Multiple sequence alignment - TraesCS7A01G287500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G287500 chr7A 100.000 4688 0 0 1 4688 342805611 342810298 0.000000e+00 8658.0
1 TraesCS7A01G287500 chr7A 98.256 172 2 1 1 172 188256611 188256441 2.740000e-77 300.0
2 TraesCS7A01G287500 chr7A 92.424 66 4 1 863 928 342806428 342806492 4.990000e-15 93.5
3 TraesCS7A01G287500 chr7A 92.424 66 4 1 818 882 342806473 342806538 4.990000e-15 93.5
4 TraesCS7A01G287500 chr7B 95.883 4178 105 22 166 4285 258900162 258904330 0.000000e+00 6700.0
5 TraesCS7A01G287500 chr7B 98.204 167 3 0 1 167 328938086 328938252 4.590000e-75 292.0
6 TraesCS7A01G287500 chr7B 90.909 66 5 1 818 882 258900880 258900945 2.320000e-13 87.9
7 TraesCS7A01G287500 chr7D 97.429 3851 61 11 166 3989 318811261 318815100 0.000000e+00 6529.0
8 TraesCS7A01G287500 chr7D 92.746 193 9 2 4093 4284 318820187 318820375 1.660000e-69 274.0
9 TraesCS7A01G287500 chr7D 92.784 97 4 1 3989 4085 318815129 318815222 2.280000e-28 137.0
10 TraesCS7A01G287500 chr7D 93.939 66 3 1 863 928 318811939 318812003 1.070000e-16 99.0
11 TraesCS7A01G287500 chr7D 92.424 66 4 1 818 882 318811984 318812049 4.990000e-15 93.5
12 TraesCS7A01G287500 chr7D 84.615 65 7 2 4293 4355 27467196 27467133 1.410000e-05 62.1
13 TraesCS7A01G287500 chr4B 96.089 179 5 2 1 178 580615260 580615083 1.650000e-74 291.0
14 TraesCS7A01G287500 chr4B 97.619 168 4 0 1 168 561747445 561747278 5.940000e-74 289.0
15 TraesCS7A01G287500 chr4B 97.619 168 4 0 1 168 579401408 579401575 5.940000e-74 289.0
16 TraesCS7A01G287500 chr4B 97.222 36 1 0 4297 4332 307579240 307579275 1.410000e-05 62.1
17 TraesCS7A01G287500 chr5B 97.619 168 4 0 1 168 610341852 610342019 5.940000e-74 289.0
18 TraesCS7A01G287500 chr5B 97.619 168 4 0 1 168 688022154 688021987 5.940000e-74 289.0
19 TraesCS7A01G287500 chr2B 96.045 177 7 0 1 177 234829681 234829857 5.940000e-74 289.0
20 TraesCS7A01G287500 chr2B 97.619 168 4 0 1 168 783866110 783866277 5.940000e-74 289.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G287500 chr7A 342805611 342810298 4687 False 2948.333333 8658 94.949333 1 4688 3 chr7A.!!$F1 4687
1 TraesCS7A01G287500 chr7B 258900162 258904330 4168 False 3393.950000 6700 93.396000 166 4285 2 chr7B.!!$F2 4119
2 TraesCS7A01G287500 chr7D 318811261 318815222 3961 False 1714.625000 6529 94.144000 166 4085 4 chr7D.!!$F2 3919

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
144 145 0.034574 TCCCAACCCATTCATGACCG 60.035 55.000 0.00 0.0 0.00 4.79 F
153 154 0.611618 ATTCATGACCGCCCTTGCAA 60.612 50.000 0.00 0.0 37.32 4.08 F
1243 1270 0.398318 GGAGTCAAAGGCTGAGGTGT 59.602 55.000 0.00 0.0 33.60 4.16 F
1317 1344 1.003812 ACTTGGTGGGCGCTTAATGTA 59.996 47.619 7.64 0.0 0.00 2.29 F
2792 2820 3.924114 TTCTGTTGGGAGTCTTTGTCA 57.076 42.857 0.00 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1243 1270 1.303074 CTTCTGAGCTGGCTGGCAA 60.303 57.895 5.14 0.0 34.17 4.52 R
1829 1857 4.631234 ACAACCAATAGGGAGAGGATACA 58.369 43.478 0.00 0.0 41.15 2.29 R
2531 2559 0.407139 AGAGCCTTTTGCCATCCAGT 59.593 50.000 0.00 0.0 42.71 4.00 R
2947 2975 5.486063 ACATGTAGGACACCTGGTTATACAA 59.514 40.000 0.00 0.0 35.60 2.41 R
4484 4547 0.035152 CTGACTATGGGCCAAGTGCA 60.035 55.000 21.00 16.9 43.89 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.880770 GGGTGGCCATTTGATTCGA 58.119 52.632 9.72 0.00 0.00 3.71
19 20 0.455815 GGGTGGCCATTTGATTCGAC 59.544 55.000 9.72 0.00 0.00 4.20
20 21 0.455815 GGTGGCCATTTGATTCGACC 59.544 55.000 9.72 0.00 0.00 4.79
21 22 0.098728 GTGGCCATTTGATTCGACCG 59.901 55.000 9.72 0.00 0.00 4.79
22 23 0.035915 TGGCCATTTGATTCGACCGA 60.036 50.000 0.00 0.00 0.00 4.69
23 24 1.308998 GGCCATTTGATTCGACCGAT 58.691 50.000 0.00 0.00 0.00 4.18
24 25 1.676006 GGCCATTTGATTCGACCGATT 59.324 47.619 0.00 0.00 0.00 3.34
25 26 2.099098 GGCCATTTGATTCGACCGATTT 59.901 45.455 0.00 0.00 0.00 2.17
26 27 3.108144 GCCATTTGATTCGACCGATTTG 58.892 45.455 0.00 0.00 0.00 2.32
27 28 3.694734 CCATTTGATTCGACCGATTTGG 58.305 45.455 0.00 0.00 46.41 3.28
36 37 4.832741 CCGATTTGGTTGGGTGGA 57.167 55.556 0.00 0.00 0.00 4.02
37 38 3.043998 CCGATTTGGTTGGGTGGAA 57.956 52.632 0.00 0.00 0.00 3.53
38 39 0.601057 CCGATTTGGTTGGGTGGAAC 59.399 55.000 0.00 0.00 0.00 3.62
39 40 0.239879 CGATTTGGTTGGGTGGAACG 59.760 55.000 0.00 0.00 38.12 3.95
40 41 0.601057 GATTTGGTTGGGTGGAACGG 59.399 55.000 0.00 0.00 38.12 4.44
41 42 0.105913 ATTTGGTTGGGTGGAACGGT 60.106 50.000 0.00 0.00 38.12 4.83
42 43 0.324460 TTTGGTTGGGTGGAACGGTT 60.324 50.000 0.00 0.00 38.12 4.44
43 44 0.752376 TTGGTTGGGTGGAACGGTTC 60.752 55.000 12.41 12.41 38.12 3.62
44 45 1.152922 GGTTGGGTGGAACGGTTCA 60.153 57.895 21.36 6.13 38.12 3.18
45 46 1.170290 GGTTGGGTGGAACGGTTCAG 61.170 60.000 21.36 0.00 38.12 3.02
46 47 1.527380 TTGGGTGGAACGGTTCAGC 60.527 57.895 21.36 1.11 38.12 4.26
47 48 2.112297 GGGTGGAACGGTTCAGCA 59.888 61.111 21.36 9.16 38.12 4.41
48 49 1.303317 GGGTGGAACGGTTCAGCAT 60.303 57.895 21.36 0.00 38.12 3.79
49 50 1.305930 GGGTGGAACGGTTCAGCATC 61.306 60.000 21.36 11.58 38.12 3.91
50 51 0.321653 GGTGGAACGGTTCAGCATCT 60.322 55.000 21.36 0.00 38.12 2.90
51 52 1.523758 GTGGAACGGTTCAGCATCTT 58.476 50.000 21.36 0.00 0.00 2.40
52 53 1.464997 GTGGAACGGTTCAGCATCTTC 59.535 52.381 21.36 3.29 0.00 2.87
53 54 1.071542 TGGAACGGTTCAGCATCTTCA 59.928 47.619 21.36 5.77 0.00 3.02
54 55 2.290260 TGGAACGGTTCAGCATCTTCAT 60.290 45.455 21.36 0.00 0.00 2.57
55 56 2.096496 GGAACGGTTCAGCATCTTCATG 59.904 50.000 21.36 0.00 0.00 3.07
56 57 1.742761 ACGGTTCAGCATCTTCATGG 58.257 50.000 0.00 0.00 0.00 3.66
57 58 0.379669 CGGTTCAGCATCTTCATGGC 59.620 55.000 0.00 0.00 0.00 4.40
58 59 1.466856 GGTTCAGCATCTTCATGGCA 58.533 50.000 0.00 0.00 0.00 4.92
59 60 2.029623 GGTTCAGCATCTTCATGGCAT 58.970 47.619 0.00 0.00 0.00 4.40
60 61 3.216800 GGTTCAGCATCTTCATGGCATA 58.783 45.455 0.00 0.00 0.00 3.14
61 62 3.825014 GGTTCAGCATCTTCATGGCATAT 59.175 43.478 0.00 0.00 0.00 1.78
62 63 4.280174 GGTTCAGCATCTTCATGGCATATT 59.720 41.667 0.00 0.00 0.00 1.28
63 64 5.221382 GGTTCAGCATCTTCATGGCATATTT 60.221 40.000 0.00 0.00 0.00 1.40
64 65 6.278363 GTTCAGCATCTTCATGGCATATTTT 58.722 36.000 0.00 0.00 0.00 1.82
65 66 6.080648 TCAGCATCTTCATGGCATATTTTC 57.919 37.500 0.00 0.00 0.00 2.29
66 67 5.831525 TCAGCATCTTCATGGCATATTTTCT 59.168 36.000 0.00 0.00 0.00 2.52
67 68 6.322969 TCAGCATCTTCATGGCATATTTTCTT 59.677 34.615 0.00 0.00 0.00 2.52
68 69 6.984474 CAGCATCTTCATGGCATATTTTCTTT 59.016 34.615 0.00 0.00 0.00 2.52
69 70 7.494625 CAGCATCTTCATGGCATATTTTCTTTT 59.505 33.333 0.00 0.00 0.00 2.27
70 71 8.044908 AGCATCTTCATGGCATATTTTCTTTTT 58.955 29.630 0.00 0.00 0.00 1.94
94 95 3.559238 GTTCGAACCATTCATGTGCTT 57.441 42.857 17.68 0.00 0.00 3.91
95 96 3.900941 GTTCGAACCATTCATGTGCTTT 58.099 40.909 17.68 0.00 0.00 3.51
96 97 5.041951 GTTCGAACCATTCATGTGCTTTA 57.958 39.130 17.68 0.00 0.00 1.85
97 98 5.640732 GTTCGAACCATTCATGTGCTTTAT 58.359 37.500 17.68 0.00 0.00 1.40
98 99 6.781138 GTTCGAACCATTCATGTGCTTTATA 58.219 36.000 17.68 0.00 0.00 0.98
99 100 6.993786 TCGAACCATTCATGTGCTTTATAA 57.006 33.333 0.00 0.00 0.00 0.98
100 101 6.781138 TCGAACCATTCATGTGCTTTATAAC 58.219 36.000 0.00 0.00 0.00 1.89
101 102 5.971202 CGAACCATTCATGTGCTTTATAACC 59.029 40.000 0.00 0.00 0.00 2.85
102 103 6.404184 CGAACCATTCATGTGCTTTATAACCA 60.404 38.462 0.00 0.00 0.00 3.67
103 104 6.849085 ACCATTCATGTGCTTTATAACCAA 57.151 33.333 0.00 0.00 0.00 3.67
104 105 7.238486 ACCATTCATGTGCTTTATAACCAAA 57.762 32.000 0.00 0.00 0.00 3.28
105 106 7.096551 ACCATTCATGTGCTTTATAACCAAAC 58.903 34.615 0.00 0.00 0.00 2.93
106 107 7.095910 CCATTCATGTGCTTTATAACCAAACA 58.904 34.615 0.00 0.00 0.00 2.83
107 108 7.765360 CCATTCATGTGCTTTATAACCAAACAT 59.235 33.333 0.00 0.00 0.00 2.71
108 109 8.597227 CATTCATGTGCTTTATAACCAAACATG 58.403 33.333 16.42 16.42 42.90 3.21
109 110 7.225784 TCATGTGCTTTATAACCAAACATGT 57.774 32.000 19.24 0.00 42.41 3.21
110 111 7.665690 TCATGTGCTTTATAACCAAACATGTT 58.334 30.769 19.24 4.92 42.41 2.71
111 112 8.147058 TCATGTGCTTTATAACCAAACATGTTT 58.853 29.630 18.13 18.13 42.41 2.83
112 113 9.416794 CATGTGCTTTATAACCAAACATGTTTA 57.583 29.630 22.87 8.67 38.90 2.01
114 115 9.988815 TGTGCTTTATAACCAAACATGTTTATT 57.011 25.926 22.87 20.40 0.00 1.40
134 135 2.366640 TTTTGAACGATCCCAACCCA 57.633 45.000 0.00 0.00 0.00 4.51
135 136 2.595750 TTTGAACGATCCCAACCCAT 57.404 45.000 0.00 0.00 0.00 4.00
136 137 2.595750 TTGAACGATCCCAACCCATT 57.404 45.000 0.00 0.00 0.00 3.16
137 138 2.122783 TGAACGATCCCAACCCATTC 57.877 50.000 0.00 0.00 0.00 2.67
138 139 1.352687 TGAACGATCCCAACCCATTCA 59.647 47.619 0.00 0.00 0.00 2.57
139 140 2.025416 TGAACGATCCCAACCCATTCAT 60.025 45.455 0.00 0.00 0.00 2.57
140 141 2.057137 ACGATCCCAACCCATTCATG 57.943 50.000 0.00 0.00 0.00 3.07
141 142 1.563879 ACGATCCCAACCCATTCATGA 59.436 47.619 0.00 0.00 0.00 3.07
142 143 1.949525 CGATCCCAACCCATTCATGAC 59.050 52.381 0.00 0.00 0.00 3.06
143 144 2.310538 GATCCCAACCCATTCATGACC 58.689 52.381 0.00 0.00 0.00 4.02
144 145 0.034574 TCCCAACCCATTCATGACCG 60.035 55.000 0.00 0.00 0.00 4.79
145 146 1.666209 CCCAACCCATTCATGACCGC 61.666 60.000 0.00 0.00 0.00 5.68
146 147 1.666209 CCAACCCATTCATGACCGCC 61.666 60.000 0.00 0.00 0.00 6.13
147 148 1.379843 AACCCATTCATGACCGCCC 60.380 57.895 0.00 0.00 0.00 6.13
148 149 1.863155 AACCCATTCATGACCGCCCT 61.863 55.000 0.00 0.00 0.00 5.19
149 150 1.076777 CCCATTCATGACCGCCCTT 60.077 57.895 0.00 0.00 0.00 3.95
150 151 1.386525 CCCATTCATGACCGCCCTTG 61.387 60.000 0.00 0.00 0.00 3.61
151 152 1.434696 CATTCATGACCGCCCTTGC 59.565 57.895 0.00 0.00 0.00 4.01
152 153 1.001020 ATTCATGACCGCCCTTGCA 60.001 52.632 0.00 0.00 37.32 4.08
153 154 0.611618 ATTCATGACCGCCCTTGCAA 60.612 50.000 0.00 0.00 37.32 4.08
154 155 1.523154 TTCATGACCGCCCTTGCAAC 61.523 55.000 0.00 0.00 37.32 4.17
155 156 2.676471 ATGACCGCCCTTGCAACC 60.676 61.111 0.00 0.00 37.32 3.77
156 157 3.505790 ATGACCGCCCTTGCAACCA 62.506 57.895 0.00 0.00 37.32 3.67
157 158 2.909965 GACCGCCCTTGCAACCAA 60.910 61.111 0.00 0.00 37.32 3.67
158 159 2.443016 ACCGCCCTTGCAACCAAA 60.443 55.556 0.00 0.00 37.32 3.28
159 160 2.028925 CCGCCCTTGCAACCAAAC 59.971 61.111 0.00 0.00 37.32 2.93
160 161 2.354539 CGCCCTTGCAACCAAACG 60.355 61.111 0.00 0.00 37.32 3.60
161 162 2.661537 GCCCTTGCAACCAAACGC 60.662 61.111 0.00 0.00 37.47 4.84
162 163 2.811101 CCCTTGCAACCAAACGCA 59.189 55.556 0.00 0.00 36.05 5.24
163 164 1.591327 CCCTTGCAACCAAACGCAC 60.591 57.895 0.00 0.00 38.00 5.34
164 165 1.591327 CCTTGCAACCAAACGCACC 60.591 57.895 0.00 0.00 38.00 5.01
216 217 8.784994 TCAAGTAGTAGTATAGCAATGTCTAGC 58.215 37.037 0.00 0.00 0.00 3.42
243 245 3.133691 GTGATCATCATGCACGTACCAT 58.866 45.455 0.00 0.00 0.00 3.55
321 323 7.706159 ACGTTTCATGGATATGTACTACGTAA 58.294 34.615 0.00 0.00 36.81 3.18
322 324 7.859377 ACGTTTCATGGATATGTACTACGTAAG 59.141 37.037 0.00 0.00 36.81 2.34
811 838 3.641436 AGATTGTTTTGGGGGAAGTTGTC 59.359 43.478 0.00 0.00 0.00 3.18
1138 1165 4.282496 CCTTAGACCACTCTACCTCACAT 58.718 47.826 0.00 0.00 0.00 3.21
1243 1270 0.398318 GGAGTCAAAGGCTGAGGTGT 59.602 55.000 0.00 0.00 33.60 4.16
1317 1344 1.003812 ACTTGGTGGGCGCTTAATGTA 59.996 47.619 7.64 0.00 0.00 2.29
1538 1565 6.367686 TCTGTTGATGGAAATCATGAATCG 57.632 37.500 0.00 0.00 35.97 3.34
1829 1857 9.286170 GTAAAATCCTCCTAAGTTGTTTCTCTT 57.714 33.333 0.00 0.00 0.00 2.85
2151 2179 8.693120 TTGTGTAAATTAGGTGAATGGTTACA 57.307 30.769 0.00 0.00 32.20 2.41
2152 2180 8.871629 TGTGTAAATTAGGTGAATGGTTACAT 57.128 30.769 0.00 0.00 35.06 2.29
2603 2631 7.329471 GGTAAGCAGGAAAAATCAAGAATTCAC 59.671 37.037 8.44 0.00 0.00 3.18
2792 2820 3.924114 TTCTGTTGGGAGTCTTTGTCA 57.076 42.857 0.00 0.00 0.00 3.58
2947 2975 2.755650 CACAGAGCGTTTTCTACCACT 58.244 47.619 0.00 0.00 0.00 4.00
3610 3643 7.730364 TGATTCTTCTTCCTTCAGTGTTTAC 57.270 36.000 0.00 0.00 0.00 2.01
3694 3727 3.160679 AGGCAAAGCAGTGAGGTTTAT 57.839 42.857 0.00 0.00 45.55 1.40
3695 3728 3.500343 AGGCAAAGCAGTGAGGTTTATT 58.500 40.909 0.00 0.00 45.55 1.40
3879 3912 7.639113 TTGTTAAATCACAAACTGAACTCCT 57.361 32.000 0.00 0.00 33.60 3.69
3935 3968 2.086869 ACTGCATGGAAATTCGTCTGG 58.913 47.619 0.00 0.00 0.00 3.86
3968 4001 3.718815 CTGGAAAGTAACGATAGCCCTC 58.281 50.000 0.00 0.00 42.67 4.30
4104 4166 9.366216 AGGTTGTTTGAAGTTTTTGTAAATCTC 57.634 29.630 0.00 0.00 0.00 2.75
4109 4171 8.944927 GTTTGAAGTTTTTGTAAATCTCTCGTC 58.055 33.333 0.00 0.00 0.00 4.20
4192 4254 4.646040 CCATGATCTTGGGTGAAGCAAATA 59.354 41.667 17.94 0.00 32.80 1.40
4285 4348 5.684704 ACCATGGACATGTCTATTCGAATT 58.315 37.500 24.50 0.00 37.11 2.17
4286 4349 5.760253 ACCATGGACATGTCTATTCGAATTC 59.240 40.000 24.50 5.59 37.11 2.17
4287 4350 5.994054 CCATGGACATGTCTATTCGAATTCT 59.006 40.000 24.50 0.00 37.11 2.40
4288 4351 7.154656 CCATGGACATGTCTATTCGAATTCTA 58.845 38.462 24.50 4.14 37.11 2.10
4289 4352 7.657354 CCATGGACATGTCTATTCGAATTCTAA 59.343 37.037 24.50 0.00 37.11 2.10
4290 4353 8.491152 CATGGACATGTCTATTCGAATTCTAAC 58.509 37.037 24.50 9.90 34.23 2.34
4291 4354 6.984474 TGGACATGTCTATTCGAATTCTAACC 59.016 38.462 24.50 10.26 0.00 2.85
4292 4355 7.147724 TGGACATGTCTATTCGAATTCTAACCT 60.148 37.037 24.50 0.67 0.00 3.50
4293 4356 8.358148 GGACATGTCTATTCGAATTCTAACCTA 58.642 37.037 24.50 0.00 0.00 3.08
4294 4357 9.915629 GACATGTCTATTCGAATTCTAACCTAT 57.084 33.333 17.19 0.00 0.00 2.57
4317 4380 1.751563 GAGCATCTCCACTAGGCCC 59.248 63.158 0.00 0.00 33.74 5.80
4318 4381 1.763546 GAGCATCTCCACTAGGCCCC 61.764 65.000 0.00 0.00 33.74 5.80
4319 4382 2.823758 GCATCTCCACTAGGCCCCC 61.824 68.421 0.00 0.00 33.74 5.40
4320 4383 1.074167 CATCTCCACTAGGCCCCCT 60.074 63.158 0.00 0.00 37.71 4.79
4321 4384 0.191064 CATCTCCACTAGGCCCCCTA 59.809 60.000 0.00 0.00 34.61 3.53
4322 4385 0.949582 ATCTCCACTAGGCCCCCTAA 59.050 55.000 0.00 0.00 35.49 2.69
4323 4386 0.264955 TCTCCACTAGGCCCCCTAAG 59.735 60.000 0.00 0.00 35.49 2.18
4324 4387 0.264955 CTCCACTAGGCCCCCTAAGA 59.735 60.000 0.00 0.00 35.49 2.10
4325 4388 0.720232 TCCACTAGGCCCCCTAAGAA 59.280 55.000 0.00 0.00 35.49 2.52
4326 4389 1.132500 CCACTAGGCCCCCTAAGAAG 58.868 60.000 0.00 0.00 35.49 2.85
4327 4390 0.470341 CACTAGGCCCCCTAAGAAGC 59.530 60.000 0.00 0.00 35.49 3.86
4328 4391 0.694783 ACTAGGCCCCCTAAGAAGCC 60.695 60.000 0.00 0.00 46.13 4.35
4330 4393 3.822035 GGCCCCCTAAGAAGCCCC 61.822 72.222 0.00 0.00 39.60 5.80
4331 4394 3.822035 GCCCCCTAAGAAGCCCCC 61.822 72.222 0.00 0.00 0.00 5.40
4332 4395 2.286885 CCCCCTAAGAAGCCCCCA 60.287 66.667 0.00 0.00 0.00 4.96
4333 4396 2.386935 CCCCCTAAGAAGCCCCCAG 61.387 68.421 0.00 0.00 0.00 4.45
4334 4397 2.386935 CCCCTAAGAAGCCCCCAGG 61.387 68.421 0.00 0.00 0.00 4.45
4335 4398 1.307866 CCCTAAGAAGCCCCCAGGA 60.308 63.158 0.00 0.00 33.47 3.86
4336 4399 1.636769 CCCTAAGAAGCCCCCAGGAC 61.637 65.000 0.00 0.00 33.47 3.85
4337 4400 1.636769 CCTAAGAAGCCCCCAGGACC 61.637 65.000 0.00 0.00 33.47 4.46
4338 4401 0.914417 CTAAGAAGCCCCCAGGACCA 60.914 60.000 0.00 0.00 33.47 4.02
4339 4402 1.205460 TAAGAAGCCCCCAGGACCAC 61.205 60.000 0.00 0.00 33.47 4.16
4340 4403 2.936032 GAAGCCCCCAGGACCACT 60.936 66.667 0.00 0.00 33.47 4.00
4341 4404 2.452491 AAGCCCCCAGGACCACTT 60.452 61.111 0.00 0.00 33.47 3.16
4342 4405 2.081585 GAAGCCCCCAGGACCACTTT 62.082 60.000 0.00 0.00 33.47 2.66
4343 4406 1.664956 AAGCCCCCAGGACCACTTTT 61.665 55.000 0.00 0.00 33.47 2.27
4344 4407 1.152333 GCCCCCAGGACCACTTTTT 60.152 57.895 0.00 0.00 33.47 1.94
4345 4408 0.113580 GCCCCCAGGACCACTTTTTA 59.886 55.000 0.00 0.00 33.47 1.52
4346 4409 1.891011 GCCCCCAGGACCACTTTTTAG 60.891 57.143 0.00 0.00 33.47 1.85
4347 4410 1.427753 CCCCCAGGACCACTTTTTAGT 59.572 52.381 0.00 0.00 33.47 2.24
4348 4411 2.554564 CCCCCAGGACCACTTTTTAGTC 60.555 54.545 0.00 0.00 33.47 2.59
4349 4412 2.423577 CCCAGGACCACTTTTTAGTCG 58.576 52.381 0.00 0.00 0.00 4.18
4350 4413 1.804748 CCAGGACCACTTTTTAGTCGC 59.195 52.381 0.00 0.00 0.00 5.19
4351 4414 1.804748 CAGGACCACTTTTTAGTCGCC 59.195 52.381 0.00 0.00 0.00 5.54
4352 4415 0.794473 GGACCACTTTTTAGTCGCCG 59.206 55.000 0.00 0.00 0.00 6.46
4353 4416 0.794473 GACCACTTTTTAGTCGCCGG 59.206 55.000 0.00 0.00 0.00 6.13
4354 4417 1.232621 ACCACTTTTTAGTCGCCGGC 61.233 55.000 19.07 19.07 0.00 6.13
4355 4418 1.231958 CCACTTTTTAGTCGCCGGCA 61.232 55.000 28.98 11.20 0.00 5.69
4356 4419 0.165944 CACTTTTTAGTCGCCGGCAG 59.834 55.000 28.98 19.33 0.00 4.85
4357 4420 0.250166 ACTTTTTAGTCGCCGGCAGT 60.250 50.000 28.98 16.71 0.00 4.40
4358 4421 1.001181 ACTTTTTAGTCGCCGGCAGTA 59.999 47.619 28.98 17.20 0.00 2.74
4359 4422 2.070783 CTTTTTAGTCGCCGGCAGTAA 58.929 47.619 28.98 21.65 0.00 2.24
4360 4423 2.166821 TTTTAGTCGCCGGCAGTAAA 57.833 45.000 28.98 25.44 0.00 2.01
4361 4424 2.166821 TTTAGTCGCCGGCAGTAAAA 57.833 45.000 28.98 17.62 0.00 1.52
4362 4425 2.166821 TTAGTCGCCGGCAGTAAAAA 57.833 45.000 28.98 9.54 0.00 1.94
4363 4426 2.389962 TAGTCGCCGGCAGTAAAAAT 57.610 45.000 28.98 5.70 0.00 1.82
4364 4427 2.389962 AGTCGCCGGCAGTAAAAATA 57.610 45.000 28.98 0.00 0.00 1.40
4365 4428 2.914059 AGTCGCCGGCAGTAAAAATAT 58.086 42.857 28.98 0.00 0.00 1.28
4366 4429 2.612212 AGTCGCCGGCAGTAAAAATATG 59.388 45.455 28.98 5.10 0.00 1.78
4367 4430 2.353579 GTCGCCGGCAGTAAAAATATGT 59.646 45.455 28.98 0.00 0.00 2.29
4368 4431 2.610374 TCGCCGGCAGTAAAAATATGTC 59.390 45.455 28.98 0.00 0.00 3.06
4369 4432 2.286772 CGCCGGCAGTAAAAATATGTCC 60.287 50.000 28.98 0.00 0.00 4.02
4370 4433 2.034179 GCCGGCAGTAAAAATATGTCCC 59.966 50.000 24.80 0.00 0.00 4.46
4371 4434 3.283751 CCGGCAGTAAAAATATGTCCCA 58.716 45.455 0.00 0.00 0.00 4.37
4372 4435 3.888930 CCGGCAGTAAAAATATGTCCCAT 59.111 43.478 0.00 0.00 0.00 4.00
4373 4436 5.067273 CCGGCAGTAAAAATATGTCCCATA 58.933 41.667 0.00 0.00 0.00 2.74
4374 4437 5.710099 CCGGCAGTAAAAATATGTCCCATAT 59.290 40.000 0.00 0.00 0.00 1.78
4375 4438 6.349280 CCGGCAGTAAAAATATGTCCCATATG 60.349 42.308 0.00 0.00 0.00 1.78
4376 4439 6.206634 CGGCAGTAAAAATATGTCCCATATGT 59.793 38.462 1.24 0.00 0.00 2.29
4377 4440 7.573096 CGGCAGTAAAAATATGTCCCATATGTC 60.573 40.741 1.24 0.00 0.00 3.06
4378 4441 7.309194 GGCAGTAAAAATATGTCCCATATGTCC 60.309 40.741 1.24 0.00 0.00 4.02
4379 4442 7.309194 GCAGTAAAAATATGTCCCATATGTCCC 60.309 40.741 1.24 0.00 0.00 4.46
4380 4443 7.723616 CAGTAAAAATATGTCCCATATGTCCCA 59.276 37.037 1.24 0.00 0.00 4.37
4381 4444 7.944554 AGTAAAAATATGTCCCATATGTCCCAG 59.055 37.037 1.24 0.00 0.00 4.45
4382 4445 4.307032 AATATGTCCCATATGTCCCAGC 57.693 45.455 1.24 0.00 0.00 4.85
4383 4446 0.773644 ATGTCCCATATGTCCCAGCC 59.226 55.000 1.24 0.00 0.00 4.85
4384 4447 0.623031 TGTCCCATATGTCCCAGCCA 60.623 55.000 1.24 0.00 0.00 4.75
4385 4448 0.773644 GTCCCATATGTCCCAGCCAT 59.226 55.000 1.24 0.00 0.00 4.40
4386 4449 0.773014 TCCCATATGTCCCAGCCATG 59.227 55.000 1.24 0.00 0.00 3.66
4387 4450 0.479815 CCCATATGTCCCAGCCATGT 59.520 55.000 1.24 0.00 0.00 3.21
4388 4451 1.546323 CCCATATGTCCCAGCCATGTC 60.546 57.143 1.24 0.00 0.00 3.06
4389 4452 1.546323 CCATATGTCCCAGCCATGTCC 60.546 57.143 1.24 0.00 0.00 4.02
4390 4453 1.422781 CATATGTCCCAGCCATGTCCT 59.577 52.381 0.00 0.00 0.00 3.85
4391 4454 1.131638 TATGTCCCAGCCATGTCCTC 58.868 55.000 0.00 0.00 0.00 3.71
4392 4455 0.915872 ATGTCCCAGCCATGTCCTCA 60.916 55.000 0.00 0.00 0.00 3.86
4393 4456 1.222936 GTCCCAGCCATGTCCTCAG 59.777 63.158 0.00 0.00 0.00 3.35
4394 4457 1.080907 TCCCAGCCATGTCCTCAGA 59.919 57.895 0.00 0.00 0.00 3.27
4395 4458 1.222936 CCCAGCCATGTCCTCAGAC 59.777 63.158 0.00 0.00 43.83 3.51
4396 4459 1.270414 CCCAGCCATGTCCTCAGACT 61.270 60.000 0.00 0.00 43.91 3.24
4397 4460 0.177604 CCAGCCATGTCCTCAGACTC 59.822 60.000 0.00 0.00 43.91 3.36
4398 4461 1.193323 CAGCCATGTCCTCAGACTCT 58.807 55.000 0.00 0.00 43.91 3.24
4399 4462 1.136695 CAGCCATGTCCTCAGACTCTC 59.863 57.143 0.00 0.00 43.91 3.20
4400 4463 0.102120 GCCATGTCCTCAGACTCTCG 59.898 60.000 0.00 0.00 43.91 4.04
4401 4464 1.756430 CCATGTCCTCAGACTCTCGA 58.244 55.000 0.00 0.00 43.91 4.04
4402 4465 2.305928 CCATGTCCTCAGACTCTCGAT 58.694 52.381 0.00 0.00 43.91 3.59
4403 4466 2.692557 CCATGTCCTCAGACTCTCGATT 59.307 50.000 0.00 0.00 43.91 3.34
4404 4467 3.131933 CCATGTCCTCAGACTCTCGATTT 59.868 47.826 0.00 0.00 43.91 2.17
4405 4468 4.382470 CCATGTCCTCAGACTCTCGATTTT 60.382 45.833 0.00 0.00 43.91 1.82
4406 4469 4.442375 TGTCCTCAGACTCTCGATTTTC 57.558 45.455 0.00 0.00 43.91 2.29
4407 4470 3.119814 TGTCCTCAGACTCTCGATTTTCG 60.120 47.826 0.00 0.00 43.91 3.46
4408 4471 2.159366 TCCTCAGACTCTCGATTTTCGC 60.159 50.000 0.00 0.00 40.21 4.70
4409 4472 2.189342 CTCAGACTCTCGATTTTCGCC 58.811 52.381 0.00 0.00 40.21 5.54
4410 4473 0.917259 CAGACTCTCGATTTTCGCCG 59.083 55.000 0.00 0.00 40.21 6.46
4411 4474 0.179134 AGACTCTCGATTTTCGCCGG 60.179 55.000 0.00 0.00 40.21 6.13
4412 4475 0.179145 GACTCTCGATTTTCGCCGGA 60.179 55.000 5.05 0.00 40.21 5.14
4413 4476 0.460311 ACTCTCGATTTTCGCCGGAT 59.540 50.000 5.05 0.00 40.21 4.18
4414 4477 1.134788 ACTCTCGATTTTCGCCGGATT 60.135 47.619 5.05 0.00 40.21 3.01
4415 4478 1.933853 CTCTCGATTTTCGCCGGATTT 59.066 47.619 5.05 0.00 40.21 2.17
4416 4479 2.351726 CTCTCGATTTTCGCCGGATTTT 59.648 45.455 5.05 0.00 40.21 1.82
4417 4480 2.095213 TCTCGATTTTCGCCGGATTTTG 59.905 45.455 5.05 0.00 40.21 2.44
4418 4481 0.913876 CGATTTTCGCCGGATTTTGC 59.086 50.000 5.05 0.00 31.14 3.68
4419 4482 1.730772 CGATTTTCGCCGGATTTTGCA 60.731 47.619 5.05 0.00 31.14 4.08
4420 4483 2.333014 GATTTTCGCCGGATTTTGCAA 58.667 42.857 5.05 0.00 0.00 4.08
4421 4484 2.225068 TTTTCGCCGGATTTTGCAAA 57.775 40.000 5.05 8.05 0.00 3.68
4422 4485 2.225068 TTTCGCCGGATTTTGCAAAA 57.775 40.000 25.76 25.76 0.00 2.44
4423 4486 2.225068 TTCGCCGGATTTTGCAAAAA 57.775 40.000 27.10 11.93 0.00 1.94
4424 4487 1.492720 TCGCCGGATTTTGCAAAAAC 58.507 45.000 27.10 23.56 0.00 2.43
4425 4488 1.067821 TCGCCGGATTTTGCAAAAACT 59.932 42.857 27.10 13.01 0.00 2.66
4426 4489 2.293677 TCGCCGGATTTTGCAAAAACTA 59.706 40.909 27.10 6.21 0.00 2.24
4427 4490 2.661195 CGCCGGATTTTGCAAAAACTAG 59.339 45.455 27.10 20.14 0.00 2.57
4428 4491 2.411748 GCCGGATTTTGCAAAAACTAGC 59.588 45.455 27.10 23.65 0.00 3.42
4429 4492 3.648009 CCGGATTTTGCAAAAACTAGCA 58.352 40.909 27.10 4.25 39.32 3.49
4430 4493 3.428534 CCGGATTTTGCAAAAACTAGCAC 59.571 43.478 27.10 11.08 41.05 4.40
4431 4494 3.428534 CGGATTTTGCAAAAACTAGCACC 59.571 43.478 27.10 18.23 41.05 5.01
4432 4495 3.428534 GGATTTTGCAAAAACTAGCACCG 59.571 43.478 27.10 0.00 41.05 4.94
4433 4496 2.500509 TTTGCAAAAACTAGCACCGG 57.499 45.000 10.02 0.00 41.05 5.28
4434 4497 0.671251 TTGCAAAAACTAGCACCGGG 59.329 50.000 6.32 0.00 41.05 5.73
4435 4498 0.179015 TGCAAAAACTAGCACCGGGA 60.179 50.000 6.32 0.00 35.51 5.14
4436 4499 0.240145 GCAAAAACTAGCACCGGGAC 59.760 55.000 6.32 0.00 0.00 4.46
4437 4500 1.892209 CAAAAACTAGCACCGGGACT 58.108 50.000 6.32 4.83 0.00 3.85
4438 4501 1.804748 CAAAAACTAGCACCGGGACTC 59.195 52.381 6.32 0.00 0.00 3.36
4439 4502 1.053424 AAAACTAGCACCGGGACTCA 58.947 50.000 6.32 0.00 0.00 3.41
4440 4503 1.276622 AAACTAGCACCGGGACTCAT 58.723 50.000 6.32 0.00 0.00 2.90
4441 4504 0.537188 AACTAGCACCGGGACTCATG 59.463 55.000 6.32 0.00 0.00 3.07
4442 4505 1.227380 CTAGCACCGGGACTCATGC 60.227 63.158 6.32 5.18 38.39 4.06
4443 4506 1.960040 CTAGCACCGGGACTCATGCA 61.960 60.000 14.13 0.00 40.63 3.96
4444 4507 1.960040 TAGCACCGGGACTCATGCAG 61.960 60.000 14.13 0.00 40.63 4.41
4445 4508 2.981302 CACCGGGACTCATGCAGA 59.019 61.111 6.32 0.00 0.00 4.26
4446 4509 1.296392 CACCGGGACTCATGCAGAA 59.704 57.895 6.32 0.00 0.00 3.02
4447 4510 1.021390 CACCGGGACTCATGCAGAAC 61.021 60.000 6.32 0.00 0.00 3.01
4448 4511 1.450312 CCGGGACTCATGCAGAACC 60.450 63.158 0.00 0.00 0.00 3.62
4449 4512 1.450312 CGGGACTCATGCAGAACCC 60.450 63.158 0.00 5.48 38.23 4.11
4450 4513 1.685224 GGGACTCATGCAGAACCCA 59.315 57.895 15.93 0.00 39.98 4.51
4451 4514 0.393537 GGGACTCATGCAGAACCCAG 60.394 60.000 15.93 1.67 39.98 4.45
4452 4515 0.326264 GGACTCATGCAGAACCCAGT 59.674 55.000 0.00 0.00 0.00 4.00
4453 4516 1.555075 GGACTCATGCAGAACCCAGTA 59.445 52.381 0.00 0.00 0.00 2.74
4454 4517 2.622436 GACTCATGCAGAACCCAGTAC 58.378 52.381 0.00 0.00 0.00 2.73
4455 4518 1.977854 ACTCATGCAGAACCCAGTACA 59.022 47.619 0.00 0.00 0.00 2.90
4456 4519 2.573462 ACTCATGCAGAACCCAGTACAT 59.427 45.455 0.00 0.00 0.00 2.29
4457 4520 3.201290 CTCATGCAGAACCCAGTACATC 58.799 50.000 0.00 0.00 0.00 3.06
4458 4521 1.935873 CATGCAGAACCCAGTACATCG 59.064 52.381 0.00 0.00 0.00 3.84
4459 4522 0.249120 TGCAGAACCCAGTACATCGG 59.751 55.000 0.00 0.00 0.00 4.18
4476 4539 3.400188 GGGGGCGGAGAGAGAAAA 58.600 61.111 0.00 0.00 0.00 2.29
4477 4540 1.915983 GGGGGCGGAGAGAGAAAAT 59.084 57.895 0.00 0.00 0.00 1.82
4478 4541 0.256177 GGGGGCGGAGAGAGAAAATT 59.744 55.000 0.00 0.00 0.00 1.82
4479 4542 1.341089 GGGGGCGGAGAGAGAAAATTT 60.341 52.381 0.00 0.00 0.00 1.82
4480 4543 2.447443 GGGGCGGAGAGAGAAAATTTT 58.553 47.619 2.28 2.28 0.00 1.82
4481 4544 2.164422 GGGGCGGAGAGAGAAAATTTTG 59.836 50.000 8.47 0.00 0.00 2.44
4482 4545 2.416027 GGGCGGAGAGAGAAAATTTTGC 60.416 50.000 8.47 2.69 0.00 3.68
4483 4546 2.228822 GGCGGAGAGAGAAAATTTTGCA 59.771 45.455 8.47 0.00 0.00 4.08
4484 4547 3.119352 GGCGGAGAGAGAAAATTTTGCAT 60.119 43.478 8.47 0.00 0.00 3.96
4485 4548 3.855950 GCGGAGAGAGAAAATTTTGCATG 59.144 43.478 8.47 0.00 0.00 4.06
4486 4549 3.855950 CGGAGAGAGAAAATTTTGCATGC 59.144 43.478 11.82 11.82 0.00 4.06
4487 4550 4.616604 CGGAGAGAGAAAATTTTGCATGCA 60.617 41.667 18.46 18.46 0.00 3.96
4488 4551 4.624452 GGAGAGAGAAAATTTTGCATGCAC 59.376 41.667 22.58 7.02 0.00 4.57
4489 4552 5.464030 AGAGAGAAAATTTTGCATGCACT 57.536 34.783 22.58 12.47 0.00 4.40
4490 4553 5.850614 AGAGAGAAAATTTTGCATGCACTT 58.149 33.333 22.58 11.62 0.00 3.16
4491 4554 5.694910 AGAGAGAAAATTTTGCATGCACTTG 59.305 36.000 22.58 0.00 0.00 3.16
4492 4555 4.753107 AGAGAAAATTTTGCATGCACTTGG 59.247 37.500 22.58 0.00 0.00 3.61
4493 4556 3.251487 AGAAAATTTTGCATGCACTTGGC 59.749 39.130 22.58 6.95 45.13 4.52
4494 4557 1.525941 AATTTTGCATGCACTTGGCC 58.474 45.000 22.58 0.00 43.89 5.36
4495 4558 0.321830 ATTTTGCATGCACTTGGCCC 60.322 50.000 22.58 0.00 43.89 5.80
4496 4559 1.693152 TTTTGCATGCACTTGGCCCA 61.693 50.000 22.58 0.00 43.89 5.36
4497 4560 1.481901 TTTGCATGCACTTGGCCCAT 61.482 50.000 22.58 0.00 43.89 4.00
4498 4561 0.614134 TTGCATGCACTTGGCCCATA 60.614 50.000 22.58 0.00 43.89 2.74
4499 4562 1.038681 TGCATGCACTTGGCCCATAG 61.039 55.000 18.46 0.00 43.89 2.23
4500 4563 1.039233 GCATGCACTTGGCCCATAGT 61.039 55.000 14.21 0.00 43.89 2.12
4501 4564 1.027357 CATGCACTTGGCCCATAGTC 58.973 55.000 0.00 0.00 43.89 2.59
4502 4565 0.625316 ATGCACTTGGCCCATAGTCA 59.375 50.000 0.00 2.79 43.89 3.41
4503 4566 0.035152 TGCACTTGGCCCATAGTCAG 60.035 55.000 0.00 0.00 43.89 3.51
4504 4567 1.379642 GCACTTGGCCCATAGTCAGC 61.380 60.000 0.00 0.00 36.11 4.26
4508 4571 2.832498 GGCCCATAGTCAGCCTCC 59.168 66.667 0.00 0.00 43.62 4.30
4509 4572 2.823758 GGCCCATAGTCAGCCTCCC 61.824 68.421 0.00 0.00 43.62 4.30
4510 4573 2.072487 GCCCATAGTCAGCCTCCCA 61.072 63.158 0.00 0.00 0.00 4.37
4511 4574 1.832912 CCCATAGTCAGCCTCCCAC 59.167 63.158 0.00 0.00 0.00 4.61
4512 4575 0.692419 CCCATAGTCAGCCTCCCACT 60.692 60.000 0.00 0.00 0.00 4.00
4513 4576 0.755686 CCATAGTCAGCCTCCCACTC 59.244 60.000 0.00 0.00 0.00 3.51
4514 4577 1.690845 CCATAGTCAGCCTCCCACTCT 60.691 57.143 0.00 0.00 0.00 3.24
4515 4578 1.686052 CATAGTCAGCCTCCCACTCTC 59.314 57.143 0.00 0.00 0.00 3.20
4516 4579 1.003646 TAGTCAGCCTCCCACTCTCT 58.996 55.000 0.00 0.00 0.00 3.10
4517 4580 0.324275 AGTCAGCCTCCCACTCTCTC 60.324 60.000 0.00 0.00 0.00 3.20
4518 4581 0.324275 GTCAGCCTCCCACTCTCTCT 60.324 60.000 0.00 0.00 0.00 3.10
4519 4582 0.411452 TCAGCCTCCCACTCTCTCTT 59.589 55.000 0.00 0.00 0.00 2.85
4520 4583 1.203237 TCAGCCTCCCACTCTCTCTTT 60.203 52.381 0.00 0.00 0.00 2.52
4521 4584 1.206849 CAGCCTCCCACTCTCTCTTTC 59.793 57.143 0.00 0.00 0.00 2.62
4522 4585 0.539518 GCCTCCCACTCTCTCTTTCC 59.460 60.000 0.00 0.00 0.00 3.13
4523 4586 1.899438 GCCTCCCACTCTCTCTTTCCT 60.899 57.143 0.00 0.00 0.00 3.36
4524 4587 2.545810 CCTCCCACTCTCTCTTTCCTT 58.454 52.381 0.00 0.00 0.00 3.36
4525 4588 2.499693 CCTCCCACTCTCTCTTTCCTTC 59.500 54.545 0.00 0.00 0.00 3.46
4526 4589 2.499693 CTCCCACTCTCTCTTTCCTTCC 59.500 54.545 0.00 0.00 0.00 3.46
4527 4590 2.112691 TCCCACTCTCTCTTTCCTTCCT 59.887 50.000 0.00 0.00 0.00 3.36
4528 4591 2.909662 CCCACTCTCTCTTTCCTTCCTT 59.090 50.000 0.00 0.00 0.00 3.36
4529 4592 3.329225 CCCACTCTCTCTTTCCTTCCTTT 59.671 47.826 0.00 0.00 0.00 3.11
4530 4593 4.202514 CCCACTCTCTCTTTCCTTCCTTTT 60.203 45.833 0.00 0.00 0.00 2.27
4531 4594 5.380900 CCACTCTCTCTTTCCTTCCTTTTT 58.619 41.667 0.00 0.00 0.00 1.94
4532 4595 5.471797 CCACTCTCTCTTTCCTTCCTTTTTC 59.528 44.000 0.00 0.00 0.00 2.29
4533 4596 6.295249 CACTCTCTCTTTCCTTCCTTTTTCT 58.705 40.000 0.00 0.00 0.00 2.52
4534 4597 6.426633 CACTCTCTCTTTCCTTCCTTTTTCTC 59.573 42.308 0.00 0.00 0.00 2.87
4535 4598 5.870706 TCTCTCTTTCCTTCCTTTTTCTCC 58.129 41.667 0.00 0.00 0.00 3.71
4536 4599 4.642429 TCTCTTTCCTTCCTTTTTCTCCG 58.358 43.478 0.00 0.00 0.00 4.63
4537 4600 3.751518 TCTTTCCTTCCTTTTTCTCCGG 58.248 45.455 0.00 0.00 0.00 5.14
4538 4601 2.579410 TTCCTTCCTTTTTCTCCGGG 57.421 50.000 0.00 0.00 0.00 5.73
4539 4602 1.441695 TCCTTCCTTTTTCTCCGGGT 58.558 50.000 0.00 0.00 0.00 5.28
4540 4603 1.350019 TCCTTCCTTTTTCTCCGGGTC 59.650 52.381 0.00 0.00 0.00 4.46
4541 4604 1.613520 CCTTCCTTTTTCTCCGGGTCC 60.614 57.143 0.00 0.00 0.00 4.46
4542 4605 0.402887 TTCCTTTTTCTCCGGGTCCC 59.597 55.000 0.00 0.00 0.00 4.46
4543 4606 0.768997 TCCTTTTTCTCCGGGTCCCA 60.769 55.000 9.12 0.00 0.00 4.37
4544 4607 0.331616 CCTTTTTCTCCGGGTCCCAT 59.668 55.000 9.12 0.00 0.00 4.00
4545 4608 1.682087 CCTTTTTCTCCGGGTCCCATC 60.682 57.143 9.12 0.00 0.00 3.51
4546 4609 0.330267 TTTTTCTCCGGGTCCCATCC 59.670 55.000 9.12 0.00 0.00 3.51
4547 4610 0.842905 TTTTCTCCGGGTCCCATCCA 60.843 55.000 9.12 0.00 0.00 3.41
4548 4611 1.559065 TTTCTCCGGGTCCCATCCAC 61.559 60.000 9.12 0.00 0.00 4.02
4549 4612 2.365635 CTCCGGGTCCCATCCACT 60.366 66.667 9.12 0.00 0.00 4.00
4550 4613 1.995626 CTCCGGGTCCCATCCACTT 60.996 63.158 9.12 0.00 0.00 3.16
4551 4614 0.689745 CTCCGGGTCCCATCCACTTA 60.690 60.000 9.12 0.00 0.00 2.24
4552 4615 0.979187 TCCGGGTCCCATCCACTTAC 60.979 60.000 9.12 0.00 0.00 2.34
4553 4616 1.268992 CCGGGTCCCATCCACTTACA 61.269 60.000 9.12 0.00 0.00 2.41
4554 4617 0.107848 CGGGTCCCATCCACTTACAC 60.108 60.000 9.12 0.00 0.00 2.90
4555 4618 0.107848 GGGTCCCATCCACTTACACG 60.108 60.000 1.78 0.00 0.00 4.49
4556 4619 0.743345 GGTCCCATCCACTTACACGC 60.743 60.000 0.00 0.00 0.00 5.34
4557 4620 0.743345 GTCCCATCCACTTACACGCC 60.743 60.000 0.00 0.00 0.00 5.68
4558 4621 1.451387 CCCATCCACTTACACGCCC 60.451 63.158 0.00 0.00 0.00 6.13
4559 4622 1.602237 CCATCCACTTACACGCCCT 59.398 57.895 0.00 0.00 0.00 5.19
4560 4623 0.035439 CCATCCACTTACACGCCCTT 60.035 55.000 0.00 0.00 0.00 3.95
4561 4624 1.613255 CCATCCACTTACACGCCCTTT 60.613 52.381 0.00 0.00 0.00 3.11
4562 4625 1.737793 CATCCACTTACACGCCCTTTC 59.262 52.381 0.00 0.00 0.00 2.62
4563 4626 1.053424 TCCACTTACACGCCCTTTCT 58.947 50.000 0.00 0.00 0.00 2.52
4564 4627 1.418637 TCCACTTACACGCCCTTTCTT 59.581 47.619 0.00 0.00 0.00 2.52
4565 4628 2.158726 TCCACTTACACGCCCTTTCTTT 60.159 45.455 0.00 0.00 0.00 2.52
4566 4629 2.621526 CCACTTACACGCCCTTTCTTTT 59.378 45.455 0.00 0.00 0.00 2.27
4567 4630 3.304458 CCACTTACACGCCCTTTCTTTTC 60.304 47.826 0.00 0.00 0.00 2.29
4568 4631 2.546789 ACTTACACGCCCTTTCTTTTCG 59.453 45.455 0.00 0.00 0.00 3.46
4569 4632 2.243602 TACACGCCCTTTCTTTTCGT 57.756 45.000 0.00 0.00 0.00 3.85
4570 4633 1.385528 ACACGCCCTTTCTTTTCGTT 58.614 45.000 0.00 0.00 0.00 3.85
4571 4634 1.332686 ACACGCCCTTTCTTTTCGTTC 59.667 47.619 0.00 0.00 0.00 3.95
4572 4635 1.602377 CACGCCCTTTCTTTTCGTTCT 59.398 47.619 0.00 0.00 0.00 3.01
4573 4636 1.871676 ACGCCCTTTCTTTTCGTTCTC 59.128 47.619 0.00 0.00 0.00 2.87
4574 4637 2.143925 CGCCCTTTCTTTTCGTTCTCT 58.856 47.619 0.00 0.00 0.00 3.10
4575 4638 2.157863 CGCCCTTTCTTTTCGTTCTCTC 59.842 50.000 0.00 0.00 0.00 3.20
4576 4639 2.484651 GCCCTTTCTTTTCGTTCTCTCC 59.515 50.000 0.00 0.00 0.00 3.71
4577 4640 3.740115 CCCTTTCTTTTCGTTCTCTCCA 58.260 45.455 0.00 0.00 0.00 3.86
4578 4641 3.498777 CCCTTTCTTTTCGTTCTCTCCAC 59.501 47.826 0.00 0.00 0.00 4.02
4579 4642 3.498777 CCTTTCTTTTCGTTCTCTCCACC 59.501 47.826 0.00 0.00 0.00 4.61
4580 4643 3.830744 TTCTTTTCGTTCTCTCCACCA 57.169 42.857 0.00 0.00 0.00 4.17
4581 4644 3.107642 TCTTTTCGTTCTCTCCACCAC 57.892 47.619 0.00 0.00 0.00 4.16
4582 4645 2.432874 TCTTTTCGTTCTCTCCACCACA 59.567 45.455 0.00 0.00 0.00 4.17
4583 4646 3.071023 TCTTTTCGTTCTCTCCACCACAT 59.929 43.478 0.00 0.00 0.00 3.21
4584 4647 3.485463 TTTCGTTCTCTCCACCACATT 57.515 42.857 0.00 0.00 0.00 2.71
4585 4648 3.485463 TTCGTTCTCTCCACCACATTT 57.515 42.857 0.00 0.00 0.00 2.32
4586 4649 3.485463 TCGTTCTCTCCACCACATTTT 57.515 42.857 0.00 0.00 0.00 1.82
4587 4650 3.399330 TCGTTCTCTCCACCACATTTTC 58.601 45.455 0.00 0.00 0.00 2.29
4588 4651 3.071023 TCGTTCTCTCCACCACATTTTCT 59.929 43.478 0.00 0.00 0.00 2.52
4589 4652 3.815401 CGTTCTCTCCACCACATTTTCTT 59.185 43.478 0.00 0.00 0.00 2.52
4590 4653 4.083802 CGTTCTCTCCACCACATTTTCTTC 60.084 45.833 0.00 0.00 0.00 2.87
4591 4654 3.664107 TCTCTCCACCACATTTTCTTCG 58.336 45.455 0.00 0.00 0.00 3.79
4592 4655 2.744202 CTCTCCACCACATTTTCTTCGG 59.256 50.000 0.00 0.00 0.00 4.30
4593 4656 1.812571 CTCCACCACATTTTCTTCGGG 59.187 52.381 0.00 0.00 0.00 5.14
4594 4657 0.243636 CCACCACATTTTCTTCGGGC 59.756 55.000 0.00 0.00 0.00 6.13
4595 4658 0.243636 CACCACATTTTCTTCGGGCC 59.756 55.000 0.00 0.00 0.00 5.80
4596 4659 1.241315 ACCACATTTTCTTCGGGCCG 61.241 55.000 22.51 22.51 0.00 6.13
4597 4660 1.154035 CACATTTTCTTCGGGCCGC 60.154 57.895 23.83 0.00 0.00 6.53
4598 4661 1.602323 ACATTTTCTTCGGGCCGCA 60.602 52.632 23.83 10.39 0.00 5.69
4599 4662 1.154035 CATTTTCTTCGGGCCGCAC 60.154 57.895 23.83 0.00 0.00 5.34
4600 4663 1.602323 ATTTTCTTCGGGCCGCACA 60.602 52.632 23.83 6.59 0.00 4.57
4601 4664 1.862602 ATTTTCTTCGGGCCGCACAC 61.863 55.000 23.83 0.00 0.00 3.82
4602 4665 2.951475 TTTTCTTCGGGCCGCACACT 62.951 55.000 23.83 0.00 0.00 3.55
4603 4666 4.680237 TCTTCGGGCCGCACACTG 62.680 66.667 23.83 7.16 0.00 3.66
4610 4673 3.730761 GCCGCACACTGCTCCTTG 61.731 66.667 0.00 0.00 42.25 3.61
4611 4674 3.730761 CCGCACACTGCTCCTTGC 61.731 66.667 0.00 0.00 42.25 4.01
4647 4710 4.016706 CGGGTCCACCTCCACCAC 62.017 72.222 0.00 0.00 36.97 4.16
4648 4711 3.647771 GGGTCCACCTCCACCACC 61.648 72.222 0.00 0.00 33.91 4.61
4649 4712 4.016706 GGTCCACCTCCACCACCG 62.017 72.222 0.00 0.00 32.33 4.94
4650 4713 4.699522 GTCCACCTCCACCACCGC 62.700 72.222 0.00 0.00 0.00 5.68
4686 4749 2.506217 CTGCGCCGCGAAGAAGTA 60.506 61.111 16.30 0.00 33.75 2.24
4687 4750 2.506217 TGCGCCGCGAAGAAGTAG 60.506 61.111 18.91 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.455815 GTCGAATCAAATGGCCACCC 59.544 55.000 8.16 0.00 0.00 4.61
1 2 0.455815 GGTCGAATCAAATGGCCACC 59.544 55.000 8.16 0.00 0.00 4.61
2 3 0.098728 CGGTCGAATCAAATGGCCAC 59.901 55.000 8.16 0.00 0.00 5.01
3 4 0.035915 TCGGTCGAATCAAATGGCCA 60.036 50.000 8.56 8.56 0.00 5.36
4 5 1.308998 ATCGGTCGAATCAAATGGCC 58.691 50.000 0.00 0.00 0.00 5.36
5 6 3.108144 CAAATCGGTCGAATCAAATGGC 58.892 45.455 0.00 0.00 0.00 4.40
6 7 3.694734 CCAAATCGGTCGAATCAAATGG 58.305 45.455 0.00 0.00 0.00 3.16
19 20 0.601057 GTTCCACCCAACCAAATCGG 59.399 55.000 0.00 0.00 42.50 4.18
20 21 0.239879 CGTTCCACCCAACCAAATCG 59.760 55.000 0.00 0.00 0.00 3.34
21 22 0.601057 CCGTTCCACCCAACCAAATC 59.399 55.000 0.00 0.00 0.00 2.17
22 23 0.105913 ACCGTTCCACCCAACCAAAT 60.106 50.000 0.00 0.00 0.00 2.32
23 24 0.324460 AACCGTTCCACCCAACCAAA 60.324 50.000 0.00 0.00 0.00 3.28
24 25 0.752376 GAACCGTTCCACCCAACCAA 60.752 55.000 0.00 0.00 0.00 3.67
25 26 1.152922 GAACCGTTCCACCCAACCA 60.153 57.895 0.00 0.00 0.00 3.67
26 27 1.152922 TGAACCGTTCCACCCAACC 60.153 57.895 8.80 0.00 0.00 3.77
27 28 1.792118 GCTGAACCGTTCCACCCAAC 61.792 60.000 8.80 0.00 0.00 3.77
28 29 1.527380 GCTGAACCGTTCCACCCAA 60.527 57.895 8.80 0.00 0.00 4.12
29 30 2.063015 ATGCTGAACCGTTCCACCCA 62.063 55.000 8.80 1.59 0.00 4.51
30 31 1.303317 ATGCTGAACCGTTCCACCC 60.303 57.895 8.80 0.00 0.00 4.61
31 32 0.321653 AGATGCTGAACCGTTCCACC 60.322 55.000 8.80 0.00 0.00 4.61
32 33 1.464997 GAAGATGCTGAACCGTTCCAC 59.535 52.381 8.80 1.68 0.00 4.02
33 34 1.071542 TGAAGATGCTGAACCGTTCCA 59.928 47.619 8.80 1.07 0.00 3.53
34 35 1.808411 TGAAGATGCTGAACCGTTCC 58.192 50.000 8.80 0.00 0.00 3.62
35 36 2.096496 CCATGAAGATGCTGAACCGTTC 59.904 50.000 4.18 4.18 0.00 3.95
36 37 2.086869 CCATGAAGATGCTGAACCGTT 58.913 47.619 0.00 0.00 0.00 4.44
37 38 1.742761 CCATGAAGATGCTGAACCGT 58.257 50.000 0.00 0.00 0.00 4.83
38 39 0.379669 GCCATGAAGATGCTGAACCG 59.620 55.000 0.00 0.00 0.00 4.44
39 40 1.466856 TGCCATGAAGATGCTGAACC 58.533 50.000 0.00 0.00 0.00 3.62
40 41 5.449107 AATATGCCATGAAGATGCTGAAC 57.551 39.130 0.00 0.00 0.00 3.18
41 42 6.322969 AGAAAATATGCCATGAAGATGCTGAA 59.677 34.615 0.00 0.00 0.00 3.02
42 43 5.831525 AGAAAATATGCCATGAAGATGCTGA 59.168 36.000 0.00 0.00 0.00 4.26
43 44 6.085555 AGAAAATATGCCATGAAGATGCTG 57.914 37.500 0.00 0.00 0.00 4.41
44 45 6.726490 AAGAAAATATGCCATGAAGATGCT 57.274 33.333 0.00 0.00 0.00 3.79
45 46 7.781548 AAAAGAAAATATGCCATGAAGATGC 57.218 32.000 0.00 0.00 0.00 3.91
74 75 3.559238 AAGCACATGAATGGTTCGAAC 57.441 42.857 20.14 20.14 35.40 3.95
75 76 5.895636 ATAAAGCACATGAATGGTTCGAA 57.104 34.783 0.00 0.00 39.32 3.71
76 77 6.183360 GGTTATAAAGCACATGAATGGTTCGA 60.183 38.462 0.00 0.00 39.32 3.71
77 78 5.971202 GGTTATAAAGCACATGAATGGTTCG 59.029 40.000 0.00 0.00 39.32 3.95
78 79 6.862209 TGGTTATAAAGCACATGAATGGTTC 58.138 36.000 0.00 0.00 39.32 3.62
79 80 6.849085 TGGTTATAAAGCACATGAATGGTT 57.151 33.333 0.00 0.00 41.95 3.67
80 81 6.849085 TTGGTTATAAAGCACATGAATGGT 57.151 33.333 0.00 0.00 38.84 3.55
81 82 7.095910 TGTTTGGTTATAAAGCACATGAATGG 58.904 34.615 0.00 0.00 38.84 3.16
82 83 8.597227 CATGTTTGGTTATAAAGCACATGAATG 58.403 33.333 16.31 0.00 41.79 2.67
83 84 8.313292 ACATGTTTGGTTATAAAGCACATGAAT 58.687 29.630 22.73 8.91 41.79 2.57
84 85 7.665690 ACATGTTTGGTTATAAAGCACATGAA 58.334 30.769 22.73 1.35 41.79 2.57
85 86 7.225784 ACATGTTTGGTTATAAAGCACATGA 57.774 32.000 22.73 0.00 41.79 3.07
86 87 7.887996 AACATGTTTGGTTATAAAGCACATG 57.112 32.000 4.92 18.14 43.36 3.21
88 89 9.988815 AATAAACATGTTTGGTTATAAAGCACA 57.011 25.926 29.72 8.37 43.42 4.57
114 115 2.667470 TGGGTTGGGATCGTTCAAAAA 58.333 42.857 0.00 0.00 0.00 1.94
115 116 2.366640 TGGGTTGGGATCGTTCAAAA 57.633 45.000 0.00 0.00 0.00 2.44
116 117 2.595750 ATGGGTTGGGATCGTTCAAA 57.404 45.000 0.00 0.00 0.00 2.69
117 118 2.224892 TGAATGGGTTGGGATCGTTCAA 60.225 45.455 0.00 0.00 34.64 2.69
118 119 1.352687 TGAATGGGTTGGGATCGTTCA 59.647 47.619 0.00 0.00 35.03 3.18
119 120 2.122783 TGAATGGGTTGGGATCGTTC 57.877 50.000 0.00 0.00 0.00 3.95
120 121 2.025416 TCATGAATGGGTTGGGATCGTT 60.025 45.455 0.00 0.00 0.00 3.85
121 122 1.563879 TCATGAATGGGTTGGGATCGT 59.436 47.619 0.00 0.00 0.00 3.73
122 123 1.949525 GTCATGAATGGGTTGGGATCG 59.050 52.381 0.00 0.00 0.00 3.69
123 124 2.310538 GGTCATGAATGGGTTGGGATC 58.689 52.381 0.00 0.00 0.00 3.36
124 125 1.410083 CGGTCATGAATGGGTTGGGAT 60.410 52.381 0.00 0.00 0.00 3.85
125 126 0.034574 CGGTCATGAATGGGTTGGGA 60.035 55.000 0.00 0.00 0.00 4.37
126 127 1.666209 GCGGTCATGAATGGGTTGGG 61.666 60.000 0.00 0.00 0.00 4.12
127 128 1.666209 GGCGGTCATGAATGGGTTGG 61.666 60.000 0.00 0.00 0.00 3.77
128 129 1.666209 GGGCGGTCATGAATGGGTTG 61.666 60.000 0.00 0.00 0.00 3.77
129 130 1.379843 GGGCGGTCATGAATGGGTT 60.380 57.895 0.00 0.00 0.00 4.11
130 131 1.863155 AAGGGCGGTCATGAATGGGT 61.863 55.000 0.00 0.00 0.00 4.51
131 132 1.076777 AAGGGCGGTCATGAATGGG 60.077 57.895 0.00 0.00 0.00 4.00
132 133 2.008268 GCAAGGGCGGTCATGAATGG 62.008 60.000 0.00 0.00 0.00 3.16
133 134 1.314534 TGCAAGGGCGGTCATGAATG 61.315 55.000 0.00 0.00 45.35 2.67
134 135 0.611618 TTGCAAGGGCGGTCATGAAT 60.612 50.000 0.00 0.00 45.35 2.57
135 136 1.228398 TTGCAAGGGCGGTCATGAA 60.228 52.632 0.00 0.00 45.35 2.57
136 137 1.971167 GTTGCAAGGGCGGTCATGA 60.971 57.895 0.00 0.00 45.35 3.07
137 138 2.568090 GTTGCAAGGGCGGTCATG 59.432 61.111 0.00 0.00 45.35 3.07
138 139 2.676471 GGTTGCAAGGGCGGTCAT 60.676 61.111 0.00 0.00 45.35 3.06
139 140 3.723097 TTGGTTGCAAGGGCGGTCA 62.723 57.895 0.00 0.00 45.35 4.02
140 141 2.494530 TTTGGTTGCAAGGGCGGTC 61.495 57.895 0.00 0.00 45.35 4.79
141 142 2.443016 TTTGGTTGCAAGGGCGGT 60.443 55.556 0.00 0.00 45.35 5.68
142 143 2.028925 GTTTGGTTGCAAGGGCGG 59.971 61.111 0.00 0.00 45.35 6.13
143 144 2.354539 CGTTTGGTTGCAAGGGCG 60.355 61.111 0.00 0.00 45.35 6.13
144 145 2.661537 GCGTTTGGTTGCAAGGGC 60.662 61.111 0.00 0.00 41.68 5.19
145 146 1.591327 GTGCGTTTGGTTGCAAGGG 60.591 57.895 0.00 0.00 43.75 3.95
146 147 1.591327 GGTGCGTTTGGTTGCAAGG 60.591 57.895 0.00 0.00 43.75 3.61
147 148 1.591327 GGGTGCGTTTGGTTGCAAG 60.591 57.895 0.00 0.00 43.75 4.01
148 149 0.752009 TAGGGTGCGTTTGGTTGCAA 60.752 50.000 0.00 0.00 43.75 4.08
149 150 1.152943 TAGGGTGCGTTTGGTTGCA 60.153 52.632 0.00 0.00 39.13 4.08
150 151 0.887387 TCTAGGGTGCGTTTGGTTGC 60.887 55.000 0.00 0.00 0.00 4.17
151 152 1.468520 CATCTAGGGTGCGTTTGGTTG 59.531 52.381 0.00 0.00 0.00 3.77
152 153 1.349688 TCATCTAGGGTGCGTTTGGTT 59.650 47.619 0.00 0.00 0.00 3.67
153 154 0.981183 TCATCTAGGGTGCGTTTGGT 59.019 50.000 0.00 0.00 0.00 3.67
154 155 2.107950 TTCATCTAGGGTGCGTTTGG 57.892 50.000 0.00 0.00 0.00 3.28
155 156 2.285220 CGATTCATCTAGGGTGCGTTTG 59.715 50.000 0.00 0.00 0.00 2.93
156 157 2.550978 CGATTCATCTAGGGTGCGTTT 58.449 47.619 0.00 0.00 0.00 3.60
157 158 1.202533 CCGATTCATCTAGGGTGCGTT 60.203 52.381 0.00 0.00 0.00 4.84
158 159 0.389391 CCGATTCATCTAGGGTGCGT 59.611 55.000 0.00 0.00 0.00 5.24
159 160 0.946221 GCCGATTCATCTAGGGTGCG 60.946 60.000 0.00 0.00 0.00 5.34
160 161 0.603975 GGCCGATTCATCTAGGGTGC 60.604 60.000 0.00 0.00 0.00 5.01
161 162 0.319900 CGGCCGATTCATCTAGGGTG 60.320 60.000 24.07 0.00 0.00 4.61
162 163 1.472662 CCGGCCGATTCATCTAGGGT 61.473 60.000 30.73 0.00 0.00 4.34
163 164 1.293498 CCGGCCGATTCATCTAGGG 59.707 63.158 30.73 0.00 0.00 3.53
164 165 0.319900 CACCGGCCGATTCATCTAGG 60.320 60.000 30.73 8.09 0.00 3.02
216 217 2.804527 CGTGCATGATGATCACCTTAGG 59.195 50.000 0.00 0.00 0.00 2.69
243 245 5.204409 ACACTACCATTACAAAGTCGTGA 57.796 39.130 0.00 0.00 33.02 4.35
321 323 4.010349 CTCGAACAAATTTAGAAGGGGCT 58.990 43.478 0.00 0.00 0.00 5.19
322 324 3.756963 ACTCGAACAAATTTAGAAGGGGC 59.243 43.478 0.00 0.00 0.00 5.80
448 474 2.154462 ACAGAAATTTCCGGTCTGCAG 58.846 47.619 16.64 7.63 42.09 4.41
811 838 4.708421 AGGTGATCAAGAAAATGACATGGG 59.292 41.667 0.00 0.00 30.82 4.00
1243 1270 1.303074 CTTCTGAGCTGGCTGGCAA 60.303 57.895 5.14 0.00 34.17 4.52
1538 1565 7.171337 ACCTTCATCAATGCAAACAACAAATAC 59.829 33.333 0.00 0.00 0.00 1.89
1814 1842 7.762159 GGAGAGGATACAAGAGAAACAACTTAG 59.238 40.741 0.00 0.00 41.41 2.18
1829 1857 4.631234 ACAACCAATAGGGAGAGGATACA 58.369 43.478 0.00 0.00 41.15 2.29
2121 2149 9.357161 ACCATTCACCTAATTTACACAAAGTTA 57.643 29.630 0.00 0.00 0.00 2.24
2122 2150 8.245195 ACCATTCACCTAATTTACACAAAGTT 57.755 30.769 0.00 0.00 0.00 2.66
2140 2168 7.116075 AGCCACAGTTTATATGTAACCATTCA 58.884 34.615 0.00 0.00 32.29 2.57
2151 2179 6.595682 AGAATGCACTAGCCACAGTTTATAT 58.404 36.000 0.00 0.00 41.13 0.86
2152 2180 5.989477 AGAATGCACTAGCCACAGTTTATA 58.011 37.500 0.00 0.00 41.13 0.98
2531 2559 0.407139 AGAGCCTTTTGCCATCCAGT 59.593 50.000 0.00 0.00 42.71 4.00
2603 2631 9.722056 GCACATGGTATAAATGTAGAAGAAAAG 57.278 33.333 0.00 0.00 36.10 2.27
2947 2975 5.486063 ACATGTAGGACACCTGGTTATACAA 59.514 40.000 0.00 0.00 35.60 2.41
3449 3477 7.390162 TGAGTGTATTTTGAGCATGTATTGACA 59.610 33.333 0.00 0.00 40.72 3.58
3510 3538 5.823570 TCTTATTTCCCGTTTTGTTGACAGA 59.176 36.000 0.00 0.00 0.00 3.41
3511 3539 6.067263 TCTTATTTCCCGTTTTGTTGACAG 57.933 37.500 0.00 0.00 0.00 3.51
3512 3540 6.452494 TTCTTATTTCCCGTTTTGTTGACA 57.548 33.333 0.00 0.00 0.00 3.58
3513 3541 6.199531 GGTTTCTTATTTCCCGTTTTGTTGAC 59.800 38.462 0.00 0.00 0.00 3.18
3514 3542 6.127423 TGGTTTCTTATTTCCCGTTTTGTTGA 60.127 34.615 0.00 0.00 0.00 3.18
3641 3674 9.118236 GAATGCAGTTAAGAAAATGTCAACTAC 57.882 33.333 0.00 0.00 33.27 2.73
3694 3727 5.935945 TGAACCTGACCTTCAACAATAGAA 58.064 37.500 0.00 0.00 0.00 2.10
3695 3728 5.560722 TGAACCTGACCTTCAACAATAGA 57.439 39.130 0.00 0.00 0.00 1.98
3879 3912 0.179032 AACGACAGTTCATGGCCACA 60.179 50.000 8.16 0.00 35.23 4.17
3935 3968 0.040067 CTTTCCAGCAACGGAACTGC 60.040 55.000 2.06 0.00 44.80 4.40
3968 4001 7.042523 GCATGCCAATAATTAACCTTTAAGCAG 60.043 37.037 6.36 0.00 0.00 4.24
3976 4009 6.608808 AGAGAAAGCATGCCAATAATTAACCT 59.391 34.615 15.66 0.00 0.00 3.50
4043 4105 1.242076 CCACAAGACCTTTCCTGCTG 58.758 55.000 0.00 0.00 0.00 4.41
4104 4166 4.023107 TCAGAGGACTACAAAAGTGACGAG 60.023 45.833 0.00 0.00 39.07 4.18
4109 4171 5.346281 GTCGATTCAGAGGACTACAAAAGTG 59.654 44.000 0.00 0.00 39.07 3.16
4192 4254 2.507058 TCCAGCTTCTCCATAGTTGCAT 59.493 45.455 0.00 0.00 0.00 3.96
4202 4264 6.176896 AGAAACTATCTTTTCCAGCTTCTCC 58.823 40.000 0.00 0.00 36.31 3.71
4239 4301 9.265862 TGGTTATGGACAATTTGGAGATTTAAT 57.734 29.630 0.78 0.00 0.00 1.40
4240 4302 8.657387 TGGTTATGGACAATTTGGAGATTTAA 57.343 30.769 0.78 0.00 0.00 1.52
4242 4304 7.558604 CATGGTTATGGACAATTTGGAGATTT 58.441 34.615 0.78 0.00 0.00 2.17
4259 4322 6.419484 TCGAATAGACATGTCCATGGTTAT 57.581 37.500 22.21 9.44 42.91 1.89
4263 4326 5.994054 AGAATTCGAATAGACATGTCCATGG 59.006 40.000 22.21 4.97 42.91 3.66
4285 4348 8.394822 AGTGGAGATGCTCTTATATAGGTTAGA 58.605 37.037 0.00 0.00 0.00 2.10
4286 4349 8.588290 AGTGGAGATGCTCTTATATAGGTTAG 57.412 38.462 0.00 0.00 0.00 2.34
4287 4350 9.688091 CTAGTGGAGATGCTCTTATATAGGTTA 57.312 37.037 0.00 0.00 0.00 2.85
4288 4351 7.617723 CCTAGTGGAGATGCTCTTATATAGGTT 59.382 40.741 0.00 0.00 34.57 3.50
4289 4352 7.122715 CCTAGTGGAGATGCTCTTATATAGGT 58.877 42.308 0.00 0.00 34.57 3.08
4290 4353 6.040391 GCCTAGTGGAGATGCTCTTATATAGG 59.960 46.154 0.00 0.00 34.57 2.57
4291 4354 6.040391 GGCCTAGTGGAGATGCTCTTATATAG 59.960 46.154 0.00 0.00 34.57 1.31
4292 4355 5.894393 GGCCTAGTGGAGATGCTCTTATATA 59.106 44.000 0.00 0.00 34.57 0.86
4293 4356 4.714308 GGCCTAGTGGAGATGCTCTTATAT 59.286 45.833 0.00 0.00 34.57 0.86
4294 4357 4.090090 GGCCTAGTGGAGATGCTCTTATA 58.910 47.826 0.00 0.00 34.57 0.98
4295 4358 2.903135 GGCCTAGTGGAGATGCTCTTAT 59.097 50.000 0.00 0.00 34.57 1.73
4296 4359 2.320781 GGCCTAGTGGAGATGCTCTTA 58.679 52.381 0.00 0.00 34.57 2.10
4297 4360 1.127343 GGCCTAGTGGAGATGCTCTT 58.873 55.000 0.00 0.00 34.57 2.85
4298 4361 0.762461 GGGCCTAGTGGAGATGCTCT 60.762 60.000 0.84 0.00 34.57 4.09
4299 4362 1.751563 GGGCCTAGTGGAGATGCTC 59.248 63.158 0.84 0.00 34.57 4.26
4300 4363 1.768077 GGGGCCTAGTGGAGATGCT 60.768 63.158 0.84 0.00 34.57 3.79
4301 4364 2.823758 GGGGGCCTAGTGGAGATGC 61.824 68.421 0.84 0.00 34.57 3.91
4302 4365 0.191064 TAGGGGGCCTAGTGGAGATG 59.809 60.000 0.84 0.00 34.61 2.90
4303 4366 0.949582 TTAGGGGGCCTAGTGGAGAT 59.050 55.000 0.84 0.00 37.42 2.75
4304 4367 0.264955 CTTAGGGGGCCTAGTGGAGA 59.735 60.000 0.84 0.00 37.42 3.71
4305 4368 0.264955 TCTTAGGGGGCCTAGTGGAG 59.735 60.000 0.84 0.00 37.42 3.86
4306 4369 0.720232 TTCTTAGGGGGCCTAGTGGA 59.280 55.000 0.84 0.00 37.42 4.02
4307 4370 1.132500 CTTCTTAGGGGGCCTAGTGG 58.868 60.000 0.84 0.00 37.42 4.00
4308 4371 0.470341 GCTTCTTAGGGGGCCTAGTG 59.530 60.000 0.84 0.00 37.42 2.74
4309 4372 0.694783 GGCTTCTTAGGGGGCCTAGT 60.695 60.000 0.84 0.00 41.20 2.57
4310 4373 1.419720 GGGCTTCTTAGGGGGCCTAG 61.420 65.000 0.84 0.00 43.62 3.02
4311 4374 1.385489 GGGCTTCTTAGGGGGCCTA 60.385 63.158 0.84 0.00 43.62 3.93
4312 4375 2.696504 GGGCTTCTTAGGGGGCCT 60.697 66.667 0.84 0.00 43.62 5.19
4313 4376 3.822035 GGGGCTTCTTAGGGGGCC 61.822 72.222 0.00 0.00 43.68 5.80
4314 4377 3.822035 GGGGGCTTCTTAGGGGGC 61.822 72.222 0.00 0.00 0.00 5.80
4315 4378 2.286885 TGGGGGCTTCTTAGGGGG 60.287 66.667 0.00 0.00 0.00 5.40
4316 4379 2.386935 CCTGGGGGCTTCTTAGGGG 61.387 68.421 0.00 0.00 0.00 4.79
4317 4380 1.307866 TCCTGGGGGCTTCTTAGGG 60.308 63.158 0.00 0.00 0.00 3.53
4318 4381 1.636769 GGTCCTGGGGGCTTCTTAGG 61.637 65.000 0.00 0.00 0.00 2.69
4319 4382 0.914417 TGGTCCTGGGGGCTTCTTAG 60.914 60.000 0.00 0.00 0.00 2.18
4320 4383 1.162329 TGGTCCTGGGGGCTTCTTA 59.838 57.895 0.00 0.00 0.00 2.10
4321 4384 2.121506 TGGTCCTGGGGGCTTCTT 60.122 61.111 0.00 0.00 0.00 2.52
4322 4385 2.936032 GTGGTCCTGGGGGCTTCT 60.936 66.667 0.00 0.00 0.00 2.85
4323 4386 2.081585 AAAGTGGTCCTGGGGGCTTC 62.082 60.000 0.00 0.00 0.00 3.86
4324 4387 1.664956 AAAAGTGGTCCTGGGGGCTT 61.665 55.000 0.00 0.00 0.00 4.35
4325 4388 1.664956 AAAAAGTGGTCCTGGGGGCT 61.665 55.000 0.00 0.00 0.00 5.19
4326 4389 0.113580 TAAAAAGTGGTCCTGGGGGC 59.886 55.000 0.00 0.00 0.00 5.80
4327 4390 1.427753 ACTAAAAAGTGGTCCTGGGGG 59.572 52.381 0.00 0.00 0.00 5.40
4328 4391 2.791655 GACTAAAAAGTGGTCCTGGGG 58.208 52.381 0.00 0.00 0.00 4.96
4329 4392 2.423577 CGACTAAAAAGTGGTCCTGGG 58.576 52.381 0.00 0.00 0.00 4.45
4330 4393 1.804748 GCGACTAAAAAGTGGTCCTGG 59.195 52.381 0.00 0.00 0.00 4.45
4331 4394 1.804748 GGCGACTAAAAAGTGGTCCTG 59.195 52.381 0.00 0.00 0.00 3.86
4332 4395 1.607251 CGGCGACTAAAAAGTGGTCCT 60.607 52.381 0.00 0.00 0.00 3.85
4333 4396 0.794473 CGGCGACTAAAAAGTGGTCC 59.206 55.000 0.00 0.00 0.00 4.46
4334 4397 0.794473 CCGGCGACTAAAAAGTGGTC 59.206 55.000 9.30 0.00 0.00 4.02
4335 4398 1.232621 GCCGGCGACTAAAAAGTGGT 61.233 55.000 12.58 0.00 0.00 4.16
4336 4399 1.231958 TGCCGGCGACTAAAAAGTGG 61.232 55.000 23.90 0.00 0.00 4.00
4337 4400 0.165944 CTGCCGGCGACTAAAAAGTG 59.834 55.000 23.90 0.00 0.00 3.16
4338 4401 0.250166 ACTGCCGGCGACTAAAAAGT 60.250 50.000 23.90 14.17 0.00 2.66
4339 4402 1.717194 TACTGCCGGCGACTAAAAAG 58.283 50.000 23.90 13.44 0.00 2.27
4340 4403 2.166821 TTACTGCCGGCGACTAAAAA 57.833 45.000 23.90 6.01 0.00 1.94
4341 4404 2.166821 TTTACTGCCGGCGACTAAAA 57.833 45.000 23.90 14.35 0.00 1.52
4342 4405 2.166821 TTTTACTGCCGGCGACTAAA 57.833 45.000 23.90 18.69 0.00 1.85
4343 4406 2.166821 TTTTTACTGCCGGCGACTAA 57.833 45.000 23.90 13.73 0.00 2.24
4344 4407 2.389962 ATTTTTACTGCCGGCGACTA 57.610 45.000 23.90 7.75 0.00 2.59
4345 4408 2.389962 TATTTTTACTGCCGGCGACT 57.610 45.000 23.90 8.88 0.00 4.18
4346 4409 2.353579 ACATATTTTTACTGCCGGCGAC 59.646 45.455 23.90 0.00 0.00 5.19
4347 4410 2.610374 GACATATTTTTACTGCCGGCGA 59.390 45.455 23.90 10.31 0.00 5.54
4348 4411 2.286772 GGACATATTTTTACTGCCGGCG 60.287 50.000 23.90 18.98 0.00 6.46
4349 4412 2.034179 GGGACATATTTTTACTGCCGGC 59.966 50.000 22.73 22.73 0.00 6.13
4350 4413 3.283751 TGGGACATATTTTTACTGCCGG 58.716 45.455 0.00 0.00 0.00 6.13
4355 4418 7.944554 CTGGGACATATGGGACATATTTTTACT 59.055 37.037 7.80 0.00 41.09 2.24
4356 4419 7.309194 GCTGGGACATATGGGACATATTTTTAC 60.309 40.741 7.80 0.00 41.09 2.01
4357 4420 6.719370 GCTGGGACATATGGGACATATTTTTA 59.281 38.462 7.80 0.00 41.09 1.52
4358 4421 5.539955 GCTGGGACATATGGGACATATTTTT 59.460 40.000 7.80 0.00 41.09 1.94
4359 4422 5.079643 GCTGGGACATATGGGACATATTTT 58.920 41.667 7.80 0.00 41.09 1.82
4360 4423 4.509122 GGCTGGGACATATGGGACATATTT 60.509 45.833 7.80 0.00 41.09 1.40
4361 4424 3.010584 GGCTGGGACATATGGGACATATT 59.989 47.826 7.80 0.00 41.09 1.28
4362 4425 2.578021 GGCTGGGACATATGGGACATAT 59.422 50.000 7.80 0.00 41.09 1.78
4363 4426 1.985159 GGCTGGGACATATGGGACATA 59.015 52.381 7.80 0.00 41.09 2.29
4364 4427 0.773644 GGCTGGGACATATGGGACAT 59.226 55.000 7.80 0.00 41.09 3.06
4365 4428 0.623031 TGGCTGGGACATATGGGACA 60.623 55.000 7.80 1.74 41.01 4.02
4366 4429 0.773644 ATGGCTGGGACATATGGGAC 59.226 55.000 7.80 0.00 38.20 4.46
4367 4430 0.773014 CATGGCTGGGACATATGGGA 59.227 55.000 7.80 0.00 38.20 4.37
4368 4431 0.479815 ACATGGCTGGGACATATGGG 59.520 55.000 7.80 0.00 38.20 4.00
4369 4432 1.546323 GGACATGGCTGGGACATATGG 60.546 57.143 7.80 0.00 38.20 2.74
4370 4433 1.422781 AGGACATGGCTGGGACATATG 59.577 52.381 0.00 0.00 38.20 1.78
4371 4434 1.701847 GAGGACATGGCTGGGACATAT 59.298 52.381 0.00 0.00 38.20 1.78
4372 4435 1.131638 GAGGACATGGCTGGGACATA 58.868 55.000 0.00 0.00 38.20 2.29
4373 4436 0.915872 TGAGGACATGGCTGGGACAT 60.916 55.000 0.00 0.00 38.20 3.06
4374 4437 1.538629 TGAGGACATGGCTGGGACA 60.539 57.895 0.00 0.00 0.00 4.02
4375 4438 1.222936 CTGAGGACATGGCTGGGAC 59.777 63.158 0.00 0.00 0.00 4.46
4376 4439 1.080907 TCTGAGGACATGGCTGGGA 59.919 57.895 0.00 0.00 0.00 4.37
4377 4440 1.222936 GTCTGAGGACATGGCTGGG 59.777 63.158 0.00 0.00 41.75 4.45
4378 4441 0.177604 GAGTCTGAGGACATGGCTGG 59.822 60.000 0.00 0.00 44.36 4.85
4379 4442 1.136695 GAGAGTCTGAGGACATGGCTG 59.863 57.143 0.00 0.00 44.36 4.85
4380 4443 1.484038 GAGAGTCTGAGGACATGGCT 58.516 55.000 0.00 0.00 44.36 4.75
4381 4444 0.102120 CGAGAGTCTGAGGACATGGC 59.898 60.000 0.00 0.00 44.36 4.40
4382 4445 1.756430 TCGAGAGTCTGAGGACATGG 58.244 55.000 0.00 0.00 44.36 3.66
4383 4446 4.383850 AAATCGAGAGTCTGAGGACATG 57.616 45.455 0.00 0.00 44.36 3.21
4384 4447 4.439426 CGAAAATCGAGAGTCTGAGGACAT 60.439 45.833 0.00 0.00 43.74 3.06
4385 4448 3.119814 CGAAAATCGAGAGTCTGAGGACA 60.120 47.826 0.00 0.00 43.74 4.02
4386 4449 3.430931 CGAAAATCGAGAGTCTGAGGAC 58.569 50.000 0.00 0.00 43.74 3.85
4387 4450 2.159366 GCGAAAATCGAGAGTCTGAGGA 60.159 50.000 0.00 0.00 43.74 3.71
4388 4451 2.189342 GCGAAAATCGAGAGTCTGAGG 58.811 52.381 0.00 0.00 43.74 3.86
4389 4452 2.189342 GGCGAAAATCGAGAGTCTGAG 58.811 52.381 0.00 0.00 43.74 3.35
4390 4453 1.467543 CGGCGAAAATCGAGAGTCTGA 60.468 52.381 0.00 0.00 43.74 3.27
4391 4454 0.917259 CGGCGAAAATCGAGAGTCTG 59.083 55.000 0.00 0.00 43.74 3.51
4392 4455 0.179134 CCGGCGAAAATCGAGAGTCT 60.179 55.000 9.30 0.00 43.74 3.24
4393 4456 0.179145 TCCGGCGAAAATCGAGAGTC 60.179 55.000 9.30 0.00 43.74 3.36
4394 4457 0.460311 ATCCGGCGAAAATCGAGAGT 59.540 50.000 9.30 0.00 43.74 3.24
4395 4458 1.571919 AATCCGGCGAAAATCGAGAG 58.428 50.000 9.30 0.00 43.74 3.20
4396 4459 2.018542 AAATCCGGCGAAAATCGAGA 57.981 45.000 9.30 0.00 43.74 4.04
4397 4460 2.440501 CAAAATCCGGCGAAAATCGAG 58.559 47.619 9.30 0.00 43.74 4.04
4398 4461 1.466697 GCAAAATCCGGCGAAAATCGA 60.467 47.619 9.30 0.00 43.74 3.59
4399 4462 0.913876 GCAAAATCCGGCGAAAATCG 59.086 50.000 9.30 0.00 43.89 3.34
4400 4463 1.989430 TGCAAAATCCGGCGAAAATC 58.011 45.000 9.30 0.00 0.00 2.17
4401 4464 2.447244 TTGCAAAATCCGGCGAAAAT 57.553 40.000 9.30 0.00 0.00 1.82
4402 4465 2.225068 TTTGCAAAATCCGGCGAAAA 57.775 40.000 10.02 0.00 30.73 2.29
4403 4466 2.225068 TTTTGCAAAATCCGGCGAAA 57.775 40.000 20.46 0.00 40.20 3.46
4404 4467 1.861575 GTTTTTGCAAAATCCGGCGAA 59.138 42.857 24.39 5.05 0.00 4.70
4405 4468 1.067821 AGTTTTTGCAAAATCCGGCGA 59.932 42.857 24.39 5.80 0.00 5.54
4406 4469 1.496934 AGTTTTTGCAAAATCCGGCG 58.503 45.000 24.39 0.00 0.00 6.46
4407 4470 2.411748 GCTAGTTTTTGCAAAATCCGGC 59.588 45.455 24.39 22.32 0.00 6.13
4408 4471 3.428534 GTGCTAGTTTTTGCAAAATCCGG 59.571 43.478 24.39 17.87 41.10 5.14
4409 4472 3.428534 GGTGCTAGTTTTTGCAAAATCCG 59.571 43.478 24.39 17.07 41.10 4.18
4410 4473 3.428534 CGGTGCTAGTTTTTGCAAAATCC 59.571 43.478 24.39 17.40 41.10 3.01
4411 4474 3.428534 CCGGTGCTAGTTTTTGCAAAATC 59.571 43.478 24.39 22.23 41.10 2.17
4412 4475 3.389221 CCGGTGCTAGTTTTTGCAAAAT 58.611 40.909 24.39 13.64 41.10 1.82
4413 4476 2.482142 CCCGGTGCTAGTTTTTGCAAAA 60.482 45.455 20.46 20.46 41.10 2.44
4414 4477 1.067821 CCCGGTGCTAGTTTTTGCAAA 59.932 47.619 8.05 8.05 41.10 3.68
4415 4478 0.671251 CCCGGTGCTAGTTTTTGCAA 59.329 50.000 0.00 0.00 41.10 4.08
4416 4479 0.179015 TCCCGGTGCTAGTTTTTGCA 60.179 50.000 0.00 0.00 36.79 4.08
4417 4480 0.240145 GTCCCGGTGCTAGTTTTTGC 59.760 55.000 0.00 0.00 0.00 3.68
4418 4481 1.804748 GAGTCCCGGTGCTAGTTTTTG 59.195 52.381 0.00 0.00 0.00 2.44
4419 4482 1.418637 TGAGTCCCGGTGCTAGTTTTT 59.581 47.619 0.00 0.00 0.00 1.94
4420 4483 1.053424 TGAGTCCCGGTGCTAGTTTT 58.947 50.000 0.00 0.00 0.00 2.43
4421 4484 1.066143 CATGAGTCCCGGTGCTAGTTT 60.066 52.381 0.00 0.00 0.00 2.66
4422 4485 0.537188 CATGAGTCCCGGTGCTAGTT 59.463 55.000 0.00 0.00 0.00 2.24
4423 4486 1.961180 GCATGAGTCCCGGTGCTAGT 61.961 60.000 0.00 0.00 34.85 2.57
4424 4487 1.227380 GCATGAGTCCCGGTGCTAG 60.227 63.158 0.00 0.00 34.85 3.42
4425 4488 1.960040 CTGCATGAGTCCCGGTGCTA 61.960 60.000 12.97 0.58 38.37 3.49
4426 4489 3.320879 CTGCATGAGTCCCGGTGCT 62.321 63.158 12.97 4.46 38.37 4.40
4427 4490 2.803155 TTCTGCATGAGTCCCGGTGC 62.803 60.000 0.00 2.56 38.05 5.01
4428 4491 1.021390 GTTCTGCATGAGTCCCGGTG 61.021 60.000 0.00 0.00 0.00 4.94
4429 4492 1.296715 GTTCTGCATGAGTCCCGGT 59.703 57.895 0.00 0.00 0.00 5.28
4430 4493 1.450312 GGTTCTGCATGAGTCCCGG 60.450 63.158 0.00 0.00 0.00 5.73
4431 4494 1.450312 GGGTTCTGCATGAGTCCCG 60.450 63.158 0.00 0.00 33.49 5.14
4432 4495 0.393537 CTGGGTTCTGCATGAGTCCC 60.394 60.000 0.00 14.97 39.45 4.46
4433 4496 0.326264 ACTGGGTTCTGCATGAGTCC 59.674 55.000 0.00 0.00 0.00 3.85
4434 4497 2.028112 TGTACTGGGTTCTGCATGAGTC 60.028 50.000 0.00 0.00 0.00 3.36
4435 4498 1.977854 TGTACTGGGTTCTGCATGAGT 59.022 47.619 0.00 0.00 0.00 3.41
4436 4499 2.768253 TGTACTGGGTTCTGCATGAG 57.232 50.000 0.00 0.00 0.00 2.90
4437 4500 2.418609 CGATGTACTGGGTTCTGCATGA 60.419 50.000 0.00 0.00 0.00 3.07
4438 4501 1.935873 CGATGTACTGGGTTCTGCATG 59.064 52.381 0.00 0.00 0.00 4.06
4439 4502 1.134401 CCGATGTACTGGGTTCTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
4440 4503 0.249120 CCGATGTACTGGGTTCTGCA 59.751 55.000 0.00 0.00 0.00 4.41
4441 4504 0.462047 CCCGATGTACTGGGTTCTGC 60.462 60.000 9.48 0.00 40.76 4.26
4442 4505 0.178068 CCCCGATGTACTGGGTTCTG 59.822 60.000 14.66 0.00 44.44 3.02
4443 4506 0.981277 CCCCCGATGTACTGGGTTCT 60.981 60.000 14.66 0.00 44.44 3.01
4444 4507 1.525442 CCCCCGATGTACTGGGTTC 59.475 63.158 14.66 0.00 44.44 3.62
4445 4508 3.735725 CCCCCGATGTACTGGGTT 58.264 61.111 14.66 0.00 44.44 4.11
4459 4522 0.256177 AATTTTCTCTCTCCGCCCCC 59.744 55.000 0.00 0.00 0.00 5.40
4460 4523 2.130272 AAATTTTCTCTCTCCGCCCC 57.870 50.000 0.00 0.00 0.00 5.80
4461 4524 2.416027 GCAAAATTTTCTCTCTCCGCCC 60.416 50.000 0.00 0.00 0.00 6.13
4462 4525 2.228822 TGCAAAATTTTCTCTCTCCGCC 59.771 45.455 0.00 0.00 0.00 6.13
4463 4526 3.559238 TGCAAAATTTTCTCTCTCCGC 57.441 42.857 0.00 0.00 0.00 5.54
4464 4527 3.855950 GCATGCAAAATTTTCTCTCTCCG 59.144 43.478 14.21 0.00 0.00 4.63
4465 4528 4.624452 GTGCATGCAAAATTTTCTCTCTCC 59.376 41.667 24.58 0.00 0.00 3.71
4466 4529 5.467705 AGTGCATGCAAAATTTTCTCTCTC 58.532 37.500 24.58 4.38 0.00 3.20
4467 4530 5.464030 AGTGCATGCAAAATTTTCTCTCT 57.536 34.783 24.58 7.62 0.00 3.10
4468 4531 5.107220 CCAAGTGCATGCAAAATTTTCTCTC 60.107 40.000 24.58 5.09 0.00 3.20
4469 4532 4.753107 CCAAGTGCATGCAAAATTTTCTCT 59.247 37.500 24.58 9.00 0.00 3.10
4470 4533 4.612033 GCCAAGTGCATGCAAAATTTTCTC 60.612 41.667 24.58 6.49 40.77 2.87
4471 4534 3.251487 GCCAAGTGCATGCAAAATTTTCT 59.749 39.130 24.58 10.63 40.77 2.52
4472 4535 3.557508 GCCAAGTGCATGCAAAATTTTC 58.442 40.909 24.58 8.13 40.77 2.29
4473 4536 2.293955 GGCCAAGTGCATGCAAAATTTT 59.706 40.909 24.58 9.21 43.89 1.82
4474 4537 1.881324 GGCCAAGTGCATGCAAAATTT 59.119 42.857 24.58 11.77 43.89 1.82
4475 4538 1.525941 GGCCAAGTGCATGCAAAATT 58.474 45.000 24.58 14.80 43.89 1.82
4476 4539 0.321830 GGGCCAAGTGCATGCAAAAT 60.322 50.000 24.58 8.86 43.89 1.82
4477 4540 1.071128 GGGCCAAGTGCATGCAAAA 59.929 52.632 24.58 0.00 43.89 2.44
4478 4541 1.481901 ATGGGCCAAGTGCATGCAAA 61.482 50.000 24.58 0.00 43.89 3.68
4479 4542 0.614134 TATGGGCCAAGTGCATGCAA 60.614 50.000 24.58 4.09 43.89 4.08
4480 4543 1.000107 TATGGGCCAAGTGCATGCA 60.000 52.632 18.46 18.46 43.89 3.96
4481 4544 1.039233 ACTATGGGCCAAGTGCATGC 61.039 55.000 11.89 11.82 43.89 4.06
4482 4545 1.027357 GACTATGGGCCAAGTGCATG 58.973 55.000 21.00 6.25 43.89 4.06
4483 4546 0.625316 TGACTATGGGCCAAGTGCAT 59.375 50.000 21.00 0.00 43.89 3.96
4484 4547 0.035152 CTGACTATGGGCCAAGTGCA 60.035 55.000 21.00 16.90 43.89 4.57
4485 4548 1.379642 GCTGACTATGGGCCAAGTGC 61.380 60.000 21.00 16.17 40.16 4.40
4486 4549 0.749454 GGCTGACTATGGGCCAAGTG 60.749 60.000 21.00 12.61 44.69 3.16
4487 4550 1.609783 GGCTGACTATGGGCCAAGT 59.390 57.895 11.89 15.58 44.69 3.16
4488 4551 4.567318 GGCTGACTATGGGCCAAG 57.433 61.111 11.89 12.19 44.69 3.61
4491 4554 2.823758 GGGAGGCTGACTATGGGCC 61.824 68.421 0.00 0.00 45.57 5.80
4492 4555 2.072487 TGGGAGGCTGACTATGGGC 61.072 63.158 0.00 0.00 0.00 5.36
4493 4556 0.692419 AGTGGGAGGCTGACTATGGG 60.692 60.000 0.00 0.00 0.00 4.00
4494 4557 0.755686 GAGTGGGAGGCTGACTATGG 59.244 60.000 0.00 0.00 0.00 2.74
4495 4558 1.686052 GAGAGTGGGAGGCTGACTATG 59.314 57.143 0.00 0.00 0.00 2.23
4496 4559 1.573376 AGAGAGTGGGAGGCTGACTAT 59.427 52.381 0.00 0.00 0.00 2.12
4497 4560 1.003646 AGAGAGTGGGAGGCTGACTA 58.996 55.000 0.00 0.00 0.00 2.59
4498 4561 0.324275 GAGAGAGTGGGAGGCTGACT 60.324 60.000 0.00 0.00 0.00 3.41
4499 4562 0.324275 AGAGAGAGTGGGAGGCTGAC 60.324 60.000 0.00 0.00 0.00 3.51
4500 4563 0.411452 AAGAGAGAGTGGGAGGCTGA 59.589 55.000 0.00 0.00 0.00 4.26
4501 4564 1.206849 GAAAGAGAGAGTGGGAGGCTG 59.793 57.143 0.00 0.00 0.00 4.85
4502 4565 1.567357 GAAAGAGAGAGTGGGAGGCT 58.433 55.000 0.00 0.00 0.00 4.58
4503 4566 0.539518 GGAAAGAGAGAGTGGGAGGC 59.460 60.000 0.00 0.00 0.00 4.70
4504 4567 2.246091 AGGAAAGAGAGAGTGGGAGG 57.754 55.000 0.00 0.00 0.00 4.30
4505 4568 2.499693 GGAAGGAAAGAGAGAGTGGGAG 59.500 54.545 0.00 0.00 0.00 4.30
4506 4569 2.112691 AGGAAGGAAAGAGAGAGTGGGA 59.887 50.000 0.00 0.00 0.00 4.37
4507 4570 2.545810 AGGAAGGAAAGAGAGAGTGGG 58.454 52.381 0.00 0.00 0.00 4.61
4508 4571 4.632327 AAAGGAAGGAAAGAGAGAGTGG 57.368 45.455 0.00 0.00 0.00 4.00
4509 4572 6.295249 AGAAAAAGGAAGGAAAGAGAGAGTG 58.705 40.000 0.00 0.00 0.00 3.51
4510 4573 6.465178 GGAGAAAAAGGAAGGAAAGAGAGAGT 60.465 42.308 0.00 0.00 0.00 3.24
4511 4574 5.937540 GGAGAAAAAGGAAGGAAAGAGAGAG 59.062 44.000 0.00 0.00 0.00 3.20
4512 4575 5.511545 CGGAGAAAAAGGAAGGAAAGAGAGA 60.512 44.000 0.00 0.00 0.00 3.10
4513 4576 4.693095 CGGAGAAAAAGGAAGGAAAGAGAG 59.307 45.833 0.00 0.00 0.00 3.20
4514 4577 4.505039 CCGGAGAAAAAGGAAGGAAAGAGA 60.505 45.833 0.00 0.00 0.00 3.10
4515 4578 3.753797 CCGGAGAAAAAGGAAGGAAAGAG 59.246 47.826 0.00 0.00 0.00 2.85
4516 4579 3.497942 CCCGGAGAAAAAGGAAGGAAAGA 60.498 47.826 0.73 0.00 0.00 2.52
4517 4580 2.820197 CCCGGAGAAAAAGGAAGGAAAG 59.180 50.000 0.73 0.00 0.00 2.62
4518 4581 2.176148 ACCCGGAGAAAAAGGAAGGAAA 59.824 45.455 0.73 0.00 0.00 3.13
4519 4582 1.778484 ACCCGGAGAAAAAGGAAGGAA 59.222 47.619 0.73 0.00 0.00 3.36
4520 4583 1.350019 GACCCGGAGAAAAAGGAAGGA 59.650 52.381 0.73 0.00 0.00 3.36
4521 4584 1.613520 GGACCCGGAGAAAAAGGAAGG 60.614 57.143 0.73 0.00 0.00 3.46
4522 4585 1.613520 GGGACCCGGAGAAAAAGGAAG 60.614 57.143 0.73 0.00 0.00 3.46
4523 4586 0.402887 GGGACCCGGAGAAAAAGGAA 59.597 55.000 0.73 0.00 0.00 3.36
4524 4587 0.768997 TGGGACCCGGAGAAAAAGGA 60.769 55.000 0.73 0.00 0.00 3.36
4525 4588 0.331616 ATGGGACCCGGAGAAAAAGG 59.668 55.000 0.73 0.00 0.00 3.11
4526 4589 1.682087 GGATGGGACCCGGAGAAAAAG 60.682 57.143 0.73 0.00 0.00 2.27
4527 4590 0.330267 GGATGGGACCCGGAGAAAAA 59.670 55.000 0.73 0.00 0.00 1.94
4528 4591 0.842905 TGGATGGGACCCGGAGAAAA 60.843 55.000 0.73 0.00 0.00 2.29
4529 4592 1.229690 TGGATGGGACCCGGAGAAA 60.230 57.895 0.73 0.00 0.00 2.52
4530 4593 1.993391 GTGGATGGGACCCGGAGAA 60.993 63.158 0.73 0.00 0.00 2.87
4531 4594 2.365105 GTGGATGGGACCCGGAGA 60.365 66.667 0.73 0.00 0.00 3.71
4532 4595 0.689745 TAAGTGGATGGGACCCGGAG 60.690 60.000 0.73 0.00 0.00 4.63
4533 4596 0.979187 GTAAGTGGATGGGACCCGGA 60.979 60.000 0.73 0.00 0.00 5.14
4534 4597 1.268992 TGTAAGTGGATGGGACCCGG 61.269 60.000 5.91 0.00 0.00 5.73
4535 4598 0.107848 GTGTAAGTGGATGGGACCCG 60.108 60.000 5.91 0.00 0.00 5.28
4536 4599 0.107848 CGTGTAAGTGGATGGGACCC 60.108 60.000 2.45 2.45 0.00 4.46
4537 4600 0.743345 GCGTGTAAGTGGATGGGACC 60.743 60.000 0.00 0.00 0.00 4.46
4538 4601 0.743345 GGCGTGTAAGTGGATGGGAC 60.743 60.000 0.00 0.00 0.00 4.46
4539 4602 1.600107 GGCGTGTAAGTGGATGGGA 59.400 57.895 0.00 0.00 0.00 4.37
4540 4603 1.451387 GGGCGTGTAAGTGGATGGG 60.451 63.158 0.00 0.00 0.00 4.00
4541 4604 0.035439 AAGGGCGTGTAAGTGGATGG 60.035 55.000 0.00 0.00 0.00 3.51
4542 4605 1.737793 GAAAGGGCGTGTAAGTGGATG 59.262 52.381 0.00 0.00 0.00 3.51
4543 4606 1.628846 AGAAAGGGCGTGTAAGTGGAT 59.371 47.619 0.00 0.00 0.00 3.41
4544 4607 1.053424 AGAAAGGGCGTGTAAGTGGA 58.947 50.000 0.00 0.00 0.00 4.02
4545 4608 1.892209 AAGAAAGGGCGTGTAAGTGG 58.108 50.000 0.00 0.00 0.00 4.00
4546 4609 3.606153 CGAAAAGAAAGGGCGTGTAAGTG 60.606 47.826 0.00 0.00 0.00 3.16
4547 4610 2.546789 CGAAAAGAAAGGGCGTGTAAGT 59.453 45.455 0.00 0.00 0.00 2.24
4548 4611 2.546789 ACGAAAAGAAAGGGCGTGTAAG 59.453 45.455 0.00 0.00 33.52 2.34
4549 4612 2.563702 ACGAAAAGAAAGGGCGTGTAA 58.436 42.857 0.00 0.00 33.52 2.41
4550 4613 2.243602 ACGAAAAGAAAGGGCGTGTA 57.756 45.000 0.00 0.00 33.52 2.90
4551 4614 1.332686 GAACGAAAAGAAAGGGCGTGT 59.667 47.619 0.00 0.00 35.16 4.49
4552 4615 1.602377 AGAACGAAAAGAAAGGGCGTG 59.398 47.619 0.00 0.00 35.16 5.34
4553 4616 1.871676 GAGAACGAAAAGAAAGGGCGT 59.128 47.619 0.00 0.00 36.68 5.68
4554 4617 2.143925 AGAGAACGAAAAGAAAGGGCG 58.856 47.619 0.00 0.00 0.00 6.13
4555 4618 2.484651 GGAGAGAACGAAAAGAAAGGGC 59.515 50.000 0.00 0.00 0.00 5.19
4556 4619 3.498777 GTGGAGAGAACGAAAAGAAAGGG 59.501 47.826 0.00 0.00 0.00 3.95
4557 4620 3.498777 GGTGGAGAGAACGAAAAGAAAGG 59.501 47.826 0.00 0.00 0.00 3.11
4558 4621 4.024809 GTGGTGGAGAGAACGAAAAGAAAG 60.025 45.833 0.00 0.00 0.00 2.62
4559 4622 3.875134 GTGGTGGAGAGAACGAAAAGAAA 59.125 43.478 0.00 0.00 0.00 2.52
4560 4623 3.118555 TGTGGTGGAGAGAACGAAAAGAA 60.119 43.478 0.00 0.00 0.00 2.52
4561 4624 2.432874 TGTGGTGGAGAGAACGAAAAGA 59.567 45.455 0.00 0.00 0.00 2.52
4562 4625 2.833794 TGTGGTGGAGAGAACGAAAAG 58.166 47.619 0.00 0.00 0.00 2.27
4563 4626 2.992124 TGTGGTGGAGAGAACGAAAA 57.008 45.000 0.00 0.00 0.00 2.29
4564 4627 3.485463 AATGTGGTGGAGAGAACGAAA 57.515 42.857 0.00 0.00 0.00 3.46
4565 4628 3.485463 AAATGTGGTGGAGAGAACGAA 57.515 42.857 0.00 0.00 0.00 3.85
4566 4629 3.071023 AGAAAATGTGGTGGAGAGAACGA 59.929 43.478 0.00 0.00 0.00 3.85
4567 4630 3.403038 AGAAAATGTGGTGGAGAGAACG 58.597 45.455 0.00 0.00 0.00 3.95
4568 4631 4.083802 CGAAGAAAATGTGGTGGAGAGAAC 60.084 45.833 0.00 0.00 0.00 3.01
4569 4632 4.065088 CGAAGAAAATGTGGTGGAGAGAA 58.935 43.478 0.00 0.00 0.00 2.87
4570 4633 3.557054 CCGAAGAAAATGTGGTGGAGAGA 60.557 47.826 0.00 0.00 0.00 3.10
4571 4634 2.744202 CCGAAGAAAATGTGGTGGAGAG 59.256 50.000 0.00 0.00 0.00 3.20
4572 4635 2.552155 CCCGAAGAAAATGTGGTGGAGA 60.552 50.000 0.00 0.00 0.00 3.71
4573 4636 1.812571 CCCGAAGAAAATGTGGTGGAG 59.187 52.381 0.00 0.00 0.00 3.86
4574 4637 1.904287 CCCGAAGAAAATGTGGTGGA 58.096 50.000 0.00 0.00 0.00 4.02
4575 4638 0.243636 GCCCGAAGAAAATGTGGTGG 59.756 55.000 0.00 0.00 0.00 4.61
4576 4639 0.243636 GGCCCGAAGAAAATGTGGTG 59.756 55.000 0.00 0.00 0.00 4.17
4577 4640 1.241315 CGGCCCGAAGAAAATGTGGT 61.241 55.000 0.00 0.00 0.00 4.16
4578 4641 1.506262 CGGCCCGAAGAAAATGTGG 59.494 57.895 0.00 0.00 0.00 4.17
4579 4642 1.154035 GCGGCCCGAAGAAAATGTG 60.154 57.895 7.68 0.00 0.00 3.21
4580 4643 1.602323 TGCGGCCCGAAGAAAATGT 60.602 52.632 7.68 0.00 0.00 2.71
4581 4644 1.154035 GTGCGGCCCGAAGAAAATG 60.154 57.895 7.68 0.00 0.00 2.32
4582 4645 1.602323 TGTGCGGCCCGAAGAAAAT 60.602 52.632 7.68 0.00 0.00 1.82
4583 4646 2.203224 TGTGCGGCCCGAAGAAAA 60.203 55.556 7.68 0.00 0.00 2.29
4584 4647 2.975799 GTGTGCGGCCCGAAGAAA 60.976 61.111 7.68 0.00 0.00 2.52
4585 4648 3.936203 AGTGTGCGGCCCGAAGAA 61.936 61.111 7.68 0.00 0.00 2.52
4586 4649 4.680237 CAGTGTGCGGCCCGAAGA 62.680 66.667 7.68 0.00 0.00 2.87
4630 4693 4.016706 GTGGTGGAGGTGGACCCG 62.017 72.222 0.00 0.00 38.74 5.28
4631 4694 3.647771 GGTGGTGGAGGTGGACCC 61.648 72.222 0.00 0.00 36.42 4.46
4632 4695 4.016706 CGGTGGTGGAGGTGGACC 62.017 72.222 0.00 0.00 0.00 4.46
4633 4696 4.699522 GCGGTGGTGGAGGTGGAC 62.700 72.222 0.00 0.00 0.00 4.02
4669 4732 2.506217 TACTTCTTCGCGGCGCAG 60.506 61.111 32.61 22.25 0.00 5.18
4670 4733 2.506217 CTACTTCTTCGCGGCGCA 60.506 61.111 32.61 16.23 0.00 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.