0.00 0.00 33.17 1.82
275 276 6.206634 ACGAGCATCACAGGAAAAATTTCTAA 59.793 34.615 5.91 0.00 34.43 2.10
276 277 6.744537 CGAGCATCACAGGAAAAATTTCTAAG 59.255 38.462 5.91 0.12 34.43 2.18
277 278 6.928520 AGCATCACAGGAAAAATTTCTAAGG 58.071 36.000 5.91 0.00 37.35 2.69
278 279 6.721208 AGCATCACAGGAAAAATTTCTAAGGA 59.279 34.615 5.91 1.10 37.35 3.36
279 280 7.398332 AGCATCACAGGAAAAATTTCTAAGGAT 59.602 33.333 5.91 3.03 37.35 3.24
280 281 8.037166 GCATCACAGGAAAAATTTCTAAGGATT 58.963 33.333 5.91 0.00 37.35 3.01
281 282 9.578439 CATCACAGGAAAAATTTCTAAGGATTC 57.422 33.333 5.91 0.00 37.35 2.52
282 283 8.704849 TCACAGGAAAAATTTCTAAGGATTCA 57.295 30.769 5.91 0.00 37.35 2.57
283 284 9.142014 TCACAGGAAAAATTTCTAAGGATTCAA 57.858 29.630 5.91 0.00 37.35 2.69
284 285 9.762933 CACAGGAAAAATTTCTAAGGATTCAAA 57.237 29.630 5.91 0.00 37.35 2.69
304 305 9.713684 ATTCAAATCCTCCAAAAATCCTATACA 57.286 29.630 0.00 0.00 0.00 2.29
305 306 9.540538 TTCAAATCCTCCAAAAATCCTATACAA 57.459 29.630 0.00 0.00 0.00 2.41
306 307 9.713684 TCAAATCCTCCAAAAATCCTATACAAT 57.286 29.630 0.00 0.00 0.00 2.71
309 310 8.712228 ATCCTCCAAAAATCCTATACAATTCC 57.288 34.615 0.00 0.00 0.00 3.01
310 311 7.882755 TCCTCCAAAAATCCTATACAATTCCT 58.117 34.615 0.00 0.00 0.00 3.36
311 312 8.343787 TCCTCCAAAAATCCTATACAATTCCTT 58.656 33.333 0.00 0.00 0.00 3.36
312 313 8.981659 CCTCCAAAAATCCTATACAATTCCTTT 58.018 33.333 0.00 0.00 0.00 3.11
313 314 9.807649 CTCCAAAAATCCTATACAATTCCTTTG 57.192 33.333 0.00 0.00 41.36 2.77
314 315 9.540538 TCCAAAAATCCTATACAATTCCTTTGA 57.459 29.630 0.00 0.00 38.76 2.69
331 332 5.982890 CTTTGAATTAAAGGAGCCCTCAA 57.017 39.130 0.00 0.00 41.68 3.02
332 333 6.535963 CTTTGAATTAAAGGAGCCCTCAAT 57.464 37.500 0.00 0.00 41.68 2.57
333 334 6.530019 TTTGAATTAAAGGAGCCCTCAATC 57.470 37.500 0.00 0.00 30.89 2.67
334 335 4.199310 TGAATTAAAGGAGCCCTCAATCG 58.801 43.478 0.00 0.00 30.89 3.34
335 336 2.710096 TTAAAGGAGCCCTCAATCGG 57.290 50.000 0.00 0.00 30.89 4.18
336 337 1.580059 TAAAGGAGCCCTCAATCGGT 58.420 50.000 0.00 0.00 30.89 4.69
337 338 0.035056 AAAGGAGCCCTCAATCGGTG 60.035 55.000 0.00 0.00 30.89 4.94
338 339 1.915078 AAGGAGCCCTCAATCGGTGG 61.915 60.000 0.00 0.00 30.89 4.61
339 340 2.367202 GGAGCCCTCAATCGGTGGA 61.367 63.158 0.00 0.00 31.57 4.02
340 341 1.144936 GAGCCCTCAATCGGTGGAG 59.855 63.158 0.00 0.00 31.57 3.86
387 388 0.109365 TTGCGGCACCAATCAATTCG 60.109 50.000 0.05 0.00 0.00 3.34
397 398 7.221838 CGGCACCAATCAATTCGTTAATTAATT 59.778 33.333 5.89 5.89 33.45 1.40
438 441 7.945033 TGCAAGCGAAAAGATAAAAGAAAAT 57.055 28.000 0.00 0.00 0.00 1.82
455 458 5.644644 AGAAAATTCGGAAATGCAAGCTAG 58.355 37.500 0.00 0.00 0.00 3.42
674 724 5.000012 TGAAACACAATTACAACCCACAC 58.000 39.130 0.00 0.00 0.00 3.82
688 738 1.528309 CACACACACCTCCAACCCC 60.528 63.158 0.00 0.00 0.00 4.95
726 776 0.250038 AAGACAAGCGAGCTGAGCAA 60.250 50.000 7.39 0.00 37.01 3.91
812 868 0.462759 CATTTCTCGCACCTCCTCCC 60.463 60.000 0.00 0.00 0.00 4.30
813 869 1.627297 ATTTCTCGCACCTCCTCCCC 61.627 60.000 0.00 0.00 0.00 4.81
814 870 2.748641 TTTCTCGCACCTCCTCCCCT 62.749 60.000 0.00 0.00 0.00 4.79
815 871 3.151022 CTCGCACCTCCTCCCCTC 61.151 72.222 0.00 0.00 0.00 4.30
816 872 4.779733 TCGCACCTCCTCCCCTCC 62.780 72.222 0.00 0.00 0.00 4.30
819 875 4.825679 CACCTCCTCCCCTCCCCC 62.826 77.778 0.00 0.00 0.00 5.40
821 877 4.179599 CCTCCTCCCCTCCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
858 923 3.515104 TCATTCATTGCTTCCTTTTCCCC 59.485 43.478 0.00 0.00 0.00 4.81
907 987 1.732917 CCTGAGCGTGGAGAGCTAG 59.267 63.158 0.00 0.00 46.13 3.42
910 990 0.107165 TGAGCGTGGAGAGCTAGCTA 60.107 55.000 19.38 0.00 46.13 3.32
911 991 0.309612 GAGCGTGGAGAGCTAGCTAC 59.690 60.000 19.38 14.62 46.13 3.58
913 993 1.104577 GCGTGGAGAGCTAGCTACCT 61.105 60.000 28.73 19.77 0.00 3.08
916 996 1.115467 TGGAGAGCTAGCTACCTTGC 58.885 55.000 28.73 17.31 39.64 4.01
917 997 0.391228 GGAGAGCTAGCTACCTTGCC 59.609 60.000 19.38 9.04 40.10 4.52
918 998 1.408969 GAGAGCTAGCTACCTTGCCT 58.591 55.000 19.38 8.52 40.10 4.75
919 999 1.068434 GAGAGCTAGCTACCTTGCCTG 59.932 57.143 19.38 0.00 40.10 4.85
920 1000 0.531753 GAGCTAGCTACCTTGCCTGC 60.532 60.000 19.38 0.00 40.10 4.85
946 1026 1.373748 GCCATTGTTGGTGCTGCTG 60.374 57.895 0.00 0.00 45.57 4.41
947 1027 1.808531 GCCATTGTTGGTGCTGCTGA 61.809 55.000 0.00 0.00 45.57 4.26
948 1028 0.242825 CCATTGTTGGTGCTGCTGAG 59.757 55.000 0.00 0.00 38.30 3.35
949 1029 0.242825 CATTGTTGGTGCTGCTGAGG 59.757 55.000 0.00 0.00 0.00 3.86
950 1030 0.896940 ATTGTTGGTGCTGCTGAGGG 60.897 55.000 0.00 0.00 0.00 4.30
951 1031 2.113986 GTTGGTGCTGCTGAGGGT 59.886 61.111 0.00 0.00 0.00 4.34
952 1032 1.374947 GTTGGTGCTGCTGAGGGTA 59.625 57.895 0.00 0.00 0.00 3.69
953 1033 0.250727 GTTGGTGCTGCTGAGGGTAA 60.251 55.000 0.00 0.00 0.00 2.85
954 1034 0.250727 TTGGTGCTGCTGAGGGTAAC 60.251 55.000 0.00 0.00 0.00 2.50
985 1069 0.790814 GTAAAGGAGAGTGCGTGCAC 59.209 55.000 16.91 16.91 46.50 4.57
997 1081 3.106407 GTGCACTGAGGACGACGC 61.106 66.667 10.32 0.00 0.00 5.19
1447 1534 7.680730 AGTTTTCCAGCGGATTGTCTATATAT 58.319 34.615 0.00 0.00 0.00 0.86
1837 1963 0.971386 AAATGTGGACGACGGGTAGT 59.029 50.000 0.00 0.00 0.00 2.73
1881 2007 7.849804 ATTTTAGATGACGCAATAGACAAGT 57.150 32.000 0.00 0.00 0.00 3.16
1950 2077 2.035704 CACCATTTGCACAAGCCACTAA 59.964 45.455 0.00 0.00 41.13 2.24
1952 2079 3.133721 ACCATTTGCACAAGCCACTAAAA 59.866 39.130 0.00 0.00 41.13 1.52
1998 2128 6.912082 TGCGTCACAGTAGTAACAATTACTA 58.088 36.000 4.66 4.66 44.30 1.82
1999 2129 7.025365 TGCGTCACAGTAGTAACAATTACTAG 58.975 38.462 8.38 0.00 46.29 2.57
2001 2131 8.177663 GCGTCACAGTAGTAACAATTACTAGTA 58.822 37.037 13.27 0.00 45.82 1.82
2002 2132 9.699985 CGTCACAGTAGTAACAATTACTAGTAG 57.300 37.037 13.27 10.30 45.82 2.57
2145 2278 2.583593 GGCGGTGCTCATCGAGAC 60.584 66.667 6.73 0.00 37.01 3.36
2147 2280 1.875813 GCGGTGCTCATCGAGACTG 60.876 63.158 6.73 0.00 37.01 3.51
2148 2281 1.226802 CGGTGCTCATCGAGACTGG 60.227 63.158 0.00 0.00 37.01 4.00
2151 2293 1.202313 GGTGCTCATCGAGACTGGTAC 60.202 57.143 0.00 0.00 0.00 3.34
2154 2296 3.002862 GTGCTCATCGAGACTGGTACTAG 59.997 52.174 4.44 4.44 0.00 2.57
2290 2446 2.569059 CAATGATGGCTCGAATCCACT 58.431 47.619 8.09 0.00 36.26 4.00
2352 2508 2.115291 GGGCGCTGGTTCTTCCATC 61.115 63.158 7.64 0.00 46.12 3.51
2498 2668 0.402504 TAAAATCTGGGTGTGCGGGT 59.597 50.000 0.00 0.00 0.00 5.28
2506 2676 4.028490 GTGTGCGGGTGGGATGGA 62.028 66.667 0.00 0.00 0.00 3.41
2507 2677 3.014538 TGTGCGGGTGGGATGGAT 61.015 61.111 0.00 0.00 0.00 3.41
2510 2680 2.591715 GCGGGTGGGATGGATTCG 60.592 66.667 0.00 0.00 0.00 3.34
2511 2681 2.111043 CGGGTGGGATGGATTCGG 59.889 66.667 0.00 0.00 0.00 4.30
2512 2682 2.742116 CGGGTGGGATGGATTCGGT 61.742 63.158 0.00 0.00 0.00 4.69
2519 2689 1.067516 GGGATGGATTCGGTTGCAATG 59.932 52.381 0.59 0.00 0.00 2.82
2542 2712 3.561725 GCAATAGGAATCCGAGGTGAAAG 59.438 47.826 0.00 0.00 0.00 2.62
2550 2720 2.103373 TCCGAGGTGAAAGGAGATGAG 58.897 52.381 0.00 0.00 0.00 2.90
2551 2721 2.103373 CCGAGGTGAAAGGAGATGAGA 58.897 52.381 0.00 0.00 0.00 3.27
2552 2722 2.697751 CCGAGGTGAAAGGAGATGAGAT 59.302 50.000 0.00 0.00 0.00 2.75
2553 2723 3.492309 CCGAGGTGAAAGGAGATGAGATG 60.492 52.174 0.00 0.00 0.00 2.90
2554 2724 3.382865 CGAGGTGAAAGGAGATGAGATGA 59.617 47.826 0.00 0.00 0.00 2.92
2642 2812 2.606308 GGACGTCGCAGTGAGAAAGTTA 60.606 50.000 9.92 0.00 0.00 2.24
2746 3128 8.838649 ATGTATGGTATGGTAGTATATGAGCA 57.161 34.615 0.00 0.00 0.00 4.26
2748 3130 8.914011 TGTATGGTATGGTAGTATATGAGCATC 58.086 37.037 5.17 0.28 35.50 3.91
2751 3133 8.753497 TGGTATGGTAGTATATGAGCATCTAG 57.247 38.462 5.17 0.00 35.50 2.43
2777 3163 8.410141 GTCTAGTTATAGATGGATGATGCTACC 58.590 40.741 0.00 0.00 40.16 3.18
2788 3174 2.707529 GATGCTACCGCTGGAGCCTC 62.708 65.000 10.15 5.87 37.94 4.70
2805 3191 5.804473 GGAGCCTCTAGTACGTTAGTTTTTC 59.196 44.000 0.00 0.00 0.00 2.29
2851 3239 7.943413 ACGAGAAGAAGATTATCATGTCATG 57.057 36.000 6.47 6.47 0.00 3.07
2854 3242 7.650903 CGAGAAGAAGATTATCATGTCATGTCA 59.349 37.037 12.54 0.00 0.00 3.58
2881 3269 6.431234 GTCATAGAAAGGAGGAGAAGCAAAAA 59.569 38.462 0.00 0.00 0.00 1.94
3066 3499 9.219603 CAACATCTTCAAAGTACTCCAAAGATA 57.780 33.333 18.63 2.52 33.06 1.98
3067 3500 9.793259 AACATCTTCAAAGTACTCCAAAGATAA 57.207 29.630 18.63 2.01 33.06 1.75
3068 3501 9.793259 ACATCTTCAAAGTACTCCAAAGATAAA 57.207 29.630 18.63 1.76 33.06 1.40
3170 3981 3.435105 TTTGGCGCCAATAGCATAAAG 57.565 42.857 40.32 0.00 44.04 1.85
3172 3983 2.649190 TGGCGCCAATAGCATAAAGAA 58.351 42.857 30.74 0.00 44.04 2.52
3173 3984 2.618241 TGGCGCCAATAGCATAAAGAAG 59.382 45.455 30.74 0.00 44.04 2.85
3265 4081 4.854784 TCGCGTCCATGCTCTCGC 62.855 66.667 5.77 10.37 44.23 5.03
3503 4381 3.641437 TGCAAAGGGAAAAGATGAACG 57.359 42.857 0.00 0.00 0.00 3.95
3548 4443 1.869767 GCACCCAATCATCACTCGATC 59.130 52.381 0.00 0.00 0.00 3.69
3556 4451 5.277683 CCAATCATCACTCGATCAATCCAAC 60.278 44.000 0.00 0.00 0.00 3.77
3557 4452 4.470334 TCATCACTCGATCAATCCAACA 57.530 40.909 0.00 0.00 0.00 3.33
3564 4459 8.105097 TCACTCGATCAATCCAACAATTTTTA 57.895 30.769 0.00 0.00 0.00 1.52
3565 4460 8.020819 TCACTCGATCAATCCAACAATTTTTAC 58.979 33.333 0.00 0.00 0.00 2.01
3566 4461 8.023128 CACTCGATCAATCCAACAATTTTTACT 58.977 33.333 0.00 0.00 0.00 2.24
3567 4462 8.576442 ACTCGATCAATCCAACAATTTTTACTT 58.424 29.630 0.00 0.00 0.00 2.24
3577 4472 9.070179 TCCAACAATTTTTACTTTACTACTCCC 57.930 33.333 0.00 0.00 0.00 4.30
3578 4473 8.852135 CCAACAATTTTTACTTTACTACTCCCA 58.148 33.333 0.00 0.00 0.00 4.37
3579 4474 9.673454 CAACAATTTTTACTTTACTACTCCCAC 57.327 33.333 0.00 0.00 0.00 4.61
3580 4475 8.983702 ACAATTTTTACTTTACTACTCCCACA 57.016 30.769 0.00 0.00 0.00 4.17
3581 4476 9.411189 ACAATTTTTACTTTACTACTCCCACAA 57.589 29.630 0.00 0.00 0.00 3.33
3582 4477 9.893305 CAATTTTTACTTTACTACTCCCACAAG 57.107 33.333 0.00 0.00 0.00 3.16
3583 4478 9.856162 AATTTTTACTTTACTACTCCCACAAGA 57.144 29.630 0.00 0.00 0.00 3.02
3584 4479 9.856162 ATTTTTACTTTACTACTCCCACAAGAA 57.144 29.630 0.00 0.00 0.00 2.52
3585 4480 8.667076 TTTTACTTTACTACTCCCACAAGAAC 57.333 34.615 0.00 0.00 0.00 3.01
3650 4545 1.084370 GGGTGCTGATCTTCGTTCGG 61.084 60.000 0.00 0.00 0.00 4.30
3653 4548 0.737367 TGCTGATCTTCGTTCGGCTG 60.737 55.000 6.11 0.00 44.23 4.85
3929 4824 2.266055 CTCTCCACCGCCAACTCC 59.734 66.667 0.00 0.00 0.00 3.85
4202 5097 1.289066 CGACGAGTTCAAGGCCAGA 59.711 57.895 5.01 0.00 0.00 3.86
4388 5283 3.280295 CATCGTCCTGGTCAGTACTAGT 58.720 50.000 0.00 0.00 32.53 2.57
4389 5284 3.430042 TCGTCCTGGTCAGTACTAGTT 57.570 47.619 0.00 0.00 32.53 2.24
4390 5285 3.079578 TCGTCCTGGTCAGTACTAGTTG 58.920 50.000 0.00 0.00 32.53 3.16
4395 5290 5.826737 GTCCTGGTCAGTACTAGTTGCTATA 59.173 44.000 0.00 0.00 32.53 1.31
4424 5319 7.893124 TCACTAGGACTACCATTTACTTAGG 57.107 40.000 0.00 0.00 38.94 2.69
4425 5320 6.837568 TCACTAGGACTACCATTTACTTAGGG 59.162 42.308 0.00 0.00 38.94 3.53
4426 5321 6.610425 CACTAGGACTACCATTTACTTAGGGT 59.390 42.308 0.00 0.00 38.94 4.34
4427 5322 6.838090 ACTAGGACTACCATTTACTTAGGGTC 59.162 42.308 0.00 0.00 38.94 4.46
4428 5323 5.851418 AGGACTACCATTTACTTAGGGTCT 58.149 41.667 0.00 0.00 38.94 3.85
4432 5327 7.092979 GGACTACCATTTACTTAGGGTCTCTTT 60.093 40.741 0.00 0.00 34.88 2.52
4434 5329 5.731591 ACCATTTACTTAGGGTCTCTTTCG 58.268 41.667 0.00 0.00 0.00 3.46
4435 5330 5.247792 ACCATTTACTTAGGGTCTCTTTCGT 59.752 40.000 0.00 0.00 0.00 3.85
4436 5331 5.811100 CCATTTACTTAGGGTCTCTTTCGTC 59.189 44.000 0.00 0.00 0.00 4.20
4438 5333 1.817447 ACTTAGGGTCTCTTTCGTCCG 59.183 52.381 0.00 0.00 0.00 4.79
4439 5334 1.817447 CTTAGGGTCTCTTTCGTCCGT 59.183 52.381 0.00 0.00 0.00 4.69
4440 5335 1.171308 TAGGGTCTCTTTCGTCCGTG 58.829 55.000 0.00 0.00 0.00 4.94
4441 5336 1.737008 GGGTCTCTTTCGTCCGTGC 60.737 63.158 0.00 0.00 0.00 5.34
4442 5337 1.006571 GGTCTCTTTCGTCCGTGCA 60.007 57.895 0.00 0.00 0.00 4.57
4443 5338 0.389948 GGTCTCTTTCGTCCGTGCAT 60.390 55.000 0.00 0.00 0.00 3.96
4444 5339 0.716108 GTCTCTTTCGTCCGTGCATG 59.284 55.000 0.00 0.00 0.00 4.06
4531 5770 4.671590 ATGCCTGCCTGCACTGCA 62.672 61.111 12.34 12.34 45.48 4.41
4534 5773 3.362797 CCTGCCTGCACTGCACTG 61.363 66.667 0.00 0.00 33.79 3.66
4535 5774 4.039357 CTGCCTGCACTGCACTGC 62.039 66.667 10.99 10.99 37.70 4.40
4579 5818 2.002586 GACAGAATGGACGTGGTGATG 58.997 52.381 0.00 0.00 43.62 3.07
4662 5901 0.742281 TGCATGCTTCTCTTCTCGCC 60.742 55.000 20.33 0.00 0.00 5.54
4697 5937 0.655733 CAACGTGTGGTTCCACTCAC 59.344 55.000 20.48 11.70 36.49 3.51
4701 5941 1.583054 GTGTGGTTCCACTCACTCAC 58.417 55.000 20.48 7.67 37.78 3.51
4825 6068 6.541278 TCTTAACTGCCTCAATCATTCATCAG 59.459 38.462 0.00 0.00 0.00 2.90
4826 6069 4.232188 ACTGCCTCAATCATTCATCAGT 57.768 40.909 0.00 0.00 0.00 3.41
4827 6070 4.597004 ACTGCCTCAATCATTCATCAGTT 58.403 39.130 0.00 0.00 30.30 3.16
4828 6071 5.014858 ACTGCCTCAATCATTCATCAGTTT 58.985 37.500 0.00 0.00 30.30 2.66
4858 6101 2.039348 TGCCCAACTCTTAACCCTGTAC 59.961 50.000 0.00 0.00 0.00 2.90
4859 6102 2.305052 GCCCAACTCTTAACCCTGTACT 59.695 50.000 0.00 0.00 0.00 2.73
4860 6103 3.868754 GCCCAACTCTTAACCCTGTACTG 60.869 52.174 0.00 0.00 0.00 2.74
4861 6104 3.326880 CCCAACTCTTAACCCTGTACTGT 59.673 47.826 0.00 0.00 0.00 3.55
4862 6105 4.529377 CCCAACTCTTAACCCTGTACTGTA 59.471 45.833 0.00 0.00 0.00 2.74
4863 6106 5.337330 CCCAACTCTTAACCCTGTACTGTAG 60.337 48.000 0.00 0.00 0.00 2.74
4864 6107 5.245526 CCAACTCTTAACCCTGTACTGTAGT 59.754 44.000 0.00 0.00 0.00 2.73
4865 6108 6.435277 CCAACTCTTAACCCTGTACTGTAGTA 59.565 42.308 0.00 0.00 0.00 1.82
4866 6109 7.123847 CCAACTCTTAACCCTGTACTGTAGTAT 59.876 40.741 0.00 0.00 32.54 2.12
4867 6110 9.182214 CAACTCTTAACCCTGTACTGTAGTATA 57.818 37.037 0.00 0.00 32.54 1.47
4868 6111 8.744568 ACTCTTAACCCTGTACTGTAGTATAC 57.255 38.462 0.00 0.00 43.42 1.47
4869 6112 8.555729 ACTCTTAACCCTGTACTGTAGTATACT 58.444 37.037 10.87 10.87 43.54 2.12
4870 6113 9.406113 CTCTTAACCCTGTACTGTAGTATACTT 57.594 37.037 11.40 0.00 43.54 2.24
4963 6216 8.000780 AGAATCATTTGACCTTTTACTATGGC 57.999 34.615 0.00 0.00 0.00 4.40
4965 6218 5.492895 TCATTTGACCTTTTACTATGGCGA 58.507 37.500 0.00 0.00 0.00 5.54
4966 6219 6.119536 TCATTTGACCTTTTACTATGGCGAT 58.880 36.000 0.00 0.00 0.00 4.58
4967 6220 6.260050 TCATTTGACCTTTTACTATGGCGATC 59.740 38.462 0.00 0.00 0.00 3.69
4968 6221 3.713288 TGACCTTTTACTATGGCGATCG 58.287 45.455 11.69 11.69 0.00 3.69
4969 6222 3.382227 TGACCTTTTACTATGGCGATCGA 59.618 43.478 21.57 0.00 0.00 3.59
4970 6223 3.978687 ACCTTTTACTATGGCGATCGAG 58.021 45.455 21.57 9.80 0.00 4.04
4971 6224 3.635373 ACCTTTTACTATGGCGATCGAGA 59.365 43.478 21.57 3.81 0.00 4.04
4972 6225 4.098960 ACCTTTTACTATGGCGATCGAGAA 59.901 41.667 21.57 2.95 0.00 2.87
4973 6226 4.681942 CCTTTTACTATGGCGATCGAGAAG 59.318 45.833 21.57 12.04 0.00 2.85
4974 6227 4.913335 TTTACTATGGCGATCGAGAAGT 57.087 40.909 21.57 17.01 0.00 3.01
4975 6228 6.381481 TTTTACTATGGCGATCGAGAAGTA 57.619 37.500 21.57 16.03 0.00 2.24
4976 6229 6.381481 TTTACTATGGCGATCGAGAAGTAA 57.619 37.500 21.57 20.34 0.00 2.24
4977 6230 4.913335 ACTATGGCGATCGAGAAGTAAA 57.087 40.909 21.57 0.00 0.00 2.01
5657 6955 0.896226 AGACCAAGTACGAGAAGCCC 59.104 55.000 0.00 0.00 0.00 5.19
5894 7309 1.071567 CGTTCGAGAAGAAGACCGGC 61.072 60.000 0.00 0.00 39.95 6.13
6248 7780 2.324330 CGGCCACTTCATCGTGCAA 61.324 57.895 2.24 0.00 33.60 4.08
6575 8129 7.764331 TCATCATCATTTTCGTCAACATCATT 58.236 30.769 0.00 0.00 0.00 2.57
6875 8456 0.981183 CAGGGTACTACAACTGGCCA 59.019 55.000 4.71 4.71 0.00 5.36
6909 8505 3.423154 GACTTTGCCGCCGGACAG 61.423 66.667 7.68 0.40 0.00 3.51
6928 8530 1.889829 AGGACGACCTGAGACAAGAAG 59.110 52.381 5.39 0.00 45.92 2.85
6995 8597 1.150536 AGAGCCCGCCAAAGTTTGA 59.849 52.632 17.33 0.00 0.00 2.69
7140 8742 2.074547 TTACGCGAAGAACAAGGGAG 57.925 50.000 15.93 0.00 0.00 4.30
7141 8743 1.250328 TACGCGAAGAACAAGGGAGA 58.750 50.000 15.93 0.00 0.00 3.71
7142 8744 0.319641 ACGCGAAGAACAAGGGAGAC 60.320 55.000 15.93 0.00 0.00 3.36
7337 8947 8.792830 TCTTTTTGTCAGGGAATCTACTTATG 57.207 34.615 0.00 0.00 0.00 1.90
7376 8991 5.454232 CACAATTGTTACTTCGTCCAACAAC 59.546 40.000 8.77 0.00 42.94 3.32
7379 8994 5.821516 TTGTTACTTCGTCCAACAACAAT 57.178 34.783 0.00 0.00 37.27 2.71
7383 8998 8.604640 TGTTACTTCGTCCAACAACAATAATA 57.395 30.769 0.00 0.00 0.00 0.98
7411 9026 8.792831 AATCACGTACTATTTACCGTCTAATG 57.207 34.615 0.00 0.00 0.00 1.90
7432 9047 1.896465 GCTTGACAGTAGTGGGAGACT 59.104 52.381 1.92 0.00 38.88 3.24
7433 9048 3.090037 GCTTGACAGTAGTGGGAGACTA 58.910 50.000 1.92 0.00 35.96 2.59
7434 9049 3.129638 GCTTGACAGTAGTGGGAGACTAG 59.870 52.174 1.92 0.00 37.87 2.57
7435 9050 2.724454 TGACAGTAGTGGGAGACTAGC 58.276 52.381 1.92 0.00 37.87 3.42
7436 9051 2.025898 GACAGTAGTGGGAGACTAGCC 58.974 57.143 1.92 0.00 37.87 3.93
7437 9052 1.358103 ACAGTAGTGGGAGACTAGCCA 59.642 52.381 1.92 0.00 37.87 4.75
7438 9053 2.028130 CAGTAGTGGGAGACTAGCCAG 58.972 57.143 0.00 0.00 37.87 4.85
7439 9054 1.641714 AGTAGTGGGAGACTAGCCAGT 59.358 52.381 0.00 0.00 37.87 4.00
7478 9093 5.163622 CGGGCATGTTCTCTTCATTATGTTT 60.164 40.000 0.00 0.00 0.00 2.83
7480 9095 6.532657 GGGCATGTTCTCTTCATTATGTTTTG 59.467 38.462 0.00 0.00 0.00 2.44
7481 9096 6.532657 GGCATGTTCTCTTCATTATGTTTTGG 59.467 38.462 0.00 0.00 0.00 3.28
7549 9164 8.121305 TGTATAAAGCTGAAAACCATGTGATT 57.879 30.769 0.00 0.00 0.00 2.57
7581 9196 7.944729 AGTTGCACTATTAATGTTCCTGATT 57.055 32.000 0.00 0.00 0.00 2.57
7606 9221 2.455674 TCATTGTGGACTTCGGAGTG 57.544 50.000 0.00 0.00 35.88 3.51
7609 9224 1.764571 TTGTGGACTTCGGAGTGGGG 61.765 60.000 0.00 0.00 35.88 4.96
7630 9245 3.854286 CGTATCCTCCGCATTTGTTAC 57.146 47.619 0.00 0.00 0.00 2.50
7632 9247 3.245284 CGTATCCTCCGCATTTGTTACAG 59.755 47.826 0.00 0.00 0.00 2.74
7633 9248 3.627395 ATCCTCCGCATTTGTTACAGA 57.373 42.857 0.00 0.00 0.00 3.41
7635 9250 1.737793 CCTCCGCATTTGTTACAGACC 59.262 52.381 0.00 0.00 0.00 3.85
7636 9251 1.393539 CTCCGCATTTGTTACAGACCG 59.606 52.381 0.00 0.00 0.00 4.79
7638 9253 2.006888 CCGCATTTGTTACAGACCGAT 58.993 47.619 0.70 0.00 0.00 4.18
7639 9254 2.030457 CCGCATTTGTTACAGACCGATC 59.970 50.000 0.70 0.00 0.00 3.69
7640 9255 2.930040 CGCATTTGTTACAGACCGATCT 59.070 45.455 0.00 0.00 34.57 2.75
7653 9268 2.659897 GATCTGGCGGCGCTACAG 60.660 66.667 32.30 28.50 0.00 2.74
7654 9269 4.227134 ATCTGGCGGCGCTACAGG 62.227 66.667 32.30 14.41 33.19 4.00
7659 9274 4.577246 GCGGCGCTACAGGGAGAG 62.577 72.222 26.86 0.00 0.00 3.20
7660 9275 4.577246 CGGCGCTACAGGGAGAGC 62.577 72.222 7.64 0.00 41.09 4.09
7662 9277 2.105930 GCGCTACAGGGAGAGCAG 59.894 66.667 0.00 0.00 41.42 4.24
7663 9278 2.418910 GCGCTACAGGGAGAGCAGA 61.419 63.158 0.00 0.00 41.42 4.26
7665 9280 1.733402 CGCTACAGGGAGAGCAGAGG 61.733 65.000 0.00 0.00 38.69 3.69
7666 9281 1.398958 GCTACAGGGAGAGCAGAGGG 61.399 65.000 0.00 0.00 38.62 4.30
7667 9282 0.758685 CTACAGGGAGAGCAGAGGGG 60.759 65.000 0.00 0.00 0.00 4.79
7668 9283 1.221909 TACAGGGAGAGCAGAGGGGA 61.222 60.000 0.00 0.00 0.00 4.81
7669 9284 1.074623 CAGGGAGAGCAGAGGGGAT 60.075 63.158 0.00 0.00 0.00 3.85
7673 9288 2.089696 AGGGAGAGCAGAGGGGATAATT 60.090 50.000 0.00 0.00 0.00 1.40
7674 9289 2.713708 GGGAGAGCAGAGGGGATAATTT 59.286 50.000 0.00 0.00 0.00 1.82
7675 9290 3.497584 GGGAGAGCAGAGGGGATAATTTG 60.498 52.174 0.00 0.00 0.00 2.32
7676 9291 3.392616 GGAGAGCAGAGGGGATAATTTGA 59.607 47.826 0.00 0.00 0.00 2.69
7677 9292 4.504689 GGAGAGCAGAGGGGATAATTTGAG 60.505 50.000 0.00 0.00 0.00 3.02
7679 9294 4.347583 AGAGCAGAGGGGATAATTTGAGAG 59.652 45.833 0.00 0.00 0.00 3.20
7681 9296 4.347583 AGCAGAGGGGATAATTTGAGAGAG 59.652 45.833 0.00 0.00 0.00 3.20
7682 9297 4.640364 CAGAGGGGATAATTTGAGAGAGC 58.360 47.826 0.00 0.00 0.00 4.09
7683 9298 4.102210 CAGAGGGGATAATTTGAGAGAGCA 59.898 45.833 0.00 0.00 0.00 4.26
7684 9299 4.723789 AGAGGGGATAATTTGAGAGAGCAA 59.276 41.667 0.00 0.00 0.00 3.91
7685 9300 5.046288 AGGGGATAATTTGAGAGAGCAAG 57.954 43.478 0.00 0.00 0.00 4.01
7686 9301 4.140536 GGGGATAATTTGAGAGAGCAAGG 58.859 47.826 0.00 0.00 0.00 3.61
7687 9302 4.140536 GGGATAATTTGAGAGAGCAAGGG 58.859 47.826 0.00 0.00 0.00 3.95
7688 9303 4.140536 GGATAATTTGAGAGAGCAAGGGG 58.859 47.826 0.00 0.00 0.00 4.79
7704 9319 3.352505 GGGGGATTAGGGTTCTGGA 57.647 57.895 0.00 0.00 0.00 3.86
7705 9320 1.141185 GGGGGATTAGGGTTCTGGAG 58.859 60.000 0.00 0.00 0.00 3.86
7706 9321 1.141185 GGGGATTAGGGTTCTGGAGG 58.859 60.000 0.00 0.00 0.00 4.30
7712 9327 2.552093 TAGGGTTCTGGAGGAGAAGG 57.448 55.000 0.00 0.00 41.58 3.46
7713 9328 0.793617 AGGGTTCTGGAGGAGAAGGA 59.206 55.000 0.00 0.00 41.58 3.36
7715 9330 0.533032 GGTTCTGGAGGAGAAGGACG 59.467 60.000 0.00 0.00 41.58 4.79
7716 9331 0.533032 GTTCTGGAGGAGAAGGACGG 59.467 60.000 0.00 0.00 41.58 4.79
7717 9332 1.258445 TTCTGGAGGAGAAGGACGGC 61.258 60.000 0.00 0.00 35.64 5.68
7718 9333 1.684049 CTGGAGGAGAAGGACGGCT 60.684 63.158 0.00 0.00 0.00 5.52
7719 9334 1.229209 TGGAGGAGAAGGACGGCTT 60.229 57.895 0.00 0.00 0.00 4.35
7720 9335 1.258445 TGGAGGAGAAGGACGGCTTC 61.258 60.000 0.00 0.00 0.00 3.86
7721 9336 0.973496 GGAGGAGAAGGACGGCTTCT 60.973 60.000 0.00 0.00 43.09 2.85
7725 9340 3.681909 AGAAGGACGGCTTCTCTCT 57.318 52.632 0.00 0.00 36.54 3.10
7726 9341 1.470051 AGAAGGACGGCTTCTCTCTC 58.530 55.000 0.00 0.00 36.54 3.20
7727 9342 1.005450 AGAAGGACGGCTTCTCTCTCT 59.995 52.381 0.00 0.00 36.54 3.10
7728 9343 1.404035 GAAGGACGGCTTCTCTCTCTC 59.596 57.143 0.00 0.00 0.00 3.20
7729 9344 0.329931 AGGACGGCTTCTCTCTCTCA 59.670 55.000 0.00 0.00 0.00 3.27
7730 9345 0.738389 GGACGGCTTCTCTCTCTCAG 59.262 60.000 0.00 0.00 0.00 3.35
7731 9346 0.100503 GACGGCTTCTCTCTCTCAGC 59.899 60.000 0.00 0.00 0.00 4.26
7735 9350 1.185315 GCTTCTCTCTCTCAGCCAGT 58.815 55.000 0.00 0.00 0.00 4.00
7736 9351 1.550072 GCTTCTCTCTCTCAGCCAGTT 59.450 52.381 0.00 0.00 0.00 3.16
7737 9352 2.417243 GCTTCTCTCTCTCAGCCAGTTC 60.417 54.545 0.00 0.00 0.00 3.01
7738 9353 1.458398 TCTCTCTCTCAGCCAGTTCG 58.542 55.000 0.00 0.00 0.00 3.95
7739 9354 1.173043 CTCTCTCTCAGCCAGTTCGT 58.827 55.000 0.00 0.00 0.00 3.85
7740 9355 0.884514 TCTCTCTCAGCCAGTTCGTG 59.115 55.000 0.00 0.00 0.00 4.35
7741 9356 0.884514 CTCTCTCAGCCAGTTCGTGA 59.115 55.000 0.00 0.00 0.00 4.35
7742 9357 1.476085 CTCTCTCAGCCAGTTCGTGAT 59.524 52.381 0.00 0.00 0.00 3.06
7743 9358 1.895798 TCTCTCAGCCAGTTCGTGATT 59.104 47.619 0.00 0.00 0.00 2.57
7744 9359 2.094494 TCTCTCAGCCAGTTCGTGATTC 60.094 50.000 0.00 0.00 0.00 2.52
7745 9360 1.618343 TCTCAGCCAGTTCGTGATTCA 59.382 47.619 0.00 0.00 0.00 2.57
7746 9361 1.728971 CTCAGCCAGTTCGTGATTCAC 59.271 52.381 6.73 6.73 0.00 3.18
7747 9362 1.344438 TCAGCCAGTTCGTGATTCACT 59.656 47.619 14.54 0.00 31.34 3.41
7748 9363 2.146342 CAGCCAGTTCGTGATTCACTT 58.854 47.619 14.54 0.00 31.34 3.16
7749 9364 2.549754 CAGCCAGTTCGTGATTCACTTT 59.450 45.455 14.54 0.00 31.34 2.66
7750 9365 2.808543 AGCCAGTTCGTGATTCACTTTC 59.191 45.455 14.54 4.91 31.34 2.62
7751 9366 2.808543 GCCAGTTCGTGATTCACTTTCT 59.191 45.455 14.54 6.89 31.34 2.52
7752 9367 3.120511 GCCAGTTCGTGATTCACTTTCTC 60.121 47.826 14.54 1.81 31.34 2.87
7753 9368 3.121944 CCAGTTCGTGATTCACTTTCTCG 59.878 47.826 14.54 0.85 31.34 4.04
7754 9369 3.981416 CAGTTCGTGATTCACTTTCTCGA 59.019 43.478 14.54 3.24 37.34 4.04
7755 9370 4.623167 CAGTTCGTGATTCACTTTCTCGAT 59.377 41.667 14.54 0.00 38.44 3.59
7756 9371 4.623167 AGTTCGTGATTCACTTTCTCGATG 59.377 41.667 14.54 0.00 38.44 3.84
7757 9372 4.434713 TCGTGATTCACTTTCTCGATGA 57.565 40.909 14.54 0.00 35.09 2.92
7758 9373 4.998788 TCGTGATTCACTTTCTCGATGAT 58.001 39.130 14.54 0.00 35.09 2.45
7759 9374 5.037385 TCGTGATTCACTTTCTCGATGATC 58.963 41.667 14.54 0.00 35.09 2.92
7760 9375 4.208047 CGTGATTCACTTTCTCGATGATCC 59.792 45.833 14.54 0.00 33.27 3.36
7761 9376 5.111989 GTGATTCACTTTCTCGATGATCCA 58.888 41.667 9.59 0.00 0.00 3.41
7762 9377 5.006165 GTGATTCACTTTCTCGATGATCCAC 59.994 44.000 9.59 0.00 0.00 4.02
7763 9378 4.535526 TTCACTTTCTCGATGATCCACA 57.464 40.909 0.00 0.00 0.00 4.17
7764 9379 3.849911 TCACTTTCTCGATGATCCACAC 58.150 45.455 0.00 0.00 0.00 3.82
7765 9380 3.511540 TCACTTTCTCGATGATCCACACT 59.488 43.478 0.00 0.00 0.00 3.55
7766 9381 4.021104 TCACTTTCTCGATGATCCACACTT 60.021 41.667 0.00 0.00 0.00 3.16
7767 9382 5.185056 TCACTTTCTCGATGATCCACACTTA 59.815 40.000 0.00 0.00 0.00 2.24
7768 9383 5.289675 CACTTTCTCGATGATCCACACTTAC 59.710 44.000 0.00 0.00 0.00 2.34
7769 9384 5.047306 ACTTTCTCGATGATCCACACTTACA 60.047 40.000 0.00 0.00 0.00 2.41
7770 9385 4.639135 TCTCGATGATCCACACTTACAG 57.361 45.455 0.00 0.00 0.00 2.74
7771 9386 3.381590 TCTCGATGATCCACACTTACAGG 59.618 47.826 0.00 0.00 0.00 4.00
7772 9387 3.361786 TCGATGATCCACACTTACAGGA 58.638 45.455 0.00 0.00 35.59 3.86
7773 9388 3.130516 TCGATGATCCACACTTACAGGAC 59.869 47.826 0.00 0.00 33.57 3.85
7774 9389 3.131223 CGATGATCCACACTTACAGGACT 59.869 47.826 0.00 0.00 33.57 3.85
7775 9390 4.688021 GATGATCCACACTTACAGGACTC 58.312 47.826 0.00 0.00 33.57 3.36
7776 9391 3.779444 TGATCCACACTTACAGGACTCT 58.221 45.455 0.00 0.00 33.57 3.24
7777 9392 3.511540 TGATCCACACTTACAGGACTCTG 59.488 47.826 0.00 0.00 46.10 3.35
7778 9393 2.248248 TCCACACTTACAGGACTCTGG 58.752 52.381 0.00 0.00 44.99 3.86
7779 9394 1.338200 CCACACTTACAGGACTCTGGC 60.338 57.143 0.00 0.00 44.99 4.85
7780 9395 0.977395 ACACTTACAGGACTCTGGCC 59.023 55.000 0.00 0.00 44.99 5.36
7781 9396 1.270907 CACTTACAGGACTCTGGCCT 58.729 55.000 3.32 0.00 44.99 5.19
7782 9397 2.225293 ACACTTACAGGACTCTGGCCTA 60.225 50.000 3.32 0.00 44.99 3.93
7783 9398 2.428890 CACTTACAGGACTCTGGCCTAG 59.571 54.545 3.32 3.93 44.99 3.02
7784 9399 2.043252 ACTTACAGGACTCTGGCCTAGT 59.957 50.000 10.67 10.67 44.99 2.57
7785 9400 2.921834 TACAGGACTCTGGCCTAGTT 57.078 50.000 3.32 0.00 44.99 2.24
7786 9401 2.921834 ACAGGACTCTGGCCTAGTTA 57.078 50.000 3.32 0.00 44.99 2.24
7787 9402 3.406512 ACAGGACTCTGGCCTAGTTAT 57.593 47.619 3.32 0.00 44.99 1.89
7788 9403 4.537945 ACAGGACTCTGGCCTAGTTATA 57.462 45.455 3.32 0.00 44.99 0.98
7789 9404 4.216708 ACAGGACTCTGGCCTAGTTATAC 58.783 47.826 3.32 0.69 44.99 1.47
7790 9405 4.215908 CAGGACTCTGGCCTAGTTATACA 58.784 47.826 3.32 0.00 37.36 2.29
7791 9406 4.038162 CAGGACTCTGGCCTAGTTATACAC 59.962 50.000 3.32 0.00 37.36 2.90
7792 9407 3.958798 GGACTCTGGCCTAGTTATACACA 59.041 47.826 3.32 0.00 0.00 3.72
7793 9408 4.404715 GGACTCTGGCCTAGTTATACACAA 59.595 45.833 3.32 0.00 0.00 3.33
7794 9409 5.105064 GGACTCTGGCCTAGTTATACACAAA 60.105 44.000 3.32 0.00 0.00 2.83
7795 9410 6.408206 GGACTCTGGCCTAGTTATACACAAAT 60.408 42.308 3.32 0.00 0.00 2.32
7796 9411 6.349300 ACTCTGGCCTAGTTATACACAAATG 58.651 40.000 3.32 0.00 0.00 2.32
7797 9412 6.156256 ACTCTGGCCTAGTTATACACAAATGA 59.844 38.462 3.32 0.00 0.00 2.57
7798 9413 6.582636 TCTGGCCTAGTTATACACAAATGAG 58.417 40.000 3.32 0.00 0.00 2.90
7799 9414 6.156256 TCTGGCCTAGTTATACACAAATGAGT 59.844 38.462 3.32 0.00 0.00 3.41
7800 9415 7.343574 TCTGGCCTAGTTATACACAAATGAGTA 59.656 37.037 3.32 0.00 0.00 2.59
7801 9416 7.497595 TGGCCTAGTTATACACAAATGAGTAG 58.502 38.462 3.32 0.00 0.00 2.57
7802 9417 7.343574 TGGCCTAGTTATACACAAATGAGTAGA 59.656 37.037 3.32 0.00 0.00 2.59
7803 9418 7.868415 GGCCTAGTTATACACAAATGAGTAGAG 59.132 40.741 0.00 0.00 0.00 2.43
7804 9419 7.382759 GCCTAGTTATACACAAATGAGTAGAGC 59.617 40.741 0.00 0.00 0.00 4.09
7805 9420 8.414003 CCTAGTTATACACAAATGAGTAGAGCA 58.586 37.037 3.37 0.00 0.00 4.26
7806 9421 9.239002 CTAGTTATACACAAATGAGTAGAGCAC 57.761 37.037 3.37 0.00 0.00 4.40
7807 9422 6.752351 AGTTATACACAAATGAGTAGAGCACG 59.248 38.462 3.37 0.00 0.00 5.34
7808 9423 2.069273 ACACAAATGAGTAGAGCACGC 58.931 47.619 0.00 0.00 0.00 5.34
7809 9424 2.068519 CACAAATGAGTAGAGCACGCA 58.931 47.619 0.00 0.00 41.47 5.24
7810 9425 2.093310 CACAAATGAGTAGAGCACGCAG 59.907 50.000 0.00 0.00 40.50 5.18
7811 9426 1.662629 CAAATGAGTAGAGCACGCAGG 59.337 52.381 0.00 0.00 40.50 4.85
7812 9427 0.460987 AATGAGTAGAGCACGCAGGC 60.461 55.000 0.00 0.00 40.50 4.85
7813 9428 2.202810 GAGTAGAGCACGCAGGCC 60.203 66.667 0.00 0.00 0.00 5.19
7814 9429 3.724914 GAGTAGAGCACGCAGGCCC 62.725 68.421 0.00 0.00 0.00 5.80
7815 9430 3.775654 GTAGAGCACGCAGGCCCT 61.776 66.667 0.00 0.00 0.00 5.19
7816 9431 3.774528 TAGAGCACGCAGGCCCTG 61.775 66.667 6.32 6.32 34.12 4.45
7821 9436 4.680237 CACGCAGGCCCTGTTCGA 62.680 66.667 16.23 0.00 33.43 3.71
7822 9437 4.379243 ACGCAGGCCCTGTTCGAG 62.379 66.667 16.23 4.65 33.43 4.04
7824 9439 4.704833 GCAGGCCCTGTTCGAGCA 62.705 66.667 13.35 0.88 33.43 4.26
7825 9440 2.743928 CAGGCCCTGTTCGAGCAC 60.744 66.667 1.39 0.00 0.00 4.40
7826 9441 4.379243 AGGCCCTGTTCGAGCACG 62.379 66.667 0.00 0.00 41.26 5.34
7831 9446 4.680237 CTGTTCGAGCACGGCCCA 62.680 66.667 3.11 0.00 40.21 5.36
7832 9447 4.243008 TGTTCGAGCACGGCCCAA 62.243 61.111 3.11 0.00 40.21 4.12
7833 9448 3.723348 GTTCGAGCACGGCCCAAC 61.723 66.667 3.11 0.00 40.21 3.77
7834 9449 3.936203 TTCGAGCACGGCCCAACT 61.936 61.111 3.11 0.00 40.21 3.16
7835 9450 4.680237 TCGAGCACGGCCCAACTG 62.680 66.667 3.11 0.00 40.21 3.16
7844 9459 2.439156 GCCCAACTGCAGGCCTAG 60.439 66.667 19.93 1.97 43.76 3.02
7845 9460 3.081554 CCCAACTGCAGGCCTAGT 58.918 61.111 19.93 2.82 0.00 2.57
7846 9461 1.078143 CCCAACTGCAGGCCTAGTC 60.078 63.158 19.93 0.00 0.00 2.59
7847 9462 1.448540 CCAACTGCAGGCCTAGTCG 60.449 63.158 19.93 0.00 0.00 4.18
7848 9463 1.448540 CAACTGCAGGCCTAGTCGG 60.449 63.158 19.93 5.46 0.00 4.79
7866 9481 4.831307 CGACGCGCCGCTAGTCTT 62.831 66.667 5.73 0.00 33.10 3.01
7867 9482 2.950194 GACGCGCCGCTAGTCTTC 60.950 66.667 5.73 0.00 32.58 2.87
7868 9483 3.398353 GACGCGCCGCTAGTCTTCT 62.398 63.158 5.73 0.00 32.58 2.85
7869 9484 2.202623 CGCGCCGCTAGTCTTCTT 60.203 61.111 7.78 0.00 0.00 2.52
7870 9485 1.063649 CGCGCCGCTAGTCTTCTTA 59.936 57.895 7.78 0.00 0.00 2.10
7871 9486 0.930742 CGCGCCGCTAGTCTTCTTAG 60.931 60.000 7.78 0.00 0.00 2.18
7872 9487 1.209910 GCGCCGCTAGTCTTCTTAGC 61.210 60.000 0.00 0.00 0.00 3.09
7873 9488 0.100682 CGCCGCTAGTCTTCTTAGCA 59.899 55.000 5.27 0.00 36.69 3.49
7874 9489 1.562017 GCCGCTAGTCTTCTTAGCAC 58.438 55.000 5.27 0.00 36.69 4.40
7875 9490 1.135333 GCCGCTAGTCTTCTTAGCACT 59.865 52.381 5.27 0.00 36.69 4.40
7876 9491 2.417515 GCCGCTAGTCTTCTTAGCACTT 60.418 50.000 5.27 0.00 36.69 3.16
7877 9492 3.440228 CCGCTAGTCTTCTTAGCACTTC 58.560 50.000 5.27 0.00 36.69 3.01
7878 9493 3.129638 CCGCTAGTCTTCTTAGCACTTCT 59.870 47.826 5.27 0.00 36.69 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.155442 TGATTCTACTAATCAGAGAGGAGGA 57.845 40.000 0.00 0.00 33.20 3.71
11 12 5.816955 AAGAGGCCCTGATTCTACTAATC 57.183 43.478 0.00 0.00 0.00 1.75
12 13 5.667626 TCAAAGAGGCCCTGATTCTACTAAT 59.332 40.000 0.00 0.00 0.00 1.73
13 14 5.030147 TCAAAGAGGCCCTGATTCTACTAA 58.970 41.667 0.00 0.00 0.00 2.24
14 15 4.620723 TCAAAGAGGCCCTGATTCTACTA 58.379 43.478 0.00 0.00 0.00 1.82
15 16 3.454858 TCAAAGAGGCCCTGATTCTACT 58.545 45.455 0.00 0.00 0.00 2.57
16 17 3.914426 TCAAAGAGGCCCTGATTCTAC 57.086 47.619 0.00 0.00 0.00 2.59
17 18 4.443457 CGAATCAAAGAGGCCCTGATTCTA 60.443 45.833 27.65 4.79 46.98 2.10
18 19 3.683847 CGAATCAAAGAGGCCCTGATTCT 60.684 47.826 27.65 13.44 46.98 2.40
19 20 2.615912 CGAATCAAAGAGGCCCTGATTC 59.384 50.000 24.30 24.30 46.26 2.52
20 21 2.648059 CGAATCAAAGAGGCCCTGATT 58.352 47.619 15.93 15.93 41.37 2.57
21 22 1.748591 GCGAATCAAAGAGGCCCTGAT 60.749 52.381 0.00 0.00 0.00 2.90
22 23 0.392998 GCGAATCAAAGAGGCCCTGA 60.393 55.000 0.00 0.00 0.00 3.86
23 24 0.677731 TGCGAATCAAAGAGGCCCTG 60.678 55.000 0.00 0.00 0.00 4.45
108 109 6.259608 CGCTATCAAACATTCTTTGAGATCCT 59.740 38.462 2.29 0.00 41.13 3.24
143 144 7.066781 TCAAACCTCTTTGTAGGATTCCTTTT 58.933 34.615 11.25 0.00 39.15 2.27
229 230 4.552767 CGTTTGATTCGTAGGATTGGCATC 60.553 45.833 0.00 0.00 0.00 3.91
278 279 9.713684 TGTATAGGATTTTTGGAGGATTTGAAT 57.286 29.630 0.00 0.00 0.00 2.57
279 280 9.540538 TTGTATAGGATTTTTGGAGGATTTGAA 57.459 29.630 0.00 0.00 0.00 2.69
280 281 9.713684 ATTGTATAGGATTTTTGGAGGATTTGA 57.286 29.630 0.00 0.00 0.00 2.69
283 284 9.147732 GGAATTGTATAGGATTTTTGGAGGATT 57.852 33.333 0.00 0.00 0.00 3.01
284 285 8.514504 AGGAATTGTATAGGATTTTTGGAGGAT 58.485 33.333 0.00 0.00 0.00 3.24
285 286 7.882755 AGGAATTGTATAGGATTTTTGGAGGA 58.117 34.615 0.00 0.00 0.00 3.71
286 287 8.539117 AAGGAATTGTATAGGATTTTTGGAGG 57.461 34.615 0.00 0.00 0.00 4.30
287 288 9.807649 CAAAGGAATTGTATAGGATTTTTGGAG 57.192 33.333 0.00 0.00 34.16 3.86
288 289 9.540538 TCAAAGGAATTGTATAGGATTTTTGGA 57.459 29.630 0.00 0.00 40.11 3.53
309 310 5.982890 TTGAGGGCTCCTTTAATTCAAAG 57.017 39.130 0.00 0.00 42.90 2.77
310 311 5.125417 CGATTGAGGGCTCCTTTAATTCAAA 59.875 40.000 0.00 0.00 31.76 2.69
311 312 4.640201 CGATTGAGGGCTCCTTTAATTCAA 59.360 41.667 0.00 0.00 31.76 2.69
312 313 4.199310 CGATTGAGGGCTCCTTTAATTCA 58.801 43.478 0.00 0.00 31.76 2.57
313 314 3.565902 CCGATTGAGGGCTCCTTTAATTC 59.434 47.826 0.00 0.00 31.76 2.17
314 315 3.053619 ACCGATTGAGGGCTCCTTTAATT 60.054 43.478 0.00 0.00 31.76 1.40
315 316 2.509964 ACCGATTGAGGGCTCCTTTAAT 59.490 45.455 0.00 1.09 31.76 1.40
316 317 1.913419 ACCGATTGAGGGCTCCTTTAA 59.087 47.619 0.00 0.00 31.76 1.52
317 318 1.209504 CACCGATTGAGGGCTCCTTTA 59.790 52.381 0.00 0.00 31.76 1.85
318 319 0.035056 CACCGATTGAGGGCTCCTTT 60.035 55.000 0.00 0.00 31.76 3.11
319 320 1.604378 CACCGATTGAGGGCTCCTT 59.396 57.895 0.00 0.00 31.76 3.36
320 321 2.370445 CCACCGATTGAGGGCTCCT 61.370 63.158 0.00 0.00 36.03 3.69
321 322 2.190578 CCACCGATTGAGGGCTCC 59.809 66.667 0.00 0.00 35.02 4.70
322 323 1.144936 CTCCACCGATTGAGGGCTC 59.855 63.158 0.00 0.00 35.02 4.70
323 324 2.370445 CCTCCACCGATTGAGGGCT 61.370 63.158 0.00 0.00 43.69 5.19
324 325 2.190578 CCTCCACCGATTGAGGGC 59.809 66.667 0.00 0.00 43.69 5.19
325 326 1.690219 CCTCCTCCACCGATTGAGGG 61.690 65.000 0.00 0.00 46.71 4.30
327 328 0.749649 CTCCTCCTCCACCGATTGAG 59.250 60.000 0.00 0.00 0.00 3.02
328 329 0.687757 CCTCCTCCTCCACCGATTGA 60.688 60.000 0.00 0.00 0.00 2.57
329 330 1.690219 CCCTCCTCCTCCACCGATTG 61.690 65.000 0.00 0.00 0.00 2.67
330 331 1.383248 CCCTCCTCCTCCACCGATT 60.383 63.158 0.00 0.00 0.00 3.34
331 332 1.886730 TTCCCTCCTCCTCCACCGAT 61.887 60.000 0.00 0.00 0.00 4.18
332 333 2.101801 TTTCCCTCCTCCTCCACCGA 62.102 60.000 0.00 0.00 0.00 4.69
333 334 1.198759 TTTTCCCTCCTCCTCCACCG 61.199 60.000 0.00 0.00 0.00 4.94
334 335 0.621082 CTTTTCCCTCCTCCTCCACC 59.379 60.000 0.00 0.00 0.00 4.61
335 336 0.621082 CCTTTTCCCTCCTCCTCCAC 59.379 60.000 0.00 0.00 0.00 4.02
336 337 0.496382 TCCTTTTCCCTCCTCCTCCA 59.504 55.000 0.00 0.00 0.00 3.86
337 338 1.670059 TTCCTTTTCCCTCCTCCTCC 58.330 55.000 0.00 0.00 0.00 4.30
338 339 3.682999 CGATTTCCTTTTCCCTCCTCCTC 60.683 52.174 0.00 0.00 0.00 3.71
339 340 2.239907 CGATTTCCTTTTCCCTCCTCCT 59.760 50.000 0.00 0.00 0.00 3.69
340 341 2.026169 ACGATTTCCTTTTCCCTCCTCC 60.026 50.000 0.00 0.00 0.00 4.30
341 342 3.271729 GACGATTTCCTTTTCCCTCCTC 58.728 50.000 0.00 0.00 0.00 3.71
342 343 2.026169 GGACGATTTCCTTTTCCCTCCT 60.026 50.000 0.00 0.00 41.95 3.69
367 368 1.349234 GAATTGATTGGTGCCGCAAC 58.651 50.000 0.00 0.00 0.00 4.17
433 434 5.402398 ACTAGCTTGCATTTCCGAATTTTC 58.598 37.500 0.00 0.00 0.00 2.29
438 441 4.518970 AGAAAACTAGCTTGCATTTCCGAA 59.481 37.500 17.27 0.00 31.91 4.30
467 480 4.843331 TGATGCCCTCCCCTCCCC 62.843 72.222 0.00 0.00 0.00 4.81
558 583 4.559063 CCAGCCCAGCCCATCTCG 62.559 72.222 0.00 0.00 0.00 4.04
601 650 2.482374 GACTGGCGAGCACATTGC 59.518 61.111 0.00 0.00 45.46 3.56
602 651 1.672030 TGGACTGGCGAGCACATTG 60.672 57.895 0.00 0.00 0.00 2.82
603 652 1.672356 GTGGACTGGCGAGCACATT 60.672 57.895 0.00 0.00 0.00 2.71
674 724 1.228552 CCAAGGGGTTGGAGGTGTG 60.229 63.158 0.00 0.00 44.82 3.82
688 738 2.408271 TGCTGAGCTATCCAACCAAG 57.592 50.000 5.83 0.00 0.00 3.61
726 776 0.323957 GTCGGTAGGGGTTCAAGCTT 59.676 55.000 0.00 0.00 0.00 3.74
730 780 1.345415 GAAGTGTCGGTAGGGGTTCAA 59.655 52.381 0.00 0.00 0.00 2.69
731 781 0.971386 GAAGTGTCGGTAGGGGTTCA 59.029 55.000 0.00 0.00 0.00 3.18
732 782 1.264295 AGAAGTGTCGGTAGGGGTTC 58.736 55.000 0.00 0.00 0.00 3.62
816 872 4.188511 GTAGGGGAGGGGGAGGGG 62.189 77.778 0.00 0.00 0.00 4.79
817 873 2.285634 AATGTAGGGGAGGGGGAGGG 62.286 65.000 0.00 0.00 0.00 4.30
818 874 0.768609 GAATGTAGGGGAGGGGGAGG 60.769 65.000 0.00 0.00 0.00 4.30
819 875 0.030092 TGAATGTAGGGGAGGGGGAG 60.030 60.000 0.00 0.00 0.00 4.30
820 876 0.653397 ATGAATGTAGGGGAGGGGGA 59.347 55.000 0.00 0.00 0.00 4.81
821 877 1.425448 GAATGAATGTAGGGGAGGGGG 59.575 57.143 0.00 0.00 0.00 5.40
858 923 1.386533 CTTTAGCATGTGCAGGGAGG 58.613 55.000 7.83 0.00 45.16 4.30
907 987 2.124529 GAGGGCAGGCAAGGTAGC 60.125 66.667 0.00 0.00 0.00 3.58
911 991 4.437587 CAGGGAGGGCAGGCAAGG 62.438 72.222 0.00 0.00 0.00 3.61
919 999 2.037847 AACAATGGCAGGGAGGGC 59.962 61.111 0.00 0.00 0.00 5.19
920 1000 1.683365 CCAACAATGGCAGGGAGGG 60.683 63.158 0.00 0.00 40.58 4.30
949 1029 1.560505 TACGACAAGGGGAGGTTACC 58.439 55.000 0.00 0.00 0.00 2.85
950 1030 3.593096 CTTTACGACAAGGGGAGGTTAC 58.407 50.000 0.00 0.00 0.00 2.50
951 1031 2.568509 CCTTTACGACAAGGGGAGGTTA 59.431 50.000 8.92 0.00 39.95 2.85
952 1032 1.350019 CCTTTACGACAAGGGGAGGTT 59.650 52.381 8.92 0.00 39.95 3.50
953 1033 0.981943 CCTTTACGACAAGGGGAGGT 59.018 55.000 8.92 0.00 39.95 3.85
954 1034 1.207329 CTCCTTTACGACAAGGGGAGG 59.793 57.143 10.72 0.00 46.45 4.30
955 1035 2.176889 TCTCCTTTACGACAAGGGGAG 58.823 52.381 13.88 13.73 46.92 4.30
957 1037 1.900486 ACTCTCCTTTACGACAAGGGG 59.100 52.381 14.78 12.55 45.03 4.79
958 1038 2.931320 GCACTCTCCTTTACGACAAGGG 60.931 54.545 14.78 6.88 43.40 3.95
985 1069 2.202797 CATGGGCGTCGTCCTCAG 60.203 66.667 18.28 2.85 0.00 3.35
1308 1392 1.307647 GTACCGGTAGGGGTGGAGA 59.692 63.158 16.41 0.00 41.41 3.71
1950 2077 7.663493 GCAGATATAGGGAGTTTAGAGCATTTT 59.337 37.037 0.00 0.00 0.00 1.82
1952 2079 6.573289 CGCAGATATAGGGAGTTTAGAGCATT 60.573 42.308 0.00 0.00 0.00 3.56
2044 2176 9.809096 TCATTTTAGACTTGTTGTGCAAAATAA 57.191 25.926 0.00 0.00 36.53 1.40
2046 2178 8.891671 ATCATTTTAGACTTGTTGTGCAAAAT 57.108 26.923 0.00 0.00 36.53 1.82
2096 2229 7.767659 TCAAGATCAAATAATCCTGACTGTCAG 59.232 37.037 26.94 26.94 43.91 3.51
2140 2273 3.387374 TCCTAGGACTAGTACCAGTCTCG 59.613 52.174 18.93 9.01 43.73 4.04
2141 2274 4.707105 GTCCTAGGACTAGTACCAGTCTC 58.293 52.174 31.12 10.53 43.73 3.36
2154 2296 0.739561 CACGCTACCAGTCCTAGGAC 59.260 60.000 31.29 31.29 44.86 3.85
2165 2307 2.181021 CGACCAGACCACGCTACC 59.819 66.667 0.00 0.00 0.00 3.18
2169 2311 2.424705 TAACACCGACCAGACCACGC 62.425 60.000 0.00 0.00 0.00 5.34
2170 2312 0.032403 TTAACACCGACCAGACCACG 59.968 55.000 0.00 0.00 0.00 4.94
2171 2313 2.289195 TGATTAACACCGACCAGACCAC 60.289 50.000 0.00 0.00 0.00 4.16
2221 2377 7.393234 TCTCGGACTTGTCAAATTTTAATCCAT 59.607 33.333 3.08 0.00 0.00 3.41
2352 2508 7.635423 CAGCAGTGACTATGACTAGTAGTAAG 58.365 42.308 1.88 4.23 38.33 2.34
2498 2668 0.038890 TTGCAACCGAATCCATCCCA 59.961 50.000 0.00 0.00 0.00 4.37
2502 2672 0.461135 GCCATTGCAACCGAATCCAT 59.539 50.000 0.00 0.00 37.47 3.41
2519 2689 1.416401 TCACCTCGGATTCCTATTGCC 59.584 52.381 0.30 0.00 0.00 4.52
2542 2712 1.202627 GCCCACTGTCATCTCATCTCC 60.203 57.143 0.00 0.00 0.00 3.71
2550 2720 0.682209 AAGCCATGCCCACTGTCATC 60.682 55.000 0.00 0.00 0.00 2.92
2551 2721 0.968901 CAAGCCATGCCCACTGTCAT 60.969 55.000 0.00 0.00 0.00 3.06
2552 2722 1.604308 CAAGCCATGCCCACTGTCA 60.604 57.895 0.00 0.00 0.00 3.58
2553 2723 3.281240 CAAGCCATGCCCACTGTC 58.719 61.111 0.00 0.00 0.00 3.51
2642 2812 4.778427 TGTCCCAACCCAAAAAGTTTAACT 59.222 37.500 0.00 0.00 0.00 2.24
2654 2824 4.957606 ATTTATACCTTGTCCCAACCCA 57.042 40.909 0.00 0.00 0.00 4.51
2748 3130 9.407380 AGCATCATCCATCTATAACTAGACTAG 57.593 37.037 8.00 8.00 36.81 2.57
2750 3132 9.184523 GTAGCATCATCCATCTATAACTAGACT 57.815 37.037 0.00 0.00 36.81 3.24
2751 3133 8.410141 GGTAGCATCATCCATCTATAACTAGAC 58.590 40.741 0.00 0.00 36.81 2.59
2777 3163 1.096386 ACGTACTAGAGGCTCCAGCG 61.096 60.000 11.71 9.48 43.26 5.18
2788 3174 6.183359 CGGCTGAAGAAAAACTAACGTACTAG 60.183 42.308 0.00 0.00 0.00 2.57
2805 3191 5.154222 GTTTTCTCCATAAAACGGCTGAAG 58.846 41.667 0.00 0.00 38.98 3.02
2851 3239 5.860941 TCTCCTCCTTTCTATGACATGAC 57.139 43.478 0.00 0.00 0.00 3.06
2854 3242 4.718774 TGCTTCTCCTCCTTTCTATGACAT 59.281 41.667 0.00 0.00 0.00 3.06
2884 3272 2.525784 TGGCAATGGCACCACTTTT 58.474 47.368 5.05 0.00 43.71 2.27
2885 3273 4.291815 TGGCAATGGCACCACTTT 57.708 50.000 5.05 0.00 43.71 2.66
2892 3280 3.682885 CAAGCGGTGGCAATGGCA 61.683 61.111 5.05 5.05 43.71 4.92
2893 3281 2.229690 ATTCAAGCGGTGGCAATGGC 62.230 55.000 0.00 0.00 43.41 4.40
2894 3282 0.458889 CATTCAAGCGGTGGCAATGG 60.459 55.000 0.00 0.00 43.41 3.16
2895 3283 1.079875 GCATTCAAGCGGTGGCAATG 61.080 55.000 8.38 8.38 43.41 2.82
2896 3284 1.216178 GCATTCAAGCGGTGGCAAT 59.784 52.632 0.00 0.00 43.41 3.56
2897 3285 2.650196 GCATTCAAGCGGTGGCAA 59.350 55.556 0.00 0.00 43.41 4.52
2976 3366 4.712763 CGCATTTCTTCTGAGTTGTAACC 58.287 43.478 0.00 0.00 0.00 2.85
3172 3983 9.765795 TTCTCGTTATTTTCTTCTTCTTCTTCT 57.234 29.630 0.00 0.00 0.00 2.85
3221 4037 3.499737 GTGGTGCCGCTGGATTCG 61.500 66.667 0.00 0.00 0.00 3.34
3260 4076 3.733960 CTCACCCGTCGTGCGAGA 61.734 66.667 0.00 0.00 44.77 4.04
3265 4081 3.760035 CCTCCCTCACCCGTCGTG 61.760 72.222 0.00 0.00 44.50 4.35
3503 4381 3.134127 GGAGGGAACATGCGCCAC 61.134 66.667 4.18 0.00 0.00 5.01
3556 4451 9.893305 CTTGTGGGAGTAGTAAAGTAAAAATTG 57.107 33.333 0.00 0.00 0.00 2.32
3557 4452 9.856162 TCTTGTGGGAGTAGTAAAGTAAAAATT 57.144 29.630 0.00 0.00 0.00 1.82
3564 4459 5.601313 TCAGTTCTTGTGGGAGTAGTAAAGT 59.399 40.000 0.00 0.00 0.00 2.66
3565 4460 6.097915 TCAGTTCTTGTGGGAGTAGTAAAG 57.902 41.667 0.00 0.00 0.00 1.85
3566 4461 6.269077 TCATCAGTTCTTGTGGGAGTAGTAAA 59.731 38.462 0.00 0.00 0.00 2.01
3567 4462 5.778241 TCATCAGTTCTTGTGGGAGTAGTAA 59.222 40.000 0.00 0.00 0.00 2.24
3570 4465 4.808414 TCATCAGTTCTTGTGGGAGTAG 57.192 45.455 0.00 0.00 0.00 2.57
3573 4468 4.212143 TCATCATCAGTTCTTGTGGGAG 57.788 45.455 0.00 0.00 0.00 4.30
3574 4469 4.042062 AGTTCATCATCAGTTCTTGTGGGA 59.958 41.667 0.00 0.00 0.00 4.37
3575 4470 4.155462 CAGTTCATCATCAGTTCTTGTGGG 59.845 45.833 0.00 0.00 0.00 4.61
3576 4471 4.758674 ACAGTTCATCATCAGTTCTTGTGG 59.241 41.667 0.00 0.00 0.00 4.17
3577 4472 5.936686 ACAGTTCATCATCAGTTCTTGTG 57.063 39.130 0.00 0.00 0.00 3.33
3578 4473 7.172190 CAGTTACAGTTCATCATCAGTTCTTGT 59.828 37.037 0.00 0.00 0.00 3.16
3579 4474 7.386025 TCAGTTACAGTTCATCATCAGTTCTTG 59.614 37.037 0.00 0.00 0.00 3.02
3580 4475 7.386299 GTCAGTTACAGTTCATCATCAGTTCTT 59.614 37.037 0.00 0.00 0.00 2.52
3581 4476 6.870965 GTCAGTTACAGTTCATCATCAGTTCT 59.129 38.462 0.00 0.00 0.00 3.01
3582 4477 6.183360 CGTCAGTTACAGTTCATCATCAGTTC 60.183 42.308 0.00 0.00 0.00 3.01
3583 4478 5.635280 CGTCAGTTACAGTTCATCATCAGTT 59.365 40.000 0.00 0.00 0.00 3.16
3584 4479 5.164233 CGTCAGTTACAGTTCATCATCAGT 58.836 41.667 0.00 0.00 0.00 3.41
3585 4480 4.564372 CCGTCAGTTACAGTTCATCATCAG 59.436 45.833 0.00 0.00 0.00 2.90
3650 4545 1.817099 CAGGGTGAAGGCGATCAGC 60.817 63.158 14.49 14.49 44.92 4.26
3653 4548 1.084370 CGAACAGGGTGAAGGCGATC 61.084 60.000 0.00 0.00 0.00 3.69
3776 4671 2.037847 ATGGGGTTCAGCTTGGGC 59.962 61.111 0.00 0.00 39.06 5.36
3929 4824 2.279120 GCGAGGATGGAGAGCACG 60.279 66.667 0.00 0.00 0.00 5.34
4025 4920 1.446272 GGCGAACTTGGAGGACTCG 60.446 63.158 0.00 0.00 0.00 4.18
4202 5097 0.957395 CGTGCTCCAGGCTGTTGATT 60.957 55.000 14.43 0.00 42.39 2.57
4220 5115 1.510623 GTTGCGCTGCTTGATGTCG 60.511 57.895 9.73 0.00 0.00 4.35
4328 5223 3.379445 TGGTTCTCGGAGGCGTCC 61.379 66.667 15.66 15.66 39.88 4.79
4388 5283 8.222637 TGGTAGTCCTAGTGATAAGTATAGCAA 58.777 37.037 0.00 0.00 34.23 3.91
4389 5284 7.752638 TGGTAGTCCTAGTGATAAGTATAGCA 58.247 38.462 0.00 0.00 34.23 3.49
4390 5285 8.810990 ATGGTAGTCCTAGTGATAAGTATAGC 57.189 38.462 0.00 0.00 34.23 2.97
4395 5290 9.490083 AAGTAAATGGTAGTCCTAGTGATAAGT 57.510 33.333 0.00 0.00 34.23 2.24
4406 5301 5.898397 AGAGACCCTAAGTAAATGGTAGTCC 59.102 44.000 0.00 0.00 0.00 3.85
4407 5302 7.421087 AAGAGACCCTAAGTAAATGGTAGTC 57.579 40.000 0.00 0.00 0.00 2.59
4423 5318 1.737008 GCACGGACGAAAGAGACCC 60.737 63.158 0.00 0.00 0.00 4.46
4424 5319 0.389948 ATGCACGGACGAAAGAGACC 60.390 55.000 0.00 0.00 0.00 3.85
4425 5320 0.716108 CATGCACGGACGAAAGAGAC 59.284 55.000 0.00 0.00 0.00 3.36
4426 5321 0.601057 TCATGCACGGACGAAAGAGA 59.399 50.000 0.00 0.00 0.00 3.10
4427 5322 1.325640 CATCATGCACGGACGAAAGAG 59.674 52.381 0.00 0.00 0.00 2.85
4428 5323 1.358877 CATCATGCACGGACGAAAGA 58.641 50.000 0.00 0.00 0.00 2.52
4531 5770 1.376424 CTTGGATCGGCACAGCAGT 60.376 57.895 0.00 0.00 0.00 4.40
4532 5771 2.110967 CCTTGGATCGGCACAGCAG 61.111 63.158 0.00 0.00 0.00 4.24
4533 5772 2.046023 CCTTGGATCGGCACAGCA 60.046 61.111 0.00 0.00 0.00 4.41
4534 5773 2.825836 CCCTTGGATCGGCACAGC 60.826 66.667 0.00 0.00 0.00 4.40
4535 5774 1.153289 CTCCCTTGGATCGGCACAG 60.153 63.158 0.00 0.00 0.00 3.66
4579 5818 1.668151 GGTGGTTGCACTCTCGACC 60.668 63.158 0.00 0.00 40.28 4.79
4662 5901 3.535629 TTGCTGGCCACAGGACGAG 62.536 63.158 0.00 0.00 45.25 4.18
4697 5937 0.109086 ATTCCTCGTCACAGCGTGAG 60.109 55.000 10.88 6.69 43.57 3.51
4701 5941 1.079819 ACCATTCCTCGTCACAGCG 60.080 57.895 0.00 0.00 0.00 5.18
4825 6068 3.883489 AGAGTTGGGCAGAGTAAACAAAC 59.117 43.478 0.00 0.00 0.00 2.93
4826 6069 4.164843 AGAGTTGGGCAGAGTAAACAAA 57.835 40.909 0.00 0.00 0.00 2.83
4827 6070 3.857157 AGAGTTGGGCAGAGTAAACAA 57.143 42.857 0.00 0.00 0.00 2.83
4828 6071 3.857157 AAGAGTTGGGCAGAGTAAACA 57.143 42.857 0.00 0.00 0.00 2.83
4963 6216 5.800941 AGCTGTTACTTTTACTTCTCGATCG 59.199 40.000 9.36 9.36 0.00 3.69
4965 6218 9.485206 TTTTAGCTGTTACTTTTACTTCTCGAT 57.515 29.630 0.00 0.00 0.00 3.59
4966 6219 8.876275 TTTTAGCTGTTACTTTTACTTCTCGA 57.124 30.769 0.00 0.00 0.00 4.04
4973 6226 9.882996 ACGGTTAATTTTAGCTGTTACTTTTAC 57.117 29.630 0.00 0.00 30.58 2.01
4974 6227 9.881529 CACGGTTAATTTTAGCTGTTACTTTTA 57.118 29.630 0.00 0.00 32.14 1.52
4975 6228 8.407832 ACACGGTTAATTTTAGCTGTTACTTTT 58.592 29.630 0.00 0.00 32.14 2.27
4976 6229 7.933396 ACACGGTTAATTTTAGCTGTTACTTT 58.067 30.769 0.00 0.00 32.14 2.66
4977 6230 7.227116 TGACACGGTTAATTTTAGCTGTTACTT 59.773 33.333 0.00 0.00 32.14 2.24
5023 6279 7.618512 ACTTGAGCTTAGGTAGATAGTGGTAAA 59.381 37.037 0.00 0.00 0.00 2.01
5024 6280 7.124052 ACTTGAGCTTAGGTAGATAGTGGTAA 58.876 38.462 0.00 0.00 0.00 2.85
5657 6955 1.300465 CATGGTCATCTCGAGGCCG 60.300 63.158 13.56 1.27 37.07 6.13
5870 7285 2.778997 CTTCTTCTCGAACGCCGCG 61.779 63.158 12.14 12.14 38.37 6.46
5894 7309 1.821332 GCCGATCTCTTTGCCCCAG 60.821 63.158 0.00 0.00 0.00 4.45
6248 7780 3.860930 GAACATGGTGGTGGGGCGT 62.861 63.158 0.00 0.00 0.00 5.68
6422 7962 1.594331 GCCGGAATATCACCTTGGTC 58.406 55.000 5.05 0.00 0.00 4.02
6875 8456 0.608640 GTCGTCAACAGGGACCTCAT 59.391 55.000 0.00 0.00 34.24 2.90
6909 8505 1.670380 GCTTCTTGTCTCAGGTCGTCC 60.670 57.143 0.00 0.00 0.00 4.79
6928 8530 2.618241 TGTTCAGTGGATGACTTGTTGC 59.382 45.455 0.00 0.00 37.77 4.17
7012 8614 1.670791 AACGGGCGAAAAAGTGAAGA 58.329 45.000 0.00 0.00 0.00 2.87
7024 8626 4.106909 ACAAAACTAAAAAGAAACGGGCG 58.893 39.130 0.00 0.00 0.00 6.13
7140 8742 0.097150 GTACCCGGTAAGTCGTCGTC 59.903 60.000 0.00 0.00 0.00 4.20
7141 8743 1.635663 CGTACCCGGTAAGTCGTCGT 61.636 60.000 0.00 0.00 0.00 4.34
7142 8744 1.060937 CGTACCCGGTAAGTCGTCG 59.939 63.158 0.00 0.00 0.00 5.12
7269 8875 6.874297 ACACATGCACGAATTAATGAAATG 57.126 33.333 0.00 0.00 0.00 2.32
7385 9000 9.882996 CATTAGACGGTAAATAGTACGTGATTA 57.117 33.333 0.00 0.00 39.95 1.75
7386 9001 7.864379 CCATTAGACGGTAAATAGTACGTGATT 59.136 37.037 0.00 0.00 39.95 2.57
7387 9002 7.365741 CCATTAGACGGTAAATAGTACGTGAT 58.634 38.462 0.00 0.00 39.95 3.06
7388 9003 6.728200 CCATTAGACGGTAAATAGTACGTGA 58.272 40.000 0.00 0.00 39.95 4.35
7389 9004 5.400485 GCCATTAGACGGTAAATAGTACGTG 59.600 44.000 0.00 0.00 39.95 4.49
7390 9005 5.300286 AGCCATTAGACGGTAAATAGTACGT 59.700 40.000 0.00 0.00 42.88 3.57
7391 9006 5.766222 AGCCATTAGACGGTAAATAGTACG 58.234 41.667 0.00 0.00 0.00 3.67
7411 9026 1.066787 GTCTCCCACTACTGTCAAGCC 60.067 57.143 0.00 0.00 0.00 4.35
7432 9047 3.495629 GGCTCAATCATCATGACTGGCTA 60.496 47.826 0.00 0.00 0.00 3.93
7433 9048 2.573369 GCTCAATCATCATGACTGGCT 58.427 47.619 0.00 0.00 0.00 4.75
7434 9049 1.607628 GGCTCAATCATCATGACTGGC 59.392 52.381 0.00 0.00 0.00 4.85
7435 9050 1.871676 CGGCTCAATCATCATGACTGG 59.128 52.381 0.00 0.00 0.00 4.00
7436 9051 1.871676 CCGGCTCAATCATCATGACTG 59.128 52.381 0.00 0.00 0.00 3.51
7437 9052 1.202734 CCCGGCTCAATCATCATGACT 60.203 52.381 0.00 0.00 0.00 3.41
7438 9053 1.233019 CCCGGCTCAATCATCATGAC 58.767 55.000 0.00 0.00 0.00 3.06
7439 9054 0.535780 GCCCGGCTCAATCATCATGA 60.536 55.000 0.71 0.00 0.00 3.07
7440 9055 0.820482 TGCCCGGCTCAATCATCATG 60.820 55.000 11.61 0.00 0.00 3.07
7441 9056 0.111832 ATGCCCGGCTCAATCATCAT 59.888 50.000 11.61 0.00 0.00 2.45
7478 9093 2.647299 TGGGACAGAATAAAGCTCCCAA 59.353 45.455 2.25 0.00 46.31 4.12
7480 9095 2.239907 AGTGGGACAGAATAAAGCTCCC 59.760 50.000 0.00 0.00 41.80 4.30
7481 9096 3.636153 AGTGGGACAGAATAAAGCTCC 57.364 47.619 0.00 0.00 41.80 4.70
7539 9154 4.157289 GCAACTTCAGATCAATCACATGGT 59.843 41.667 0.00 0.00 0.00 3.55
7581 9196 4.963373 TCCGAAGTCCACAATGAAAGTAA 58.037 39.130 0.00 0.00 0.00 2.24
7635 9250 4.569023 TGTAGCGCCGCCAGATCG 62.569 66.667 4.98 0.00 0.00 3.69
7636 9251 2.659897 CTGTAGCGCCGCCAGATC 60.660 66.667 4.98 0.00 0.00 2.75
7642 9257 4.577246 CTCTCCCTGTAGCGCCGC 62.577 72.222 2.29 0.00 0.00 6.53
7643 9258 4.577246 GCTCTCCCTGTAGCGCCG 62.577 72.222 2.29 0.00 0.00 6.46
7644 9259 3.438017 CTGCTCTCCCTGTAGCGCC 62.438 68.421 2.29 0.00 41.77 6.53
7645 9260 2.105930 CTGCTCTCCCTGTAGCGC 59.894 66.667 0.00 0.00 41.77 5.92
7646 9261 1.732917 CTCTGCTCTCCCTGTAGCG 59.267 63.158 0.00 0.00 41.77 4.26
7647 9262 1.398958 CCCTCTGCTCTCCCTGTAGC 61.399 65.000 0.00 0.00 39.25 3.58
7648 9263 0.758685 CCCCTCTGCTCTCCCTGTAG 60.759 65.000 0.00 0.00 0.00 2.74
7649 9264 1.221909 TCCCCTCTGCTCTCCCTGTA 61.222 60.000 0.00 0.00 0.00 2.74
7650 9265 1.895886 ATCCCCTCTGCTCTCCCTGT 61.896 60.000 0.00 0.00 0.00 4.00
7651 9266 0.189574 TATCCCCTCTGCTCTCCCTG 59.810 60.000 0.00 0.00 0.00 4.45
7653 9268 2.037385 ATTATCCCCTCTGCTCTCCC 57.963 55.000 0.00 0.00 0.00 4.30
7654 9269 3.392616 TCAAATTATCCCCTCTGCTCTCC 59.607 47.826 0.00 0.00 0.00 3.71
7655 9270 4.346418 TCTCAAATTATCCCCTCTGCTCTC 59.654 45.833 0.00 0.00 0.00 3.20
7656 9271 4.302067 TCTCAAATTATCCCCTCTGCTCT 58.698 43.478 0.00 0.00 0.00 4.09
7657 9272 4.346418 TCTCTCAAATTATCCCCTCTGCTC 59.654 45.833 0.00 0.00 0.00 4.26
7658 9273 4.302067 TCTCTCAAATTATCCCCTCTGCT 58.698 43.478 0.00 0.00 0.00 4.24
7659 9274 4.640364 CTCTCTCAAATTATCCCCTCTGC 58.360 47.826 0.00 0.00 0.00 4.26
7660 9275 4.102210 TGCTCTCTCAAATTATCCCCTCTG 59.898 45.833 0.00 0.00 0.00 3.35
7662 9277 4.696479 TGCTCTCTCAAATTATCCCCTC 57.304 45.455 0.00 0.00 0.00 4.30
7663 9278 4.141298 CCTTGCTCTCTCAAATTATCCCCT 60.141 45.833 0.00 0.00 0.00 4.79
7665 9280 4.140536 CCCTTGCTCTCTCAAATTATCCC 58.859 47.826 0.00 0.00 0.00 3.85
7666 9281 4.140536 CCCCTTGCTCTCTCAAATTATCC 58.859 47.826 0.00 0.00 0.00 2.59
7667 9282 4.140536 CCCCCTTGCTCTCTCAAATTATC 58.859 47.826 0.00 0.00 0.00 1.75
7668 9283 4.176120 CCCCCTTGCTCTCTCAAATTAT 57.824 45.455 0.00 0.00 0.00 1.28
7669 9284 3.652057 CCCCCTTGCTCTCTCAAATTA 57.348 47.619 0.00 0.00 0.00 1.40
7686 9301 1.141185 CTCCAGAACCCTAATCCCCC 58.859 60.000 0.00 0.00 0.00 5.40
7687 9302 1.141185 CCTCCAGAACCCTAATCCCC 58.859 60.000 0.00 0.00 0.00 4.81
7688 9303 2.050918 CTCCTCCAGAACCCTAATCCC 58.949 57.143 0.00 0.00 0.00 3.85
7690 9305 3.389656 CCTTCTCCTCCAGAACCCTAATC 59.610 52.174 0.00 0.00 36.08 1.75
7692 9307 2.385765 TCCTTCTCCTCCAGAACCCTAA 59.614 50.000 0.00 0.00 36.08 2.69
7694 9309 0.793617 TCCTTCTCCTCCAGAACCCT 59.206 55.000 0.00 0.00 36.08 4.34
7695 9310 0.906066 GTCCTTCTCCTCCAGAACCC 59.094 60.000 0.00 0.00 36.08 4.11
7696 9311 0.533032 CGTCCTTCTCCTCCAGAACC 59.467 60.000 0.00 0.00 36.08 3.62
7697 9312 0.533032 CCGTCCTTCTCCTCCAGAAC 59.467 60.000 0.00 0.00 36.08 3.01
7700 9315 1.261238 AAGCCGTCCTTCTCCTCCAG 61.261 60.000 0.00 0.00 0.00 3.86
7701 9316 1.229209 AAGCCGTCCTTCTCCTCCA 60.229 57.895 0.00 0.00 0.00 3.86
7702 9317 1.518302 GAAGCCGTCCTTCTCCTCC 59.482 63.158 5.98 0.00 45.27 4.30
7712 9327 0.100503 GCTGAGAGAGAGAAGCCGTC 59.899 60.000 0.00 0.00 0.00 4.79
7713 9328 1.319614 GGCTGAGAGAGAGAAGCCGT 61.320 60.000 0.00 0.00 45.30 5.68
7716 9331 1.185315 ACTGGCTGAGAGAGAGAAGC 58.815 55.000 0.00 0.00 34.86 3.86
7717 9332 2.159393 CGAACTGGCTGAGAGAGAGAAG 60.159 54.545 0.00 0.00 0.00 2.85
7718 9333 1.815613 CGAACTGGCTGAGAGAGAGAA 59.184 52.381 0.00 0.00 0.00 2.87
7719 9334 1.271652 ACGAACTGGCTGAGAGAGAGA 60.272 52.381 0.00 0.00 0.00 3.10
7720 9335 1.135431 CACGAACTGGCTGAGAGAGAG 60.135 57.143 0.00 0.00 0.00 3.20
7721 9336 0.884514 CACGAACTGGCTGAGAGAGA 59.115 55.000 0.00 0.00 0.00 3.10
7722 9337 0.884514 TCACGAACTGGCTGAGAGAG 59.115 55.000 0.00 0.00 0.00 3.20
7723 9338 1.550327 ATCACGAACTGGCTGAGAGA 58.450 50.000 0.00 0.00 0.00 3.10
7724 9339 2.266554 GAATCACGAACTGGCTGAGAG 58.733 52.381 0.00 0.00 0.00 3.20
7725 9340 1.618343 TGAATCACGAACTGGCTGAGA 59.382 47.619 0.00 0.00 0.00 3.27
7726 9341 1.728971 GTGAATCACGAACTGGCTGAG 59.271 52.381 0.00 0.00 0.00 3.35
7727 9342 1.344438 AGTGAATCACGAACTGGCTGA 59.656 47.619 7.83 0.00 39.64 4.26
7728 9343 1.800805 AGTGAATCACGAACTGGCTG 58.199 50.000 7.83 0.00 39.64 4.85
7729 9344 2.550830 AAGTGAATCACGAACTGGCT 57.449 45.000 7.83 0.00 39.64 4.75
7730 9345 2.808543 AGAAAGTGAATCACGAACTGGC 59.191 45.455 7.83 0.00 39.64 4.85
7731 9346 3.121944 CGAGAAAGTGAATCACGAACTGG 59.878 47.826 7.83 6.15 39.64 4.00
7732 9347 3.981416 TCGAGAAAGTGAATCACGAACTG 59.019 43.478 7.83 0.00 39.64 3.16
7733 9348 4.238761 TCGAGAAAGTGAATCACGAACT 57.761 40.909 7.83 8.15 39.64 3.01
7734 9349 4.621460 TCATCGAGAAAGTGAATCACGAAC 59.379 41.667 7.83 3.51 41.77 3.95
7735 9350 4.805219 TCATCGAGAAAGTGAATCACGAA 58.195 39.130 7.83 0.00 41.77 3.85
7736 9351 4.434713 TCATCGAGAAAGTGAATCACGA 57.565 40.909 7.83 0.68 42.44 4.35
7737 9352 4.208047 GGATCATCGAGAAAGTGAATCACG 59.792 45.833 7.83 0.00 39.64 4.35
7738 9353 5.006165 GTGGATCATCGAGAAAGTGAATCAC 59.994 44.000 5.02 5.02 34.10 3.06
7739 9354 5.111989 GTGGATCATCGAGAAAGTGAATCA 58.888 41.667 0.00 0.00 0.00 2.57
7740 9355 5.006165 GTGTGGATCATCGAGAAAGTGAATC 59.994 44.000 0.00 0.00 0.00 2.52
7741 9356 4.872691 GTGTGGATCATCGAGAAAGTGAAT 59.127 41.667 0.00 0.00 0.00 2.57
7742 9357 4.021104 AGTGTGGATCATCGAGAAAGTGAA 60.021 41.667 0.00 0.00 0.00 3.18
7743 9358 3.511540 AGTGTGGATCATCGAGAAAGTGA 59.488 43.478 0.00 0.00 0.00 3.41
7744 9359 3.854666 AGTGTGGATCATCGAGAAAGTG 58.145 45.455 0.00 0.00 0.00 3.16
7745 9360 4.543590 AAGTGTGGATCATCGAGAAAGT 57.456 40.909 0.00 0.00 0.00 2.66
7746 9361 5.410924 TGTAAGTGTGGATCATCGAGAAAG 58.589 41.667 0.00 0.00 0.00 2.62
7747 9362 5.400066 TGTAAGTGTGGATCATCGAGAAA 57.600 39.130 0.00 0.00 0.00 2.52
7748 9363 4.142160 CCTGTAAGTGTGGATCATCGAGAA 60.142 45.833 0.00 0.00 0.00 2.87
7749 9364 3.381590 CCTGTAAGTGTGGATCATCGAGA 59.618 47.826 0.00 0.00 0.00 4.04
7750 9365 3.381590 TCCTGTAAGTGTGGATCATCGAG 59.618 47.826 0.00 0.00 0.00 4.04
7751 9366 3.130516 GTCCTGTAAGTGTGGATCATCGA 59.869 47.826 0.00 0.00 32.03 3.59
7752 9367 3.131223 AGTCCTGTAAGTGTGGATCATCG 59.869 47.826 0.00 0.00 32.03 3.84
7753 9368 4.404073 AGAGTCCTGTAAGTGTGGATCATC 59.596 45.833 0.00 0.00 32.03 2.92
7754 9369 4.161189 CAGAGTCCTGTAAGTGTGGATCAT 59.839 45.833 0.00 0.00 35.70 2.45
7755 9370 3.511540 CAGAGTCCTGTAAGTGTGGATCA 59.488 47.826 0.00 0.00 35.70 2.92
7756 9371 3.118956 CCAGAGTCCTGTAAGTGTGGATC 60.119 52.174 0.00 0.00 35.52 3.36
7757 9372 2.834549 CCAGAGTCCTGTAAGTGTGGAT 59.165 50.000 0.00 0.00 35.52 3.41
7758 9373 2.248248 CCAGAGTCCTGTAAGTGTGGA 58.752 52.381 0.00 0.00 35.52 4.02
7759 9374 1.338200 GCCAGAGTCCTGTAAGTGTGG 60.338 57.143 0.00 0.00 38.74 4.17
7760 9375 1.338200 GGCCAGAGTCCTGTAAGTGTG 60.338 57.143 0.00 0.00 38.74 3.82
7761 9376 0.977395 GGCCAGAGTCCTGTAAGTGT 59.023 55.000 0.00 0.00 38.74 3.55
7762 9377 1.270907 AGGCCAGAGTCCTGTAAGTG 58.729 55.000 5.01 0.00 38.74 3.16
7763 9378 2.043252 ACTAGGCCAGAGTCCTGTAAGT 59.957 50.000 5.01 0.00 38.74 2.24
7764 9379 2.741145 ACTAGGCCAGAGTCCTGTAAG 58.259 52.381 5.01 0.00 38.74 2.34
7765 9380 2.921834 ACTAGGCCAGAGTCCTGTAA 57.078 50.000 5.01 0.00 38.74 2.41
7766 9381 2.921834 AACTAGGCCAGAGTCCTGTA 57.078 50.000 5.01 0.00 38.74 2.74
7767 9382 2.921834 TAACTAGGCCAGAGTCCTGT 57.078 50.000 5.01 0.00 38.74 4.00
7768 9383 4.038162 GTGTATAACTAGGCCAGAGTCCTG 59.962 50.000 5.01 0.00 40.09 3.86
7769 9384 4.216708 GTGTATAACTAGGCCAGAGTCCT 58.783 47.826 5.01 1.62 37.72 3.85
7770 9385 3.958798 TGTGTATAACTAGGCCAGAGTCC 59.041 47.826 5.01 0.00 0.00 3.85
7771 9386 5.593679 TTGTGTATAACTAGGCCAGAGTC 57.406 43.478 5.01 0.00 0.00 3.36
7772 9387 6.156256 TCATTTGTGTATAACTAGGCCAGAGT 59.844 38.462 5.01 4.72 0.00 3.24
7773 9388 6.582636 TCATTTGTGTATAACTAGGCCAGAG 58.417 40.000 5.01 3.92 0.00 3.35
7774 9389 6.156256 ACTCATTTGTGTATAACTAGGCCAGA 59.844 38.462 5.01 0.00 0.00 3.86
7775 9390 6.349300 ACTCATTTGTGTATAACTAGGCCAG 58.651 40.000 5.01 2.64 0.00 4.85
7776 9391 6.308015 ACTCATTTGTGTATAACTAGGCCA 57.692 37.500 5.01 0.00 0.00 5.36
7777 9392 7.723324 TCTACTCATTTGTGTATAACTAGGCC 58.277 38.462 0.00 0.00 0.00 5.19
7778 9393 7.382759 GCTCTACTCATTTGTGTATAACTAGGC 59.617 40.741 0.00 0.00 0.00 3.93
7779 9394 8.414003 TGCTCTACTCATTTGTGTATAACTAGG 58.586 37.037 0.00 0.00 0.00 3.02
7780 9395 9.239002 GTGCTCTACTCATTTGTGTATAACTAG 57.761 37.037 0.00 0.00 0.00 2.57
7781 9396 7.913821 CGTGCTCTACTCATTTGTGTATAACTA 59.086 37.037 0.00 0.00 0.00 2.24
7782 9397 6.752351 CGTGCTCTACTCATTTGTGTATAACT 59.248 38.462 0.00 0.00 0.00 2.24
7783 9398 6.508088 GCGTGCTCTACTCATTTGTGTATAAC 60.508 42.308 0.00 0.00 0.00 1.89
7784 9399 5.518847 GCGTGCTCTACTCATTTGTGTATAA 59.481 40.000 0.00 0.00 0.00 0.98
7785 9400 5.041287 GCGTGCTCTACTCATTTGTGTATA 58.959 41.667 0.00 0.00 0.00 1.47
7786 9401 3.865745 GCGTGCTCTACTCATTTGTGTAT 59.134 43.478 0.00 0.00 0.00 2.29
7787 9402 3.250744 GCGTGCTCTACTCATTTGTGTA 58.749 45.455 0.00 0.00 0.00 2.90
7788 9403 2.069273 GCGTGCTCTACTCATTTGTGT 58.931 47.619 0.00 0.00 0.00 3.72
7789 9404 2.068519 TGCGTGCTCTACTCATTTGTG 58.931 47.619 0.00 0.00 0.00 3.33
7790 9405 2.341257 CTGCGTGCTCTACTCATTTGT 58.659 47.619 0.00 0.00 0.00 2.83
7791 9406 1.662629 CCTGCGTGCTCTACTCATTTG 59.337 52.381 0.00 0.00 0.00 2.32
7792 9407 2.009042 GCCTGCGTGCTCTACTCATTT 61.009 52.381 0.00 0.00 0.00 2.32
7793 9408 0.460987 GCCTGCGTGCTCTACTCATT 60.461 55.000 0.00 0.00 0.00 2.57
7794 9409 1.142748 GCCTGCGTGCTCTACTCAT 59.857 57.895 0.00 0.00 0.00 2.90
7795 9410 2.573869 GCCTGCGTGCTCTACTCA 59.426 61.111 0.00 0.00 0.00 3.41
7796 9411 2.202810 GGCCTGCGTGCTCTACTC 60.203 66.667 0.00 0.00 0.00 2.59
7797 9412 3.775654 GGGCCTGCGTGCTCTACT 61.776 66.667 0.84 0.00 0.00 2.57
7798 9413 3.775654 AGGGCCTGCGTGCTCTAC 61.776 66.667 4.50 0.00 41.30 2.59
7799 9414 3.774528 CAGGGCCTGCGTGCTCTA 61.775 66.667 22.68 0.00 41.11 2.43
7804 9419 4.680237 TCGAACAGGGCCTGCGTG 62.680 66.667 33.04 21.52 34.37 5.34
7805 9420 4.379243 CTCGAACAGGGCCTGCGT 62.379 66.667 33.04 21.45 34.37 5.24
7814 9429 4.680237 TGGGCCGTGCTCGAACAG 62.680 66.667 10.21 0.00 39.71 3.16
7815 9430 4.243008 TTGGGCCGTGCTCGAACA 62.243 61.111 10.21 2.68 39.71 3.18
7816 9431 3.723348 GTTGGGCCGTGCTCGAAC 61.723 66.667 10.21 2.28 39.71 3.95
7817 9432 3.936203 AGTTGGGCCGTGCTCGAA 61.936 61.111 10.21 0.00 39.71 3.71
7818 9433 4.680237 CAGTTGGGCCGTGCTCGA 62.680 66.667 10.21 0.00 39.71 4.04
7828 9443 1.078143 GACTAGGCCTGCAGTTGGG 60.078 63.158 17.99 0.00 0.00 4.12
7829 9444 1.448540 CGACTAGGCCTGCAGTTGG 60.449 63.158 17.99 4.44 0.00 3.77
7830 9445 1.448540 CCGACTAGGCCTGCAGTTG 60.449 63.158 17.99 15.61 0.00 3.16
7831 9446 2.982130 CCGACTAGGCCTGCAGTT 59.018 61.111 17.99 0.15 0.00 3.16
7849 9464 4.831307 AAGACTAGCGGCGCGTCG 62.831 66.667 31.31 31.31 33.10 5.12
7850 9465 2.868999 AAGAAGACTAGCGGCGCGTC 62.869 60.000 27.59 26.47 0.00 5.19
7851 9466 1.651240 TAAGAAGACTAGCGGCGCGT 61.651 55.000 27.59 19.61 0.00 6.01
7852 9467 0.930742 CTAAGAAGACTAGCGGCGCG 60.931 60.000 27.59 16.07 0.00 6.86
7853 9468 1.209910 GCTAAGAAGACTAGCGGCGC 61.210 60.000 26.86 26.86 0.00 6.53
7854 9469 0.100682 TGCTAAGAAGACTAGCGGCG 59.899 55.000 0.51 0.51 39.53 6.46
7855 9470 1.135333 AGTGCTAAGAAGACTAGCGGC 59.865 52.381 0.00 0.00 39.53 6.53
7856 9471 3.129638 AGAAGTGCTAAGAAGACTAGCGG 59.870 47.826 0.00 0.00 39.53 5.52
7857 9472 4.364415 AGAAGTGCTAAGAAGACTAGCG 57.636 45.455 0.00 0.00 39.53 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.