Multiple sequence alignment - TraesCS7A01G281100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G281100 chr7A 100.000 2721 0 0 1 2721 303752210 303749490 0.000000e+00 5025
1 TraesCS7A01G281100 chr7A 95.619 388 16 1 2334 2721 537969956 537970342 2.980000e-174 621
2 TraesCS7A01G281100 chr7A 94.588 388 20 1 2334 2721 332949067 332948681 1.390000e-167 599
3 TraesCS7A01G281100 chr3D 96.355 2332 84 1 3 2333 516403646 516401315 0.000000e+00 3834
4 TraesCS7A01G281100 chr3D 95.799 2333 95 3 3 2333 465175709 465178040 0.000000e+00 3762
5 TraesCS7A01G281100 chr1D 96.134 2328 88 2 3 2328 487307356 487305029 0.000000e+00 3799
6 TraesCS7A01G281100 chr1D 95.757 2333 92 5 3 2333 30698287 30695960 0.000000e+00 3753
7 TraesCS7A01G281100 chr1D 95.876 388 14 2 2334 2721 214891450 214891835 6.400000e-176 627
8 TraesCS7A01G281100 chr2B 95.163 2336 106 5 3 2333 431374 433707 0.000000e+00 3681
9 TraesCS7A01G281100 chr5A 94.525 2338 103 11 1 2333 168957361 168959678 0.000000e+00 3585
10 TraesCS7A01G281100 chr5A 94.072 388 22 1 2334 2721 452884116 452883730 3.020000e-164 588
11 TraesCS7A01G281100 chr6A 94.430 2334 94 12 1 2333 276499083 276501381 0.000000e+00 3557
12 TraesCS7A01G281100 chr1B 92.701 2055 136 11 3 2054 40302755 40300712 0.000000e+00 2952
13 TraesCS7A01G281100 chr4B 91.979 2057 156 8 1 2054 272432831 272430781 0.000000e+00 2876
14 TraesCS7A01G281100 chr3A 95.579 1538 66 2 1 1536 706202332 706203869 0.000000e+00 2462
15 TraesCS7A01G281100 chr3A 94.602 389 19 2 2334 2721 475670428 475670815 3.880000e-168 601
16 TraesCS7A01G281100 chr1A 96.204 764 29 0 1570 2333 347417584 347416821 0.000000e+00 1251
17 TraesCS7A01G281100 chr1A 94.359 390 19 3 2334 2721 154566099 154565711 1.800000e-166 595
18 TraesCS7A01G281100 chr7D 94.330 388 20 2 2334 2721 429774609 429774994 6.490000e-166 593
19 TraesCS7A01G281100 chr7D 94.286 385 21 1 2337 2721 422464494 422464111 3.020000e-164 588
20 TraesCS7A01G281100 chr6D 94.301 386 19 2 2337 2721 216886304 216885921 3.020000e-164 588
21 TraesCS7A01G281100 chr6B 93.522 247 15 1 2089 2335 658921664 658921419 1.540000e-97 366


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G281100 chr7A 303749490 303752210 2720 True 5025 5025 100.000 1 2721 1 chr7A.!!$R1 2720
1 TraesCS7A01G281100 chr3D 516401315 516403646 2331 True 3834 3834 96.355 3 2333 1 chr3D.!!$R1 2330
2 TraesCS7A01G281100 chr3D 465175709 465178040 2331 False 3762 3762 95.799 3 2333 1 chr3D.!!$F1 2330
3 TraesCS7A01G281100 chr1D 487305029 487307356 2327 True 3799 3799 96.134 3 2328 1 chr1D.!!$R2 2325
4 TraesCS7A01G281100 chr1D 30695960 30698287 2327 True 3753 3753 95.757 3 2333 1 chr1D.!!$R1 2330
5 TraesCS7A01G281100 chr2B 431374 433707 2333 False 3681 3681 95.163 3 2333 1 chr2B.!!$F1 2330
6 TraesCS7A01G281100 chr5A 168957361 168959678 2317 False 3585 3585 94.525 1 2333 1 chr5A.!!$F1 2332
7 TraesCS7A01G281100 chr6A 276499083 276501381 2298 False 3557 3557 94.430 1 2333 1 chr6A.!!$F1 2332
8 TraesCS7A01G281100 chr1B 40300712 40302755 2043 True 2952 2952 92.701 3 2054 1 chr1B.!!$R1 2051
9 TraesCS7A01G281100 chr4B 272430781 272432831 2050 True 2876 2876 91.979 1 2054 1 chr4B.!!$R1 2053
10 TraesCS7A01G281100 chr3A 706202332 706203869 1537 False 2462 2462 95.579 1 1536 1 chr3A.!!$F2 1535
11 TraesCS7A01G281100 chr1A 347416821 347417584 763 True 1251 1251 96.204 1570 2333 1 chr1A.!!$R2 763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
989 1003 1.395826 GGCACTGCCGAGATAGAGGT 61.396 60.0 3.73 0.0 39.62 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2670 2690 0.108329 CAACGCGAGGTATTCCCTGT 60.108 55.0 15.93 0.0 46.51 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.047021 TCCTTGTTGATTGAAACCAAACACA 60.047 36.000 0.00 0.00 0.00 3.72
39 40 3.441496 CAAACACATTGGACACTGCTT 57.559 42.857 0.00 0.00 35.27 3.91
40 41 3.784338 CAAACACATTGGACACTGCTTT 58.216 40.909 0.00 0.00 35.27 3.51
86 87 7.832187 TGGCTAATTGCTTGGTTAGTTTACTAT 59.168 33.333 0.00 0.00 42.39 2.12
132 134 6.672266 TGATTGGAACTGAGAGAGTAACTT 57.328 37.500 0.00 0.00 33.09 2.66
139 141 5.907866 ACTGAGAGAGTAACTTAGAAGCC 57.092 43.478 0.00 0.00 30.86 4.35
300 302 3.245284 CCCTACAAATCATCGCTTACACG 59.755 47.826 0.00 0.00 0.00 4.49
721 732 5.631992 GCAGGTTTCCGAAGAAAGAAATAG 58.368 41.667 0.00 0.00 42.60 1.73
738 749 3.558931 ATAGTCAATGCCATTCGGTGA 57.441 42.857 0.00 0.00 33.28 4.02
877 891 6.976934 ACCATTTTTCAGCCTTCTTTTCTA 57.023 33.333 0.00 0.00 0.00 2.10
935 949 7.829706 TGCCAATTATGTACCTATTGTTGTGTA 59.170 33.333 9.46 0.00 0.00 2.90
964 978 4.819761 GAGGCGCCGCACTCATCA 62.820 66.667 26.33 0.00 33.95 3.07
989 1003 1.395826 GGCACTGCCGAGATAGAGGT 61.396 60.000 3.73 0.00 39.62 3.85
1223 1237 6.070251 TGCTGAATTACCCTCATGAACTCTTA 60.070 38.462 0.00 0.00 0.00 2.10
1226 1240 8.603898 TGAATTACCCTCATGAACTCTTACTA 57.396 34.615 0.00 0.00 0.00 1.82
1308 1322 7.775093 AGCAGTGTCTATTATGCTTTTAATCCA 59.225 33.333 0.00 0.00 46.46 3.41
1314 1328 9.599322 GTCTATTATGCTTTTAATCCATCAACG 57.401 33.333 0.00 0.00 0.00 4.10
1451 1465 3.071479 GGAATACTTTCAGGTCGCAACA 58.929 45.455 0.00 0.00 33.23 3.33
1658 1672 1.677820 GGGTGCGTGGCAAGTATACTT 60.678 52.381 12.50 12.50 41.47 2.24
1660 1674 1.664151 GTGCGTGGCAAGTATACTTCC 59.336 52.381 15.35 17.81 41.47 3.46
1697 1715 3.744238 TCCTGTTTCACGATGAAGACA 57.256 42.857 0.00 3.19 37.70 3.41
1842 1860 5.877012 TGCTGTCAAGAGAATATTCAGGTTC 59.123 40.000 17.56 6.31 0.00 3.62
1844 1862 7.093333 TGCTGTCAAGAGAATATTCAGGTTCTA 60.093 37.037 17.56 0.00 34.97 2.10
1869 1887 7.337480 CATCACATTTGGATGTTATTCCTCA 57.663 36.000 0.00 0.00 43.92 3.86
2192 2212 2.330440 ACGGTTCCTTTTACCAACGT 57.670 45.000 0.00 0.00 35.31 3.99
2238 2258 4.503991 GCTAGCAACACTGGATAAGGCTAT 60.504 45.833 10.63 0.00 32.59 2.97
2267 2287 2.818130 ACCGTTGGTAAAGACGCTAA 57.182 45.000 0.00 0.00 37.91 3.09
2333 2353 1.349067 GAGGGGTCCTGTTGTAGTGT 58.651 55.000 0.00 0.00 31.76 3.55
2334 2354 1.002087 GAGGGGTCCTGTTGTAGTGTG 59.998 57.143 0.00 0.00 31.76 3.82
2335 2355 0.036306 GGGGTCCTGTTGTAGTGTGG 59.964 60.000 0.00 0.00 0.00 4.17
2336 2356 0.763035 GGGTCCTGTTGTAGTGTGGT 59.237 55.000 0.00 0.00 0.00 4.16
2337 2357 1.972795 GGGTCCTGTTGTAGTGTGGTA 59.027 52.381 0.00 0.00 0.00 3.25
2338 2358 2.289257 GGGTCCTGTTGTAGTGTGGTAC 60.289 54.545 0.00 0.00 0.00 3.34
2339 2359 2.289257 GGTCCTGTTGTAGTGTGGTACC 60.289 54.545 4.43 4.43 0.00 3.34
2340 2360 2.366266 GTCCTGTTGTAGTGTGGTACCA 59.634 50.000 11.60 11.60 0.00 3.25
2341 2361 2.366266 TCCTGTTGTAGTGTGGTACCAC 59.634 50.000 33.97 33.97 46.33 4.16
2353 2373 3.537580 GTGGTACCACAGAAGTTCAACA 58.462 45.455 35.21 0.00 45.53 3.33
2354 2374 3.942748 GTGGTACCACAGAAGTTCAACAA 59.057 43.478 35.21 0.00 45.53 2.83
2355 2375 3.942748 TGGTACCACAGAAGTTCAACAAC 59.057 43.478 11.60 0.00 0.00 3.32
2356 2376 3.942748 GGTACCACAGAAGTTCAACAACA 59.057 43.478 7.15 0.00 34.60 3.33
2357 2377 4.201881 GGTACCACAGAAGTTCAACAACAC 60.202 45.833 7.15 0.00 34.60 3.32
2358 2378 3.686016 ACCACAGAAGTTCAACAACACT 58.314 40.909 5.50 0.00 34.60 3.55
2359 2379 3.440173 ACCACAGAAGTTCAACAACACTG 59.560 43.478 5.50 0.00 41.17 3.66
2360 2380 3.440173 CCACAGAAGTTCAACAACACTGT 59.560 43.478 5.50 0.00 45.09 3.55
2362 2382 5.460646 CACAGAAGTTCAACAACACTGTTT 58.539 37.500 5.50 0.00 43.45 2.83
2363 2383 5.920273 CACAGAAGTTCAACAACACTGTTTT 59.080 36.000 5.50 0.00 43.45 2.43
2364 2384 7.081349 CACAGAAGTTCAACAACACTGTTTTA 58.919 34.615 5.50 0.00 43.45 1.52
2365 2385 7.593273 CACAGAAGTTCAACAACACTGTTTTAA 59.407 33.333 5.50 0.00 43.45 1.52
2366 2386 7.807907 ACAGAAGTTCAACAACACTGTTTTAAG 59.192 33.333 5.50 0.00 43.45 1.85
2367 2387 8.020819 CAGAAGTTCAACAACACTGTTTTAAGA 58.979 33.333 5.50 0.00 43.45 2.10
2368 2388 8.573035 AGAAGTTCAACAACACTGTTTTAAGAA 58.427 29.630 5.50 0.00 43.45 2.52
2369 2389 9.187455 GAAGTTCAACAACACTGTTTTAAGAAA 57.813 29.630 0.00 0.00 43.45 2.52
2370 2390 9.535878 AAGTTCAACAACACTGTTTTAAGAAAA 57.464 25.926 0.00 0.00 43.45 2.29
2371 2391 9.535878 AGTTCAACAACACTGTTTTAAGAAAAA 57.464 25.926 0.00 0.00 43.45 1.94
2393 2413 7.391148 AAAAATTGAGTGTGACACTACAAGT 57.609 32.000 19.46 18.60 45.44 3.16
2394 2414 7.391148 AAAATTGAGTGTGACACTACAAGTT 57.609 32.000 23.96 23.96 45.44 2.66
2395 2415 8.500753 AAAATTGAGTGTGACACTACAAGTTA 57.499 30.769 26.83 12.92 45.44 2.24
2396 2416 7.715265 AATTGAGTGTGACACTACAAGTTAG 57.285 36.000 19.46 0.00 45.44 2.34
2397 2417 5.847111 TGAGTGTGACACTACAAGTTAGT 57.153 39.130 19.46 0.00 45.44 2.24
2398 2418 5.828747 TGAGTGTGACACTACAAGTTAGTC 58.171 41.667 19.46 2.81 45.44 2.59
2399 2419 5.197682 AGTGTGACACTACAAGTTAGTCC 57.802 43.478 17.91 0.00 43.46 3.85
2400 2420 4.894114 AGTGTGACACTACAAGTTAGTCCT 59.106 41.667 17.91 0.00 43.46 3.85
2401 2421 6.066690 AGTGTGACACTACAAGTTAGTCCTA 58.933 40.000 17.91 0.00 43.46 2.94
2402 2422 6.016443 AGTGTGACACTACAAGTTAGTCCTAC 60.016 42.308 17.91 0.00 43.46 3.18
2403 2423 6.016443 GTGTGACACTACAAGTTAGTCCTACT 60.016 42.308 8.76 0.00 31.36 2.57
2404 2424 6.016527 TGTGACACTACAAGTTAGTCCTACTG 60.017 42.308 7.20 0.00 0.00 2.74
2405 2425 5.048224 TGACACTACAAGTTAGTCCTACTGC 60.048 44.000 0.00 0.00 0.00 4.40
2406 2426 5.078256 ACACTACAAGTTAGTCCTACTGCT 58.922 41.667 0.00 0.00 0.00 4.24
2407 2427 6.243900 ACACTACAAGTTAGTCCTACTGCTA 58.756 40.000 0.00 0.00 0.00 3.49
2408 2428 6.150809 ACACTACAAGTTAGTCCTACTGCTAC 59.849 42.308 0.00 0.00 0.00 3.58
2409 2429 5.651576 ACTACAAGTTAGTCCTACTGCTACC 59.348 44.000 0.00 0.00 0.00 3.18
2410 2430 4.675038 ACAAGTTAGTCCTACTGCTACCT 58.325 43.478 0.00 0.00 0.00 3.08
2411 2431 4.463186 ACAAGTTAGTCCTACTGCTACCTG 59.537 45.833 0.00 0.00 0.00 4.00
2412 2432 4.319037 AGTTAGTCCTACTGCTACCTGT 57.681 45.455 0.00 0.00 0.00 4.00
2413 2433 4.017808 AGTTAGTCCTACTGCTACCTGTG 58.982 47.826 0.00 0.00 0.00 3.66
2414 2434 2.901338 AGTCCTACTGCTACCTGTGA 57.099 50.000 0.00 0.00 0.00 3.58
2415 2435 3.170991 AGTCCTACTGCTACCTGTGAA 57.829 47.619 0.00 0.00 0.00 3.18
2416 2436 3.093057 AGTCCTACTGCTACCTGTGAAG 58.907 50.000 0.00 0.00 0.00 3.02
2417 2437 2.826725 GTCCTACTGCTACCTGTGAAGT 59.173 50.000 0.00 0.00 0.00 3.01
2418 2438 3.258622 GTCCTACTGCTACCTGTGAAGTT 59.741 47.826 0.00 0.00 0.00 2.66
2419 2439 3.510360 TCCTACTGCTACCTGTGAAGTTC 59.490 47.826 0.00 0.00 0.00 3.01
2420 2440 3.258372 CCTACTGCTACCTGTGAAGTTCA 59.742 47.826 0.08 0.08 0.00 3.18
2421 2441 3.838244 ACTGCTACCTGTGAAGTTCAA 57.162 42.857 7.25 0.00 0.00 2.69
2422 2442 3.733337 ACTGCTACCTGTGAAGTTCAAG 58.267 45.455 7.25 7.49 0.00 3.02
2423 2443 2.481952 CTGCTACCTGTGAAGTTCAAGC 59.518 50.000 16.28 16.28 0.00 4.01
2424 2444 2.158827 TGCTACCTGTGAAGTTCAAGCA 60.159 45.455 20.19 20.19 34.13 3.91
2425 2445 2.224314 GCTACCTGTGAAGTTCAAGCAC 59.776 50.000 17.64 4.02 28.61 4.40
2426 2446 2.717639 ACCTGTGAAGTTCAAGCACT 57.282 45.000 7.25 0.00 33.83 4.40
2427 2447 2.292267 ACCTGTGAAGTTCAAGCACTG 58.708 47.619 7.25 0.02 33.83 3.66
2428 2448 1.605710 CCTGTGAAGTTCAAGCACTGG 59.394 52.381 7.25 5.62 42.48 4.00
2429 2449 2.292267 CTGTGAAGTTCAAGCACTGGT 58.708 47.619 7.25 0.00 33.83 4.00
2430 2450 3.466836 CTGTGAAGTTCAAGCACTGGTA 58.533 45.455 7.25 0.00 33.83 3.25
2431 2451 3.202906 TGTGAAGTTCAAGCACTGGTAC 58.797 45.455 7.25 0.00 33.83 3.34
2432 2452 2.548480 GTGAAGTTCAAGCACTGGTACC 59.452 50.000 7.25 4.43 0.00 3.34
2433 2453 2.171659 TGAAGTTCAAGCACTGGTACCA 59.828 45.455 15.39 15.39 0.00 3.25
2434 2454 2.256117 AGTTCAAGCACTGGTACCAC 57.744 50.000 11.60 0.94 0.00 4.16
2435 2455 1.488812 AGTTCAAGCACTGGTACCACA 59.511 47.619 11.60 0.00 0.00 4.17
2436 2456 1.873591 GTTCAAGCACTGGTACCACAG 59.126 52.381 11.60 7.51 44.03 3.66
2437 2457 1.419381 TCAAGCACTGGTACCACAGA 58.581 50.000 11.60 1.46 40.97 3.41
2438 2458 1.765904 TCAAGCACTGGTACCACAGAA 59.234 47.619 11.60 0.00 40.97 3.02
2439 2459 2.146342 CAAGCACTGGTACCACAGAAG 58.854 52.381 11.60 3.18 40.97 2.85
2440 2460 1.424638 AGCACTGGTACCACAGAAGT 58.575 50.000 11.60 3.93 40.97 3.01
2441 2461 1.768870 AGCACTGGTACCACAGAAGTT 59.231 47.619 11.60 0.00 40.97 2.66
2442 2462 2.143925 GCACTGGTACCACAGAAGTTC 58.856 52.381 11.60 0.00 40.97 3.01
2443 2463 2.484770 GCACTGGTACCACAGAAGTTCA 60.485 50.000 11.60 0.00 40.97 3.18
2444 2464 3.393800 CACTGGTACCACAGAAGTTCAG 58.606 50.000 11.60 0.00 40.97 3.02
2445 2465 2.224305 ACTGGTACCACAGAAGTTCAGC 60.224 50.000 11.60 0.00 40.97 4.26
2446 2466 1.765904 TGGTACCACAGAAGTTCAGCA 59.234 47.619 11.60 0.00 0.00 4.41
2447 2467 2.171659 TGGTACCACAGAAGTTCAGCAA 59.828 45.455 11.60 0.00 0.00 3.91
2448 2468 2.548480 GGTACCACAGAAGTTCAGCAAC 59.452 50.000 7.15 0.00 0.00 4.17
2449 2469 2.418368 ACCACAGAAGTTCAGCAACA 57.582 45.000 5.50 0.00 34.60 3.33
2450 2470 2.017049 ACCACAGAAGTTCAGCAACAC 58.983 47.619 5.50 0.00 34.60 3.32
2451 2471 2.292267 CCACAGAAGTTCAGCAACACT 58.708 47.619 5.50 0.00 34.60 3.55
2489 2509 8.839310 AATACATGTGACATTCTTAGATAGCC 57.161 34.615 9.11 0.00 0.00 3.93
2490 2510 6.239217 ACATGTGACATTCTTAGATAGCCA 57.761 37.500 0.00 0.00 0.00 4.75
2491 2511 6.835174 ACATGTGACATTCTTAGATAGCCAT 58.165 36.000 0.00 0.00 0.00 4.40
2492 2512 7.966812 ACATGTGACATTCTTAGATAGCCATA 58.033 34.615 0.00 0.00 0.00 2.74
2493 2513 7.875041 ACATGTGACATTCTTAGATAGCCATAC 59.125 37.037 0.00 0.00 0.00 2.39
2494 2514 6.759272 TGTGACATTCTTAGATAGCCATACC 58.241 40.000 0.00 0.00 0.00 2.73
2495 2515 5.864474 GTGACATTCTTAGATAGCCATACCG 59.136 44.000 0.00 0.00 0.00 4.02
2496 2516 4.822026 ACATTCTTAGATAGCCATACCGC 58.178 43.478 0.00 0.00 0.00 5.68
2497 2517 4.528596 ACATTCTTAGATAGCCATACCGCT 59.471 41.667 0.00 0.00 43.09 5.52
2498 2518 5.715279 ACATTCTTAGATAGCCATACCGCTA 59.285 40.000 0.00 0.00 45.11 4.26
2499 2519 5.899120 TTCTTAGATAGCCATACCGCTAG 57.101 43.478 0.00 0.00 44.28 3.42
2500 2520 5.175388 TCTTAGATAGCCATACCGCTAGA 57.825 43.478 0.00 0.00 44.28 2.43
2501 2521 5.756918 TCTTAGATAGCCATACCGCTAGAT 58.243 41.667 0.00 0.00 44.28 1.98
2502 2522 5.590663 TCTTAGATAGCCATACCGCTAGATG 59.409 44.000 0.00 0.00 44.28 2.90
2503 2523 3.702792 AGATAGCCATACCGCTAGATGT 58.297 45.455 0.00 0.00 44.28 3.06
2504 2524 3.445450 AGATAGCCATACCGCTAGATGTG 59.555 47.826 0.00 0.00 44.28 3.21
2505 2525 1.704641 AGCCATACCGCTAGATGTGA 58.295 50.000 0.00 0.00 37.32 3.58
2506 2526 2.039418 AGCCATACCGCTAGATGTGAA 58.961 47.619 0.00 0.00 37.32 3.18
2507 2527 2.036475 AGCCATACCGCTAGATGTGAAG 59.964 50.000 0.00 0.00 37.32 3.02
2508 2528 2.224066 GCCATACCGCTAGATGTGAAGT 60.224 50.000 0.00 0.00 0.00 3.01
2509 2529 3.741388 GCCATACCGCTAGATGTGAAGTT 60.741 47.826 0.00 0.00 0.00 2.66
2510 2530 4.051922 CCATACCGCTAGATGTGAAGTTC 58.948 47.826 0.00 0.00 0.00 3.01
2511 2531 4.441495 CCATACCGCTAGATGTGAAGTTCA 60.441 45.833 0.08 0.08 0.00 3.18
2512 2532 3.678056 ACCGCTAGATGTGAAGTTCAA 57.322 42.857 7.25 0.00 0.00 2.69
2513 2533 3.589988 ACCGCTAGATGTGAAGTTCAAG 58.410 45.455 7.25 2.03 0.00 3.02
2514 2534 3.006967 ACCGCTAGATGTGAAGTTCAAGT 59.993 43.478 7.25 0.00 0.00 3.16
2515 2535 4.219944 ACCGCTAGATGTGAAGTTCAAGTA 59.780 41.667 7.25 0.00 0.00 2.24
2516 2536 4.563184 CCGCTAGATGTGAAGTTCAAGTAC 59.437 45.833 7.25 0.00 0.00 2.73
2517 2537 5.403246 CGCTAGATGTGAAGTTCAAGTACT 58.597 41.667 7.25 7.58 0.00 2.73
2518 2538 5.864474 CGCTAGATGTGAAGTTCAAGTACTT 59.136 40.000 7.25 1.12 40.92 2.24
2519 2539 6.183360 CGCTAGATGTGAAGTTCAAGTACTTG 60.183 42.308 26.60 26.60 38.43 3.16
2520 2540 6.647067 GCTAGATGTGAAGTTCAAGTACTTGT 59.353 38.462 29.83 14.71 38.43 3.16
2521 2541 7.813148 GCTAGATGTGAAGTTCAAGTACTTGTA 59.187 37.037 29.83 20.90 38.43 2.41
2522 2542 7.948278 AGATGTGAAGTTCAAGTACTTGTAC 57.052 36.000 28.34 28.34 38.43 2.90
2523 2543 7.497595 AGATGTGAAGTTCAAGTACTTGTACA 58.502 34.615 33.39 25.83 41.41 2.90
2524 2544 7.985184 AGATGTGAAGTTCAAGTACTTGTACAA 59.015 33.333 33.39 20.76 41.41 2.41
2525 2545 7.298507 TGTGAAGTTCAAGTACTTGTACAAC 57.701 36.000 33.39 27.75 41.41 3.32
2526 2546 6.874664 TGTGAAGTTCAAGTACTTGTACAACA 59.125 34.615 33.39 29.48 41.41 3.33
2527 2547 7.551262 TGTGAAGTTCAAGTACTTGTACAACAT 59.449 33.333 33.39 23.65 41.41 2.71
2528 2548 9.037737 GTGAAGTTCAAGTACTTGTACAACATA 57.962 33.333 33.39 19.00 41.41 2.29
2529 2549 9.602568 TGAAGTTCAAGTACTTGTACAACATAA 57.397 29.630 33.39 18.45 41.41 1.90
2531 2551 9.609346 AAGTTCAAGTACTTGTACAACATAAGT 57.391 29.630 33.39 19.79 41.41 2.24
2532 2552 9.609346 AGTTCAAGTACTTGTACAACATAAGTT 57.391 29.630 33.39 16.02 41.41 2.66
2533 2553 9.859692 GTTCAAGTACTTGTACAACATAAGTTC 57.140 33.333 29.73 7.58 39.17 3.01
2534 2554 9.602568 TTCAAGTACTTGTACAACATAAGTTCA 57.397 29.630 29.83 6.91 39.17 3.18
2535 2555 9.037737 TCAAGTACTTGTACAACATAAGTTCAC 57.962 33.333 29.83 0.00 39.17 3.18
2536 2556 8.822855 CAAGTACTTGTACAACATAAGTTCACA 58.177 33.333 24.70 0.00 39.17 3.58
2537 2557 8.951787 AGTACTTGTACAACATAAGTTCACAA 57.048 30.769 3.59 7.11 39.17 3.33
2538 2558 9.555727 AGTACTTGTACAACATAAGTTCACAAT 57.444 29.630 3.59 3.48 39.17 2.71
2539 2559 9.807386 GTACTTGTACAACATAAGTTCACAATC 57.193 33.333 3.59 1.59 39.17 2.67
2540 2560 8.445275 ACTTGTACAACATAAGTTCACAATCA 57.555 30.769 3.59 0.00 38.24 2.57
2541 2561 8.898761 ACTTGTACAACATAAGTTCACAATCAA 58.101 29.630 3.59 0.00 38.24 2.57
2542 2562 9.897744 CTTGTACAACATAAGTTCACAATCAAT 57.102 29.630 3.59 0.00 38.24 2.57
2543 2563 9.676195 TTGTACAACATAAGTTCACAATCAATG 57.324 29.630 3.59 0.00 35.98 2.82
2544 2564 7.807433 TGTACAACATAAGTTCACAATCAATGC 59.193 33.333 0.00 0.00 35.28 3.56
2545 2565 6.747125 ACAACATAAGTTCACAATCAATGCA 58.253 32.000 0.00 0.00 35.28 3.96
2546 2566 7.208777 ACAACATAAGTTCACAATCAATGCAA 58.791 30.769 0.00 0.00 35.28 4.08
2547 2567 7.710044 ACAACATAAGTTCACAATCAATGCAAA 59.290 29.630 0.00 0.00 35.28 3.68
2548 2568 8.549548 CAACATAAGTTCACAATCAATGCAAAA 58.450 29.630 0.00 0.00 35.28 2.44
2549 2569 8.659925 ACATAAGTTCACAATCAATGCAAAAA 57.340 26.923 0.00 0.00 0.00 1.94
2590 2610 4.439305 TTTTATTCATGCAGACCAGTGC 57.561 40.909 0.00 0.00 44.27 4.40
2591 2611 2.042686 TATTCATGCAGACCAGTGCC 57.957 50.000 0.00 0.00 43.28 5.01
2592 2612 0.682209 ATTCATGCAGACCAGTGCCC 60.682 55.000 0.00 0.00 43.28 5.36
2593 2613 2.034532 CATGCAGACCAGTGCCCA 59.965 61.111 0.00 0.00 43.28 5.36
2594 2614 1.379443 CATGCAGACCAGTGCCCAT 60.379 57.895 0.00 0.00 43.28 4.00
2595 2615 1.077212 ATGCAGACCAGTGCCCATC 60.077 57.895 0.00 0.00 43.28 3.51
2596 2616 2.821366 GCAGACCAGTGCCCATCG 60.821 66.667 0.00 0.00 37.49 3.84
2597 2617 2.981302 CAGACCAGTGCCCATCGA 59.019 61.111 0.00 0.00 0.00 3.59
2598 2618 1.524002 CAGACCAGTGCCCATCGAT 59.476 57.895 0.00 0.00 0.00 3.59
2599 2619 0.812811 CAGACCAGTGCCCATCGATG 60.813 60.000 18.76 18.76 0.00 3.84
2601 2621 2.903855 CCAGTGCCCATCGATGGC 60.904 66.667 34.77 28.55 46.70 4.40
2626 2646 8.322906 CGAAAGCTATACCATAATCATTTCCA 57.677 34.615 0.00 0.00 0.00 3.53
2627 2647 8.783093 CGAAAGCTATACCATAATCATTTCCAA 58.217 33.333 0.00 0.00 0.00 3.53
2630 2650 8.995027 AGCTATACCATAATCATTTCCAAACA 57.005 30.769 0.00 0.00 0.00 2.83
2631 2651 8.850156 AGCTATACCATAATCATTTCCAAACAC 58.150 33.333 0.00 0.00 0.00 3.32
2632 2652 8.082242 GCTATACCATAATCATTTCCAAACACC 58.918 37.037 0.00 0.00 0.00 4.16
2633 2653 5.323371 ACCATAATCATTTCCAAACACCG 57.677 39.130 0.00 0.00 0.00 4.94
2634 2654 4.770010 ACCATAATCATTTCCAAACACCGT 59.230 37.500 0.00 0.00 0.00 4.83
2635 2655 5.105917 ACCATAATCATTTCCAAACACCGTC 60.106 40.000 0.00 0.00 0.00 4.79
2636 2656 3.934457 AATCATTTCCAAACACCGTCC 57.066 42.857 0.00 0.00 0.00 4.79
2637 2657 2.350057 TCATTTCCAAACACCGTCCA 57.650 45.000 0.00 0.00 0.00 4.02
2638 2658 1.950909 TCATTTCCAAACACCGTCCAC 59.049 47.619 0.00 0.00 0.00 4.02
2639 2659 1.678627 CATTTCCAAACACCGTCCACA 59.321 47.619 0.00 0.00 0.00 4.17
2640 2660 1.835494 TTTCCAAACACCGTCCACAA 58.165 45.000 0.00 0.00 0.00 3.33
2641 2661 1.384525 TTCCAAACACCGTCCACAAG 58.615 50.000 0.00 0.00 0.00 3.16
2642 2662 0.542333 TCCAAACACCGTCCACAAGA 59.458 50.000 0.00 0.00 0.00 3.02
2643 2663 1.142060 TCCAAACACCGTCCACAAGAT 59.858 47.619 0.00 0.00 0.00 2.40
2644 2664 2.369203 TCCAAACACCGTCCACAAGATA 59.631 45.455 0.00 0.00 0.00 1.98
2645 2665 3.008594 TCCAAACACCGTCCACAAGATAT 59.991 43.478 0.00 0.00 0.00 1.63
2646 2666 3.126858 CCAAACACCGTCCACAAGATATG 59.873 47.826 0.00 0.00 0.00 1.78
2647 2667 2.024176 ACACCGTCCACAAGATATGC 57.976 50.000 0.00 0.00 0.00 3.14
2648 2668 1.299541 CACCGTCCACAAGATATGCC 58.700 55.000 0.00 0.00 0.00 4.40
2649 2669 0.179084 ACCGTCCACAAGATATGCCG 60.179 55.000 0.00 0.00 0.00 5.69
2650 2670 0.179084 CCGTCCACAAGATATGCCGT 60.179 55.000 0.00 0.00 0.00 5.68
2651 2671 1.651987 CGTCCACAAGATATGCCGTT 58.348 50.000 0.00 0.00 0.00 4.44
2652 2672 1.327460 CGTCCACAAGATATGCCGTTG 59.673 52.381 0.00 0.00 0.00 4.10
2653 2673 1.670811 GTCCACAAGATATGCCGTTGG 59.329 52.381 0.00 0.00 0.00 3.77
2666 2686 1.452110 CCGTTGGCACATCATGAAGA 58.548 50.000 4.68 0.00 39.30 2.87
2667 2687 1.811965 CCGTTGGCACATCATGAAGAA 59.188 47.619 4.68 0.00 39.30 2.52
2668 2688 2.159476 CCGTTGGCACATCATGAAGAAG 60.159 50.000 4.68 0.00 39.30 2.85
2669 2689 2.485426 CGTTGGCACATCATGAAGAAGT 59.515 45.455 4.68 0.00 39.30 3.01
2670 2690 3.684305 CGTTGGCACATCATGAAGAAGTA 59.316 43.478 4.68 0.00 39.30 2.24
2671 2691 4.436050 CGTTGGCACATCATGAAGAAGTAC 60.436 45.833 4.68 0.00 39.30 2.73
2672 2692 4.284829 TGGCACATCATGAAGAAGTACA 57.715 40.909 4.68 0.42 0.00 2.90
2673 2693 4.256110 TGGCACATCATGAAGAAGTACAG 58.744 43.478 4.68 0.00 0.00 2.74
2674 2694 3.624861 GGCACATCATGAAGAAGTACAGG 59.375 47.826 4.68 0.00 0.00 4.00
2675 2695 3.624861 GCACATCATGAAGAAGTACAGGG 59.375 47.826 4.68 0.00 0.00 4.45
2676 2696 4.623886 GCACATCATGAAGAAGTACAGGGA 60.624 45.833 4.68 0.00 0.00 4.20
2677 2697 5.491070 CACATCATGAAGAAGTACAGGGAA 58.509 41.667 4.68 0.00 0.00 3.97
2678 2698 6.118170 CACATCATGAAGAAGTACAGGGAAT 58.882 40.000 4.68 0.00 0.00 3.01
2679 2699 7.275183 CACATCATGAAGAAGTACAGGGAATA 58.725 38.462 4.68 0.00 0.00 1.75
2680 2700 7.225538 CACATCATGAAGAAGTACAGGGAATAC 59.774 40.741 4.68 0.00 0.00 1.89
2681 2701 6.235231 TCATGAAGAAGTACAGGGAATACC 57.765 41.667 0.00 0.00 40.67 2.73
2690 2710 4.926207 GGGAATACCTCGCGTTGT 57.074 55.556 5.77 7.29 35.85 3.32
2691 2711 3.148340 GGGAATACCTCGCGTTGTT 57.852 52.632 5.77 0.00 35.85 2.83
2692 2712 0.725117 GGGAATACCTCGCGTTGTTG 59.275 55.000 5.77 0.00 35.85 3.33
2693 2713 1.435577 GGAATACCTCGCGTTGTTGT 58.564 50.000 5.77 0.00 0.00 3.32
2694 2714 2.609350 GGAATACCTCGCGTTGTTGTA 58.391 47.619 5.77 2.28 0.00 2.41
2695 2715 2.346545 GGAATACCTCGCGTTGTTGTAC 59.653 50.000 5.77 0.00 0.00 2.90
2696 2716 2.728690 ATACCTCGCGTTGTTGTACA 57.271 45.000 5.77 0.00 0.00 2.90
2697 2717 2.505628 TACCTCGCGTTGTTGTACAA 57.494 45.000 5.77 3.59 35.42 2.41
2698 2718 1.654317 ACCTCGCGTTGTTGTACAAA 58.346 45.000 10.51 0.00 40.15 2.83
2699 2719 2.008329 ACCTCGCGTTGTTGTACAAAA 58.992 42.857 10.51 0.99 40.15 2.44
2700 2720 2.419324 ACCTCGCGTTGTTGTACAAAAA 59.581 40.909 10.51 8.71 40.15 1.94
2701 2721 3.033185 CCTCGCGTTGTTGTACAAAAAG 58.967 45.455 11.59 10.61 40.15 2.27
2702 2722 3.486209 CCTCGCGTTGTTGTACAAAAAGT 60.486 43.478 11.59 0.00 40.15 2.66
2703 2723 4.260294 CCTCGCGTTGTTGTACAAAAAGTA 60.260 41.667 11.59 0.00 40.15 2.24
2704 2724 5.406767 TCGCGTTGTTGTACAAAAAGTAT 57.593 34.783 11.59 0.00 40.15 2.12
2705 2725 6.346758 CCTCGCGTTGTTGTACAAAAAGTATA 60.347 38.462 11.59 0.00 40.15 1.47
2706 2726 6.941802 TCGCGTTGTTGTACAAAAAGTATAA 58.058 32.000 11.59 0.00 40.15 0.98
2707 2727 7.404985 TCGCGTTGTTGTACAAAAAGTATAAA 58.595 30.769 11.59 0.00 40.15 1.40
2708 2728 7.907045 TCGCGTTGTTGTACAAAAAGTATAAAA 59.093 29.630 11.59 0.00 40.15 1.52
2709 2729 7.986680 CGCGTTGTTGTACAAAAAGTATAAAAC 59.013 33.333 11.59 0.00 40.15 2.43
2710 2730 8.796278 GCGTTGTTGTACAAAAAGTATAAAACA 58.204 29.630 11.59 0.00 40.15 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.483538 GCACCAAAAAGCAGTGTCCAAT 60.484 45.455 0.00 0.00 33.96 3.16
132 134 5.894298 ATTATCATCACACCTGGCTTCTA 57.106 39.130 0.00 0.00 0.00 2.10
181 183 6.935771 TGCATCAAATTTTCCAGCATTTAACT 59.064 30.769 0.00 0.00 0.00 2.24
224 226 8.921670 TGTCGTTTCCATTGTTGATATATATCG 58.078 33.333 16.21 2.94 35.48 2.92
288 290 4.102649 TCATAGAACACGTGTAAGCGATG 58.897 43.478 23.69 22.42 35.59 3.84
300 302 8.256611 TGAAAAAGCTACTCATCATAGAACAC 57.743 34.615 0.00 0.00 0.00 3.32
493 497 8.570096 TTTTACACTATGATGTACAGCGATAC 57.430 34.615 6.63 0.00 34.79 2.24
524 535 5.705400 CATCTAAGTGGGGTATTGGGATTT 58.295 41.667 0.00 0.00 0.00 2.17
682 693 1.064803 CCTGCGCACAAACAAACAGTA 59.935 47.619 5.66 0.00 0.00 2.74
721 732 3.508744 AAATCACCGAATGGCATTGAC 57.491 42.857 19.07 2.93 39.70 3.18
738 749 5.316167 TGTAGAGACTGGCACATTGAAAAT 58.684 37.500 0.00 0.00 38.20 1.82
790 801 7.597743 TCACCTCAACGAAAATAGTCTTAGTTC 59.402 37.037 0.00 0.00 0.00 3.01
909 923 6.661377 ACACAACAATAGGTACATAATTGGCA 59.339 34.615 14.70 0.00 35.40 4.92
935 949 2.031157 GCGGCGCCTCACATTAAATTAT 60.031 45.455 26.68 0.00 0.00 1.28
984 998 0.826715 CCATCCGTGATGTCACCTCT 59.173 55.000 7.51 0.00 43.66 3.69
989 1003 1.221566 CCAGCCATCCGTGATGTCA 59.778 57.895 11.38 0.00 38.28 3.58
1223 1237 7.701539 TCAGCAATTTACAAACCATGATAGT 57.298 32.000 0.00 0.00 0.00 2.12
1226 1240 8.851541 AAATTCAGCAATTTACAAACCATGAT 57.148 26.923 0.00 0.00 39.93 2.45
1314 1328 6.805760 GCCGCTAATAATGTAGTACCTACTTC 59.194 42.308 0.00 0.00 37.78 3.01
1658 1672 5.163131 ACAGGAACATCATCATCATCATGGA 60.163 40.000 0.00 0.00 0.00 3.41
1660 1674 6.635030 AACAGGAACATCATCATCATCATG 57.365 37.500 0.00 0.00 0.00 3.07
1697 1715 6.006449 ACTAAAACTGAGAACAGCCATCATT 58.994 36.000 0.00 0.00 46.95 2.57
2192 2212 6.429692 AGCGCATAATGCAATGGTTATACTTA 59.570 34.615 11.47 0.00 45.36 2.24
2238 2258 1.982660 TACCAACGGTTTTGGATGCA 58.017 45.000 10.02 0.00 42.06 3.96
2267 2287 9.151471 GTATCTAAATGTCCATATATGCGTTGT 57.849 33.333 7.24 0.00 0.00 3.32
2333 2353 3.916359 TGTTGAACTTCTGTGGTACCA 57.084 42.857 11.60 11.60 0.00 3.25
2334 2354 3.942748 TGTTGTTGAACTTCTGTGGTACC 59.057 43.478 4.43 4.43 32.79 3.34
2335 2355 4.634443 AGTGTTGTTGAACTTCTGTGGTAC 59.366 41.667 0.00 0.00 32.79 3.34
2336 2356 4.634004 CAGTGTTGTTGAACTTCTGTGGTA 59.366 41.667 0.00 0.00 33.84 3.25
2337 2357 3.440173 CAGTGTTGTTGAACTTCTGTGGT 59.560 43.478 0.00 0.00 33.84 4.16
2338 2358 3.440173 ACAGTGTTGTTGAACTTCTGTGG 59.560 43.478 11.67 0.00 41.58 4.17
2339 2359 4.685169 ACAGTGTTGTTGAACTTCTGTG 57.315 40.909 11.67 1.95 41.58 3.66
2340 2360 5.705609 AAACAGTGTTGTTGAACTTCTGT 57.294 34.783 9.79 3.62 46.54 3.41
2341 2361 8.020819 TCTTAAAACAGTGTTGTTGAACTTCTG 58.979 33.333 9.79 3.04 46.54 3.02
2342 2362 8.106247 TCTTAAAACAGTGTTGTTGAACTTCT 57.894 30.769 9.79 0.00 46.54 2.85
2343 2363 8.736751 TTCTTAAAACAGTGTTGTTGAACTTC 57.263 30.769 9.79 0.00 46.54 3.01
2344 2364 9.535878 TTTTCTTAAAACAGTGTTGTTGAACTT 57.464 25.926 9.79 0.62 46.54 2.66
2345 2365 9.535878 TTTTTCTTAAAACAGTGTTGTTGAACT 57.464 25.926 9.79 0.00 46.54 3.01
2369 2389 7.391148 ACTTGTAGTGTCACACTCAATTTTT 57.609 32.000 15.52 1.87 41.21 1.94
2370 2390 7.391148 AACTTGTAGTGTCACACTCAATTTT 57.609 32.000 15.52 11.13 41.21 1.82
2371 2391 7.769044 ACTAACTTGTAGTGTCACACTCAATTT 59.231 33.333 15.52 18.40 41.21 1.82
2372 2392 7.272978 ACTAACTTGTAGTGTCACACTCAATT 58.727 34.615 15.52 9.93 41.21 2.32
2373 2393 6.817184 ACTAACTTGTAGTGTCACACTCAAT 58.183 36.000 15.52 7.43 41.21 2.57
2374 2394 6.216801 ACTAACTTGTAGTGTCACACTCAA 57.783 37.500 15.52 16.42 41.21 3.02
2375 2395 5.221185 GGACTAACTTGTAGTGTCACACTCA 60.221 44.000 15.52 9.77 41.21 3.41
2376 2396 5.009811 AGGACTAACTTGTAGTGTCACACTC 59.990 44.000 15.52 7.07 41.21 3.51
2378 2398 5.197682 AGGACTAACTTGTAGTGTCACAC 57.802 43.478 0.00 0.00 34.10 3.82
2379 2399 6.016527 CAGTAGGACTAACTTGTAGTGTCACA 60.017 42.308 5.62 0.00 0.00 3.58
2380 2400 6.380190 CAGTAGGACTAACTTGTAGTGTCAC 58.620 44.000 0.00 0.00 0.00 3.67
2381 2401 5.048224 GCAGTAGGACTAACTTGTAGTGTCA 60.048 44.000 0.00 0.00 0.00 3.58
2382 2402 5.183522 AGCAGTAGGACTAACTTGTAGTGTC 59.816 44.000 0.00 0.00 0.00 3.67
2383 2403 5.078256 AGCAGTAGGACTAACTTGTAGTGT 58.922 41.667 0.00 0.00 0.00 3.55
2384 2404 5.646577 AGCAGTAGGACTAACTTGTAGTG 57.353 43.478 0.00 0.00 0.00 2.74
2385 2405 5.651576 GGTAGCAGTAGGACTAACTTGTAGT 59.348 44.000 0.00 0.00 0.00 2.73
2386 2406 5.887035 AGGTAGCAGTAGGACTAACTTGTAG 59.113 44.000 0.00 0.00 32.43 2.74
2387 2407 5.651139 CAGGTAGCAGTAGGACTAACTTGTA 59.349 44.000 0.00 0.00 34.15 2.41
2388 2408 4.463186 CAGGTAGCAGTAGGACTAACTTGT 59.537 45.833 0.00 0.00 34.15 3.16
2389 2409 4.463186 ACAGGTAGCAGTAGGACTAACTTG 59.537 45.833 0.00 0.00 34.15 3.16
2390 2410 4.463186 CACAGGTAGCAGTAGGACTAACTT 59.537 45.833 0.00 0.00 34.15 2.66
2391 2411 4.017808 CACAGGTAGCAGTAGGACTAACT 58.982 47.826 0.00 0.00 36.87 2.24
2392 2412 4.015084 TCACAGGTAGCAGTAGGACTAAC 58.985 47.826 0.00 0.00 0.00 2.34
2393 2413 4.311520 TCACAGGTAGCAGTAGGACTAA 57.688 45.455 0.00 0.00 0.00 2.24
2394 2414 4.263816 ACTTCACAGGTAGCAGTAGGACTA 60.264 45.833 0.00 0.00 0.00 2.59
2395 2415 2.901338 TCACAGGTAGCAGTAGGACT 57.099 50.000 0.00 0.00 0.00 3.85
2396 2416 2.826725 ACTTCACAGGTAGCAGTAGGAC 59.173 50.000 0.00 0.00 0.00 3.85
2397 2417 3.170991 ACTTCACAGGTAGCAGTAGGA 57.829 47.619 0.00 0.00 0.00 2.94
2398 2418 3.258372 TGAACTTCACAGGTAGCAGTAGG 59.742 47.826 0.00 0.00 0.00 3.18
2399 2419 4.521130 TGAACTTCACAGGTAGCAGTAG 57.479 45.455 0.00 0.00 0.00 2.57
2400 2420 4.799586 GCTTGAACTTCACAGGTAGCAGTA 60.800 45.833 7.30 0.00 0.00 2.74
2401 2421 3.733337 CTTGAACTTCACAGGTAGCAGT 58.267 45.455 0.00 0.00 0.00 4.40
2402 2422 2.481952 GCTTGAACTTCACAGGTAGCAG 59.518 50.000 7.30 0.00 0.00 4.24
2403 2423 2.158827 TGCTTGAACTTCACAGGTAGCA 60.159 45.455 9.94 9.94 0.00 3.49
2404 2424 2.224314 GTGCTTGAACTTCACAGGTAGC 59.776 50.000 5.72 5.72 0.00 3.58
2405 2425 3.496130 CAGTGCTTGAACTTCACAGGTAG 59.504 47.826 0.00 0.00 33.44 3.18
2406 2426 3.466836 CAGTGCTTGAACTTCACAGGTA 58.533 45.455 0.00 0.00 33.44 3.08
2407 2427 2.292267 CAGTGCTTGAACTTCACAGGT 58.708 47.619 0.00 0.00 33.44 4.00
2408 2428 1.605710 CCAGTGCTTGAACTTCACAGG 59.394 52.381 0.00 0.00 32.47 4.00
2409 2429 2.292267 ACCAGTGCTTGAACTTCACAG 58.708 47.619 0.00 0.00 33.44 3.66
2410 2430 2.418368 ACCAGTGCTTGAACTTCACA 57.582 45.000 0.00 0.00 33.44 3.58
2411 2431 2.548480 GGTACCAGTGCTTGAACTTCAC 59.452 50.000 7.15 0.00 0.00 3.18
2412 2432 2.171659 TGGTACCAGTGCTTGAACTTCA 59.828 45.455 11.60 0.00 0.00 3.02
2413 2433 2.548480 GTGGTACCAGTGCTTGAACTTC 59.452 50.000 16.93 0.00 0.00 3.01
2414 2434 2.092646 TGTGGTACCAGTGCTTGAACTT 60.093 45.455 16.93 0.00 0.00 2.66
2415 2435 1.488812 TGTGGTACCAGTGCTTGAACT 59.511 47.619 16.93 0.00 0.00 3.01
2416 2436 1.873591 CTGTGGTACCAGTGCTTGAAC 59.126 52.381 16.93 0.01 0.00 3.18
2417 2437 1.765904 TCTGTGGTACCAGTGCTTGAA 59.234 47.619 16.93 0.00 34.02 2.69
2418 2438 1.419381 TCTGTGGTACCAGTGCTTGA 58.581 50.000 16.93 4.68 34.02 3.02
2419 2439 2.146342 CTTCTGTGGTACCAGTGCTTG 58.854 52.381 16.93 0.43 34.02 4.01
2420 2440 1.768870 ACTTCTGTGGTACCAGTGCTT 59.231 47.619 16.93 0.00 34.02 3.91
2421 2441 1.424638 ACTTCTGTGGTACCAGTGCT 58.575 50.000 16.93 0.00 34.02 4.40
2422 2442 2.143925 GAACTTCTGTGGTACCAGTGC 58.856 52.381 16.93 3.91 34.02 4.40
2423 2443 3.393800 CTGAACTTCTGTGGTACCAGTG 58.606 50.000 16.93 11.30 34.02 3.66
2424 2444 2.224305 GCTGAACTTCTGTGGTACCAGT 60.224 50.000 16.93 6.35 34.02 4.00
2425 2445 2.224281 TGCTGAACTTCTGTGGTACCAG 60.224 50.000 16.93 4.58 0.00 4.00
2426 2446 1.765904 TGCTGAACTTCTGTGGTACCA 59.234 47.619 11.60 11.60 0.00 3.25
2427 2447 2.543777 TGCTGAACTTCTGTGGTACC 57.456 50.000 4.43 4.43 0.00 3.34
2428 2448 3.002348 GTGTTGCTGAACTTCTGTGGTAC 59.998 47.826 0.00 0.00 32.79 3.34
2429 2449 3.118408 AGTGTTGCTGAACTTCTGTGGTA 60.118 43.478 0.00 0.00 32.79 3.25
2430 2450 2.017049 GTGTTGCTGAACTTCTGTGGT 58.983 47.619 0.00 0.00 32.79 4.16
2431 2451 2.292267 AGTGTTGCTGAACTTCTGTGG 58.708 47.619 0.00 0.00 32.79 4.17
2463 2483 9.277783 GGCTATCTAAGAATGTCACATGTATTT 57.722 33.333 0.00 0.00 0.00 1.40
2464 2484 8.432013 TGGCTATCTAAGAATGTCACATGTATT 58.568 33.333 0.00 0.00 0.00 1.89
2465 2485 7.966812 TGGCTATCTAAGAATGTCACATGTAT 58.033 34.615 0.00 0.00 0.00 2.29
2466 2486 7.360113 TGGCTATCTAAGAATGTCACATGTA 57.640 36.000 0.00 0.00 0.00 2.29
2467 2487 6.239217 TGGCTATCTAAGAATGTCACATGT 57.761 37.500 0.00 0.00 0.00 3.21
2468 2488 7.332926 GGTATGGCTATCTAAGAATGTCACATG 59.667 40.741 0.00 0.00 0.00 3.21
2469 2489 7.390027 GGTATGGCTATCTAAGAATGTCACAT 58.610 38.462 0.00 0.00 0.00 3.21
2470 2490 6.516693 CGGTATGGCTATCTAAGAATGTCACA 60.517 42.308 0.00 0.00 0.00 3.58
2471 2491 5.864474 CGGTATGGCTATCTAAGAATGTCAC 59.136 44.000 0.00 0.00 0.00 3.67
2472 2492 5.566826 GCGGTATGGCTATCTAAGAATGTCA 60.567 44.000 0.00 0.00 0.00 3.58
2473 2493 4.865365 GCGGTATGGCTATCTAAGAATGTC 59.135 45.833 0.00 0.00 0.00 3.06
2474 2494 4.528596 AGCGGTATGGCTATCTAAGAATGT 59.471 41.667 0.00 0.00 42.62 2.71
2475 2495 5.078411 AGCGGTATGGCTATCTAAGAATG 57.922 43.478 0.00 0.00 42.62 2.67
2476 2496 6.188407 TCTAGCGGTATGGCTATCTAAGAAT 58.812 40.000 0.00 0.00 44.02 2.40
2477 2497 5.567430 TCTAGCGGTATGGCTATCTAAGAA 58.433 41.667 0.00 0.00 44.02 2.52
2478 2498 5.175388 TCTAGCGGTATGGCTATCTAAGA 57.825 43.478 0.00 0.00 44.02 2.10
2479 2499 5.358442 ACATCTAGCGGTATGGCTATCTAAG 59.642 44.000 0.00 0.00 44.02 2.18
2480 2500 5.125578 CACATCTAGCGGTATGGCTATCTAA 59.874 44.000 0.00 0.00 44.02 2.10
2481 2501 4.640647 CACATCTAGCGGTATGGCTATCTA 59.359 45.833 0.00 0.00 44.02 1.98
2482 2502 3.445450 CACATCTAGCGGTATGGCTATCT 59.555 47.826 0.00 0.00 44.02 1.98
2483 2503 3.444034 TCACATCTAGCGGTATGGCTATC 59.556 47.826 0.00 0.00 44.02 2.08
2484 2504 3.431415 TCACATCTAGCGGTATGGCTAT 58.569 45.455 0.00 0.00 44.02 2.97
2485 2505 2.871453 TCACATCTAGCGGTATGGCTA 58.129 47.619 0.00 0.00 44.29 3.93
2486 2506 1.704641 TCACATCTAGCGGTATGGCT 58.295 50.000 0.00 0.00 46.88 4.75
2487 2507 2.224066 ACTTCACATCTAGCGGTATGGC 60.224 50.000 0.00 0.00 0.00 4.40
2488 2508 3.735237 ACTTCACATCTAGCGGTATGG 57.265 47.619 0.00 0.00 0.00 2.74
2489 2509 4.682787 TGAACTTCACATCTAGCGGTATG 58.317 43.478 0.00 0.00 0.00 2.39
2490 2510 5.105310 ACTTGAACTTCACATCTAGCGGTAT 60.105 40.000 0.00 0.00 0.00 2.73
2491 2511 4.219944 ACTTGAACTTCACATCTAGCGGTA 59.780 41.667 0.00 0.00 0.00 4.02
2492 2512 3.006967 ACTTGAACTTCACATCTAGCGGT 59.993 43.478 0.00 0.00 0.00 5.68
2493 2513 3.589988 ACTTGAACTTCACATCTAGCGG 58.410 45.455 0.00 0.00 0.00 5.52
2494 2514 5.403246 AGTACTTGAACTTCACATCTAGCG 58.597 41.667 0.00 0.00 0.00 4.26
2495 2515 6.647067 ACAAGTACTTGAACTTCACATCTAGC 59.353 38.462 36.14 0.00 42.93 3.42
2496 2516 9.130312 GTACAAGTACTTGAACTTCACATCTAG 57.870 37.037 36.14 9.36 42.93 2.43
2497 2517 8.635328 TGTACAAGTACTTGAACTTCACATCTA 58.365 33.333 36.14 14.53 42.93 1.98
2498 2518 7.497595 TGTACAAGTACTTGAACTTCACATCT 58.502 34.615 36.14 15.45 42.93 2.90
2499 2519 7.709269 TGTACAAGTACTTGAACTTCACATC 57.291 36.000 36.14 15.62 42.93 3.06
2500 2520 7.551262 TGTTGTACAAGTACTTGAACTTCACAT 59.449 33.333 36.14 16.57 42.93 3.21
2501 2521 6.874664 TGTTGTACAAGTACTTGAACTTCACA 59.125 34.615 36.14 25.38 42.93 3.58
2502 2522 7.298507 TGTTGTACAAGTACTTGAACTTCAC 57.701 36.000 36.14 23.63 42.93 3.18
2503 2523 9.602568 TTATGTTGTACAAGTACTTGAACTTCA 57.397 29.630 36.14 26.59 42.93 3.02
2505 2525 9.609346 ACTTATGTTGTACAAGTACTTGAACTT 57.391 29.630 36.14 27.01 42.93 2.66
2506 2526 9.609346 AACTTATGTTGTACAAGTACTTGAACT 57.391 29.630 36.14 19.86 38.22 3.01
2507 2527 9.859692 GAACTTATGTTGTACAAGTACTTGAAC 57.140 33.333 36.14 28.45 38.44 3.18
2508 2528 9.602568 TGAACTTATGTTGTACAAGTACTTGAA 57.397 29.630 36.14 20.42 38.44 2.69
2509 2529 9.037737 GTGAACTTATGTTGTACAAGTACTTGA 57.962 33.333 36.14 19.80 38.44 3.02
2510 2530 8.822855 TGTGAACTTATGTTGTACAAGTACTTG 58.177 33.333 29.76 29.76 40.29 3.16
2511 2531 8.951787 TGTGAACTTATGTTGTACAAGTACTT 57.048 30.769 8.98 1.12 36.39 2.24
2512 2532 8.951787 TTGTGAACTTATGTTGTACAAGTACT 57.048 30.769 8.98 0.00 36.16 2.73
2513 2533 9.807386 GATTGTGAACTTATGTTGTACAAGTAC 57.193 33.333 8.98 0.00 40.19 2.73
2514 2534 9.549078 TGATTGTGAACTTATGTTGTACAAGTA 57.451 29.630 8.98 1.46 40.19 2.24
2515 2535 8.445275 TGATTGTGAACTTATGTTGTACAAGT 57.555 30.769 8.98 0.00 40.19 3.16
2516 2536 9.897744 ATTGATTGTGAACTTATGTTGTACAAG 57.102 29.630 8.98 0.00 40.19 3.16
2517 2537 9.676195 CATTGATTGTGAACTTATGTTGTACAA 57.324 29.630 3.59 3.59 40.64 2.41
2518 2538 7.807433 GCATTGATTGTGAACTTATGTTGTACA 59.193 33.333 0.00 0.00 36.39 2.90
2519 2539 7.807433 TGCATTGATTGTGAACTTATGTTGTAC 59.193 33.333 0.00 0.00 36.39 2.90
2520 2540 7.880105 TGCATTGATTGTGAACTTATGTTGTA 58.120 30.769 0.00 0.00 36.39 2.41
2521 2541 6.747125 TGCATTGATTGTGAACTTATGTTGT 58.253 32.000 0.00 0.00 36.39 3.32
2522 2542 7.640616 TTGCATTGATTGTGAACTTATGTTG 57.359 32.000 0.00 0.00 36.39 3.33
2523 2543 8.659925 TTTTGCATTGATTGTGAACTTATGTT 57.340 26.923 0.00 0.00 39.42 2.71
2524 2544 8.659925 TTTTTGCATTGATTGTGAACTTATGT 57.340 26.923 0.00 0.00 0.00 2.29
2568 2588 4.321899 GGCACTGGTCTGCATGAATAAAAA 60.322 41.667 0.00 0.00 39.08 1.94
2569 2589 3.193267 GGCACTGGTCTGCATGAATAAAA 59.807 43.478 0.00 0.00 39.08 1.52
2570 2590 2.754552 GGCACTGGTCTGCATGAATAAA 59.245 45.455 0.00 0.00 39.08 1.40
2571 2591 2.368439 GGCACTGGTCTGCATGAATAA 58.632 47.619 0.00 0.00 39.08 1.40
2572 2592 1.408683 GGGCACTGGTCTGCATGAATA 60.409 52.381 0.00 0.00 39.08 1.75
2573 2593 0.682209 GGGCACTGGTCTGCATGAAT 60.682 55.000 0.00 0.00 39.08 2.57
2574 2594 1.303561 GGGCACTGGTCTGCATGAA 60.304 57.895 0.00 0.00 39.08 2.57
2575 2595 1.855441 ATGGGCACTGGTCTGCATGA 61.855 55.000 0.00 0.00 39.08 3.07
2576 2596 1.379443 ATGGGCACTGGTCTGCATG 60.379 57.895 0.00 0.00 39.08 4.06
2577 2597 1.077212 GATGGGCACTGGTCTGCAT 60.077 57.895 0.00 0.00 39.08 3.96
2578 2598 2.352422 GATGGGCACTGGTCTGCA 59.648 61.111 0.00 0.00 39.08 4.41
2579 2599 2.599645 ATCGATGGGCACTGGTCTGC 62.600 60.000 0.00 0.00 36.33 4.26
2580 2600 0.812811 CATCGATGGGCACTGGTCTG 60.813 60.000 17.96 0.00 0.00 3.51
2581 2601 1.524002 CATCGATGGGCACTGGTCT 59.476 57.895 17.96 0.00 0.00 3.85
2582 2602 1.524621 CCATCGATGGGCACTGGTC 60.525 63.158 32.99 0.00 44.31 4.02
2583 2603 2.591753 CCATCGATGGGCACTGGT 59.408 61.111 32.99 0.00 44.31 4.00
2592 2612 2.668457 GGTATAGCTTTCGCCATCGATG 59.332 50.000 18.76 18.76 45.04 3.84
2593 2613 2.299013 TGGTATAGCTTTCGCCATCGAT 59.701 45.455 3.20 0.00 45.04 3.59
2594 2614 1.684450 TGGTATAGCTTTCGCCATCGA 59.316 47.619 3.20 0.00 43.89 3.59
2595 2615 2.148916 TGGTATAGCTTTCGCCATCG 57.851 50.000 3.20 0.00 36.60 3.84
2596 2616 5.874810 TGATTATGGTATAGCTTTCGCCATC 59.125 40.000 13.62 5.27 40.13 3.51
2597 2617 5.804639 TGATTATGGTATAGCTTTCGCCAT 58.195 37.500 14.33 14.33 42.05 4.40
2598 2618 5.222079 TGATTATGGTATAGCTTTCGCCA 57.778 39.130 3.20 0.00 36.60 5.69
2599 2619 6.743575 AATGATTATGGTATAGCTTTCGCC 57.256 37.500 3.20 0.00 36.60 5.54
2600 2620 7.094805 TGGAAATGATTATGGTATAGCTTTCGC 60.095 37.037 3.20 0.00 0.00 4.70
2601 2621 8.322906 TGGAAATGATTATGGTATAGCTTTCG 57.677 34.615 3.20 0.00 0.00 3.46
2604 2624 9.420118 TGTTTGGAAATGATTATGGTATAGCTT 57.580 29.630 3.20 0.00 0.00 3.74
2605 2625 8.850156 GTGTTTGGAAATGATTATGGTATAGCT 58.150 33.333 3.20 0.00 0.00 3.32
2606 2626 8.082242 GGTGTTTGGAAATGATTATGGTATAGC 58.918 37.037 0.00 0.00 0.00 2.97
2607 2627 8.289618 CGGTGTTTGGAAATGATTATGGTATAG 58.710 37.037 0.00 0.00 0.00 1.31
2608 2628 7.776030 ACGGTGTTTGGAAATGATTATGGTATA 59.224 33.333 0.00 0.00 0.00 1.47
2609 2629 6.605594 ACGGTGTTTGGAAATGATTATGGTAT 59.394 34.615 0.00 0.00 0.00 2.73
2610 2630 5.946972 ACGGTGTTTGGAAATGATTATGGTA 59.053 36.000 0.00 0.00 0.00 3.25
2611 2631 4.770010 ACGGTGTTTGGAAATGATTATGGT 59.230 37.500 0.00 0.00 0.00 3.55
2612 2632 5.323371 ACGGTGTTTGGAAATGATTATGG 57.677 39.130 0.00 0.00 0.00 2.74
2613 2633 5.105957 TGGACGGTGTTTGGAAATGATTATG 60.106 40.000 0.00 0.00 0.00 1.90
2614 2634 5.013547 TGGACGGTGTTTGGAAATGATTAT 58.986 37.500 0.00 0.00 0.00 1.28
2615 2635 4.216687 GTGGACGGTGTTTGGAAATGATTA 59.783 41.667 0.00 0.00 0.00 1.75
2616 2636 3.005367 GTGGACGGTGTTTGGAAATGATT 59.995 43.478 0.00 0.00 0.00 2.57
2617 2637 2.556622 GTGGACGGTGTTTGGAAATGAT 59.443 45.455 0.00 0.00 0.00 2.45
2618 2638 1.950909 GTGGACGGTGTTTGGAAATGA 59.049 47.619 0.00 0.00 0.00 2.57
2619 2639 1.678627 TGTGGACGGTGTTTGGAAATG 59.321 47.619 0.00 0.00 0.00 2.32
2620 2640 2.060050 TGTGGACGGTGTTTGGAAAT 57.940 45.000 0.00 0.00 0.00 2.17
2621 2641 1.746220 CTTGTGGACGGTGTTTGGAAA 59.254 47.619 0.00 0.00 0.00 3.13
2622 2642 1.065345 TCTTGTGGACGGTGTTTGGAA 60.065 47.619 0.00 0.00 0.00 3.53
2623 2643 0.542333 TCTTGTGGACGGTGTTTGGA 59.458 50.000 0.00 0.00 0.00 3.53
2624 2644 1.604604 ATCTTGTGGACGGTGTTTGG 58.395 50.000 0.00 0.00 0.00 3.28
2625 2645 3.426159 GCATATCTTGTGGACGGTGTTTG 60.426 47.826 0.00 0.00 0.00 2.93
2626 2646 2.747446 GCATATCTTGTGGACGGTGTTT 59.253 45.455 0.00 0.00 0.00 2.83
2627 2647 2.356135 GCATATCTTGTGGACGGTGTT 58.644 47.619 0.00 0.00 0.00 3.32
2628 2648 1.406887 GGCATATCTTGTGGACGGTGT 60.407 52.381 0.00 0.00 0.00 4.16
2629 2649 1.299541 GGCATATCTTGTGGACGGTG 58.700 55.000 0.00 0.00 0.00 4.94
2630 2650 0.179084 CGGCATATCTTGTGGACGGT 60.179 55.000 0.00 0.00 0.00 4.83
2631 2651 0.179084 ACGGCATATCTTGTGGACGG 60.179 55.000 0.00 0.00 0.00 4.79
2632 2652 1.327460 CAACGGCATATCTTGTGGACG 59.673 52.381 0.00 0.00 0.00 4.79
2633 2653 1.670811 CCAACGGCATATCTTGTGGAC 59.329 52.381 0.00 0.00 0.00 4.02
2634 2654 2.036958 CCAACGGCATATCTTGTGGA 57.963 50.000 0.00 0.00 0.00 4.02
2647 2667 1.452110 TCTTCATGATGTGCCAACGG 58.548 50.000 8.33 0.00 0.00 4.44
2648 2668 2.485426 ACTTCTTCATGATGTGCCAACG 59.515 45.455 8.33 0.00 32.69 4.10
2649 2669 4.455533 TGTACTTCTTCATGATGTGCCAAC 59.544 41.667 8.33 3.69 35.60 3.77
2650 2670 4.650734 TGTACTTCTTCATGATGTGCCAA 58.349 39.130 8.33 0.00 35.60 4.52
2651 2671 4.256110 CTGTACTTCTTCATGATGTGCCA 58.744 43.478 8.33 3.98 35.60 4.92
2652 2672 3.624861 CCTGTACTTCTTCATGATGTGCC 59.375 47.826 8.33 0.41 35.60 5.01
2653 2673 3.624861 CCCTGTACTTCTTCATGATGTGC 59.375 47.826 8.33 4.66 36.49 4.57
2654 2674 5.089970 TCCCTGTACTTCTTCATGATGTG 57.910 43.478 8.33 5.86 35.19 3.21
2655 2675 5.762179 TTCCCTGTACTTCTTCATGATGT 57.238 39.130 8.33 3.13 37.00 3.06
2656 2676 6.708054 GGTATTCCCTGTACTTCTTCATGATG 59.292 42.308 0.00 0.00 0.00 3.07
2657 2677 6.617371 AGGTATTCCCTGTACTTCTTCATGAT 59.383 38.462 0.00 0.00 44.08 2.45
2658 2678 5.964477 AGGTATTCCCTGTACTTCTTCATGA 59.036 40.000 0.00 0.00 44.08 3.07
2659 2679 6.240549 AGGTATTCCCTGTACTTCTTCATG 57.759 41.667 0.00 0.00 44.08 3.07
2660 2680 5.069251 CGAGGTATTCCCTGTACTTCTTCAT 59.931 44.000 0.00 0.00 46.51 2.57
2661 2681 4.401519 CGAGGTATTCCCTGTACTTCTTCA 59.598 45.833 0.00 0.00 46.51 3.02
2662 2682 4.737055 GCGAGGTATTCCCTGTACTTCTTC 60.737 50.000 0.00 0.00 46.51 2.87
2663 2683 3.132467 GCGAGGTATTCCCTGTACTTCTT 59.868 47.826 0.00 0.00 46.51 2.52
2664 2684 2.694109 GCGAGGTATTCCCTGTACTTCT 59.306 50.000 0.00 0.00 46.51 2.85
2665 2685 2.543238 CGCGAGGTATTCCCTGTACTTC 60.543 54.545 0.00 0.00 46.51 3.01
2666 2686 1.407979 CGCGAGGTATTCCCTGTACTT 59.592 52.381 0.00 0.00 46.51 2.24
2667 2687 1.030457 CGCGAGGTATTCCCTGTACT 58.970 55.000 0.00 0.00 46.51 2.73
2668 2688 0.743097 ACGCGAGGTATTCCCTGTAC 59.257 55.000 15.93 0.00 46.51 2.90
2669 2689 1.135527 CAACGCGAGGTATTCCCTGTA 59.864 52.381 15.93 0.00 46.51 2.74
2670 2690 0.108329 CAACGCGAGGTATTCCCTGT 60.108 55.000 15.93 0.00 46.51 4.00
2671 2691 0.108329 ACAACGCGAGGTATTCCCTG 60.108 55.000 15.93 0.00 46.51 4.45
2673 2693 0.725117 CAACAACGCGAGGTATTCCC 59.275 55.000 15.93 0.00 0.00 3.97
2674 2694 1.435577 ACAACAACGCGAGGTATTCC 58.564 50.000 15.93 0.00 0.00 3.01
2675 2695 2.988493 TGTACAACAACGCGAGGTATTC 59.012 45.455 15.93 1.41 0.00 1.75
2676 2696 3.029320 TGTACAACAACGCGAGGTATT 57.971 42.857 15.93 3.38 0.00 1.89
2677 2697 2.728690 TGTACAACAACGCGAGGTAT 57.271 45.000 15.93 5.04 0.00 2.73
2678 2698 2.505628 TTGTACAACAACGCGAGGTA 57.494 45.000 15.93 4.52 32.34 3.08
2679 2699 1.654317 TTTGTACAACAACGCGAGGT 58.346 45.000 15.93 7.47 37.90 3.85
2680 2700 2.741122 TTTTGTACAACAACGCGAGG 57.259 45.000 15.93 6.68 37.90 4.63
2681 2701 3.676540 ACTTTTTGTACAACAACGCGAG 58.323 40.909 15.93 7.57 37.90 5.03
2682 2702 3.743567 ACTTTTTGTACAACAACGCGA 57.256 38.095 15.93 0.00 37.90 5.87
2683 2703 7.592012 TTTATACTTTTTGTACAACAACGCG 57.408 32.000 8.07 3.53 37.90 6.01
2684 2704 8.796278 TGTTTTATACTTTTTGTACAACAACGC 58.204 29.630 8.07 0.00 37.90 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.