Multiple sequence alignment - TraesCS7A01G293900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G293900 chr7A 100.000 4243 0 0 1 4243 377638453 377634211 0.000000e+00 7836
1 TraesCS7A01G293900 chr7A 87.195 492 42 5 1 491 5206594 5207065 1.340000e-149 540
2 TraesCS7A01G293900 chr7A 83.654 104 17 0 488 591 261047476 261047373 9.710000e-17 99
3 TraesCS7A01G293900 chr7D 97.543 2686 57 5 777 3454 335455436 335458120 0.000000e+00 4586
4 TraesCS7A01G293900 chr7D 89.390 377 37 2 3464 3840 335458104 335458477 4.970000e-129 472
5 TraesCS7A01G293900 chr7D 89.474 95 10 0 488 582 287926623 287926717 2.070000e-23 121
6 TraesCS7A01G293900 chr7B 94.535 2946 125 13 488 3398 311512118 311509174 0.000000e+00 4516
7 TraesCS7A01G293900 chr7B 91.608 143 12 0 3465 3607 311509149 311509007 9.310000e-47 198
8 TraesCS7A01G293900 chr7B 83.333 210 31 4 3635 3840 594412642 594412433 1.560000e-44 191
9 TraesCS7A01G293900 chr2B 89.918 486 47 2 6 490 521325546 521326030 3.600000e-175 625
10 TraesCS7A01G293900 chr2B 88.485 330 35 3 91 420 467554593 467554919 3.070000e-106 396
11 TraesCS7A01G293900 chrUn 92.166 434 29 4 60 490 305946215 305945784 3.630000e-170 608
12 TraesCS7A01G293900 chr5B 90.685 365 18 5 50 407 117896168 117896523 4.970000e-129 472
13 TraesCS7A01G293900 chr2D 86.872 358 43 4 3887 4243 642305877 642306231 8.550000e-107 398
14 TraesCS7A01G293900 chr2D 88.636 132 14 1 4111 4242 642307462 642307592 4.390000e-35 159
15 TraesCS7A01G293900 chr3D 81.048 496 82 9 6 493 89272190 89271699 6.660000e-103 385
16 TraesCS7A01G293900 chr1B 80.943 488 86 6 6 490 113087036 113086553 3.100000e-101 379
17 TraesCS7A01G293900 chr1B 88.298 94 11 0 488 581 225950445 225950352 3.470000e-21 113
18 TraesCS7A01G293900 chr6B 82.836 402 65 4 97 496 453523854 453523455 1.450000e-94 357
19 TraesCS7A01G293900 chr6B 89.320 206 20 2 3635 3838 532165588 532165383 1.510000e-64 257
20 TraesCS7A01G293900 chr6B 87.685 203 25 0 3638 3840 163976662 163976864 1.970000e-58 237
21 TraesCS7A01G293900 chr6B 85.854 205 29 0 3636 3840 188140690 188140486 7.140000e-53 219
22 TraesCS7A01G293900 chr5D 78.586 495 66 15 3 491 157853519 157853979 1.490000e-74 291
23 TraesCS7A01G293900 chr5D 86.341 205 24 2 3636 3840 312449097 312449297 1.990000e-53 220
24 TraesCS7A01G293900 chr3B 86.829 205 27 0 3636 3840 284636643 284636439 3.300000e-56 230
25 TraesCS7A01G293900 chr3B 85.380 171 21 4 3635 3802 703031252 703031421 1.570000e-39 174
26 TraesCS7A01G293900 chr4D 88.172 186 21 1 3643 3828 360761935 360762119 1.990000e-53 220
27 TraesCS7A01G293900 chr4B 91.000 100 9 0 492 591 535253439 535253340 7.400000e-28 135
28 TraesCS7A01G293900 chr2A 86.022 93 13 0 488 580 229301957 229302049 2.700000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G293900 chr7A 377634211 377638453 4242 True 7836.0 7836 100.0000 1 4243 1 chr7A.!!$R2 4242
1 TraesCS7A01G293900 chr7D 335455436 335458477 3041 False 2529.0 4586 93.4665 777 3840 2 chr7D.!!$F2 3063
2 TraesCS7A01G293900 chr7B 311509007 311512118 3111 True 2357.0 4516 93.0715 488 3607 2 chr7B.!!$R2 3119
3 TraesCS7A01G293900 chr2D 642305877 642307592 1715 False 278.5 398 87.7540 3887 4243 2 chr2D.!!$F1 356

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.032515 TCCATCAACGCTAGGAGGGA 60.033 55.0 0.00 0.00 41.29 4.20 F
420 421 0.034059 AAGACGAGGACTGCAGGTTG 59.966 55.0 19.93 8.58 0.00 3.77 F
425 426 0.106708 GAGGACTGCAGGTTGTGACA 59.893 55.0 19.93 0.00 0.00 3.58 F
945 974 0.177604 CCTTTCATGCTCTCGCCTCT 59.822 55.0 0.00 0.00 34.43 3.69 F
1933 1969 0.320334 TCGCTGGCATTGACGAGAAA 60.320 50.0 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1361 1396 1.283321 GGGGCAAGGAGAAAGACATCT 59.717 52.381 0.00 0.00 0.00 2.90 R
1525 1560 1.665679 CGGTGACTTCATCGGAAATGG 59.334 52.381 3.87 0.00 45.94 3.16 R
1876 1912 1.761784 AGGAGCTCGATGATCTGCTTT 59.238 47.619 7.83 2.02 35.76 3.51 R
2835 2871 1.207329 GAGGTTGAAGATAGCCGTGGT 59.793 52.381 0.00 0.00 0.00 4.16 R
3604 3640 0.106769 TCTTGGCCAACTGTCAGCAA 60.107 50.000 16.05 0.00 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.717629 TTCGTCTCACCGCCTGCG 62.718 66.667 4.20 4.20 39.44 5.18
27 28 3.490759 CGCCTGCGCAGACGATTT 61.491 61.111 37.89 0.00 43.93 2.17
28 29 2.099062 GCCTGCGCAGACGATTTG 59.901 61.111 38.06 20.12 43.93 2.32
29 30 2.680913 GCCTGCGCAGACGATTTGT 61.681 57.895 38.06 0.00 43.93 2.83
30 31 1.868997 CCTGCGCAGACGATTTGTT 59.131 52.632 38.06 0.00 43.93 2.83
31 32 0.453282 CCTGCGCAGACGATTTGTTG 60.453 55.000 38.06 13.63 43.93 3.33
32 33 0.453282 CTGCGCAGACGATTTGTTGG 60.453 55.000 33.66 0.00 43.93 3.77
33 34 1.797537 GCGCAGACGATTTGTTGGC 60.798 57.895 0.30 0.00 43.93 4.52
34 35 1.154225 CGCAGACGATTTGTTGGCC 60.154 57.895 0.00 0.00 43.93 5.36
35 36 1.851021 CGCAGACGATTTGTTGGCCA 61.851 55.000 0.00 0.00 43.93 5.36
36 37 0.387239 GCAGACGATTTGTTGGCCAC 60.387 55.000 3.88 0.75 0.00 5.01
37 38 0.240945 CAGACGATTTGTTGGCCACC 59.759 55.000 3.88 0.00 0.00 4.61
38 39 1.209127 GACGATTTGTTGGCCACCG 59.791 57.895 3.88 5.08 0.00 4.94
39 40 1.512156 GACGATTTGTTGGCCACCGT 61.512 55.000 3.88 8.60 0.00 4.83
40 41 1.209127 CGATTTGTTGGCCACCGTC 59.791 57.895 3.88 0.00 0.00 4.79
41 42 1.234615 CGATTTGTTGGCCACCGTCT 61.235 55.000 3.88 0.00 0.00 4.18
42 43 0.521735 GATTTGTTGGCCACCGTCTC 59.478 55.000 3.88 0.00 0.00 3.36
43 44 0.893727 ATTTGTTGGCCACCGTCTCC 60.894 55.000 3.88 0.00 0.00 3.71
44 45 2.969300 TTTGTTGGCCACCGTCTCCC 62.969 60.000 3.88 0.00 0.00 4.30
107 108 4.754667 GGGTGGGAAGGTCGCGTC 62.755 72.222 5.77 0.00 31.21 5.19
139 140 4.809496 CGAGGGCCAGCCATGCTT 62.809 66.667 11.50 0.00 36.40 3.91
140 141 2.832201 GAGGGCCAGCCATGCTTC 60.832 66.667 11.50 0.00 36.40 3.86
141 142 3.345028 AGGGCCAGCCATGCTTCT 61.345 61.111 11.50 0.00 36.40 2.85
142 143 2.363406 GGGCCAGCCATGCTTCTT 60.363 61.111 11.50 0.00 36.40 2.52
143 144 2.421399 GGGCCAGCCATGCTTCTTC 61.421 63.158 11.50 0.00 36.40 2.87
144 145 2.421399 GGCCAGCCATGCTTCTTCC 61.421 63.158 3.12 0.00 36.40 3.46
145 146 1.679977 GCCAGCCATGCTTCTTCCA 60.680 57.895 0.00 0.00 36.40 3.53
146 147 1.041447 GCCAGCCATGCTTCTTCCAT 61.041 55.000 0.00 0.00 36.40 3.41
147 148 1.030457 CCAGCCATGCTTCTTCCATC 58.970 55.000 0.00 0.00 36.40 3.51
148 149 1.683938 CCAGCCATGCTTCTTCCATCA 60.684 52.381 0.00 0.00 36.40 3.07
149 150 2.097036 CAGCCATGCTTCTTCCATCAA 58.903 47.619 0.00 0.00 36.40 2.57
150 151 2.097825 AGCCATGCTTCTTCCATCAAC 58.902 47.619 0.00 0.00 33.89 3.18
151 152 1.202222 GCCATGCTTCTTCCATCAACG 60.202 52.381 0.00 0.00 0.00 4.10
152 153 1.202222 CCATGCTTCTTCCATCAACGC 60.202 52.381 0.00 0.00 0.00 4.84
153 154 1.741706 CATGCTTCTTCCATCAACGCT 59.258 47.619 0.00 0.00 0.00 5.07
154 155 2.760634 TGCTTCTTCCATCAACGCTA 57.239 45.000 0.00 0.00 0.00 4.26
155 156 2.621338 TGCTTCTTCCATCAACGCTAG 58.379 47.619 0.00 0.00 0.00 3.42
156 157 1.936547 GCTTCTTCCATCAACGCTAGG 59.063 52.381 0.00 0.00 0.00 3.02
157 158 2.418746 GCTTCTTCCATCAACGCTAGGA 60.419 50.000 0.00 0.00 0.00 2.94
158 159 3.452474 CTTCTTCCATCAACGCTAGGAG 58.548 50.000 0.00 0.00 0.00 3.69
159 160 1.757118 TCTTCCATCAACGCTAGGAGG 59.243 52.381 0.00 0.00 0.00 4.30
160 161 0.830648 TTCCATCAACGCTAGGAGGG 59.169 55.000 0.00 0.00 36.35 4.30
161 162 0.032515 TCCATCAACGCTAGGAGGGA 60.033 55.000 0.00 0.00 41.29 4.20
162 163 0.390860 CCATCAACGCTAGGAGGGAG 59.609 60.000 0.00 0.00 37.14 4.30
163 164 0.390860 CATCAACGCTAGGAGGGAGG 59.609 60.000 0.00 0.00 31.91 4.30
164 165 0.760945 ATCAACGCTAGGAGGGAGGG 60.761 60.000 0.00 0.00 31.91 4.30
165 166 2.041819 AACGCTAGGAGGGAGGGG 60.042 66.667 0.00 0.00 31.91 4.79
166 167 3.698263 AACGCTAGGAGGGAGGGGG 62.698 68.421 0.00 0.00 31.91 5.40
167 168 4.159108 CGCTAGGAGGGAGGGGGT 62.159 72.222 0.00 0.00 0.00 4.95
168 169 2.446802 GCTAGGAGGGAGGGGGTG 60.447 72.222 0.00 0.00 0.00 4.61
169 170 2.287251 CTAGGAGGGAGGGGGTGG 59.713 72.222 0.00 0.00 0.00 4.61
170 171 4.103928 TAGGAGGGAGGGGGTGGC 62.104 72.222 0.00 0.00 0.00 5.01
202 203 3.771160 GCGGCGGGAGGAAGAAGA 61.771 66.667 9.78 0.00 0.00 2.87
203 204 2.978824 CGGCGGGAGGAAGAAGAA 59.021 61.111 0.00 0.00 0.00 2.52
204 205 1.295423 CGGCGGGAGGAAGAAGAAA 59.705 57.895 0.00 0.00 0.00 2.52
205 206 1.019805 CGGCGGGAGGAAGAAGAAAC 61.020 60.000 0.00 0.00 0.00 2.78
206 207 0.036306 GGCGGGAGGAAGAAGAAACA 59.964 55.000 0.00 0.00 0.00 2.83
207 208 1.544759 GGCGGGAGGAAGAAGAAACAA 60.545 52.381 0.00 0.00 0.00 2.83
208 209 2.437413 GCGGGAGGAAGAAGAAACAAT 58.563 47.619 0.00 0.00 0.00 2.71
209 210 2.820197 GCGGGAGGAAGAAGAAACAATT 59.180 45.455 0.00 0.00 0.00 2.32
210 211 3.255888 GCGGGAGGAAGAAGAAACAATTT 59.744 43.478 0.00 0.00 0.00 1.82
211 212 4.262036 GCGGGAGGAAGAAGAAACAATTTT 60.262 41.667 0.00 0.00 0.00 1.82
212 213 5.739070 GCGGGAGGAAGAAGAAACAATTTTT 60.739 40.000 0.00 0.00 0.00 1.94
230 231 3.963476 TTTTGGGTGAAAGAGGGAAGA 57.037 42.857 0.00 0.00 0.00 2.87
231 232 4.469469 TTTTGGGTGAAAGAGGGAAGAT 57.531 40.909 0.00 0.00 0.00 2.40
232 233 4.469469 TTTGGGTGAAAGAGGGAAGATT 57.531 40.909 0.00 0.00 0.00 2.40
233 234 3.721087 TGGGTGAAAGAGGGAAGATTC 57.279 47.619 0.00 0.00 0.00 2.52
234 235 2.027192 TGGGTGAAAGAGGGAAGATTCG 60.027 50.000 0.00 0.00 0.00 3.34
235 236 2.010497 GGTGAAAGAGGGAAGATTCGC 58.990 52.381 1.63 1.63 40.10 4.70
236 237 1.661112 GTGAAAGAGGGAAGATTCGCG 59.339 52.381 0.00 0.00 43.99 5.87
237 238 1.548719 TGAAAGAGGGAAGATTCGCGA 59.451 47.619 3.71 3.71 43.99 5.87
238 239 2.197577 GAAAGAGGGAAGATTCGCGAG 58.802 52.381 9.59 0.00 43.99 5.03
239 240 0.461961 AAGAGGGAAGATTCGCGAGG 59.538 55.000 9.59 0.00 43.99 4.63
240 241 1.592939 GAGGGAAGATTCGCGAGGC 60.593 63.158 9.59 5.45 43.99 4.70
241 242 2.186903 GGGAAGATTCGCGAGGCA 59.813 61.111 9.59 0.00 0.00 4.75
242 243 1.884926 GGGAAGATTCGCGAGGCAG 60.885 63.158 9.59 0.00 0.00 4.85
243 244 1.884926 GGAAGATTCGCGAGGCAGG 60.885 63.158 9.59 0.00 0.00 4.85
244 245 2.512515 AAGATTCGCGAGGCAGGC 60.513 61.111 9.59 0.00 0.00 4.85
245 246 3.315142 AAGATTCGCGAGGCAGGCA 62.315 57.895 9.59 0.00 0.00 4.75
246 247 2.803155 AAGATTCGCGAGGCAGGCAA 62.803 55.000 9.59 0.00 0.00 4.52
247 248 2.817423 GATTCGCGAGGCAGGCAAG 61.817 63.158 9.59 0.00 0.00 4.01
252 253 3.710722 CGAGGCAGGCAAGGGAGT 61.711 66.667 0.00 0.00 0.00 3.85
253 254 2.270527 GAGGCAGGCAAGGGAGTC 59.729 66.667 0.00 0.00 0.00 3.36
254 255 2.530151 AGGCAGGCAAGGGAGTCA 60.530 61.111 0.00 0.00 0.00 3.41
255 256 2.045536 GGCAGGCAAGGGAGTCAG 60.046 66.667 0.00 0.00 0.00 3.51
256 257 2.045536 GCAGGCAAGGGAGTCAGG 60.046 66.667 0.00 0.00 0.00 3.86
257 258 2.673523 CAGGCAAGGGAGTCAGGG 59.326 66.667 0.00 0.00 0.00 4.45
258 259 2.612115 AGGCAAGGGAGTCAGGGG 60.612 66.667 0.00 0.00 0.00 4.79
259 260 2.610859 GGCAAGGGAGTCAGGGGA 60.611 66.667 0.00 0.00 0.00 4.81
260 261 2.674220 GGCAAGGGAGTCAGGGGAG 61.674 68.421 0.00 0.00 0.00 4.30
261 262 2.993853 CAAGGGAGTCAGGGGAGC 59.006 66.667 0.00 0.00 0.00 4.70
262 263 1.614824 CAAGGGAGTCAGGGGAGCT 60.615 63.158 0.00 0.00 0.00 4.09
263 264 1.614824 AAGGGAGTCAGGGGAGCTG 60.615 63.158 0.00 0.00 0.00 4.24
264 265 3.791586 GGGAGTCAGGGGAGCTGC 61.792 72.222 0.00 0.00 0.00 5.25
265 266 4.154347 GGAGTCAGGGGAGCTGCG 62.154 72.222 0.00 0.00 0.00 5.18
266 267 4.828925 GAGTCAGGGGAGCTGCGC 62.829 72.222 14.75 14.75 0.00 6.09
283 284 4.521062 CGAGGCAGAAGGGAGCGG 62.521 72.222 0.00 0.00 0.00 5.52
284 285 4.847444 GAGGCAGAAGGGAGCGGC 62.847 72.222 0.00 0.00 0.00 6.53
288 289 4.521062 CAGAAGGGAGCGGCGGAG 62.521 72.222 9.78 0.00 0.00 4.63
336 337 2.279073 CGGGAGAGCAGGGGAGTA 59.721 66.667 0.00 0.00 0.00 2.59
337 338 1.830408 CGGGAGAGCAGGGGAGTAG 60.830 68.421 0.00 0.00 0.00 2.57
338 339 2.137528 GGGAGAGCAGGGGAGTAGC 61.138 68.421 0.00 0.00 0.00 3.58
339 340 2.494530 GGAGAGCAGGGGAGTAGCG 61.495 68.421 0.00 0.00 0.00 4.26
340 341 3.145422 GAGAGCAGGGGAGTAGCGC 62.145 68.421 0.00 0.00 0.00 5.92
341 342 4.577246 GAGCAGGGGAGTAGCGCG 62.577 72.222 0.00 0.00 0.00 6.86
344 345 4.514577 CAGGGGAGTAGCGCGGTG 62.515 72.222 23.02 0.00 0.00 4.94
355 356 4.473520 CGCGGTGCAGGGGATCTT 62.474 66.667 0.00 0.00 0.00 2.40
356 357 2.514824 GCGGTGCAGGGGATCTTC 60.515 66.667 0.00 0.00 0.00 2.87
357 358 2.202932 CGGTGCAGGGGATCTTCG 60.203 66.667 0.00 0.00 0.00 3.79
358 359 2.190578 GGTGCAGGGGATCTTCGG 59.809 66.667 0.00 0.00 0.00 4.30
359 360 2.514824 GTGCAGGGGATCTTCGGC 60.515 66.667 0.00 0.00 0.00 5.54
360 361 4.161295 TGCAGGGGATCTTCGGCG 62.161 66.667 0.00 0.00 0.00 6.46
361 362 4.162690 GCAGGGGATCTTCGGCGT 62.163 66.667 6.85 0.00 0.00 5.68
362 363 2.107141 CAGGGGATCTTCGGCGTC 59.893 66.667 6.85 0.00 0.00 5.19
363 364 3.155167 AGGGGATCTTCGGCGTCC 61.155 66.667 6.85 6.22 0.00 4.79
364 365 3.467226 GGGGATCTTCGGCGTCCA 61.467 66.667 15.04 0.00 33.62 4.02
365 366 2.808206 GGGGATCTTCGGCGTCCAT 61.808 63.158 15.04 2.17 33.62 3.41
366 367 1.595382 GGGATCTTCGGCGTCCATG 60.595 63.158 15.04 0.00 33.62 3.66
367 368 2.247437 GGATCTTCGGCGTCCATGC 61.247 63.158 6.85 0.00 32.23 4.06
368 369 2.586079 ATCTTCGGCGTCCATGCG 60.586 61.111 6.85 0.00 35.06 4.73
369 370 3.371097 ATCTTCGGCGTCCATGCGT 62.371 57.895 6.85 0.00 35.06 5.24
370 371 3.554692 CTTCGGCGTCCATGCGTC 61.555 66.667 6.85 0.00 35.06 5.19
371 372 3.989698 CTTCGGCGTCCATGCGTCT 62.990 63.158 6.85 0.00 33.90 4.18
372 373 4.794439 TCGGCGTCCATGCGTCTG 62.794 66.667 6.85 0.00 33.90 3.51
374 375 3.490759 GGCGTCCATGCGTCTGTG 61.491 66.667 0.00 0.00 33.21 3.66
375 376 2.738521 GCGTCCATGCGTCTGTGT 60.739 61.111 0.00 0.00 0.00 3.72
376 377 2.730672 GCGTCCATGCGTCTGTGTC 61.731 63.158 0.00 0.00 0.00 3.67
377 378 1.080501 CGTCCATGCGTCTGTGTCT 60.081 57.895 0.00 0.00 0.00 3.41
378 379 1.347097 CGTCCATGCGTCTGTGTCTG 61.347 60.000 0.00 0.00 0.00 3.51
379 380 0.038251 GTCCATGCGTCTGTGTCTGA 60.038 55.000 0.00 0.00 0.00 3.27
380 381 0.244721 TCCATGCGTCTGTGTCTGAG 59.755 55.000 0.00 0.00 0.00 3.35
381 382 1.357258 CCATGCGTCTGTGTCTGAGC 61.357 60.000 0.00 0.00 0.00 4.26
382 383 1.445066 ATGCGTCTGTGTCTGAGCG 60.445 57.895 0.00 0.00 0.00 5.03
383 384 2.807045 GCGTCTGTGTCTGAGCGG 60.807 66.667 0.00 0.00 0.00 5.52
384 385 2.807045 CGTCTGTGTCTGAGCGGC 60.807 66.667 0.00 0.00 0.00 6.53
385 386 2.807045 GTCTGTGTCTGAGCGGCG 60.807 66.667 0.51 0.51 0.00 6.46
386 387 4.056125 TCTGTGTCTGAGCGGCGG 62.056 66.667 9.78 0.00 0.00 6.13
387 388 4.056125 CTGTGTCTGAGCGGCGGA 62.056 66.667 9.78 0.00 0.00 5.54
388 389 3.978723 CTGTGTCTGAGCGGCGGAG 62.979 68.421 9.78 0.00 30.98 4.63
389 390 4.803426 GTGTCTGAGCGGCGGAGG 62.803 72.222 9.78 0.00 30.98 4.30
401 402 4.790962 CGGAGGGTCGACCGGAGA 62.791 72.222 27.68 3.94 46.96 3.71
402 403 2.362120 GGAGGGTCGACCGGAGAA 60.362 66.667 27.68 0.00 46.96 2.87
403 404 2.416432 GGAGGGTCGACCGGAGAAG 61.416 68.421 27.68 0.00 46.96 2.85
404 405 1.378250 GAGGGTCGACCGGAGAAGA 60.378 63.158 27.68 0.00 46.96 2.87
405 406 1.655885 GAGGGTCGACCGGAGAAGAC 61.656 65.000 27.68 11.57 46.96 3.01
406 407 2.484203 GGTCGACCGGAGAAGACG 59.516 66.667 20.85 4.02 34.68 4.18
407 408 2.037136 GGTCGACCGGAGAAGACGA 61.037 63.158 20.85 6.49 34.68 4.20
408 409 1.424635 GTCGACCGGAGAAGACGAG 59.575 63.158 9.46 0.00 33.82 4.18
409 410 1.744368 TCGACCGGAGAAGACGAGG 60.744 63.158 9.46 0.00 0.00 4.63
410 411 1.744368 CGACCGGAGAAGACGAGGA 60.744 63.158 9.46 0.00 0.00 3.71
411 412 1.801983 GACCGGAGAAGACGAGGAC 59.198 63.158 9.46 0.00 0.00 3.85
412 413 0.677414 GACCGGAGAAGACGAGGACT 60.677 60.000 9.46 0.00 0.00 3.85
413 414 0.961358 ACCGGAGAAGACGAGGACTG 60.961 60.000 9.46 0.00 0.00 3.51
414 415 1.137825 CGGAGAAGACGAGGACTGC 59.862 63.158 0.00 0.00 0.00 4.40
415 416 1.587043 CGGAGAAGACGAGGACTGCA 61.587 60.000 0.00 0.00 0.00 4.41
416 417 0.172352 GGAGAAGACGAGGACTGCAG 59.828 60.000 13.48 13.48 0.00 4.41
417 418 0.172352 GAGAAGACGAGGACTGCAGG 59.828 60.000 19.93 1.54 0.00 4.85
418 419 0.540830 AGAAGACGAGGACTGCAGGT 60.541 55.000 19.93 5.35 0.00 4.00
419 420 0.318762 GAAGACGAGGACTGCAGGTT 59.681 55.000 19.93 2.23 0.00 3.50
420 421 0.034059 AAGACGAGGACTGCAGGTTG 59.966 55.000 19.93 8.58 0.00 3.77
421 422 1.115930 AGACGAGGACTGCAGGTTGT 61.116 55.000 19.93 11.85 0.00 3.32
422 423 0.946221 GACGAGGACTGCAGGTTGTG 60.946 60.000 19.93 7.31 0.00 3.33
423 424 1.367471 CGAGGACTGCAGGTTGTGA 59.633 57.895 19.93 0.00 0.00 3.58
424 425 0.946221 CGAGGACTGCAGGTTGTGAC 60.946 60.000 19.93 1.84 0.00 3.67
425 426 0.106708 GAGGACTGCAGGTTGTGACA 59.893 55.000 19.93 0.00 0.00 3.58
426 427 0.107456 AGGACTGCAGGTTGTGACAG 59.893 55.000 19.93 0.00 36.75 3.51
427 428 0.886490 GGACTGCAGGTTGTGACAGG 60.886 60.000 19.93 0.00 35.68 4.00
428 429 0.106708 GACTGCAGGTTGTGACAGGA 59.893 55.000 19.93 0.00 35.68 3.86
429 430 0.546122 ACTGCAGGTTGTGACAGGAA 59.454 50.000 19.93 0.00 35.68 3.36
430 431 1.143684 ACTGCAGGTTGTGACAGGAAT 59.856 47.619 19.93 0.00 35.68 3.01
431 432 2.233271 CTGCAGGTTGTGACAGGAATT 58.767 47.619 5.57 0.00 30.78 2.17
432 433 3.181445 ACTGCAGGTTGTGACAGGAATTA 60.181 43.478 19.93 0.00 35.68 1.40
433 434 3.411446 TGCAGGTTGTGACAGGAATTAG 58.589 45.455 0.00 0.00 0.00 1.73
434 435 2.749621 GCAGGTTGTGACAGGAATTAGG 59.250 50.000 0.00 0.00 0.00 2.69
435 436 3.810743 GCAGGTTGTGACAGGAATTAGGT 60.811 47.826 0.00 0.00 0.00 3.08
436 437 3.753272 CAGGTTGTGACAGGAATTAGGTG 59.247 47.826 0.00 0.00 0.00 4.00
437 438 3.081804 GGTTGTGACAGGAATTAGGTGG 58.918 50.000 0.00 0.00 0.00 4.61
438 439 3.081804 GTTGTGACAGGAATTAGGTGGG 58.918 50.000 0.00 0.00 0.00 4.61
439 440 1.633432 TGTGACAGGAATTAGGTGGGG 59.367 52.381 0.00 0.00 0.00 4.96
440 441 1.633945 GTGACAGGAATTAGGTGGGGT 59.366 52.381 0.00 0.00 0.00 4.95
441 442 1.633432 TGACAGGAATTAGGTGGGGTG 59.367 52.381 0.00 0.00 0.00 4.61
442 443 1.633945 GACAGGAATTAGGTGGGGTGT 59.366 52.381 0.00 0.00 0.00 4.16
443 444 2.041216 GACAGGAATTAGGTGGGGTGTT 59.959 50.000 0.00 0.00 0.00 3.32
444 445 2.449345 ACAGGAATTAGGTGGGGTGTTT 59.551 45.455 0.00 0.00 0.00 2.83
445 446 3.116900 ACAGGAATTAGGTGGGGTGTTTT 60.117 43.478 0.00 0.00 0.00 2.43
446 447 4.106663 ACAGGAATTAGGTGGGGTGTTTTA 59.893 41.667 0.00 0.00 0.00 1.52
447 448 4.705023 CAGGAATTAGGTGGGGTGTTTTAG 59.295 45.833 0.00 0.00 0.00 1.85
448 449 4.355889 AGGAATTAGGTGGGGTGTTTTAGT 59.644 41.667 0.00 0.00 0.00 2.24
449 450 5.552766 AGGAATTAGGTGGGGTGTTTTAGTA 59.447 40.000 0.00 0.00 0.00 1.82
450 451 6.045813 AGGAATTAGGTGGGGTGTTTTAGTAA 59.954 38.462 0.00 0.00 0.00 2.24
451 452 6.720748 GGAATTAGGTGGGGTGTTTTAGTAAA 59.279 38.462 0.00 0.00 0.00 2.01
452 453 7.233144 GGAATTAGGTGGGGTGTTTTAGTAAAA 59.767 37.037 3.88 3.88 0.00 1.52
453 454 8.730093 AATTAGGTGGGGTGTTTTAGTAAAAT 57.270 30.769 11.12 0.00 32.22 1.82
454 455 7.527568 TTAGGTGGGGTGTTTTAGTAAAATG 57.472 36.000 11.12 0.00 32.22 2.32
455 456 4.836175 AGGTGGGGTGTTTTAGTAAAATGG 59.164 41.667 11.12 0.00 32.22 3.16
456 457 4.561938 GGTGGGGTGTTTTAGTAAAATGGC 60.562 45.833 11.12 5.16 32.22 4.40
457 458 4.282449 GTGGGGTGTTTTAGTAAAATGGCT 59.718 41.667 11.12 0.00 32.22 4.75
458 459 5.477637 GTGGGGTGTTTTAGTAAAATGGCTA 59.522 40.000 11.12 0.00 32.22 3.93
459 460 5.477637 TGGGGTGTTTTAGTAAAATGGCTAC 59.522 40.000 11.12 6.33 32.22 3.58
460 461 5.392272 GGGGTGTTTTAGTAAAATGGCTACG 60.392 44.000 11.12 0.00 32.22 3.51
461 462 5.392272 GGGTGTTTTAGTAAAATGGCTACGG 60.392 44.000 11.12 0.00 32.22 4.02
462 463 5.412286 GGTGTTTTAGTAAAATGGCTACGGA 59.588 40.000 11.12 0.00 32.22 4.69
463 464 6.402875 GGTGTTTTAGTAAAATGGCTACGGAG 60.403 42.308 11.12 0.00 32.22 4.63
464 465 6.369615 GTGTTTTAGTAAAATGGCTACGGAGA 59.630 38.462 11.12 0.00 32.22 3.71
465 466 6.369615 TGTTTTAGTAAAATGGCTACGGAGAC 59.630 38.462 11.12 0.00 32.22 3.36
467 468 4.546829 AGTAAAATGGCTACGGAGACAA 57.453 40.909 7.64 0.00 46.51 3.18
468 469 5.099042 AGTAAAATGGCTACGGAGACAAT 57.901 39.130 7.64 0.00 46.51 2.71
469 470 5.497474 AGTAAAATGGCTACGGAGACAATT 58.503 37.500 7.64 0.92 46.51 2.32
470 471 5.944007 AGTAAAATGGCTACGGAGACAATTT 59.056 36.000 20.24 20.24 46.51 1.82
471 472 5.722021 AAAATGGCTACGGAGACAATTTT 57.278 34.783 7.64 12.27 46.51 1.82
472 473 5.722021 AAATGGCTACGGAGACAATTTTT 57.278 34.783 7.64 0.00 46.51 1.94
473 474 4.701956 ATGGCTACGGAGACAATTTTTG 57.298 40.909 7.64 0.00 46.51 2.44
474 475 2.227865 TGGCTACGGAGACAATTTTTGC 59.772 45.455 0.00 0.00 37.97 3.68
475 476 2.505866 GCTACGGAGACAATTTTTGCG 58.494 47.619 0.00 0.00 0.00 4.85
476 477 2.727916 GCTACGGAGACAATTTTTGCGG 60.728 50.000 0.00 0.00 0.00 5.69
477 478 0.596082 ACGGAGACAATTTTTGCGGG 59.404 50.000 0.00 0.00 0.00 6.13
478 479 0.878416 CGGAGACAATTTTTGCGGGA 59.122 50.000 0.00 0.00 0.00 5.14
479 480 1.472480 CGGAGACAATTTTTGCGGGAT 59.528 47.619 0.00 0.00 0.00 3.85
480 481 2.731968 CGGAGACAATTTTTGCGGGATG 60.732 50.000 0.00 0.00 0.00 3.51
481 482 2.491693 GGAGACAATTTTTGCGGGATGA 59.508 45.455 0.00 0.00 0.00 2.92
482 483 3.056891 GGAGACAATTTTTGCGGGATGAA 60.057 43.478 0.00 0.00 0.00 2.57
483 484 4.168760 GAGACAATTTTTGCGGGATGAAG 58.831 43.478 0.00 0.00 0.00 3.02
484 485 3.056607 AGACAATTTTTGCGGGATGAAGG 60.057 43.478 0.00 0.00 0.00 3.46
485 486 2.028203 ACAATTTTTGCGGGATGAAGGG 60.028 45.455 0.00 0.00 0.00 3.95
486 487 2.230130 ATTTTTGCGGGATGAAGGGA 57.770 45.000 0.00 0.00 0.00 4.20
490 491 0.539986 TTGCGGGATGAAGGGAGTAC 59.460 55.000 0.00 0.00 0.00 2.73
504 505 7.788026 TGAAGGGAGTACGTTGTAATGATATT 58.212 34.615 0.00 0.00 0.00 1.28
509 510 7.208080 GGAGTACGTTGTAATGATATTCACCT 58.792 38.462 0.00 0.00 0.00 4.00
510 511 7.709613 GGAGTACGTTGTAATGATATTCACCTT 59.290 37.037 0.00 0.00 0.00 3.50
512 513 8.038944 AGTACGTTGTAATGATATTCACCTTGT 58.961 33.333 0.00 0.00 0.00 3.16
513 514 7.681939 ACGTTGTAATGATATTCACCTTGTT 57.318 32.000 0.00 0.00 0.00 2.83
515 516 9.391006 ACGTTGTAATGATATTCACCTTGTTAT 57.609 29.630 0.00 0.00 0.00 1.89
522 523 2.177394 TTCACCTTGTTATGCGCTCA 57.823 45.000 9.73 0.00 0.00 4.26
528 529 3.255642 ACCTTGTTATGCGCTCAAAATGT 59.744 39.130 9.73 4.42 0.00 2.71
533 534 5.094812 TGTTATGCGCTCAAAATGTGATTC 58.905 37.500 9.73 0.00 35.07 2.52
546 547 2.380941 TGTGATTCTGCCCCAATCATG 58.619 47.619 5.61 0.00 41.26 3.07
549 550 3.448301 GTGATTCTGCCCCAATCATGAAA 59.552 43.478 0.00 0.00 41.26 2.69
552 553 3.675348 TCTGCCCCAATCATGAAATCT 57.325 42.857 0.00 0.00 0.00 2.40
554 555 4.355549 TCTGCCCCAATCATGAAATCTTT 58.644 39.130 0.00 0.00 0.00 2.52
569 570 6.213677 TGAAATCTTTACGTGATCGGGATAG 58.786 40.000 0.00 0.00 41.85 2.08
570 571 6.040054 TGAAATCTTTACGTGATCGGGATAGA 59.960 38.462 0.00 0.00 41.85 1.98
571 572 6.401047 AATCTTTACGTGATCGGGATAGAA 57.599 37.500 0.00 0.00 41.85 2.10
588 589 6.073548 GGGATAGAATTACATCTTGAACGCTG 60.074 42.308 0.00 0.00 0.00 5.18
590 591 4.002982 AGAATTACATCTTGAACGCTGCA 58.997 39.130 0.00 0.00 0.00 4.41
615 616 1.404851 GCTTAGGTCTTCGAGCTGCTT 60.405 52.381 2.53 0.00 40.75 3.91
621 622 0.897621 TCTTCGAGCTGCTTGATCCA 59.102 50.000 19.77 5.10 0.00 3.41
623 624 1.396301 CTTCGAGCTGCTTGATCCAAC 59.604 52.381 19.77 0.00 0.00 3.77
627 628 3.056313 GCTGCTTGATCCAACGGCC 62.056 63.158 0.00 0.00 0.00 6.13
633 634 1.134946 CTTGATCCAACGGCCCAAATC 59.865 52.381 0.00 0.00 0.00 2.17
649 650 4.689812 CCCAAATCGCATCAAACAAATGAA 59.310 37.500 0.00 0.00 32.06 2.57
655 656 5.722263 TCGCATCAAACAAATGAAATGGAT 58.278 33.333 0.00 0.00 32.06 3.41
656 657 6.861144 TCGCATCAAACAAATGAAATGGATA 58.139 32.000 0.00 0.00 32.06 2.59
677 678 8.713971 TGGATAGTTAGATCTTCCAAATTGCTA 58.286 33.333 10.13 0.00 33.66 3.49
686 687 7.933033 AGATCTTCCAAATTGCTAAGAGAGATC 59.067 37.037 12.34 11.21 37.25 2.75
696 697 1.955458 AAGAGAGATCGGGGGCTCCT 61.955 60.000 0.52 0.00 0.00 3.69
736 737 3.213506 TGGAATCAGTGTGTTCTGGTTG 58.786 45.455 9.67 0.00 38.65 3.77
743 744 5.007034 TCAGTGTGTTCTGGTTGAAAAAGA 58.993 37.500 0.00 0.00 36.30 2.52
773 774 8.485578 AAAAATGGGTGTCTAATTTTGTAGGA 57.514 30.769 0.00 0.00 34.58 2.94
775 776 7.703058 AATGGGTGTCTAATTTTGTAGGAAG 57.297 36.000 0.00 0.00 0.00 3.46
780 808 7.118825 GGGTGTCTAATTTTGTAGGAAGTACAC 59.881 40.741 0.00 0.00 41.58 2.90
816 844 7.986085 ACTGCATGAACTTTGTAGTATTCTT 57.014 32.000 0.00 0.00 38.11 2.52
841 869 2.743636 TTAAGGCTTGTCTGGACGAG 57.256 50.000 10.69 12.32 43.98 4.18
860 888 3.182312 GAAGAAGCGCTTCCCAGC 58.818 61.111 39.16 24.63 45.90 4.85
917 946 5.755861 CGAGTCTCCTCATCCCTTTTATTTC 59.244 44.000 0.00 0.00 37.59 2.17
945 974 0.177604 CCTTTCATGCTCTCGCCTCT 59.822 55.000 0.00 0.00 34.43 3.69
1176 1211 1.613437 CGAAAGGAATGCCACAACCTT 59.387 47.619 0.00 0.00 43.40 3.50
1179 1214 2.683211 AGGAATGCCACAACCTTCTT 57.317 45.000 0.00 0.00 36.29 2.52
1918 1954 0.320771 ACAAGTTCAAGGCGATCGCT 60.321 50.000 36.25 21.17 41.60 4.93
1933 1969 0.320334 TCGCTGGCATTGACGAGAAA 60.320 50.000 0.00 0.00 0.00 2.52
1936 1972 2.414559 CGCTGGCATTGACGAGAAAAAT 60.415 45.455 0.00 0.00 0.00 1.82
2093 2129 2.099592 GCATTGCCGAATCTTGATTCCA 59.900 45.455 15.22 7.65 0.00 3.53
2109 2145 5.168569 TGATTCCACTTGCTTTAGTCGTAG 58.831 41.667 0.00 0.00 0.00 3.51
2131 2167 5.620206 AGTACAACAGATGAACCATGTTCA 58.380 37.500 11.64 11.64 35.04 3.18
2135 2171 6.275335 ACAACAGATGAACCATGTTCAAAAG 58.725 36.000 13.08 8.47 35.04 2.27
2260 2296 0.755686 GAGAGGACATGCCCGAAGAT 59.244 55.000 0.00 0.00 37.37 2.40
2472 2508 1.210155 CGAAAAGCGGCCAAGAAGG 59.790 57.895 2.24 0.00 41.84 3.46
3173 3209 0.969917 AGCACCTCTCACAGATCGCT 60.970 55.000 0.00 0.00 0.00 4.93
3215 3251 1.206849 CAGAGGAAGGCCAACTCTCTC 59.793 57.143 17.76 12.62 39.44 3.20
3327 3363 3.680169 TCCATGATCAACCCTAGGGAAT 58.320 45.455 35.38 22.53 38.96 3.01
3425 3461 4.377431 GGCAACTCAACTCTGTTATTCACG 60.377 45.833 0.00 0.00 0.00 4.35
3436 3472 9.924650 AACTCTGTTATTCACGACTATAAACTT 57.075 29.630 0.00 0.00 0.00 2.66
3437 3473 9.355215 ACTCTGTTATTCACGACTATAAACTTG 57.645 33.333 0.00 0.00 0.00 3.16
3438 3474 8.697846 TCTGTTATTCACGACTATAAACTTGG 57.302 34.615 0.00 0.00 0.00 3.61
3439 3475 8.308931 TCTGTTATTCACGACTATAAACTTGGT 58.691 33.333 0.00 0.00 0.00 3.67
3440 3476 9.577110 CTGTTATTCACGACTATAAACTTGGTA 57.423 33.333 0.00 0.00 0.00 3.25
3441 3477 9.577110 TGTTATTCACGACTATAAACTTGGTAG 57.423 33.333 0.00 0.00 0.00 3.18
3442 3478 9.578439 GTTATTCACGACTATAAACTTGGTAGT 57.422 33.333 0.00 0.00 35.68 2.73
3445 3481 7.686438 TCACGACTATAAACTTGGTAGTACA 57.314 36.000 2.06 0.00 33.17 2.90
3446 3482 8.109705 TCACGACTATAAACTTGGTAGTACAA 57.890 34.615 2.06 0.00 33.17 2.41
3447 3483 8.023128 TCACGACTATAAACTTGGTAGTACAAC 58.977 37.037 2.06 0.00 33.17 3.32
3448 3484 8.025445 CACGACTATAAACTTGGTAGTACAACT 58.975 37.037 2.06 0.00 33.17 3.16
3449 3485 8.579863 ACGACTATAAACTTGGTAGTACAACTT 58.420 33.333 2.06 0.00 33.17 2.66
3450 3486 9.415544 CGACTATAAACTTGGTAGTACAACTTT 57.584 33.333 2.06 0.00 33.17 2.66
3503 3539 2.709475 CGCTACCGCTGCATTTCC 59.291 61.111 0.00 0.00 0.00 3.13
3512 3548 1.401931 CGCTGCATTTCCACCTCTTTG 60.402 52.381 0.00 0.00 0.00 2.77
3528 3564 0.955428 TTTGCTGCTTGGTAGGCTCG 60.955 55.000 0.00 0.00 0.00 5.03
3574 3610 6.822170 GGAGAAAAATCTTATACGACTTGGGT 59.178 38.462 0.00 0.00 0.00 4.51
3604 3640 3.382832 CGTGAGACCCGCTTCCCT 61.383 66.667 0.00 0.00 0.00 4.20
3611 3647 2.747855 CCCGCTTCCCTTGCTGAC 60.748 66.667 0.00 0.00 0.00 3.51
3619 3655 2.270986 CCCTTGCTGACAGTTGGCC 61.271 63.158 3.99 0.00 0.00 5.36
3622 3658 0.313043 CTTGCTGACAGTTGGCCAAG 59.687 55.000 21.21 11.19 0.00 3.61
3632 3668 2.353889 CAGTTGGCCAAGATGAATCTCG 59.646 50.000 21.21 2.18 35.76 4.04
3636 3672 1.601430 GGCCAAGATGAATCTCGAAGC 59.399 52.381 0.00 0.00 35.76 3.86
3647 3683 6.954616 TGAATCTCGAAGCGTTTTGTAATA 57.045 33.333 0.00 0.00 0.00 0.98
3654 3690 5.411977 TCGAAGCGTTTTGTAATATTTGGGA 59.588 36.000 0.00 0.00 0.00 4.37
3657 3693 6.827586 AGCGTTTTGTAATATTTGGGAAGA 57.172 33.333 0.00 0.00 0.00 2.87
3662 3698 8.466798 CGTTTTGTAATATTTGGGAAGAGGAAT 58.533 33.333 0.00 0.00 0.00 3.01
3665 3701 7.219601 TGTAATATTTGGGAAGAGGAATGGA 57.780 36.000 0.00 0.00 0.00 3.41
3679 3715 5.663556 AGAGGAATGGAAGTTTAGAGTAGGG 59.336 44.000 0.00 0.00 0.00 3.53
3681 3717 5.663556 AGGAATGGAAGTTTAGAGTAGGGAG 59.336 44.000 0.00 0.00 0.00 4.30
3691 3727 8.431910 AGTTTAGAGTAGGGAGTTGTATTGAA 57.568 34.615 0.00 0.00 0.00 2.69
3793 3829 9.803315 GAGAATTTATATTCCCTTGTTTGGTTC 57.197 33.333 2.66 0.00 40.91 3.62
3798 3834 2.765689 TCCCTTGTTTGGTTCATGGT 57.234 45.000 0.00 0.00 0.00 3.55
3799 3835 3.885976 TCCCTTGTTTGGTTCATGGTA 57.114 42.857 0.00 0.00 0.00 3.25
3802 3838 4.770010 TCCCTTGTTTGGTTCATGGTAATC 59.230 41.667 0.00 0.00 0.00 1.75
3805 3841 5.243730 CCTTGTTTGGTTCATGGTAATCAGT 59.756 40.000 0.00 0.00 0.00 3.41
3810 3846 3.843619 TGGTTCATGGTAATCAGTGAGGA 59.156 43.478 0.00 0.00 0.00 3.71
3822 3858 3.099905 TCAGTGAGGAACTAGACATGGG 58.900 50.000 0.00 0.00 41.55 4.00
3830 3866 6.443849 TGAGGAACTAGACATGGGAAGTTAAT 59.556 38.462 0.00 2.28 41.55 1.40
3834 3870 8.211629 GGAACTAGACATGGGAAGTTAATGTAT 58.788 37.037 0.00 0.00 34.74 2.29
3840 3876 9.561069 AGACATGGGAAGTTAATGTATGTTATC 57.439 33.333 0.00 0.00 34.74 1.75
3841 3877 9.337396 GACATGGGAAGTTAATGTATGTTATCA 57.663 33.333 0.00 0.00 34.74 2.15
3842 3878 9.120538 ACATGGGAAGTTAATGTATGTTATCAC 57.879 33.333 0.00 0.00 32.86 3.06
3843 3879 9.119418 CATGGGAAGTTAATGTATGTTATCACA 57.881 33.333 0.00 0.00 37.31 3.58
3844 3880 9.693739 ATGGGAAGTTAATGTATGTTATCACAA 57.306 29.630 0.00 0.00 36.16 3.33
3845 3881 9.693739 TGGGAAGTTAATGTATGTTATCACAAT 57.306 29.630 0.00 0.00 36.16 2.71
3854 3890 7.929941 TGTATGTTATCACAATACAAAGGCA 57.070 32.000 0.00 0.00 36.16 4.75
3855 3891 8.341892 TGTATGTTATCACAATACAAAGGCAA 57.658 30.769 0.00 0.00 36.16 4.52
3856 3892 8.797438 TGTATGTTATCACAATACAAAGGCAAA 58.203 29.630 0.00 0.00 36.16 3.68
3857 3893 9.072294 GTATGTTATCACAATACAAAGGCAAAC 57.928 33.333 0.00 0.00 36.16 2.93
3858 3894 7.283625 TGTTATCACAATACAAAGGCAAACT 57.716 32.000 0.00 0.00 0.00 2.66
3859 3895 7.144661 TGTTATCACAATACAAAGGCAAACTG 58.855 34.615 0.00 0.00 0.00 3.16
3860 3896 7.013750 TGTTATCACAATACAAAGGCAAACTGA 59.986 33.333 0.00 0.00 0.00 3.41
3861 3897 5.843673 TCACAATACAAAGGCAAACTGAA 57.156 34.783 0.00 0.00 0.00 3.02
3862 3898 5.587289 TCACAATACAAAGGCAAACTGAAC 58.413 37.500 0.00 0.00 0.00 3.18
3863 3899 4.744631 CACAATACAAAGGCAAACTGAACC 59.255 41.667 0.00 0.00 0.00 3.62
3864 3900 4.404073 ACAATACAAAGGCAAACTGAACCA 59.596 37.500 0.00 0.00 0.00 3.67
3865 3901 2.959507 ACAAAGGCAAACTGAACCAC 57.040 45.000 0.00 0.00 0.00 4.16
3866 3902 2.175202 ACAAAGGCAAACTGAACCACA 58.825 42.857 0.00 0.00 0.00 4.17
3867 3903 2.765699 ACAAAGGCAAACTGAACCACAT 59.234 40.909 0.00 0.00 0.00 3.21
3868 3904 3.125316 CAAAGGCAAACTGAACCACATG 58.875 45.455 0.00 0.00 0.00 3.21
3869 3905 2.071778 AGGCAAACTGAACCACATGT 57.928 45.000 0.00 0.00 0.00 3.21
3870 3906 2.387757 AGGCAAACTGAACCACATGTT 58.612 42.857 0.00 0.00 40.81 2.71
3871 3907 2.765699 AGGCAAACTGAACCACATGTTT 59.234 40.909 0.00 0.00 37.29 2.83
3872 3908 3.197549 AGGCAAACTGAACCACATGTTTT 59.802 39.130 0.00 0.00 37.29 2.43
3873 3909 3.309410 GGCAAACTGAACCACATGTTTTG 59.691 43.478 10.99 10.99 37.29 2.44
3874 3910 3.932089 GCAAACTGAACCACATGTTTTGT 59.068 39.130 14.91 3.42 37.29 2.83
3885 3921 3.968649 ACATGTTTTGTGCTTGCTAGTG 58.031 40.909 0.00 0.00 37.11 2.74
3892 3928 1.554617 TGTGCTTGCTAGTGATGGCTA 59.445 47.619 0.00 0.00 0.00 3.93
3894 3930 1.554617 TGCTTGCTAGTGATGGCTACA 59.445 47.619 0.00 0.00 0.00 2.74
3911 3947 1.081092 CACTTCCCCTCCTCCCTCA 59.919 63.158 0.00 0.00 0.00 3.86
3915 3951 2.284699 CCCCTCCTCCCTCACGTT 60.285 66.667 0.00 0.00 0.00 3.99
3921 3957 0.903454 TCCTCCCTCACGTTTCCTCC 60.903 60.000 0.00 0.00 0.00 4.30
3963 3999 4.899239 CCCTCGCCGGCAGATGAC 62.899 72.222 28.98 0.00 0.00 3.06
3986 4022 4.888325 CCCGCTCCCCTCCCTGAT 62.888 72.222 0.00 0.00 0.00 2.90
3988 4024 2.123077 CGCTCCCCTCCCTGATCT 60.123 66.667 0.00 0.00 0.00 2.75
3990 4026 1.383803 GCTCCCCTCCCTGATCTGT 60.384 63.158 0.00 0.00 0.00 3.41
4003 4039 0.179134 GATCTGTTCTGTCCCCGTCG 60.179 60.000 0.00 0.00 0.00 5.12
4006 4042 1.524863 CTGTTCTGTCCCCGTCGTCT 61.525 60.000 0.00 0.00 0.00 4.18
4009 4045 2.361357 CTGTCCCCGTCGTCTCCT 60.361 66.667 0.00 0.00 0.00 3.69
4020 4056 2.364448 GTCTCCTCCTCCCCGCTT 60.364 66.667 0.00 0.00 0.00 4.68
4046 4082 3.412408 GGACTGCTCCCTTCCCCC 61.412 72.222 0.00 0.00 0.00 5.40
4087 4123 1.495148 GGGCAAATAGGTTCTAGGCCT 59.505 52.381 11.78 11.78 39.79 5.19
4113 4149 2.538939 CGACTACGCATCTGACATCGAA 60.539 50.000 0.00 0.00 0.00 3.71
4129 5526 1.299976 GAAGTGGATGACCCGCCTT 59.700 57.895 0.00 0.00 46.65 4.35
4137 5534 4.011517 GACCCGCCTTCCCGTTGA 62.012 66.667 0.00 0.00 0.00 3.18
4145 5542 0.611896 CCTTCCCGTTGATGGCCTTT 60.612 55.000 3.32 0.00 32.09 3.11
4158 5555 2.893398 CCTTTCCTCCCCTCGTCG 59.107 66.667 0.00 0.00 0.00 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.717629 CGCAGGCGGTGAGACGAA 62.718 66.667 5.63 0.00 35.47 3.85
11 12 2.099062 CAAATCGTCTGCGCAGGC 59.901 61.111 35.36 33.56 38.14 4.85
12 13 0.453282 CAACAAATCGTCTGCGCAGG 60.453 55.000 35.36 21.39 38.14 4.85
13 14 0.453282 CCAACAAATCGTCTGCGCAG 60.453 55.000 31.53 31.53 38.14 5.18
14 15 1.573932 CCAACAAATCGTCTGCGCA 59.426 52.632 10.98 10.98 38.14 6.09
15 16 1.797537 GCCAACAAATCGTCTGCGC 60.798 57.895 0.00 0.00 38.14 6.09
16 17 1.154225 GGCCAACAAATCGTCTGCG 60.154 57.895 0.00 0.00 39.92 5.18
17 18 0.387239 GTGGCCAACAAATCGTCTGC 60.387 55.000 7.24 0.00 0.00 4.26
18 19 0.240945 GGTGGCCAACAAATCGTCTG 59.759 55.000 18.33 0.00 0.00 3.51
19 20 1.234615 CGGTGGCCAACAAATCGTCT 61.235 55.000 23.36 0.00 0.00 4.18
20 21 1.209127 CGGTGGCCAACAAATCGTC 59.791 57.895 23.36 0.00 0.00 4.20
21 22 1.512156 GACGGTGGCCAACAAATCGT 61.512 55.000 23.36 16.95 35.97 3.73
22 23 1.209127 GACGGTGGCCAACAAATCG 59.791 57.895 23.36 13.94 0.00 3.34
23 24 0.521735 GAGACGGTGGCCAACAAATC 59.478 55.000 23.36 14.97 0.00 2.17
24 25 0.893727 GGAGACGGTGGCCAACAAAT 60.894 55.000 23.36 5.01 0.00 2.32
25 26 1.527380 GGAGACGGTGGCCAACAAA 60.527 57.895 23.36 0.00 0.00 2.83
26 27 2.112297 GGAGACGGTGGCCAACAA 59.888 61.111 23.36 0.00 0.00 2.83
27 28 3.948719 GGGAGACGGTGGCCAACA 61.949 66.667 23.36 0.00 0.00 3.33
90 91 4.754667 GACGCGACCTTCCCACCC 62.755 72.222 15.93 0.00 0.00 4.61
122 123 4.809496 AAGCATGGCTGGCCCTCG 62.809 66.667 9.28 0.00 39.62 4.63
123 124 2.832201 GAAGCATGGCTGGCCCTC 60.832 66.667 9.28 0.00 39.62 4.30
124 125 2.850828 GAAGAAGCATGGCTGGCCCT 62.851 60.000 9.28 0.00 39.62 5.19
125 126 2.363406 AAGAAGCATGGCTGGCCC 60.363 61.111 9.28 0.00 39.62 5.80
126 127 2.421399 GGAAGAAGCATGGCTGGCC 61.421 63.158 4.43 4.43 39.62 5.36
127 128 1.041447 ATGGAAGAAGCATGGCTGGC 61.041 55.000 0.00 0.00 39.62 4.85
128 129 1.030457 GATGGAAGAAGCATGGCTGG 58.970 55.000 0.00 0.00 39.62 4.85
129 130 1.758936 TGATGGAAGAAGCATGGCTG 58.241 50.000 0.00 0.00 39.62 4.85
130 131 2.097825 GTTGATGGAAGAAGCATGGCT 58.902 47.619 0.00 0.00 42.56 4.75
131 132 1.202222 CGTTGATGGAAGAAGCATGGC 60.202 52.381 0.00 0.00 0.00 4.40
132 133 1.202222 GCGTTGATGGAAGAAGCATGG 60.202 52.381 0.00 0.00 0.00 3.66
133 134 1.741706 AGCGTTGATGGAAGAAGCATG 59.258 47.619 0.00 0.00 0.00 4.06
134 135 2.119801 AGCGTTGATGGAAGAAGCAT 57.880 45.000 0.00 0.00 0.00 3.79
135 136 2.621338 CTAGCGTTGATGGAAGAAGCA 58.379 47.619 0.00 0.00 0.00 3.91
136 137 1.936547 CCTAGCGTTGATGGAAGAAGC 59.063 52.381 0.00 0.00 0.00 3.86
137 138 3.452474 CTCCTAGCGTTGATGGAAGAAG 58.548 50.000 0.00 0.00 0.00 2.85
138 139 2.168521 CCTCCTAGCGTTGATGGAAGAA 59.831 50.000 0.00 0.00 0.00 2.52
139 140 1.757118 CCTCCTAGCGTTGATGGAAGA 59.243 52.381 0.00 0.00 0.00 2.87
140 141 1.202580 CCCTCCTAGCGTTGATGGAAG 60.203 57.143 0.00 0.00 0.00 3.46
141 142 0.830648 CCCTCCTAGCGTTGATGGAA 59.169 55.000 0.00 0.00 0.00 3.53
142 143 0.032515 TCCCTCCTAGCGTTGATGGA 60.033 55.000 0.00 0.00 0.00 3.41
143 144 0.390860 CTCCCTCCTAGCGTTGATGG 59.609 60.000 0.00 0.00 0.00 3.51
144 145 0.390860 CCTCCCTCCTAGCGTTGATG 59.609 60.000 0.00 0.00 0.00 3.07
145 146 0.760945 CCCTCCCTCCTAGCGTTGAT 60.761 60.000 0.00 0.00 0.00 2.57
146 147 1.381327 CCCTCCCTCCTAGCGTTGA 60.381 63.158 0.00 0.00 0.00 3.18
147 148 2.435693 CCCCTCCCTCCTAGCGTTG 61.436 68.421 0.00 0.00 0.00 4.10
148 149 2.041819 CCCCTCCCTCCTAGCGTT 60.042 66.667 0.00 0.00 0.00 4.84
149 150 4.159108 CCCCCTCCCTCCTAGCGT 62.159 72.222 0.00 0.00 0.00 5.07
150 151 4.159108 ACCCCCTCCCTCCTAGCG 62.159 72.222 0.00 0.00 0.00 4.26
151 152 2.446802 CACCCCCTCCCTCCTAGC 60.447 72.222 0.00 0.00 0.00 3.42
152 153 2.287251 CCACCCCCTCCCTCCTAG 59.713 72.222 0.00 0.00 0.00 3.02
153 154 4.103928 GCCACCCCCTCCCTCCTA 62.104 72.222 0.00 0.00 0.00 2.94
185 186 2.798148 TTTCTTCTTCCTCCCGCCGC 62.798 60.000 0.00 0.00 0.00 6.53
186 187 1.019805 GTTTCTTCTTCCTCCCGCCG 61.020 60.000 0.00 0.00 0.00 6.46
187 188 0.036306 TGTTTCTTCTTCCTCCCGCC 59.964 55.000 0.00 0.00 0.00 6.13
188 189 1.892209 TTGTTTCTTCTTCCTCCCGC 58.108 50.000 0.00 0.00 0.00 6.13
189 190 5.453567 AAAATTGTTTCTTCTTCCTCCCG 57.546 39.130 0.00 0.00 0.00 5.14
209 210 4.258457 TCTTCCCTCTTTCACCCAAAAA 57.742 40.909 0.00 0.00 0.00 1.94
210 211 3.963476 TCTTCCCTCTTTCACCCAAAA 57.037 42.857 0.00 0.00 0.00 2.44
211 212 4.407365 GAATCTTCCCTCTTTCACCCAAA 58.593 43.478 0.00 0.00 0.00 3.28
212 213 3.559171 CGAATCTTCCCTCTTTCACCCAA 60.559 47.826 0.00 0.00 0.00 4.12
213 214 2.027192 CGAATCTTCCCTCTTTCACCCA 60.027 50.000 0.00 0.00 0.00 4.51
214 215 2.633488 CGAATCTTCCCTCTTTCACCC 58.367 52.381 0.00 0.00 0.00 4.61
215 216 2.010497 GCGAATCTTCCCTCTTTCACC 58.990 52.381 0.00 0.00 0.00 4.02
216 217 1.661112 CGCGAATCTTCCCTCTTTCAC 59.339 52.381 0.00 0.00 0.00 3.18
217 218 1.548719 TCGCGAATCTTCCCTCTTTCA 59.451 47.619 6.20 0.00 0.00 2.69
218 219 2.197577 CTCGCGAATCTTCCCTCTTTC 58.802 52.381 11.33 0.00 0.00 2.62
219 220 1.134670 CCTCGCGAATCTTCCCTCTTT 60.135 52.381 11.33 0.00 0.00 2.52
220 221 0.461961 CCTCGCGAATCTTCCCTCTT 59.538 55.000 11.33 0.00 0.00 2.85
221 222 2.022240 GCCTCGCGAATCTTCCCTCT 62.022 60.000 11.33 0.00 0.00 3.69
222 223 1.592939 GCCTCGCGAATCTTCCCTC 60.593 63.158 11.33 0.00 0.00 4.30
223 224 2.303549 CTGCCTCGCGAATCTTCCCT 62.304 60.000 11.33 0.00 0.00 4.20
224 225 1.884926 CTGCCTCGCGAATCTTCCC 60.885 63.158 11.33 0.00 0.00 3.97
225 226 1.884926 CCTGCCTCGCGAATCTTCC 60.885 63.158 11.33 0.00 0.00 3.46
226 227 2.529619 GCCTGCCTCGCGAATCTTC 61.530 63.158 11.33 0.00 0.00 2.87
227 228 2.512515 GCCTGCCTCGCGAATCTT 60.513 61.111 11.33 0.00 0.00 2.40
228 229 3.315142 TTGCCTGCCTCGCGAATCT 62.315 57.895 11.33 0.00 0.00 2.40
229 230 2.817423 CTTGCCTGCCTCGCGAATC 61.817 63.158 11.33 5.19 0.00 2.52
230 231 2.821366 CTTGCCTGCCTCGCGAAT 60.821 61.111 11.33 0.00 0.00 3.34
235 236 3.672295 GACTCCCTTGCCTGCCTCG 62.672 68.421 0.00 0.00 0.00 4.63
236 237 2.270527 GACTCCCTTGCCTGCCTC 59.729 66.667 0.00 0.00 0.00 4.70
237 238 2.530151 TGACTCCCTTGCCTGCCT 60.530 61.111 0.00 0.00 0.00 4.75
238 239 2.045536 CTGACTCCCTTGCCTGCC 60.046 66.667 0.00 0.00 0.00 4.85
239 240 2.045536 CCTGACTCCCTTGCCTGC 60.046 66.667 0.00 0.00 0.00 4.85
240 241 2.673523 CCCTGACTCCCTTGCCTG 59.326 66.667 0.00 0.00 0.00 4.85
241 242 2.612115 CCCCTGACTCCCTTGCCT 60.612 66.667 0.00 0.00 0.00 4.75
242 243 2.610859 TCCCCTGACTCCCTTGCC 60.611 66.667 0.00 0.00 0.00 4.52
243 244 2.993853 CTCCCCTGACTCCCTTGC 59.006 66.667 0.00 0.00 0.00 4.01
244 245 1.614824 AGCTCCCCTGACTCCCTTG 60.615 63.158 0.00 0.00 0.00 3.61
245 246 1.614824 CAGCTCCCCTGACTCCCTT 60.615 63.158 0.00 0.00 44.64 3.95
246 247 2.040278 CAGCTCCCCTGACTCCCT 59.960 66.667 0.00 0.00 44.64 4.20
247 248 3.791586 GCAGCTCCCCTGACTCCC 61.792 72.222 0.00 0.00 44.64 4.30
248 249 4.154347 CGCAGCTCCCCTGACTCC 62.154 72.222 0.00 0.00 44.64 3.85
266 267 4.521062 CCGCTCCCTTCTGCCTCG 62.521 72.222 0.00 0.00 0.00 4.63
267 268 4.847444 GCCGCTCCCTTCTGCCTC 62.847 72.222 0.00 0.00 0.00 4.70
271 272 4.521062 CTCCGCCGCTCCCTTCTG 62.521 72.222 0.00 0.00 0.00 3.02
319 320 1.830408 CTACTCCCCTGCTCTCCCG 60.830 68.421 0.00 0.00 0.00 5.14
320 321 2.137528 GCTACTCCCCTGCTCTCCC 61.138 68.421 0.00 0.00 0.00 4.30
321 322 2.494530 CGCTACTCCCCTGCTCTCC 61.495 68.421 0.00 0.00 0.00 3.71
322 323 3.124686 CGCTACTCCCCTGCTCTC 58.875 66.667 0.00 0.00 0.00 3.20
323 324 3.151022 GCGCTACTCCCCTGCTCT 61.151 66.667 0.00 0.00 0.00 4.09
324 325 4.577246 CGCGCTACTCCCCTGCTC 62.577 72.222 5.56 0.00 0.00 4.26
327 328 4.514577 CACCGCGCTACTCCCCTG 62.515 72.222 5.56 0.00 0.00 4.45
338 339 4.473520 AAGATCCCCTGCACCGCG 62.474 66.667 0.00 0.00 0.00 6.46
339 340 2.514824 GAAGATCCCCTGCACCGC 60.515 66.667 0.00 0.00 0.00 5.68
340 341 2.202932 CGAAGATCCCCTGCACCG 60.203 66.667 0.00 0.00 0.00 4.94
341 342 2.190578 CCGAAGATCCCCTGCACC 59.809 66.667 0.00 0.00 0.00 5.01
342 343 2.514824 GCCGAAGATCCCCTGCAC 60.515 66.667 0.00 0.00 0.00 4.57
343 344 4.161295 CGCCGAAGATCCCCTGCA 62.161 66.667 0.00 0.00 0.00 4.41
344 345 4.162690 ACGCCGAAGATCCCCTGC 62.163 66.667 0.00 0.00 0.00 4.85
345 346 2.107141 GACGCCGAAGATCCCCTG 59.893 66.667 0.00 0.00 0.00 4.45
346 347 3.155167 GGACGCCGAAGATCCCCT 61.155 66.667 0.00 0.00 0.00 4.79
347 348 2.808206 ATGGACGCCGAAGATCCCC 61.808 63.158 0.00 0.00 0.00 4.81
348 349 1.595382 CATGGACGCCGAAGATCCC 60.595 63.158 0.00 0.00 0.00 3.85
349 350 2.247437 GCATGGACGCCGAAGATCC 61.247 63.158 0.00 0.00 0.00 3.36
350 351 2.589492 CGCATGGACGCCGAAGATC 61.589 63.158 0.00 0.00 0.00 2.75
351 352 2.586079 CGCATGGACGCCGAAGAT 60.586 61.111 0.00 0.00 0.00 2.40
352 353 3.982372 GACGCATGGACGCCGAAGA 62.982 63.158 0.00 0.00 36.19 2.87
353 354 3.554692 GACGCATGGACGCCGAAG 61.555 66.667 0.00 0.00 36.19 3.79
354 355 4.063967 AGACGCATGGACGCCGAA 62.064 61.111 0.00 0.00 36.19 4.30
355 356 4.794439 CAGACGCATGGACGCCGA 62.794 66.667 0.00 0.00 36.19 5.54
357 358 3.490759 CACAGACGCATGGACGCC 61.491 66.667 0.00 0.00 36.19 5.68
358 359 2.730672 GACACAGACGCATGGACGC 61.731 63.158 0.00 0.00 36.19 5.19
359 360 1.080501 AGACACAGACGCATGGACG 60.081 57.895 0.00 0.00 39.50 4.79
360 361 0.038251 TCAGACACAGACGCATGGAC 60.038 55.000 0.00 0.00 0.00 4.02
361 362 0.244721 CTCAGACACAGACGCATGGA 59.755 55.000 0.00 0.00 0.00 3.41
362 363 1.357258 GCTCAGACACAGACGCATGG 61.357 60.000 0.00 0.00 0.00 3.66
363 364 1.681025 CGCTCAGACACAGACGCATG 61.681 60.000 0.00 0.00 0.00 4.06
364 365 1.445066 CGCTCAGACACAGACGCAT 60.445 57.895 0.00 0.00 0.00 4.73
365 366 2.050077 CGCTCAGACACAGACGCA 60.050 61.111 0.00 0.00 0.00 5.24
366 367 2.807045 CCGCTCAGACACAGACGC 60.807 66.667 0.00 0.00 0.00 5.19
367 368 2.807045 GCCGCTCAGACACAGACG 60.807 66.667 0.00 0.00 0.00 4.18
368 369 2.807045 CGCCGCTCAGACACAGAC 60.807 66.667 0.00 0.00 0.00 3.51
369 370 4.056125 CCGCCGCTCAGACACAGA 62.056 66.667 0.00 0.00 0.00 3.41
370 371 3.978723 CTCCGCCGCTCAGACACAG 62.979 68.421 0.00 0.00 0.00 3.66
371 372 4.056125 CTCCGCCGCTCAGACACA 62.056 66.667 0.00 0.00 0.00 3.72
372 373 4.803426 CCTCCGCCGCTCAGACAC 62.803 72.222 0.00 0.00 0.00 3.67
384 385 4.790962 TCTCCGGTCGACCCTCCG 62.791 72.222 28.52 16.79 45.42 4.63
385 386 2.362120 TTCTCCGGTCGACCCTCC 60.362 66.667 28.52 4.15 0.00 4.30
386 387 1.378250 TCTTCTCCGGTCGACCCTC 60.378 63.158 28.52 4.51 0.00 4.30
387 388 1.678300 GTCTTCTCCGGTCGACCCT 60.678 63.158 28.52 0.00 0.00 4.34
388 389 2.883621 GTCTTCTCCGGTCGACCC 59.116 66.667 28.52 11.28 0.00 4.46
389 390 1.979831 CTCGTCTTCTCCGGTCGACC 61.980 65.000 25.28 25.28 0.00 4.79
390 391 1.424635 CTCGTCTTCTCCGGTCGAC 59.575 63.158 7.13 7.13 0.00 4.20
391 392 1.744368 CCTCGTCTTCTCCGGTCGA 60.744 63.158 0.00 0.00 0.00 4.20
392 393 1.744368 TCCTCGTCTTCTCCGGTCG 60.744 63.158 0.00 0.00 0.00 4.79
393 394 0.677414 AGTCCTCGTCTTCTCCGGTC 60.677 60.000 0.00 0.00 0.00 4.79
394 395 0.961358 CAGTCCTCGTCTTCTCCGGT 60.961 60.000 0.00 0.00 0.00 5.28
395 396 1.803943 CAGTCCTCGTCTTCTCCGG 59.196 63.158 0.00 0.00 0.00 5.14
396 397 1.137825 GCAGTCCTCGTCTTCTCCG 59.862 63.158 0.00 0.00 0.00 4.63
397 398 0.172352 CTGCAGTCCTCGTCTTCTCC 59.828 60.000 5.25 0.00 0.00 3.71
398 399 0.172352 CCTGCAGTCCTCGTCTTCTC 59.828 60.000 13.81 0.00 0.00 2.87
399 400 0.540830 ACCTGCAGTCCTCGTCTTCT 60.541 55.000 13.81 0.00 0.00 2.85
400 401 0.318762 AACCTGCAGTCCTCGTCTTC 59.681 55.000 13.81 0.00 0.00 2.87
401 402 0.034059 CAACCTGCAGTCCTCGTCTT 59.966 55.000 13.81 0.00 0.00 3.01
402 403 1.115930 ACAACCTGCAGTCCTCGTCT 61.116 55.000 13.81 0.00 0.00 4.18
403 404 0.946221 CACAACCTGCAGTCCTCGTC 60.946 60.000 13.81 0.00 0.00 4.20
404 405 1.069765 CACAACCTGCAGTCCTCGT 59.930 57.895 13.81 0.00 0.00 4.18
405 406 0.946221 GTCACAACCTGCAGTCCTCG 60.946 60.000 13.81 0.00 0.00 4.63
406 407 0.106708 TGTCACAACCTGCAGTCCTC 59.893 55.000 13.81 0.00 0.00 3.71
407 408 0.107456 CTGTCACAACCTGCAGTCCT 59.893 55.000 13.81 0.00 0.00 3.85
408 409 0.886490 CCTGTCACAACCTGCAGTCC 60.886 60.000 13.81 0.00 0.00 3.85
409 410 0.106708 TCCTGTCACAACCTGCAGTC 59.893 55.000 13.81 0.00 0.00 3.51
410 411 0.546122 TTCCTGTCACAACCTGCAGT 59.454 50.000 13.81 0.00 0.00 4.40
411 412 1.901591 ATTCCTGTCACAACCTGCAG 58.098 50.000 6.78 6.78 0.00 4.41
412 413 2.363306 AATTCCTGTCACAACCTGCA 57.637 45.000 0.00 0.00 0.00 4.41
413 414 2.749621 CCTAATTCCTGTCACAACCTGC 59.250 50.000 0.00 0.00 0.00 4.85
414 415 3.753272 CACCTAATTCCTGTCACAACCTG 59.247 47.826 0.00 0.00 0.00 4.00
415 416 3.244911 CCACCTAATTCCTGTCACAACCT 60.245 47.826 0.00 0.00 0.00 3.50
416 417 3.081804 CCACCTAATTCCTGTCACAACC 58.918 50.000 0.00 0.00 0.00 3.77
417 418 3.081804 CCCACCTAATTCCTGTCACAAC 58.918 50.000 0.00 0.00 0.00 3.32
418 419 2.041081 CCCCACCTAATTCCTGTCACAA 59.959 50.000 0.00 0.00 0.00 3.33
419 420 1.633432 CCCCACCTAATTCCTGTCACA 59.367 52.381 0.00 0.00 0.00 3.58
420 421 1.633945 ACCCCACCTAATTCCTGTCAC 59.366 52.381 0.00 0.00 0.00 3.67
421 422 1.633432 CACCCCACCTAATTCCTGTCA 59.367 52.381 0.00 0.00 0.00 3.58
422 423 1.633945 ACACCCCACCTAATTCCTGTC 59.366 52.381 0.00 0.00 0.00 3.51
423 424 1.755200 ACACCCCACCTAATTCCTGT 58.245 50.000 0.00 0.00 0.00 4.00
424 425 2.899303 AACACCCCACCTAATTCCTG 57.101 50.000 0.00 0.00 0.00 3.86
425 426 3.915346 AAAACACCCCACCTAATTCCT 57.085 42.857 0.00 0.00 0.00 3.36
426 427 4.669700 ACTAAAACACCCCACCTAATTCC 58.330 43.478 0.00 0.00 0.00 3.01
427 428 7.764141 TTTACTAAAACACCCCACCTAATTC 57.236 36.000 0.00 0.00 0.00 2.17
428 429 8.590204 CATTTTACTAAAACACCCCACCTAATT 58.410 33.333 0.00 0.00 32.37 1.40
429 430 7.179516 CCATTTTACTAAAACACCCCACCTAAT 59.820 37.037 0.00 0.00 32.37 1.73
430 431 6.494146 CCATTTTACTAAAACACCCCACCTAA 59.506 38.462 0.00 0.00 32.37 2.69
431 432 6.011481 CCATTTTACTAAAACACCCCACCTA 58.989 40.000 0.00 0.00 32.37 3.08
432 433 4.836175 CCATTTTACTAAAACACCCCACCT 59.164 41.667 0.00 0.00 32.37 4.00
433 434 4.561938 GCCATTTTACTAAAACACCCCACC 60.562 45.833 0.00 0.00 32.37 4.61
434 435 4.282449 AGCCATTTTACTAAAACACCCCAC 59.718 41.667 0.00 0.00 32.37 4.61
435 436 4.484912 AGCCATTTTACTAAAACACCCCA 58.515 39.130 0.00 0.00 32.37 4.96
436 437 5.392272 CGTAGCCATTTTACTAAAACACCCC 60.392 44.000 0.00 0.00 32.37 4.95
437 438 5.392272 CCGTAGCCATTTTACTAAAACACCC 60.392 44.000 0.00 0.00 32.37 4.61
438 439 5.412286 TCCGTAGCCATTTTACTAAAACACC 59.588 40.000 0.00 0.00 32.37 4.16
439 440 6.369615 TCTCCGTAGCCATTTTACTAAAACAC 59.630 38.462 0.00 0.00 32.37 3.32
440 441 6.369615 GTCTCCGTAGCCATTTTACTAAAACA 59.630 38.462 0.00 0.00 32.37 2.83
441 442 6.369615 TGTCTCCGTAGCCATTTTACTAAAAC 59.630 38.462 0.00 0.00 32.37 2.43
442 443 6.465948 TGTCTCCGTAGCCATTTTACTAAAA 58.534 36.000 0.00 0.00 34.41 1.52
443 444 6.040209 TGTCTCCGTAGCCATTTTACTAAA 57.960 37.500 0.00 0.00 0.00 1.85
444 445 5.664294 TGTCTCCGTAGCCATTTTACTAA 57.336 39.130 0.00 0.00 0.00 2.24
445 446 5.664294 TTGTCTCCGTAGCCATTTTACTA 57.336 39.130 0.00 0.00 0.00 1.82
446 447 4.546829 TTGTCTCCGTAGCCATTTTACT 57.453 40.909 0.00 0.00 0.00 2.24
447 448 5.813080 AATTGTCTCCGTAGCCATTTTAC 57.187 39.130 0.00 0.00 0.00 2.01
448 449 6.827586 AAAATTGTCTCCGTAGCCATTTTA 57.172 33.333 0.00 0.00 0.00 1.52
449 450 5.722021 AAAATTGTCTCCGTAGCCATTTT 57.278 34.783 0.00 0.00 0.00 1.82
450 451 5.469479 CAAAAATTGTCTCCGTAGCCATTT 58.531 37.500 0.00 0.00 0.00 2.32
451 452 4.618227 GCAAAAATTGTCTCCGTAGCCATT 60.618 41.667 0.00 0.00 0.00 3.16
452 453 3.119495 GCAAAAATTGTCTCCGTAGCCAT 60.119 43.478 0.00 0.00 0.00 4.40
453 454 2.227865 GCAAAAATTGTCTCCGTAGCCA 59.772 45.455 0.00 0.00 0.00 4.75
454 455 2.727916 CGCAAAAATTGTCTCCGTAGCC 60.728 50.000 0.00 0.00 0.00 3.93
455 456 2.505866 CGCAAAAATTGTCTCCGTAGC 58.494 47.619 0.00 0.00 0.00 3.58
456 457 2.159572 CCCGCAAAAATTGTCTCCGTAG 60.160 50.000 0.00 0.00 0.00 3.51
457 458 1.807742 CCCGCAAAAATTGTCTCCGTA 59.192 47.619 0.00 0.00 0.00 4.02
458 459 0.596082 CCCGCAAAAATTGTCTCCGT 59.404 50.000 0.00 0.00 0.00 4.69
459 460 0.878416 TCCCGCAAAAATTGTCTCCG 59.122 50.000 0.00 0.00 0.00 4.63
460 461 2.491693 TCATCCCGCAAAAATTGTCTCC 59.508 45.455 0.00 0.00 0.00 3.71
461 462 3.848272 TCATCCCGCAAAAATTGTCTC 57.152 42.857 0.00 0.00 0.00 3.36
462 463 3.056607 CCTTCATCCCGCAAAAATTGTCT 60.057 43.478 0.00 0.00 0.00 3.41
463 464 3.253230 CCTTCATCCCGCAAAAATTGTC 58.747 45.455 0.00 0.00 0.00 3.18
464 465 2.028203 CCCTTCATCCCGCAAAAATTGT 60.028 45.455 0.00 0.00 0.00 2.71
465 466 2.233431 TCCCTTCATCCCGCAAAAATTG 59.767 45.455 0.00 0.00 0.00 2.32
466 467 2.497273 CTCCCTTCATCCCGCAAAAATT 59.503 45.455 0.00 0.00 0.00 1.82
467 468 2.102578 CTCCCTTCATCCCGCAAAAAT 58.897 47.619 0.00 0.00 0.00 1.82
468 469 1.203001 ACTCCCTTCATCCCGCAAAAA 60.203 47.619 0.00 0.00 0.00 1.94
469 470 0.404040 ACTCCCTTCATCCCGCAAAA 59.596 50.000 0.00 0.00 0.00 2.44
470 471 1.065709 GTACTCCCTTCATCCCGCAAA 60.066 52.381 0.00 0.00 0.00 3.68
471 472 0.539986 GTACTCCCTTCATCCCGCAA 59.460 55.000 0.00 0.00 0.00 4.85
472 473 1.672854 CGTACTCCCTTCATCCCGCA 61.673 60.000 0.00 0.00 0.00 5.69
473 474 1.067582 CGTACTCCCTTCATCCCGC 59.932 63.158 0.00 0.00 0.00 6.13
474 475 0.822164 AACGTACTCCCTTCATCCCG 59.178 55.000 0.00 0.00 0.00 5.14
475 476 1.553704 ACAACGTACTCCCTTCATCCC 59.446 52.381 0.00 0.00 0.00 3.85
476 477 4.460948 TTACAACGTACTCCCTTCATCC 57.539 45.455 0.00 0.00 0.00 3.51
477 478 5.657474 TCATTACAACGTACTCCCTTCATC 58.343 41.667 0.00 0.00 0.00 2.92
478 479 5.670792 TCATTACAACGTACTCCCTTCAT 57.329 39.130 0.00 0.00 0.00 2.57
479 480 5.670792 ATCATTACAACGTACTCCCTTCA 57.329 39.130 0.00 0.00 0.00 3.02
480 481 7.924412 TGAATATCATTACAACGTACTCCCTTC 59.076 37.037 0.00 0.00 0.00 3.46
481 482 7.709613 GTGAATATCATTACAACGTACTCCCTT 59.290 37.037 0.00 0.00 0.00 3.95
482 483 7.208080 GTGAATATCATTACAACGTACTCCCT 58.792 38.462 0.00 0.00 0.00 4.20
483 484 6.423001 GGTGAATATCATTACAACGTACTCCC 59.577 42.308 0.00 0.00 0.00 4.30
484 485 7.208080 AGGTGAATATCATTACAACGTACTCC 58.792 38.462 0.00 0.00 0.00 3.85
485 486 8.540492 CAAGGTGAATATCATTACAACGTACTC 58.460 37.037 0.00 0.00 0.00 2.59
486 487 8.038944 ACAAGGTGAATATCATTACAACGTACT 58.961 33.333 0.00 0.00 0.00 2.73
490 491 9.650371 CATAACAAGGTGAATATCATTACAACG 57.350 33.333 0.00 0.00 0.00 4.10
504 505 2.177394 TTGAGCGCATAACAAGGTGA 57.823 45.000 11.47 0.00 0.00 4.02
509 510 4.495911 TCACATTTTGAGCGCATAACAA 57.504 36.364 11.47 7.71 0.00 2.83
510 511 4.700268 ATCACATTTTGAGCGCATAACA 57.300 36.364 11.47 0.76 37.77 2.41
512 513 5.334319 CAGAATCACATTTTGAGCGCATAA 58.666 37.500 11.47 0.10 37.77 1.90
513 514 4.731483 GCAGAATCACATTTTGAGCGCATA 60.731 41.667 11.47 0.00 37.77 3.14
515 516 2.669113 GCAGAATCACATTTTGAGCGCA 60.669 45.455 11.47 0.00 37.77 6.09
522 523 3.839490 TGATTGGGGCAGAATCACATTTT 59.161 39.130 6.37 0.00 35.38 1.82
528 529 3.385314 TTCATGATTGGGGCAGAATCA 57.615 42.857 11.45 11.45 42.53 2.57
533 534 4.748277 AAAGATTTCATGATTGGGGCAG 57.252 40.909 0.00 0.00 0.00 4.85
546 547 6.444633 TCTATCCCGATCACGTAAAGATTTC 58.555 40.000 0.00 0.00 37.88 2.17
549 550 6.591750 ATTCTATCCCGATCACGTAAAGAT 57.408 37.500 0.00 0.00 37.88 2.40
552 553 7.041635 TGTAATTCTATCCCGATCACGTAAA 57.958 36.000 0.00 0.00 37.88 2.01
554 555 6.657966 AGATGTAATTCTATCCCGATCACGTA 59.342 38.462 0.00 0.00 37.88 3.57
569 570 4.093408 TCTGCAGCGTTCAAGATGTAATTC 59.907 41.667 9.47 0.00 0.00 2.17
570 571 4.002982 TCTGCAGCGTTCAAGATGTAATT 58.997 39.130 9.47 0.00 0.00 1.40
571 572 3.372206 GTCTGCAGCGTTCAAGATGTAAT 59.628 43.478 9.47 0.00 0.00 1.89
588 589 1.202582 TCGAAGACCTAAGCTGTCTGC 59.797 52.381 6.00 3.56 42.10 4.26
590 591 1.474879 GCTCGAAGACCTAAGCTGTCT 59.525 52.381 0.00 0.00 44.75 3.41
597 598 1.893137 TCAAGCAGCTCGAAGACCTAA 59.107 47.619 0.00 0.00 0.00 2.69
599 600 0.901124 ATCAAGCAGCTCGAAGACCT 59.099 50.000 0.00 0.00 0.00 3.85
604 605 1.442769 GTTGGATCAAGCAGCTCGAA 58.557 50.000 0.00 0.00 0.00 3.71
615 616 1.029408 CGATTTGGGCCGTTGGATCA 61.029 55.000 0.00 0.00 0.00 2.92
621 622 1.247419 TTGATGCGATTTGGGCCGTT 61.247 50.000 0.00 0.00 0.00 4.44
623 624 0.801836 GTTTGATGCGATTTGGGCCG 60.802 55.000 0.00 0.00 0.00 6.13
627 628 5.842619 TTCATTTGTTTGATGCGATTTGG 57.157 34.783 0.00 0.00 0.00 3.28
633 634 6.753279 ACTATCCATTTCATTTGTTTGATGCG 59.247 34.615 0.00 0.00 0.00 4.73
649 650 8.854117 GCAATTTGGAAGATCTAACTATCCATT 58.146 33.333 12.77 4.23 39.74 3.16
655 656 9.823647 CTCTTAGCAATTTGGAAGATCTAACTA 57.176 33.333 0.00 0.00 0.00 2.24
656 657 8.543774 TCTCTTAGCAATTTGGAAGATCTAACT 58.456 33.333 0.00 0.00 0.00 2.24
677 678 1.458588 GGAGCCCCCGATCTCTCTT 60.459 63.158 0.00 0.00 0.00 2.85
686 687 4.410400 GAACCACAGGAGCCCCCG 62.410 72.222 0.00 0.00 40.87 5.73
696 697 5.560722 TCCATCTAGAAACAAGAACCACA 57.439 39.130 0.00 0.00 0.00 4.17
751 752 7.238710 ACTTCCTACAAAATTAGACACCCATT 58.761 34.615 0.00 0.00 0.00 3.16
773 774 5.942872 GCAGTTTGCATAAGATGTGTACTT 58.057 37.500 0.00 0.00 44.26 2.24
816 844 4.215399 CGTCCAGACAAGCCTTAAAAATGA 59.785 41.667 0.00 0.00 0.00 2.57
860 888 0.291701 GCTTTTTGCGCGCTAAATCG 59.708 50.000 34.15 27.88 0.00 3.34
871 899 3.174375 GTCGATGGAGAATGCTTTTTGC 58.826 45.455 0.00 0.00 43.25 3.68
1361 1396 1.283321 GGGGCAAGGAGAAAGACATCT 59.717 52.381 0.00 0.00 0.00 2.90
1451 1486 3.636231 CGGAACCTCCCCAGCACA 61.636 66.667 0.00 0.00 31.13 4.57
1525 1560 1.665679 CGGTGACTTCATCGGAAATGG 59.334 52.381 3.87 0.00 45.94 3.16
1876 1912 1.761784 AGGAGCTCGATGATCTGCTTT 59.238 47.619 7.83 2.02 35.76 3.51
1918 1954 3.057596 GGACATTTTTCTCGTCAATGCCA 60.058 43.478 0.00 0.00 32.08 4.92
2093 2129 5.835257 TGTTGTACTACGACTAAAGCAAGT 58.165 37.500 7.90 0.00 33.63 3.16
2109 2145 5.940192 TGAACATGGTTCATCTGTTGTAC 57.060 39.130 7.66 0.00 33.46 2.90
2177 2213 5.920273 CGTCTGCATATTTCAAACCAACTTT 59.080 36.000 0.00 0.00 0.00 2.66
2237 2273 2.692368 GGGCATGTCCTCTCCCCA 60.692 66.667 9.76 0.00 35.75 4.96
2835 2871 1.207329 GAGGTTGAAGATAGCCGTGGT 59.793 52.381 0.00 0.00 0.00 4.16
3309 3345 4.310740 ACAGATTCCCTAGGGTTGATCAT 58.689 43.478 27.58 16.52 36.47 2.45
3327 3363 1.080093 GAATCCACCACGCGACAGA 60.080 57.895 15.93 1.88 0.00 3.41
3416 3452 9.578439 ACTACCAAGTTTATAGTCGTGAATAAC 57.422 33.333 0.00 0.00 29.00 1.89
3453 3489 7.663043 AAAATTGTACTACCACCCTCAAAAA 57.337 32.000 0.00 0.00 0.00 1.94
3454 3490 7.663043 AAAAATTGTACTACCACCCTCAAAA 57.337 32.000 0.00 0.00 0.00 2.44
3512 3548 3.198489 GCGAGCCTACCAAGCAGC 61.198 66.667 0.00 0.00 0.00 5.25
3528 3564 4.061596 CCCTTAAATTGGATCTCTCTCGC 58.938 47.826 0.00 0.00 0.00 5.03
3604 3640 0.106769 TCTTGGCCAACTGTCAGCAA 60.107 50.000 16.05 0.00 0.00 3.91
3611 3647 2.353889 CGAGATTCATCTTGGCCAACTG 59.646 50.000 16.05 15.14 37.25 3.16
3619 3655 4.590400 AAACGCTTCGAGATTCATCTTG 57.410 40.909 0.00 0.00 37.25 3.02
3622 3658 4.327854 ACAAAACGCTTCGAGATTCATC 57.672 40.909 0.00 0.00 0.00 2.92
3632 3668 7.309920 TCTTCCCAAATATTACAAAACGCTTC 58.690 34.615 0.00 0.00 0.00 3.86
3636 3672 7.385778 TCCTCTTCCCAAATATTACAAAACG 57.614 36.000 0.00 0.00 0.00 3.60
3647 3683 4.682021 ACTTCCATTCCTCTTCCCAAAT 57.318 40.909 0.00 0.00 0.00 2.32
3654 3690 6.157123 CCCTACTCTAAACTTCCATTCCTCTT 59.843 42.308 0.00 0.00 0.00 2.85
3657 3693 5.600749 TCCCTACTCTAAACTTCCATTCCT 58.399 41.667 0.00 0.00 0.00 3.36
3662 3698 5.152934 ACAACTCCCTACTCTAAACTTCCA 58.847 41.667 0.00 0.00 0.00 3.53
3665 3701 8.431910 TCAATACAACTCCCTACTCTAAACTT 57.568 34.615 0.00 0.00 0.00 2.66
3696 3732 9.653287 TGAGAATAAAACGTATCATCCCATATC 57.347 33.333 0.00 0.00 0.00 1.63
3720 3756 8.034215 CCTATTATGTGCCAAACAAAAGATTGA 58.966 33.333 0.00 0.00 43.61 2.57
3772 3808 7.456269 ACCATGAACCAAACAAGGGAATATAAA 59.544 33.333 0.00 0.00 31.49 1.40
3773 3809 6.957020 ACCATGAACCAAACAAGGGAATATAA 59.043 34.615 0.00 0.00 31.49 0.98
3775 3811 5.341169 ACCATGAACCAAACAAGGGAATAT 58.659 37.500 0.00 0.00 31.49 1.28
3793 3829 6.127338 TGTCTAGTTCCTCACTGATTACCATG 60.127 42.308 0.00 0.00 35.97 3.66
3798 3834 5.363868 CCCATGTCTAGTTCCTCACTGATTA 59.636 44.000 0.00 0.00 35.97 1.75
3799 3835 4.163078 CCCATGTCTAGTTCCTCACTGATT 59.837 45.833 0.00 0.00 35.97 2.57
3802 3838 3.099905 TCCCATGTCTAGTTCCTCACTG 58.900 50.000 0.00 0.00 35.97 3.66
3805 3841 3.791320 ACTTCCCATGTCTAGTTCCTCA 58.209 45.455 0.00 0.00 0.00 3.86
3810 3846 8.548877 ACATACATTAACTTCCCATGTCTAGTT 58.451 33.333 8.17 8.17 33.19 2.24
3830 3866 7.929941 TGCCTTTGTATTGTGATAACATACA 57.070 32.000 0.00 0.00 0.00 2.29
3834 3870 7.013750 TCAGTTTGCCTTTGTATTGTGATAACA 59.986 33.333 0.00 0.00 0.00 2.41
3840 3876 4.744631 GGTTCAGTTTGCCTTTGTATTGTG 59.255 41.667 0.00 0.00 0.00 3.33
3841 3877 4.404073 TGGTTCAGTTTGCCTTTGTATTGT 59.596 37.500 0.00 0.00 0.00 2.71
3842 3878 4.744631 GTGGTTCAGTTTGCCTTTGTATTG 59.255 41.667 0.00 0.00 0.00 1.90
3843 3879 4.404073 TGTGGTTCAGTTTGCCTTTGTATT 59.596 37.500 0.00 0.00 0.00 1.89
3844 3880 3.957497 TGTGGTTCAGTTTGCCTTTGTAT 59.043 39.130 0.00 0.00 0.00 2.29
3845 3881 3.357203 TGTGGTTCAGTTTGCCTTTGTA 58.643 40.909 0.00 0.00 0.00 2.41
3846 3882 2.175202 TGTGGTTCAGTTTGCCTTTGT 58.825 42.857 0.00 0.00 0.00 2.83
3847 3883 2.957491 TGTGGTTCAGTTTGCCTTTG 57.043 45.000 0.00 0.00 0.00 2.77
3848 3884 2.765699 ACATGTGGTTCAGTTTGCCTTT 59.234 40.909 0.00 0.00 0.00 3.11
3849 3885 2.387757 ACATGTGGTTCAGTTTGCCTT 58.612 42.857 0.00 0.00 0.00 4.35
3850 3886 2.071778 ACATGTGGTTCAGTTTGCCT 57.928 45.000 0.00 0.00 0.00 4.75
3851 3887 2.888834 AACATGTGGTTCAGTTTGCC 57.111 45.000 0.00 0.00 33.35 4.52
3852 3888 3.932089 ACAAAACATGTGGTTCAGTTTGC 59.068 39.130 14.01 0.00 41.93 3.68
3864 3900 3.631686 TCACTAGCAAGCACAAAACATGT 59.368 39.130 0.00 0.00 45.34 3.21
3865 3901 4.227512 TCACTAGCAAGCACAAAACATG 57.772 40.909 0.00 0.00 0.00 3.21
3866 3902 4.321452 CCATCACTAGCAAGCACAAAACAT 60.321 41.667 0.00 0.00 0.00 2.71
3867 3903 3.004629 CCATCACTAGCAAGCACAAAACA 59.995 43.478 0.00 0.00 0.00 2.83
3868 3904 3.568538 CCATCACTAGCAAGCACAAAAC 58.431 45.455 0.00 0.00 0.00 2.43
3869 3905 2.030007 GCCATCACTAGCAAGCACAAAA 60.030 45.455 0.00 0.00 0.00 2.44
3870 3906 1.541147 GCCATCACTAGCAAGCACAAA 59.459 47.619 0.00 0.00 0.00 2.83
3871 3907 1.167851 GCCATCACTAGCAAGCACAA 58.832 50.000 0.00 0.00 0.00 3.33
3872 3908 0.325933 AGCCATCACTAGCAAGCACA 59.674 50.000 0.00 0.00 0.00 4.57
3873 3909 1.936547 GTAGCCATCACTAGCAAGCAC 59.063 52.381 0.00 0.00 0.00 4.40
3874 3910 1.554617 TGTAGCCATCACTAGCAAGCA 59.445 47.619 0.00 0.00 0.00 3.91
3875 3911 1.936547 GTGTAGCCATCACTAGCAAGC 59.063 52.381 0.00 0.00 33.59 4.01
3876 3912 3.533606 AGTGTAGCCATCACTAGCAAG 57.466 47.619 4.58 0.00 43.17 4.01
3877 3913 3.369471 GGAAGTGTAGCCATCACTAGCAA 60.369 47.826 6.49 0.00 44.03 3.91
3878 3914 2.168521 GGAAGTGTAGCCATCACTAGCA 59.831 50.000 6.49 0.00 44.03 3.49
3879 3915 2.483889 GGGAAGTGTAGCCATCACTAGC 60.484 54.545 6.49 3.36 44.03 3.42
3880 3916 2.103263 GGGGAAGTGTAGCCATCACTAG 59.897 54.545 6.49 0.00 44.03 2.57
3881 3917 2.116238 GGGGAAGTGTAGCCATCACTA 58.884 52.381 6.49 0.00 44.03 2.74
3882 3918 0.912486 GGGGAAGTGTAGCCATCACT 59.088 55.000 1.08 1.08 46.30 3.41
3883 3919 0.912486 AGGGGAAGTGTAGCCATCAC 59.088 55.000 0.00 0.00 36.22 3.06
3884 3920 1.204146 GAGGGGAAGTGTAGCCATCA 58.796 55.000 0.00 0.00 0.00 3.07
3885 3921 0.470341 GGAGGGGAAGTGTAGCCATC 59.530 60.000 0.00 0.00 0.00 3.51
3892 3928 1.081277 GAGGGAGGAGGGGAAGTGT 59.919 63.158 0.00 0.00 0.00 3.55
3894 3930 1.081277 GTGAGGGAGGAGGGGAAGT 59.919 63.158 0.00 0.00 0.00 3.01
3975 4011 0.835941 CAGAACAGATCAGGGAGGGG 59.164 60.000 0.00 0.00 0.00 4.79
3986 4022 1.521450 GACGACGGGGACAGAACAGA 61.521 60.000 0.00 0.00 0.00 3.41
3988 4024 1.521450 GAGACGACGGGGACAGAACA 61.521 60.000 0.00 0.00 0.00 3.18
3990 4026 1.975407 GGAGACGACGGGGACAGAA 60.975 63.158 0.00 0.00 0.00 3.02
4003 4039 2.364448 AAGCGGGGAGGAGGAGAC 60.364 66.667 0.00 0.00 0.00 3.36
4020 4056 2.283529 GGAGCAGTCCAACTCCGGA 61.284 63.158 2.93 2.93 42.92 5.14
4065 4101 1.140252 GCCTAGAACCTATTTGCCCGA 59.860 52.381 0.00 0.00 0.00 5.14
4095 4131 2.786027 CACTTCGATGTCAGATGCGTAG 59.214 50.000 0.13 0.00 0.00 3.51
4107 4143 1.154205 GCGGGTCATCCACTTCGATG 61.154 60.000 0.00 0.00 40.92 3.84
4108 4144 1.144057 GCGGGTCATCCACTTCGAT 59.856 57.895 0.00 0.00 34.36 3.59
4109 4145 2.577059 GCGGGTCATCCACTTCGA 59.423 61.111 0.00 0.00 34.36 3.71
4113 4149 2.670148 GGAAGGCGGGTCATCCACT 61.670 63.158 0.00 0.00 34.36 4.00
4129 5526 1.001393 GGAAAGGCCATCAACGGGA 60.001 57.895 5.01 0.00 36.34 5.14
4137 5534 2.378634 CGAGGGGAGGAAAGGCCAT 61.379 63.158 5.01 0.00 40.02 4.40
4141 5538 1.982938 ACGACGAGGGGAGGAAAGG 60.983 63.158 0.00 0.00 0.00 3.11
4177 5574 0.320073 CACCCGGAGCAAACTTACGA 60.320 55.000 0.73 0.00 0.00 3.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.