AutoCloner

Multiple sequence alignment - TraesCS7A01G290500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7A01G290500	chr7A	100.000	2177	0	0	1	2177	352627375	352625199	0.000000e+00	4021
1	TraesCS7A01G290500	chr3A	94.903	1962	83	5	1	1947	66007365	66009324	0.000000e+00	3053
2	TraesCS7A01G290500	chr3A	95.726	234	9	1	1945	2177	66009399	66009632	2.040000e-100	375
3	TraesCS7A01G290500	chr6D	94.750	1962	87	4	1	1947	389254936	389252976	0.000000e+00	3038
4	TraesCS7A01G290500	chr6D	94.699	1962	88	4	1	1947	389250141	389248181	0.000000e+00	3033
5	TraesCS7A01G290500	chr6D	96.154	234	8	1	1945	2177	389252901	389252668	4.390000e-102	381
6	TraesCS7A01G290500	chr3D	94.699	1962	87	5	1	1947	589265756	589267715	0.000000e+00	3031
7	TraesCS7A01G290500	chr7B	94.648	1962	89	4	1	1947	662724171	662722211	0.000000e+00	3027
8	TraesCS7A01G290500	chr7B	94.037	1962	87	6	1	1947	663101658	663103604	0.000000e+00	2948
9	TraesCS7A01G290500	chr5D	94.597	1962	86	6	1	1947	503243039	503241083	0.000000e+00	3018
10	TraesCS7A01G290500	chr5D	94.546	1962	90	5	1	1947	503238793	503236834	0.000000e+00	3014
11	TraesCS7A01G290500	chr5D	94.530	1956	89	4	1	1942	503229012	503227061	0.000000e+00	3003
12	TraesCS7A01G290500	chr5D	95.726	234	9	1	1945	2177	503226442	503226209	2.040000e-100	375
13	TraesCS7A01G290500	chr5D	95.726	234	9	1	1945	2177	503231226	503230993	2.040000e-100	375
14	TraesCS7A01G290500	chr5D	95.726	234	9	1	1945	2177	503236759	503236526	2.040000e-100	375
15	TraesCS7A01G290500	chrUn	94.193	1963	94	7	1	1947	216508351	216510309	0.000000e+00	2976
16	TraesCS7A01G290500	chrUn	94.433	1401	63	3	1	1387	398829560	398828161	0.000000e+00	2141
17	TraesCS7A01G290500	chrUn	95.924	368	15	0	1	368	444108879	444108512	4.000000e-167	597
18	TraesCS7A01G290500	chrUn	95.726	234	9	1	1945	2177	216510384	216510617	2.040000e-100	375
19	TraesCS7A01G290500	chr1D	94.385	1318	59	3	1	1304	254384255	254385571	0.000000e+00	2010
20	TraesCS7A01G290500	chr1D	95.726	234	9	1	1945	2177	254386862	254387095	2.040000e-100	375
21	TraesCS7A01G290500	chr5B	96.137	233	9	0	1945	2177	432717978	432717746	4.390000e-102	381
22	TraesCS7A01G290500	chr6A	95.726	234	9	1	1945	2177	608870020	608870253	2.040000e-100	375

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7A01G290500	chr7A	352625199	352627375	2176	True	4021.000000	4021	100.000000	1	2177	1	chr7A.!!$R1	2176
1	TraesCS7A01G290500	chr3A	66007365	66009632	2267	False	1714.000000	3053	95.314500	1	2177	2	chr3A.!!$F1	2176
2	TraesCS7A01G290500	chr6D	389248181	389254936	6755	True	2150.666667	3038	95.201000	1	2177	3	chr6D.!!$R1	2176
3	TraesCS7A01G290500	chr3D	589265756	589267715	1959	False	3031.000000	3031	94.699000	1	1947	1	chr3D.!!$F1	1946
4	TraesCS7A01G290500	chr7B	662722211	662724171	1960	True	3027.000000	3027	94.648000	1	1947	1	chr7B.!!$R1	1946
5	TraesCS7A01G290500	chr7B	663101658	663103604	1946	False	2948.000000	2948	94.037000	1	1947	1	chr7B.!!$F1	1946
6	TraesCS7A01G290500	chr5D	503236526	503243039	6513	True	2135.666667	3018	94.956333	1	2177	3	chr5D.!!$R2	2176
7	TraesCS7A01G290500	chr5D	503226209	503231226	5017	True	1251.000000	3003	95.327333	1	2177	3	chr5D.!!$R1	2176
8	TraesCS7A01G290500	chrUn	398828161	398829560	1399	True	2141.000000	2141	94.433000	1	1387	1	chrUn.!!$R1	1386
9	TraesCS7A01G290500	chrUn	216508351	216510617	2266	False	1675.500000	2976	94.959500	1	2177	2	chrUn.!!$F1	2176
10	TraesCS7A01G290500	chr1D	254384255	254387095	2840	False	1192.500000	2010	95.055500	1	2177	2	chr1D.!!$F1	2176

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
151	2366	0.103937	CTGAGCCAGGATCGAACTCC	59.896	60.0	0.0	0.0	35.37	3.85	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1960	14438	0.03831	TCGAGAGTCTCTGCCCTTCA	59.962	55.0	17.91	0.0	0.0	3.02	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
41	2256	0.699577	TGTTGTTCCCCTCCCAAGGA	60.700	55.000	0.00	0.00	46.67	3.36
66	2281	1.246649	TCTTACGCGTTACTCACCCA	58.753	50.000	20.78	0.00	0.00	4.51
69	2284	2.747396	TACGCGTTACTCACCCATTT	57.253	45.000	20.78	0.00	0.00	2.32
90	2305	1.750682	GCCACTGGAAACACCACTTCT	60.751	52.381	0.00	0.00	44.64	2.85
124	2339	1.073763	TGTGTTAAGCATGCCTCCAGT	59.926	47.619	15.66	0.00	0.00	4.00
151	2366	0.103937	CTGAGCCAGGATCGAACTCC	59.896	60.000	0.00	0.00	35.37	3.85
203	6667	6.038997	AGCTTCCTTATTCGTAGACAAAGT	57.961	37.500	0.00	0.00	34.32	2.66
232	6696	3.056536	GGAATTGTCTTTCCTTCCAAGGC	60.057	47.826	0.00	0.00	46.06	4.35
274	6738	6.560003	TTCAGATTATTAGCCTGGAGTTCA	57.440	37.500	0.00	0.00	0.00	3.18
300	6764	2.700897	CAGCAGTATAGCCAACCCTACT	59.299	50.000	0.00	0.00	34.23	2.57
391	6868	5.195756	ACATTGGGTTTAGGGATAATCAGGT	59.804	40.000	0.00	0.00	0.00	4.00
394	6871	4.791334	TGGGTTTAGGGATAATCAGGTTCA	59.209	41.667	0.00	0.00	0.00	3.18
399	6876	8.050930	GGTTTAGGGATAATCAGGTTCAAACTA	58.949	37.037	0.00	0.00	0.00	2.24
436	6913	1.000955	CAAGGTGACACTCTACCGCTT	59.999	52.381	5.39	0.00	41.85	4.68
493	6970	7.775561	AGAGAATTAACGAATCCTAAGGCAAAT	59.224	33.333	0.00	0.00	0.00	2.32
510	6987	2.813754	CAAATGGGCGAGAAACTCAAGA	59.186	45.455	0.00	0.00	0.00	3.02
517	6994	2.678324	CGAGAAACTCAAGACCACTCC	58.322	52.381	0.00	0.00	0.00	3.85
535	7012	0.909623	CCTCCTCCGGGCTTTCTTTA	59.090	55.000	0.00	0.00	0.00	1.85
540	7017	0.672401	TCCGGGCTTTCTTTACGCAG	60.672	55.000	0.00	0.00	0.00	5.18
599	7077	4.221924	TCAATTGTCAACTGGTCCTATCGA	59.778	41.667	5.13	0.00	0.00	3.59
629	7107	2.890808	TGACTATGGATTCGAGCCAC	57.109	50.000	10.80	0.66	38.44	5.01
643	7121	2.268076	GCCACCGCACATGGTTTCT	61.268	57.895	0.00	0.00	41.38	2.52
650	7128	4.987912	CACCGCACATGGTTTCTTAAAATT	59.012	37.500	0.00	0.00	41.38	1.82
691	7169	2.322355	ATCGAGCAGGTTTCCATGAG	57.678	50.000	0.00	0.00	0.00	2.90
706	7184	3.072915	TCCATGAGGAAGAGCTTGTTCAA	59.927	43.478	10.87	0.00	42.23	2.69
740	7218	3.003482	CGATACTGGTAGGAGAAGAACCG	59.997	52.174	0.00	0.00	35.98	4.44
770	7250	6.351966	CGGTATTCTTAAAGAAGAGGGGAAGT	60.352	42.308	0.00	0.00	42.66	3.01
821	7301	3.009723	CCTTCTTCTTGCGCCAAAGATA	58.990	45.455	10.60	0.99	36.12	1.98
833	7313	4.037446	GCGCCAAAGATATTACCATTTCCA	59.963	41.667	0.00	0.00	0.00	3.53
912	7392	1.774254	TGCCCTTTTCTTGAGACCTCA	59.226	47.619	0.00	0.00	37.91	3.86
967	7447	7.972832	ACACATACAAGAAAAAGGATAACGA	57.027	32.000	0.00	0.00	0.00	3.85
979	7459	1.275573	GGATAACGATAGCCCTCCCAC	59.724	57.143	0.00	0.00	42.67	4.61
993	7475	4.324331	GCCCTCCCACTAACTACTTCATTT	60.324	45.833	0.00	0.00	0.00	2.32
998	7480	7.066284	CCTCCCACTAACTACTTCATTTTCATG	59.934	40.741	0.00	0.00	0.00	3.07
1108	7590	9.868160	TGACCTCTATAGAAAGACTGATTCATA	57.132	33.333	3.57	0.00	0.00	2.15
1111	7593	7.753132	CCTCTATAGAAAGACTGATTCATACGC	59.247	40.741	3.57	0.00	0.00	4.42
1132	7614	3.495100	GCATCGATATGAGGACCCAACTT	60.495	47.826	0.00	0.00	34.84	2.66
1133	7615	4.708177	CATCGATATGAGGACCCAACTTT	58.292	43.478	0.00	0.00	34.84	2.66
1137	7619	5.188163	TCGATATGAGGACCCAACTTTGTTA	59.812	40.000	0.00	0.00	0.00	2.41
1151	7633	6.449698	CAACTTTGTTACATTGCCAGAATCT	58.550	36.000	0.00	0.00	0.00	2.40
1225	7707	2.549169	CTTCCTGCTGAGCCCCCTTC	62.549	65.000	0.23	0.00	0.00	3.46
1237	7719	2.764547	CCCTTCCTCCTCGGTCCC	60.765	72.222	0.00	0.00	0.00	4.46
1440	8494	1.868713	TCCCCGTTCTATTGCTACCA	58.131	50.000	0.00	0.00	0.00	3.25
1441	8495	2.404559	TCCCCGTTCTATTGCTACCAT	58.595	47.619	0.00	0.00	0.00	3.55
1452	8506	5.843969	TCTATTGCTACCATGGGTCTTATGA	59.156	40.000	18.09	2.47	37.09	2.15
1456	8510	5.765510	TGCTACCATGGGTCTTATGAAATT	58.234	37.500	18.09	0.00	37.09	1.82
1461	8515	6.434302	ACCATGGGTCTTATGAAATTGATCA	58.566	36.000	18.09	0.00	0.00	2.92
1500	9092	5.003160	CCTTCAACACAACATAGGTCATCA	58.997	41.667	0.00	0.00	0.00	3.07
1515	9107	5.634118	AGGTCATCAAAAAGATCTTGGACA	58.366	37.500	9.17	0.00	33.72	4.02
1541	9133	1.600413	CCAAAGCACGAAAGCCAGTTC	60.600	52.381	0.00	0.00	34.23	3.01
1583	9175	0.179045	AGTGCCTAACCGCATGGATC	60.179	55.000	0.00	0.00	41.70	3.36
1641	14028	4.038642	CGGGATTTTTCTTGGGAAGTTTCA	59.961	41.667	0.00	0.00	32.61	2.69
1694	14094	6.042638	TCATACAGAGGAAAAGGTTCTCTG	57.957	41.667	15.41	15.41	40.77	3.35
1707	14107	2.290641	GGTTCTCTGTTGATGCAAACGT	59.709	45.455	0.00	0.00	32.47	3.99
1747	14147	5.371176	GGGATAGAGGAAGAGGGAAAAATCT	59.629	44.000	0.00	0.00	0.00	2.40
1835	14235	8.981647	CAAATGAAGAAATGGAAACTCGAAAAT	58.018	29.630	0.00	0.00	0.00	1.82
1836	14236	9.546428	AAATGAAGAAATGGAAACTCGAAAATT	57.454	25.926	0.00	0.00	0.00	1.82
1849	14249	9.495754	GAAACTCGAAAATTATCCTTCTGATTG	57.504	33.333	0.00	0.00	34.76	2.67
1863	14263	5.942236	CCTTCTGATTGTCAAAGAATGAGGA	59.058	40.000	1.13	0.00	39.19	3.71
1865	14265	6.119240	TCTGATTGTCAAAGAATGAGGAGT	57.881	37.500	0.00	0.00	39.19	3.85
1880	14280	4.890988	TGAGGAGTAAGGGGATTGATACA	58.109	43.478	0.00	0.00	0.00	2.29
1951	14429	6.466885	TTGGTAAAAGAACAATTTCGGGAA	57.533	33.333	0.00	0.00	36.78	3.97
1960	14438	2.308866	ACAATTTCGGGAAGGAGTGGAT	59.691	45.455	0.00	0.00	0.00	3.41
1968	14446	0.620556	GAAGGAGTGGATGAAGGGCA	59.379	55.000	0.00	0.00	0.00	5.36
2021	14499	0.984230	AAGAATTGACCGAGGAGCCA	59.016	50.000	0.00	0.00	0.00	4.75
2036	14514	5.511373	CGAGGAGCCATATGAGGTGAAAATA	60.511	44.000	3.65	0.00	0.00	1.40
2044	14522	9.182214	GCCATATGAGGTGAAAATATCATGTAT	57.818	33.333	3.65	0.00	40.97	2.29
2060	14538	6.575244	TCATGTATGGTTCTGTAAAGGGAT	57.425	37.500	0.00	0.00	0.00	3.85
2085	14563	2.803956	AGGGTGACTTATCTGTCGACA	58.196	47.619	18.88	18.88	39.64	4.35
2097	14575	4.028852	TCTGTCGACATTTCCACTATCG	57.971	45.455	20.40	2.54	0.00	2.92

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
13	2228	3.028130	GAGGGGAACAACAACTGGAAAA	58.972	45.455	0.00	0.00	0.00	2.29
41	2256	2.294233	TGAGTAACGCGTAAGAACCTGT	59.706	45.455	14.46	0.00	43.02	4.00
66	2281	1.786937	TGGTGTTTCCAGTGGCAAAT	58.213	45.000	3.51	0.00	41.93	2.32
90	2305	4.788201	GCTTAACACATGCAAGTTGAACGA	60.788	41.667	7.16	0.00	0.00	3.85
151	2366	6.713903	AGTAATGCAACTATGAATCTCATGGG	59.286	38.462	0.00	0.00	39.34	4.00
248	6712	4.410228	ACTCCAGGCTAATAATCTGAAGCA	59.590	41.667	1.24	0.00	36.68	3.91
274	6738	1.065418	GTTGGCTATACTGCTGGTGGT	60.065	52.381	0.00	0.00	0.00	4.16
300	6764	3.678806	GCTTGTGGGATTGACGTGATAGA	60.679	47.826	0.00	0.00	0.00	1.98
391	6868	4.513692	CGTGGTGGAAGTCATTAGTTTGAA	59.486	41.667	0.00	0.00	0.00	2.69
394	6871	4.062991	GACGTGGTGGAAGTCATTAGTTT	58.937	43.478	0.00	0.00	33.58	2.66
399	6876	2.494059	CTTGACGTGGTGGAAGTCATT	58.506	47.619	0.00	0.00	41.88	2.57
436	6913	3.502857	GGGACGGGGAAGGGATATAACTA	60.503	52.174	0.00	0.00	0.00	2.24
493	6970	0.034896	GGTCTTGAGTTTCTCGCCCA	59.965	55.000	0.00	0.00	32.35	5.36
535	7012	9.944376	ATTATTTGACTATCCATAATACTGCGT	57.056	29.630	0.00	0.00	0.00	5.24
572	7049	3.753272	AGGACCAGTTGACAATTGAATCG	59.247	43.478	13.59	0.00	0.00	3.34
599	7077	7.792032	TCGAATCCATAGTCAATCCTACTTTT	58.208	34.615	0.00	0.00	0.00	2.27
629	7107	5.465056	ACAAATTTTAAGAAACCATGTGCGG	59.535	36.000	0.00	0.00	0.00	5.69
650	7128	9.830975	TCGATTTAGATCAGGAAAATCATACAA	57.169	29.630	16.38	2.33	38.81	2.41
664	7142	4.081142	TGGAAACCTGCTCGATTTAGATCA	60.081	41.667	0.00	0.00	32.33	2.92
691	7169	4.276926	AGAACATGTTGAACAAGCTCTTCC	59.723	41.667	17.58	0.00	0.00	3.46
697	7175	5.927030	TCGAATAGAACATGTTGAACAAGC	58.073	37.500	17.58	0.00	0.00	4.01
706	7184	6.776116	TCCTACCAGTATCGAATAGAACATGT	59.224	38.462	0.00	0.00	0.00	3.21
740	7218	6.274579	CCTCTTCTTTAAGAATACCGAGTCC	58.725	44.000	7.92	0.00	41.19	3.85
758	7236	3.583526	ACTTGGTTCTACTTCCCCTCTTC	59.416	47.826	0.00	0.00	0.00	2.87
770	7250	6.386927	ACCCATATCATCTTGACTTGGTTCTA	59.613	38.462	6.74	0.00	32.67	2.10
833	7313	3.076032	AGAAATGTAGCCCCAGTTCCTTT	59.924	43.478	9.09	0.00	39.56	3.11
912	7392	7.227156	AGAGAAGTAATGTGTCCTCATGTTTT	58.773	34.615	0.00	0.00	0.00	2.43
926	7406	9.653287	TTGTATGTGTTCCTAAGAGAAGTAATG	57.347	33.333	0.00	0.00	0.00	1.90
967	7447	3.995691	AGTAGTTAGTGGGAGGGCTAT	57.004	47.619	0.00	0.00	0.00	2.97
1041	7523	7.499232	GGCAAGAGGATAGCAAGTTCTAAATTA	59.501	37.037	0.00	0.00	0.00	1.40
1108	7590	0.603569	GGGTCCTCATATCGATGCGT	59.396	55.000	8.54	0.00	32.62	5.24
1111	7593	4.342862	AAGTTGGGTCCTCATATCGATG	57.657	45.455	8.54	0.00	0.00	3.84
1132	7614	7.148086	GGAACATAGATTCTGGCAATGTAACAA	60.148	37.037	1.01	0.00	30.85	2.83
1133	7615	6.318648	GGAACATAGATTCTGGCAATGTAACA	59.681	38.462	1.01	0.00	30.85	2.41
1137	7619	4.858850	TGGAACATAGATTCTGGCAATGT	58.141	39.130	0.00	0.00	32.32	2.71
1271	7753	3.433615	GTGAGTTCTTTCTTCCGTGATGG	59.566	47.826	0.00	0.00	40.09	3.51
1402	8456	6.113411	CGGGGAAAGTATACAGAAAAGACAT	58.887	40.000	5.50	0.00	0.00	3.06
1440	8494	8.222637	TGATCTGATCAATTTCATAAGACCCAT	58.777	33.333	17.56	0.00	36.11	4.00
1441	8495	7.576403	TGATCTGATCAATTTCATAAGACCCA	58.424	34.615	17.56	0.00	36.11	4.51
1461	8515	9.552695	TGTGTTGAAGGGATATCTATATGATCT	57.447	33.333	2.05	0.00	36.65	2.75
1500	9092	5.200483	TGGTGAGTTGTCCAAGATCTTTTT	58.800	37.500	4.86	0.00	0.00	1.94
1515	9107	1.065551	GCTTTCGTGCTTTGGTGAGTT	59.934	47.619	0.00	0.00	0.00	3.01
1541	9133	7.912250	CACTCTTCAAATAGGAATCCATTTTCG	59.088	37.037	0.61	0.00	0.00	3.46
1583	9175	2.093306	TGACGGGTTAATGTGAGCTG	57.907	50.000	0.00	0.00	0.00	4.24
1694	14094	3.619233	AGGTACAACGTTTGCATCAAC	57.381	42.857	0.00	0.00	0.00	3.18
1707	14107	6.217900	CCTCTATCCCTATCCTCTAGGTACAA	59.782	46.154	0.00	0.00	36.34	2.41
1786	14186	8.510358	TTGGAATATGGGATCTTCTATCTTGA	57.490	34.615	0.00	0.00	0.00	3.02
1787	14187	9.750783	ATTTGGAATATGGGATCTTCTATCTTG	57.249	33.333	0.00	0.00	0.00	3.02
1799	14199	7.131451	TCCATTTCTTCATTTGGAATATGGGA	58.869	34.615	0.00	0.00	38.31	4.37
1804	14204	8.243426	CGAGTTTCCATTTCTTCATTTGGAATA	58.757	33.333	4.24	0.00	45.14	1.75
1835	14235	9.170734	CTCATTCTTTGACAATCAGAAGGATAA	57.829	33.333	14.19	0.00	34.28	1.75
1836	14236	7.772292	CCTCATTCTTTGACAATCAGAAGGATA	59.228	37.037	14.19	0.00	34.28	2.59
1849	14249	4.225267	TCCCCTTACTCCTCATTCTTTGAC	59.775	45.833	0.00	0.00	0.00	3.18
1863	14263	6.903534	TCTTTCTCTGTATCAATCCCCTTACT	59.096	38.462	0.00	0.00	0.00	2.24
1865	14265	7.937700	ATCTTTCTCTGTATCAATCCCCTTA	57.062	36.000	0.00	0.00	0.00	2.69
1951	14429	0.252881	TCTGCCCTTCATCCACTCCT	60.253	55.000	0.00	0.00	0.00	3.69
1960	14438	0.038310	TCGAGAGTCTCTGCCCTTCA	59.962	55.000	17.91	0.00	0.00	3.02
1968	14446	2.476126	TTCCTCGTTCGAGAGTCTCT	57.524	50.000	21.39	0.70	36.56	3.10
2036	14514	6.575244	TCCCTTTACAGAACCATACATGAT	57.425	37.500	0.00	0.00	0.00	2.45
2044	14522	5.427481	CCCTTACTATCCCTTTACAGAACCA	59.573	44.000	0.00	0.00	0.00	3.67
2060	14538	5.587844	GTCGACAGATAAGTCACCCTTACTA	59.412	44.000	11.55	0.00	38.45	1.82
2085	14563	4.310022	TTTTGGGGTCGATAGTGGAAAT	57.690	40.909	0.00	0.00	37.40	2.17
2097	14575	1.686587	CAGAGTTGGGTTTTTGGGGTC	59.313	52.381	0.00	0.00	0.00	4.46

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.