Multiple sequence alignment - TraesCS7A01G279300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G279300 chr7A 100.000 3413 0 0 592 4004 297941565 297944977 0.000000e+00 6303.0
1 TraesCS7A01G279300 chr7A 100.000 262 0 0 1 262 297940974 297941235 6.020000e-133 484.0
2 TraesCS7A01G279300 chr7D 94.610 1874 60 11 732 2564 269718735 269716862 0.000000e+00 2863.0
3 TraesCS7A01G279300 chr7D 90.223 1432 62 23 2552 3930 269710080 269708674 0.000000e+00 1797.0
4 TraesCS7A01G279300 chr7B 94.143 1844 73 11 747 2564 271317495 271315661 0.000000e+00 2774.0
5 TraesCS7A01G279300 chr7B 97.111 623 14 3 2552 3172 271298708 271298088 0.000000e+00 1048.0
6 TraesCS7A01G279300 chr7B 86.396 838 63 17 3212 4002 271297827 271296994 0.000000e+00 869.0
7 TraesCS7A01G279300 chr7B 87.600 250 24 3 18 262 271334644 271334397 2.360000e-72 283.0
8 TraesCS7A01G279300 chr5D 90.283 247 24 0 2041 2287 542699287 542699533 1.390000e-84 324.0
9 TraesCS7A01G279300 chr5D 88.800 250 21 6 2041 2288 267821553 267821797 2.340000e-77 300.0
10 TraesCS7A01G279300 chr3B 89.837 246 25 0 2041 2286 559885508 559885263 2.320000e-82 316.0
11 TraesCS7A01G279300 chr3B 76.744 172 33 5 3816 3982 323324792 323324623 5.510000e-14 89.8
12 TraesCS7A01G279300 chr5B 89.600 250 18 7 2041 2288 302843278 302843521 1.080000e-80 311.0
13 TraesCS7A01G279300 chr5B 86.640 247 32 1 2041 2286 661206911 661207157 5.100000e-69 272.0
14 TraesCS7A01G279300 chr4B 88.211 246 29 0 2041 2286 672235 672480 1.090000e-75 294.0
15 TraesCS7A01G279300 chr3A 87.398 246 31 0 2041 2286 8176571 8176816 2.360000e-72 283.0
16 TraesCS7A01G279300 chr2D 80.982 163 28 3 3829 3989 282146509 282146348 4.200000e-25 126.0
17 TraesCS7A01G279300 chr2D 80.368 163 25 4 3829 3989 283291151 283290994 2.530000e-22 117.0
18 TraesCS7A01G279300 chr3D 75.145 173 35 7 3816 3982 260336590 260336420 1.540000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G279300 chr7A 297940974 297944977 4003 False 3393.5 6303 100.0000 1 4004 2 chr7A.!!$F1 4003
1 TraesCS7A01G279300 chr7D 269716862 269718735 1873 True 2863.0 2863 94.6100 732 2564 1 chr7D.!!$R2 1832
2 TraesCS7A01G279300 chr7D 269708674 269710080 1406 True 1797.0 1797 90.2230 2552 3930 1 chr7D.!!$R1 1378
3 TraesCS7A01G279300 chr7B 271315661 271317495 1834 True 2774.0 2774 94.1430 747 2564 1 chr7B.!!$R1 1817
4 TraesCS7A01G279300 chr7B 271296994 271298708 1714 True 958.5 1048 91.7535 2552 4002 2 chr7B.!!$R3 1450

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 665 0.036164 AAACTACATCGCCTGTGCCA 59.964 50.0 1.25 0.0 38.92 4.92 F
800 810 0.529992 GAAGACTCGTATTGGGCCGG 60.530 60.0 0.00 0.0 0.00 6.13 F
842 852 1.050009 GCAACGAACGCCTTTTTAGC 58.950 50.0 0.00 0.0 0.00 3.09 F
1272 1303 1.209128 CGCATCATCAAGGTCCGTAC 58.791 55.0 0.00 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2163 2213 1.002576 CATGACAACTTGCGTGCTTCA 60.003 47.619 0.0 0.0 0.00 3.02 R
2556 2606 1.133025 GCTCAACATGGACAATTCCCG 59.867 52.381 0.0 0.0 42.01 5.14 R
2748 2799 2.338015 GCTGCCTGGTGTGGTCATG 61.338 63.158 0.0 0.0 0.00 3.07 R
3235 3508 0.320771 CAGTGTCGGCTTAACCTGCT 60.321 55.000 0.0 0.0 35.61 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.850122 ATCACGAAGAGATGACGTTGA 57.150 42.857 0.00 0.00 36.27 3.18
31 32 3.636282 TCACGAAGAGATGACGTTGAA 57.364 42.857 0.00 0.00 38.18 2.69
32 33 4.174411 TCACGAAGAGATGACGTTGAAT 57.826 40.909 0.00 0.00 38.18 2.57
33 34 4.556233 TCACGAAGAGATGACGTTGAATT 58.444 39.130 0.00 0.00 38.18 2.17
34 35 5.705902 TCACGAAGAGATGACGTTGAATTA 58.294 37.500 0.00 0.00 38.18 1.40
35 36 6.330278 TCACGAAGAGATGACGTTGAATTAT 58.670 36.000 0.00 0.00 38.18 1.28
36 37 7.477494 TCACGAAGAGATGACGTTGAATTATA 58.523 34.615 0.00 0.00 38.18 0.98
37 38 7.644157 TCACGAAGAGATGACGTTGAATTATAG 59.356 37.037 0.00 0.00 38.18 1.31
38 39 6.918569 ACGAAGAGATGACGTTGAATTATAGG 59.081 38.462 0.00 0.00 36.91 2.57
39 40 6.363626 CGAAGAGATGACGTTGAATTATAGGG 59.636 42.308 0.00 0.00 0.00 3.53
40 41 6.978674 AGAGATGACGTTGAATTATAGGGA 57.021 37.500 0.00 0.00 0.00 4.20
41 42 7.361457 AGAGATGACGTTGAATTATAGGGAA 57.639 36.000 0.00 0.00 0.00 3.97
42 43 7.792032 AGAGATGACGTTGAATTATAGGGAAA 58.208 34.615 0.00 0.00 0.00 3.13
43 44 8.265055 AGAGATGACGTTGAATTATAGGGAAAA 58.735 33.333 0.00 0.00 0.00 2.29
44 45 8.980481 AGATGACGTTGAATTATAGGGAAAAT 57.020 30.769 0.00 0.00 0.00 1.82
48 49 9.893634 TGACGTTGAATTATAGGGAAAATAAGA 57.106 29.630 0.00 0.00 0.00 2.10
56 57 8.813643 ATTATAGGGAAAATAAGAGACGAACG 57.186 34.615 0.00 0.00 0.00 3.95
57 58 4.532314 AGGGAAAATAAGAGACGAACGT 57.468 40.909 0.00 0.00 0.00 3.99
58 59 4.492611 AGGGAAAATAAGAGACGAACGTC 58.507 43.478 17.79 17.79 44.86 4.34
59 60 3.615937 GGGAAAATAAGAGACGAACGTCC 59.384 47.826 20.97 13.61 45.59 4.79
60 61 3.615937 GGAAAATAAGAGACGAACGTCCC 59.384 47.826 20.97 11.70 45.59 4.46
61 62 3.947910 AAATAAGAGACGAACGTCCCA 57.052 42.857 20.97 6.92 45.59 4.37
62 63 3.947910 AATAAGAGACGAACGTCCCAA 57.052 42.857 20.97 7.52 45.59 4.12
63 64 4.467198 AATAAGAGACGAACGTCCCAAT 57.533 40.909 20.97 9.21 45.59 3.16
64 65 5.587388 AATAAGAGACGAACGTCCCAATA 57.413 39.130 20.97 11.35 45.59 1.90
65 66 3.947910 AAGAGACGAACGTCCCAATAA 57.052 42.857 20.97 0.00 45.59 1.40
66 67 3.505464 AGAGACGAACGTCCCAATAAG 57.495 47.619 20.97 0.00 45.59 1.73
67 68 2.824341 AGAGACGAACGTCCCAATAAGT 59.176 45.455 20.97 2.91 45.59 2.24
68 69 2.921754 GAGACGAACGTCCCAATAAGTG 59.078 50.000 20.97 0.00 45.59 3.16
69 70 2.298163 AGACGAACGTCCCAATAAGTGT 59.702 45.455 20.97 0.00 45.59 3.55
70 71 3.507233 AGACGAACGTCCCAATAAGTGTA 59.493 43.478 20.97 0.00 45.59 2.90
71 72 4.159135 AGACGAACGTCCCAATAAGTGTAT 59.841 41.667 20.97 0.00 45.59 2.29
72 73 4.178540 ACGAACGTCCCAATAAGTGTATG 58.821 43.478 0.00 0.00 0.00 2.39
73 74 4.178540 CGAACGTCCCAATAAGTGTATGT 58.821 43.478 0.00 0.00 0.00 2.29
74 75 4.628333 CGAACGTCCCAATAAGTGTATGTT 59.372 41.667 0.00 0.00 0.00 2.71
75 76 5.121142 CGAACGTCCCAATAAGTGTATGTTT 59.879 40.000 0.00 0.00 0.00 2.83
76 77 6.347888 CGAACGTCCCAATAAGTGTATGTTTT 60.348 38.462 0.00 0.00 0.00 2.43
77 78 7.148606 CGAACGTCCCAATAAGTGTATGTTTTA 60.149 37.037 0.00 0.00 0.00 1.52
78 79 7.605410 ACGTCCCAATAAGTGTATGTTTTAG 57.395 36.000 0.00 0.00 0.00 1.85
79 80 6.093082 ACGTCCCAATAAGTGTATGTTTTAGC 59.907 38.462 0.00 0.00 0.00 3.09
80 81 6.315393 CGTCCCAATAAGTGTATGTTTTAGCT 59.685 38.462 0.00 0.00 0.00 3.32
81 82 7.148306 CGTCCCAATAAGTGTATGTTTTAGCTT 60.148 37.037 0.00 0.00 0.00 3.74
82 83 9.169592 GTCCCAATAAGTGTATGTTTTAGCTTA 57.830 33.333 0.00 0.00 0.00 3.09
83 84 9.914834 TCCCAATAAGTGTATGTTTTAGCTTAT 57.085 29.630 0.00 0.00 32.54 1.73
85 86 9.864034 CCAATAAGTGTATGTTTTAGCTTATCG 57.136 33.333 0.00 0.00 31.31 2.92
86 87 9.370126 CAATAAGTGTATGTTTTAGCTTATCGC 57.630 33.333 0.00 0.00 39.57 4.58
87 88 6.978343 AAGTGTATGTTTTAGCTTATCGCA 57.022 33.333 0.00 0.00 42.61 5.10
88 89 6.345920 AGTGTATGTTTTAGCTTATCGCAC 57.654 37.500 0.00 0.00 42.61 5.34
89 90 5.005394 AGTGTATGTTTTAGCTTATCGCACG 59.995 40.000 0.00 0.00 42.61 5.34
90 91 5.005012 GTGTATGTTTTAGCTTATCGCACGA 59.995 40.000 0.00 0.00 42.61 4.35
91 92 4.778842 ATGTTTTAGCTTATCGCACGAG 57.221 40.909 0.00 0.00 42.61 4.18
92 93 3.581755 TGTTTTAGCTTATCGCACGAGT 58.418 40.909 0.00 0.00 42.61 4.18
93 94 3.991773 TGTTTTAGCTTATCGCACGAGTT 59.008 39.130 0.00 0.00 42.61 3.01
94 95 4.143200 TGTTTTAGCTTATCGCACGAGTTG 60.143 41.667 0.00 0.00 42.61 3.16
95 96 2.933495 TAGCTTATCGCACGAGTTGT 57.067 45.000 0.00 0.00 42.61 3.32
96 97 2.080286 AGCTTATCGCACGAGTTGTT 57.920 45.000 0.00 0.00 42.61 2.83
97 98 1.726791 AGCTTATCGCACGAGTTGTTG 59.273 47.619 0.00 0.00 42.61 3.33
98 99 1.786928 GCTTATCGCACGAGTTGTTGC 60.787 52.381 0.00 0.00 38.92 4.17
99 100 0.793861 TTATCGCACGAGTTGTTGCC 59.206 50.000 0.00 0.00 0.00 4.52
100 101 1.348538 TATCGCACGAGTTGTTGCCG 61.349 55.000 0.00 0.00 0.00 5.69
101 102 3.334751 CGCACGAGTTGTTGCCGA 61.335 61.111 0.00 0.00 0.00 5.54
102 103 2.551270 GCACGAGTTGTTGCCGAG 59.449 61.111 0.00 0.00 0.00 4.63
103 104 2.954753 GCACGAGTTGTTGCCGAGG 61.955 63.158 0.00 0.00 0.00 4.63
104 105 2.030562 ACGAGTTGTTGCCGAGGG 59.969 61.111 0.00 0.00 0.00 4.30
105 106 2.030562 CGAGTTGTTGCCGAGGGT 59.969 61.111 0.00 0.00 0.00 4.34
106 107 1.597027 CGAGTTGTTGCCGAGGGTT 60.597 57.895 0.00 0.00 0.00 4.11
107 108 1.164041 CGAGTTGTTGCCGAGGGTTT 61.164 55.000 0.00 0.00 0.00 3.27
108 109 1.029681 GAGTTGTTGCCGAGGGTTTT 58.970 50.000 0.00 0.00 0.00 2.43
109 110 1.001706 GAGTTGTTGCCGAGGGTTTTC 60.002 52.381 0.00 0.00 0.00 2.29
110 111 0.741915 GTTGTTGCCGAGGGTTTTCA 59.258 50.000 0.00 0.00 0.00 2.69
111 112 0.741915 TTGTTGCCGAGGGTTTTCAC 59.258 50.000 0.00 0.00 0.00 3.18
112 113 1.104577 TGTTGCCGAGGGTTTTCACC 61.105 55.000 0.00 0.00 43.37 4.02
113 114 0.822121 GTTGCCGAGGGTTTTCACCT 60.822 55.000 0.00 0.00 43.65 4.00
114 115 0.766131 TTGCCGAGGGTTTTCACCTA 59.234 50.000 0.00 0.00 43.65 3.08
115 116 0.323629 TGCCGAGGGTTTTCACCTAG 59.676 55.000 0.00 0.00 43.65 3.02
116 117 0.611714 GCCGAGGGTTTTCACCTAGA 59.388 55.000 0.00 0.00 43.65 2.43
117 118 1.405661 GCCGAGGGTTTTCACCTAGAG 60.406 57.143 0.00 0.00 43.65 2.43
118 119 2.176889 CCGAGGGTTTTCACCTAGAGA 58.823 52.381 0.00 0.00 43.65 3.10
119 120 2.166664 CCGAGGGTTTTCACCTAGAGAG 59.833 54.545 0.00 0.00 43.65 3.20
120 121 2.417515 CGAGGGTTTTCACCTAGAGAGC 60.418 54.545 0.00 0.00 43.65 4.09
121 122 2.835156 GAGGGTTTTCACCTAGAGAGCT 59.165 50.000 0.00 0.00 43.65 4.09
122 123 3.252351 AGGGTTTTCACCTAGAGAGCTT 58.748 45.455 0.00 0.00 43.65 3.74
123 124 3.653352 AGGGTTTTCACCTAGAGAGCTTT 59.347 43.478 0.00 0.00 43.65 3.51
124 125 4.844655 AGGGTTTTCACCTAGAGAGCTTTA 59.155 41.667 0.00 0.00 43.65 1.85
125 126 4.936411 GGGTTTTCACCTAGAGAGCTTTAC 59.064 45.833 0.00 0.00 43.65 2.01
126 127 5.512576 GGGTTTTCACCTAGAGAGCTTTACA 60.513 44.000 0.00 0.00 43.65 2.41
127 128 6.174049 GGTTTTCACCTAGAGAGCTTTACAT 58.826 40.000 0.00 0.00 40.44 2.29
128 129 7.328737 GGTTTTCACCTAGAGAGCTTTACATA 58.671 38.462 0.00 0.00 40.44 2.29
129 130 7.988028 GGTTTTCACCTAGAGAGCTTTACATAT 59.012 37.037 0.00 0.00 40.44 1.78
130 131 8.821894 GTTTTCACCTAGAGAGCTTTACATATG 58.178 37.037 0.00 0.00 0.00 1.78
131 132 7.661536 TTCACCTAGAGAGCTTTACATATGT 57.338 36.000 13.93 13.93 0.00 2.29
132 133 7.043961 TCACCTAGAGAGCTTTACATATGTG 57.956 40.000 18.81 2.92 0.00 3.21
133 134 6.833933 TCACCTAGAGAGCTTTACATATGTGA 59.166 38.462 18.81 7.50 0.00 3.58
134 135 7.342026 TCACCTAGAGAGCTTTACATATGTGAA 59.658 37.037 18.81 15.17 0.00 3.18
135 136 7.651304 CACCTAGAGAGCTTTACATATGTGAAG 59.349 40.741 27.56 27.56 42.43 3.02
152 153 5.344207 GTGAAGCTTCACGATACAAAAGT 57.656 39.130 36.44 0.00 46.80 2.66
153 154 5.374898 GTGAAGCTTCACGATACAAAAGTC 58.625 41.667 36.44 14.93 46.80 3.01
154 155 4.149922 TGAAGCTTCACGATACAAAAGTCG 59.850 41.667 25.16 0.00 43.13 4.18
155 156 3.909430 AGCTTCACGATACAAAAGTCGA 58.091 40.909 1.49 0.00 40.11 4.20
156 157 4.495422 AGCTTCACGATACAAAAGTCGAT 58.505 39.130 1.49 0.00 40.11 3.59
157 158 4.563184 AGCTTCACGATACAAAAGTCGATC 59.437 41.667 1.49 0.00 40.11 3.69
158 159 4.326278 GCTTCACGATACAAAAGTCGATCA 59.674 41.667 1.49 0.00 40.11 2.92
159 160 5.163992 GCTTCACGATACAAAAGTCGATCAA 60.164 40.000 1.49 0.00 40.11 2.57
160 161 6.389622 TTCACGATACAAAAGTCGATCAAG 57.610 37.500 1.49 0.00 40.11 3.02
161 162 4.326278 TCACGATACAAAAGTCGATCAAGC 59.674 41.667 1.49 0.00 40.11 4.01
162 163 4.327357 CACGATACAAAAGTCGATCAAGCT 59.673 41.667 1.49 0.00 40.11 3.74
163 164 5.515270 CACGATACAAAAGTCGATCAAGCTA 59.485 40.000 1.49 0.00 40.11 3.32
164 165 5.744345 ACGATACAAAAGTCGATCAAGCTAG 59.256 40.000 1.49 0.00 40.11 3.42
165 166 5.331905 CGATACAAAAGTCGATCAAGCTAGC 60.332 44.000 6.62 6.62 40.11 3.42
166 167 3.931578 ACAAAAGTCGATCAAGCTAGCT 58.068 40.909 12.68 12.68 0.00 3.32
167 168 5.073311 ACAAAAGTCGATCAAGCTAGCTA 57.927 39.130 19.70 3.08 0.00 3.32
168 169 5.665459 ACAAAAGTCGATCAAGCTAGCTAT 58.335 37.500 19.70 8.92 0.00 2.97
169 170 5.521735 ACAAAAGTCGATCAAGCTAGCTATG 59.478 40.000 19.70 17.54 0.00 2.23
170 171 3.296322 AGTCGATCAAGCTAGCTATGC 57.704 47.619 19.70 7.18 0.00 3.14
171 172 2.625314 AGTCGATCAAGCTAGCTATGCA 59.375 45.455 19.70 2.28 0.00 3.96
172 173 2.728839 GTCGATCAAGCTAGCTATGCAC 59.271 50.000 19.70 13.09 0.00 4.57
173 174 1.718178 CGATCAAGCTAGCTATGCACG 59.282 52.381 19.70 19.15 0.00 5.34
174 175 2.748605 GATCAAGCTAGCTATGCACGT 58.251 47.619 19.70 0.00 0.00 4.49
175 176 3.609409 CGATCAAGCTAGCTATGCACGTA 60.609 47.826 19.70 3.10 0.00 3.57
176 177 3.079960 TCAAGCTAGCTATGCACGTAC 57.920 47.619 19.70 0.00 0.00 3.67
177 178 2.688446 TCAAGCTAGCTATGCACGTACT 59.312 45.455 19.70 0.00 0.00 2.73
178 179 3.046390 CAAGCTAGCTATGCACGTACTC 58.954 50.000 19.70 0.00 0.00 2.59
179 180 2.577700 AGCTAGCTATGCACGTACTCT 58.422 47.619 17.69 0.00 0.00 3.24
180 181 2.550606 AGCTAGCTATGCACGTACTCTC 59.449 50.000 17.69 0.00 0.00 3.20
181 182 2.350964 GCTAGCTATGCACGTACTCTCC 60.351 54.545 7.70 0.00 0.00 3.71
182 183 1.763968 AGCTATGCACGTACTCTCCA 58.236 50.000 0.00 0.00 0.00 3.86
183 184 2.100197 AGCTATGCACGTACTCTCCAA 58.900 47.619 0.00 0.00 0.00 3.53
184 185 2.695666 AGCTATGCACGTACTCTCCAAT 59.304 45.455 0.00 0.00 0.00 3.16
185 186 3.133003 AGCTATGCACGTACTCTCCAATT 59.867 43.478 0.00 0.00 0.00 2.32
186 187 3.491267 GCTATGCACGTACTCTCCAATTC 59.509 47.826 0.00 0.00 0.00 2.17
187 188 3.610040 ATGCACGTACTCTCCAATTCA 57.390 42.857 0.00 0.00 0.00 2.57
188 189 3.394674 TGCACGTACTCTCCAATTCAA 57.605 42.857 0.00 0.00 0.00 2.69
189 190 3.937814 TGCACGTACTCTCCAATTCAAT 58.062 40.909 0.00 0.00 0.00 2.57
190 191 3.932710 TGCACGTACTCTCCAATTCAATC 59.067 43.478 0.00 0.00 0.00 2.67
191 192 3.932710 GCACGTACTCTCCAATTCAATCA 59.067 43.478 0.00 0.00 0.00 2.57
192 193 4.391830 GCACGTACTCTCCAATTCAATCAA 59.608 41.667 0.00 0.00 0.00 2.57
193 194 5.446473 GCACGTACTCTCCAATTCAATCAAG 60.446 44.000 0.00 0.00 0.00 3.02
194 195 5.639506 CACGTACTCTCCAATTCAATCAAGT 59.360 40.000 0.00 0.00 0.00 3.16
195 196 6.811665 CACGTACTCTCCAATTCAATCAAGTA 59.188 38.462 0.00 0.00 0.00 2.24
196 197 6.812160 ACGTACTCTCCAATTCAATCAAGTAC 59.188 38.462 0.00 0.00 36.24 2.73
197 198 6.811665 CGTACTCTCCAATTCAATCAAGTACA 59.188 38.462 0.00 0.00 38.35 2.90
198 199 7.492669 CGTACTCTCCAATTCAATCAAGTACAT 59.507 37.037 0.00 0.00 38.35 2.29
199 200 7.621428 ACTCTCCAATTCAATCAAGTACATG 57.379 36.000 0.00 0.00 0.00 3.21
200 201 7.397221 ACTCTCCAATTCAATCAAGTACATGA 58.603 34.615 2.84 2.84 0.00 3.07
201 202 8.051535 ACTCTCCAATTCAATCAAGTACATGAT 58.948 33.333 7.76 7.76 41.74 2.45
202 203 9.551734 CTCTCCAATTCAATCAAGTACATGATA 57.448 33.333 13.61 0.00 39.08 2.15
203 204 9.904198 TCTCCAATTCAATCAAGTACATGATAA 57.096 29.630 13.61 6.41 39.08 1.75
205 206 8.623903 TCCAATTCAATCAAGTACATGATAAGC 58.376 33.333 13.61 0.00 39.08 3.09
206 207 8.627403 CCAATTCAATCAAGTACATGATAAGCT 58.373 33.333 13.61 0.00 39.08 3.74
207 208 9.447040 CAATTCAATCAAGTACATGATAAGCTG 57.553 33.333 13.61 8.68 39.08 4.24
208 209 7.558161 TTCAATCAAGTACATGATAAGCTGG 57.442 36.000 13.61 1.55 39.08 4.85
209 210 6.057533 TCAATCAAGTACATGATAAGCTGGG 58.942 40.000 13.61 0.07 39.08 4.45
210 211 4.422073 TCAAGTACATGATAAGCTGGGG 57.578 45.455 0.00 0.00 0.00 4.96
211 212 2.880890 CAAGTACATGATAAGCTGGGGC 59.119 50.000 0.00 0.00 39.06 5.80
212 213 2.126882 AGTACATGATAAGCTGGGGCA 58.873 47.619 0.00 0.00 41.70 5.36
213 214 2.158755 AGTACATGATAAGCTGGGGCAC 60.159 50.000 0.00 0.00 41.70 5.01
214 215 0.921896 ACATGATAAGCTGGGGCACT 59.078 50.000 0.00 0.00 41.70 4.40
215 216 1.133976 ACATGATAAGCTGGGGCACTC 60.134 52.381 0.00 0.00 41.70 3.51
216 217 0.107456 ATGATAAGCTGGGGCACTCG 59.893 55.000 0.00 0.00 41.70 4.18
217 218 0.975556 TGATAAGCTGGGGCACTCGA 60.976 55.000 0.00 0.00 41.70 4.04
218 219 0.530870 GATAAGCTGGGGCACTCGAC 60.531 60.000 0.00 0.00 41.70 4.20
219 220 0.978146 ATAAGCTGGGGCACTCGACT 60.978 55.000 0.00 0.00 41.70 4.18
220 221 0.323999 TAAGCTGGGGCACTCGACTA 60.324 55.000 0.00 0.00 41.70 2.59
221 222 1.608717 AAGCTGGGGCACTCGACTAG 61.609 60.000 0.00 0.00 41.70 2.57
222 223 2.052690 GCTGGGGCACTCGACTAGA 61.053 63.158 0.00 0.00 38.54 2.43
223 224 1.605058 GCTGGGGCACTCGACTAGAA 61.605 60.000 0.00 0.00 38.54 2.10
224 225 0.173708 CTGGGGCACTCGACTAGAAC 59.826 60.000 0.00 0.00 0.00 3.01
225 226 0.541063 TGGGGCACTCGACTAGAACA 60.541 55.000 0.00 0.00 0.00 3.18
226 227 0.606604 GGGGCACTCGACTAGAACAA 59.393 55.000 0.00 0.00 0.00 2.83
227 228 1.207329 GGGGCACTCGACTAGAACAAT 59.793 52.381 0.00 0.00 0.00 2.71
228 229 2.541556 GGGCACTCGACTAGAACAATC 58.458 52.381 0.00 0.00 0.00 2.67
229 230 2.166664 GGGCACTCGACTAGAACAATCT 59.833 50.000 0.00 0.00 39.82 2.40
230 231 3.182967 GGCACTCGACTAGAACAATCTG 58.817 50.000 0.00 0.00 37.10 2.90
231 232 3.367498 GGCACTCGACTAGAACAATCTGT 60.367 47.826 0.00 0.00 37.10 3.41
232 233 4.142447 GGCACTCGACTAGAACAATCTGTA 60.142 45.833 0.00 0.00 37.10 2.74
233 234 5.450688 GGCACTCGACTAGAACAATCTGTAT 60.451 44.000 0.00 0.00 37.10 2.29
234 235 6.238676 GGCACTCGACTAGAACAATCTGTATA 60.239 42.308 0.00 0.00 37.10 1.47
235 236 6.633634 GCACTCGACTAGAACAATCTGTATAC 59.366 42.308 0.00 0.00 37.10 1.47
236 237 7.678927 GCACTCGACTAGAACAATCTGTATACA 60.679 40.741 5.25 5.25 37.10 2.29
237 238 8.346300 CACTCGACTAGAACAATCTGTATACAT 58.654 37.037 5.91 0.00 37.10 2.29
238 239 8.904834 ACTCGACTAGAACAATCTGTATACATT 58.095 33.333 5.91 0.00 37.10 2.71
239 240 9.175060 CTCGACTAGAACAATCTGTATACATTG 57.825 37.037 14.79 14.79 37.10 2.82
240 241 8.683615 TCGACTAGAACAATCTGTATACATTGT 58.316 33.333 15.86 15.86 43.61 2.71
252 253 8.795786 TCTGTATACATTGTTGAAAAGTTTGC 57.204 30.769 5.91 0.00 0.00 3.68
253 254 8.409371 TCTGTATACATTGTTGAAAAGTTTGCA 58.591 29.630 5.91 0.00 0.00 4.08
254 255 8.346476 TGTATACATTGTTGAAAAGTTTGCAC 57.654 30.769 0.08 0.00 0.00 4.57
255 256 8.194104 TGTATACATTGTTGAAAAGTTTGCACT 58.806 29.630 0.08 0.00 33.11 4.40
256 257 9.030301 GTATACATTGTTGAAAAGTTTGCACTT 57.970 29.630 0.00 0.00 45.89 3.16
621 622 3.420839 GTGGTCACACAAAACTCTTGG 57.579 47.619 0.00 0.00 46.90 3.61
622 623 2.752903 GTGGTCACACAAAACTCTTGGT 59.247 45.455 0.00 0.00 46.90 3.67
623 624 3.942748 GTGGTCACACAAAACTCTTGGTA 59.057 43.478 0.00 0.00 46.90 3.25
624 625 4.396790 GTGGTCACACAAAACTCTTGGTAA 59.603 41.667 0.00 0.00 46.90 2.85
625 626 4.396790 TGGTCACACAAAACTCTTGGTAAC 59.603 41.667 0.00 0.00 0.00 2.50
626 627 4.638865 GGTCACACAAAACTCTTGGTAACT 59.361 41.667 0.00 0.00 37.61 2.24
627 628 5.124936 GGTCACACAAAACTCTTGGTAACTT 59.875 40.000 0.00 0.00 37.61 2.66
628 629 6.316890 GGTCACACAAAACTCTTGGTAACTTA 59.683 38.462 0.00 0.00 37.61 2.24
629 630 7.148205 GGTCACACAAAACTCTTGGTAACTTAA 60.148 37.037 0.00 0.00 37.61 1.85
630 631 8.238631 GTCACACAAAACTCTTGGTAACTTAAA 58.761 33.333 0.00 0.00 37.61 1.52
631 632 8.794553 TCACACAAAACTCTTGGTAACTTAAAA 58.205 29.630 0.00 0.00 37.61 1.52
632 633 8.856247 CACACAAAACTCTTGGTAACTTAAAAC 58.144 33.333 0.00 0.00 37.61 2.43
633 634 8.578151 ACACAAAACTCTTGGTAACTTAAAACA 58.422 29.630 0.00 0.00 37.61 2.83
634 635 9.581099 CACAAAACTCTTGGTAACTTAAAACAT 57.419 29.630 0.00 0.00 37.61 2.71
635 636 9.581099 ACAAAACTCTTGGTAACTTAAAACATG 57.419 29.630 0.00 0.00 37.61 3.21
636 637 9.796120 CAAAACTCTTGGTAACTTAAAACATGA 57.204 29.630 0.00 0.00 37.61 3.07
637 638 9.797556 AAAACTCTTGGTAACTTAAAACATGAC 57.202 29.630 0.00 0.00 37.61 3.06
638 639 8.747538 AACTCTTGGTAACTTAAAACATGACT 57.252 30.769 0.00 0.00 37.61 3.41
639 640 8.747538 ACTCTTGGTAACTTAAAACATGACTT 57.252 30.769 0.00 0.00 37.61 3.01
640 641 8.621286 ACTCTTGGTAACTTAAAACATGACTTG 58.379 33.333 0.00 0.00 37.61 3.16
641 642 8.740123 TCTTGGTAACTTAAAACATGACTTGA 57.260 30.769 0.00 0.00 37.61 3.02
642 643 9.179909 TCTTGGTAACTTAAAACATGACTTGAA 57.820 29.630 0.00 0.00 37.61 2.69
643 644 9.450807 CTTGGTAACTTAAAACATGACTTGAAG 57.549 33.333 0.00 3.90 37.61 3.02
644 645 8.740123 TGGTAACTTAAAACATGACTTGAAGA 57.260 30.769 13.24 0.00 37.61 2.87
645 646 9.179909 TGGTAACTTAAAACATGACTTGAAGAA 57.820 29.630 13.24 0.00 37.61 2.52
654 655 9.736023 AAAACATGACTTGAAGAAAACTACATC 57.264 29.630 0.00 0.00 0.00 3.06
655 656 7.121974 ACATGACTTGAAGAAAACTACATCG 57.878 36.000 0.00 0.00 0.00 3.84
656 657 5.591643 TGACTTGAAGAAAACTACATCGC 57.408 39.130 0.00 0.00 0.00 4.58
657 658 4.451096 TGACTTGAAGAAAACTACATCGCC 59.549 41.667 0.00 0.00 0.00 5.54
658 659 4.642429 ACTTGAAGAAAACTACATCGCCT 58.358 39.130 0.00 0.00 0.00 5.52
659 660 4.452455 ACTTGAAGAAAACTACATCGCCTG 59.548 41.667 0.00 0.00 0.00 4.85
660 661 4.002906 TGAAGAAAACTACATCGCCTGT 57.997 40.909 0.00 0.00 42.13 4.00
661 662 3.745975 TGAAGAAAACTACATCGCCTGTG 59.254 43.478 1.25 0.00 38.92 3.66
662 663 2.076863 AGAAAACTACATCGCCTGTGC 58.923 47.619 1.25 0.00 38.92 4.57
663 664 1.130561 GAAAACTACATCGCCTGTGCC 59.869 52.381 1.25 0.00 38.92 5.01
664 665 0.036164 AAACTACATCGCCTGTGCCA 59.964 50.000 1.25 0.00 38.92 4.92
665 666 0.673644 AACTACATCGCCTGTGCCAC 60.674 55.000 0.00 0.00 38.92 5.01
666 667 1.079197 CTACATCGCCTGTGCCACA 60.079 57.895 0.00 0.00 38.92 4.17
667 668 1.079197 TACATCGCCTGTGCCACAG 60.079 57.895 18.02 18.02 45.53 3.66
676 677 3.817187 TGTGCCACAGATTTGACCA 57.183 47.368 0.00 0.00 0.00 4.02
677 678 2.064434 TGTGCCACAGATTTGACCAA 57.936 45.000 0.00 0.00 0.00 3.67
678 679 2.596346 TGTGCCACAGATTTGACCAAT 58.404 42.857 0.00 0.00 0.00 3.16
679 680 3.760738 TGTGCCACAGATTTGACCAATA 58.239 40.909 0.00 0.00 0.00 1.90
680 681 4.343231 TGTGCCACAGATTTGACCAATAT 58.657 39.130 0.00 0.00 0.00 1.28
681 682 4.398988 TGTGCCACAGATTTGACCAATATC 59.601 41.667 0.00 0.00 0.00 1.63
682 683 4.641989 GTGCCACAGATTTGACCAATATCT 59.358 41.667 0.00 0.00 0.00 1.98
683 684 5.126061 GTGCCACAGATTTGACCAATATCTT 59.874 40.000 0.00 0.00 0.00 2.40
684 685 5.357878 TGCCACAGATTTGACCAATATCTTC 59.642 40.000 0.00 0.00 0.00 2.87
685 686 5.591877 GCCACAGATTTGACCAATATCTTCT 59.408 40.000 0.00 0.00 0.00 2.85
686 687 6.096001 GCCACAGATTTGACCAATATCTTCTT 59.904 38.462 0.00 0.00 0.00 2.52
687 688 7.283127 GCCACAGATTTGACCAATATCTTCTTA 59.717 37.037 0.00 0.00 0.00 2.10
688 689 8.834465 CCACAGATTTGACCAATATCTTCTTAG 58.166 37.037 0.00 0.00 0.00 2.18
689 690 8.341173 CACAGATTTGACCAATATCTTCTTAGC 58.659 37.037 0.00 0.00 0.00 3.09
690 691 8.270744 ACAGATTTGACCAATATCTTCTTAGCT 58.729 33.333 0.00 0.00 0.00 3.32
691 692 8.557864 CAGATTTGACCAATATCTTCTTAGCTG 58.442 37.037 0.00 0.00 0.00 4.24
692 693 8.489489 AGATTTGACCAATATCTTCTTAGCTGA 58.511 33.333 0.00 0.00 0.00 4.26
693 694 7.849804 TTTGACCAATATCTTCTTAGCTGAC 57.150 36.000 0.00 0.00 0.00 3.51
694 695 5.592054 TGACCAATATCTTCTTAGCTGACG 58.408 41.667 0.00 0.00 0.00 4.35
695 696 5.359860 TGACCAATATCTTCTTAGCTGACGA 59.640 40.000 0.00 0.00 0.00 4.20
696 697 5.837437 ACCAATATCTTCTTAGCTGACGAG 58.163 41.667 0.00 0.00 0.00 4.18
697 698 5.594725 ACCAATATCTTCTTAGCTGACGAGA 59.405 40.000 0.00 0.00 0.00 4.04
698 699 6.096987 ACCAATATCTTCTTAGCTGACGAGAA 59.903 38.462 0.00 0.02 0.00 2.87
699 700 6.980978 CCAATATCTTCTTAGCTGACGAGAAA 59.019 38.462 0.00 0.00 0.00 2.52
700 701 7.655328 CCAATATCTTCTTAGCTGACGAGAAAT 59.345 37.037 0.00 1.57 0.00 2.17
701 702 9.039870 CAATATCTTCTTAGCTGACGAGAAATT 57.960 33.333 0.00 0.00 0.00 1.82
702 703 9.606631 AATATCTTCTTAGCTGACGAGAAATTT 57.393 29.630 0.00 0.00 0.00 1.82
703 704 7.913674 ATCTTCTTAGCTGACGAGAAATTTT 57.086 32.000 0.00 0.00 0.00 1.82
704 705 7.730364 TCTTCTTAGCTGACGAGAAATTTTT 57.270 32.000 0.00 0.00 0.00 1.94
705 706 7.797819 TCTTCTTAGCTGACGAGAAATTTTTC 58.202 34.615 0.00 0.00 37.45 2.29
726 727 9.762933 TTTTTCTCAATCCATCCTTTTACTTTG 57.237 29.630 0.00 0.00 0.00 2.77
727 728 6.515272 TCTCAATCCATCCTTTTACTTTGC 57.485 37.500 0.00 0.00 0.00 3.68
728 729 6.248433 TCTCAATCCATCCTTTTACTTTGCT 58.752 36.000 0.00 0.00 0.00 3.91
729 730 6.375455 TCTCAATCCATCCTTTTACTTTGCTC 59.625 38.462 0.00 0.00 0.00 4.26
730 731 6.248433 TCAATCCATCCTTTTACTTTGCTCT 58.752 36.000 0.00 0.00 0.00 4.09
731 732 7.402054 TCAATCCATCCTTTTACTTTGCTCTA 58.598 34.615 0.00 0.00 0.00 2.43
732 733 8.055181 TCAATCCATCCTTTTACTTTGCTCTAT 58.945 33.333 0.00 0.00 0.00 1.98
733 734 8.689972 CAATCCATCCTTTTACTTTGCTCTATT 58.310 33.333 0.00 0.00 0.00 1.73
734 735 8.829373 ATCCATCCTTTTACTTTGCTCTATTT 57.171 30.769 0.00 0.00 0.00 1.40
735 736 8.650143 TCCATCCTTTTACTTTGCTCTATTTT 57.350 30.769 0.00 0.00 0.00 1.82
736 737 9.088987 TCCATCCTTTTACTTTGCTCTATTTTT 57.911 29.630 0.00 0.00 0.00 1.94
782 783 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
785 786 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
800 810 0.529992 GAAGACTCGTATTGGGCCGG 60.530 60.000 0.00 0.00 0.00 6.13
842 852 1.050009 GCAACGAACGCCTTTTTAGC 58.950 50.000 0.00 0.00 0.00 3.09
945 976 3.626596 TCCCCCTCTGGCTCCCTT 61.627 66.667 0.00 0.00 0.00 3.95
1095 1126 1.679032 CGGGAAGCCGGAAATTTCTCT 60.679 52.381 17.42 9.59 0.00 3.10
1272 1303 1.209128 CGCATCATCAAGGTCCGTAC 58.791 55.000 0.00 0.00 0.00 3.67
1353 1385 1.215382 CGAGCGGTGTTCCTCATCA 59.785 57.895 0.00 0.00 0.00 3.07
1583 1630 8.079203 TGTGTTACAAATTAGCAATTGTGTAGG 58.921 33.333 7.40 0.00 31.98 3.18
1605 1652 5.094134 GGAATATCTCGGTCGCTGTTATAC 58.906 45.833 0.00 0.00 0.00 1.47
1668 1715 7.857885 GGCAAGAAGCTAAATATGTGTATTGTC 59.142 37.037 0.00 0.00 44.79 3.18
1728 1775 5.512942 TGATGTTTGGATCCTAAGGTTGA 57.487 39.130 14.23 0.00 0.00 3.18
1729 1776 5.253330 TGATGTTTGGATCCTAAGGTTGAC 58.747 41.667 14.23 0.00 0.00 3.18
1748 1795 4.334552 TGACATATGGACATTGTTGCTGT 58.665 39.130 7.80 0.00 0.00 4.40
1787 1834 2.243810 GAGGACGAGATAAGGCCAGAT 58.756 52.381 5.01 0.00 39.93 2.90
2013 2063 2.100749 ACACATGGATTCGTCGATAGCA 59.899 45.455 0.00 0.00 0.00 3.49
2034 2084 4.797275 GCATTTTTCTGGTTCACCTGGAAG 60.797 45.833 0.00 0.00 34.49 3.46
2040 2090 3.725754 GTTCACCTGGAAGCTTGGA 57.274 52.632 2.10 0.00 35.82 3.53
2056 2106 3.193267 GCTTGGAAATGATAAGTGCCACA 59.807 43.478 0.00 0.00 0.00 4.17
2163 2213 7.977293 ACGGCAAGTTTCTGTTAAAAATAAACT 59.023 29.630 0.00 0.00 40.98 2.66
2172 2222 6.635239 TCTGTTAAAAATAAACTGAAGCACGC 59.365 34.615 0.00 0.00 33.53 5.34
2233 2283 8.071368 TCACGTAACTAAACTTGCCATAAAAAG 58.929 33.333 0.00 0.00 0.00 2.27
2234 2284 6.859508 ACGTAACTAAACTTGCCATAAAAAGC 59.140 34.615 0.00 0.00 0.00 3.51
2273 2323 2.412089 GCTTGTACCTGATGTTCGACAC 59.588 50.000 0.00 0.00 0.00 3.67
2276 2326 5.456548 TTGTACCTGATGTTCGACACTTA 57.543 39.130 0.00 0.00 0.00 2.24
2448 2498 2.496899 AGCCATGTTTTCCTCGTCAT 57.503 45.000 0.00 0.00 0.00 3.06
2556 2606 3.710326 ACCGTTTTTCTTCTTCCTTGC 57.290 42.857 0.00 0.00 0.00 4.01
2661 2712 5.183904 AGCACACAATTTTTGGGAGAGTATC 59.816 40.000 0.00 0.00 37.55 2.24
2784 2835 1.369091 GCGAACCCCATGCACACTAG 61.369 60.000 0.00 0.00 0.00 2.57
2792 2843 1.379044 ATGCACACTAGGGCTTGCC 60.379 57.895 5.22 2.49 33.86 4.52
2810 2861 8.030106 GGGCTTGCCGTATATCTATCTATTATC 58.970 40.741 5.49 0.00 0.00 1.75
2811 2862 7.751348 GGCTTGCCGTATATCTATCTATTATCG 59.249 40.741 0.00 0.00 0.00 2.92
3022 3074 1.518056 AAGCACGGCTGTTGTCATGG 61.518 55.000 0.00 0.00 39.62 3.66
3235 3508 3.517296 TTGCTAAACCATTCCTCCACA 57.483 42.857 0.00 0.00 0.00 4.17
3286 3582 5.929992 TGGGAAACGACAGATTTTACTAGTG 59.070 40.000 5.39 0.00 0.00 2.74
3334 3630 1.201429 ATGGAGCTCCCTGTTTCCGT 61.201 55.000 29.95 1.35 35.38 4.69
3356 3652 0.035598 TTCGGATGGTTTTCGAGCCA 59.964 50.000 7.69 7.69 39.33 4.75
3381 3677 0.975556 TGGTTATCCTGCGGCTCTCA 60.976 55.000 0.00 0.00 34.23 3.27
3385 3681 1.123077 TATCCTGCGGCTCTCATGTT 58.877 50.000 0.00 0.00 0.00 2.71
3398 3694 6.128282 CGGCTCTCATGTTACAATAACAGTTT 60.128 38.462 7.43 0.00 33.18 2.66
3400 3696 6.524586 GCTCTCATGTTACAATAACAGTTTGC 59.475 38.462 7.43 4.83 33.18 3.68
3429 3732 0.579156 GCCATCTCGCTCGTTGATTC 59.421 55.000 0.00 0.00 0.00 2.52
3442 3745 3.056821 TCGTTGATTCTTCATCGGACAGT 60.057 43.478 6.60 0.00 42.58 3.55
3443 3746 4.157105 TCGTTGATTCTTCATCGGACAGTA 59.843 41.667 6.60 0.00 42.58 2.74
3454 3757 2.025155 TCGGACAGTATGGAGAAGCTC 58.975 52.381 0.00 0.00 43.62 4.09
3475 3778 0.713718 CGCGTCGTTGTTCACTTTCG 60.714 55.000 0.00 0.00 0.00 3.46
3511 3854 0.673644 CTTTTCACCCGCTCATCCGT 60.674 55.000 0.00 0.00 0.00 4.69
3512 3855 0.609151 TTTTCACCCGCTCATCCGTA 59.391 50.000 0.00 0.00 0.00 4.02
3513 3856 0.609151 TTTCACCCGCTCATCCGTAA 59.391 50.000 0.00 0.00 0.00 3.18
3514 3857 0.828022 TTCACCCGCTCATCCGTAAT 59.172 50.000 0.00 0.00 0.00 1.89
3515 3858 0.104120 TCACCCGCTCATCCGTAATG 59.896 55.000 0.00 0.00 36.65 1.90
3516 3859 0.880278 CACCCGCTCATCCGTAATGG 60.880 60.000 0.00 0.00 35.94 3.16
3517 3860 1.961277 CCCGCTCATCCGTAATGGC 60.961 63.158 0.00 0.00 37.80 4.40
3518 3861 1.069765 CCGCTCATCCGTAATGGCT 59.930 57.895 0.00 0.00 37.80 4.75
3519 3862 0.317160 CCGCTCATCCGTAATGGCTA 59.683 55.000 0.00 0.00 37.80 3.93
3520 3863 1.066858 CCGCTCATCCGTAATGGCTAT 60.067 52.381 0.00 0.00 37.80 2.97
3521 3864 2.165641 CCGCTCATCCGTAATGGCTATA 59.834 50.000 0.00 0.00 37.80 1.31
3522 3865 3.368013 CCGCTCATCCGTAATGGCTATAA 60.368 47.826 0.00 0.00 37.80 0.98
3523 3866 4.242475 CGCTCATCCGTAATGGCTATAAA 58.758 43.478 0.00 0.00 37.80 1.40
3524 3867 4.327357 CGCTCATCCGTAATGGCTATAAAG 59.673 45.833 0.00 0.00 37.80 1.85
3601 3944 2.154798 TATCGGAGGCATGCTACGGC 62.155 60.000 18.92 0.00 39.26 5.68
3620 3985 3.685550 CGGCCTCTGGTTGAATTTATCCT 60.686 47.826 0.00 0.00 0.00 3.24
3622 3987 4.526970 GCCTCTGGTTGAATTTATCCTGA 58.473 43.478 6.70 6.70 0.00 3.86
3627 3992 7.504911 CCTCTGGTTGAATTTATCCTGATCATT 59.495 37.037 0.00 0.00 0.00 2.57
3640 4012 5.957798 TCCTGATCATTTGTTGAATTCAGC 58.042 37.500 14.76 14.76 38.98 4.26
3665 4037 3.983044 ATTTAGAGAAAGTGCGGGTCT 57.017 42.857 0.00 0.00 0.00 3.85
3667 4039 4.451629 TTTAGAGAAAGTGCGGGTCTAG 57.548 45.455 0.00 0.00 0.00 2.43
3680 4052 1.751351 GGGTCTAGGCCTGAAAATTGC 59.249 52.381 17.99 0.00 0.00 3.56
3683 4055 2.096013 GTCTAGGCCTGAAAATTGCGAC 59.904 50.000 17.99 4.12 0.00 5.19
3694 4066 1.800805 AATTGCGACCAGAGTCAGTG 58.199 50.000 0.00 0.00 43.73 3.66
3775 4147 0.107165 TCCTCGAGCTCGGATTCTGA 60.107 55.000 33.98 18.31 40.29 3.27
3778 4150 0.743345 TCGAGCTCGGATTCTGACGA 60.743 55.000 33.98 9.52 40.29 4.20
3799 4171 3.206246 CGTGGTTGTTGGTGGCGT 61.206 61.111 0.00 0.00 0.00 5.68
3859 4231 5.670485 TCTTGCTTATCCTTCGATTGCTTA 58.330 37.500 0.00 0.00 31.81 3.09
3860 4232 6.291377 TCTTGCTTATCCTTCGATTGCTTAT 58.709 36.000 0.00 0.00 31.81 1.73
3932 4305 5.613358 ACCTTCAAGAGATTGTTTTAGCG 57.387 39.130 0.00 0.00 0.00 4.26
3953 4326 0.871722 TTGCTAAAGCGCAACATCGT 59.128 45.000 11.47 0.00 44.30 3.73
3954 4327 0.442310 TGCTAAAGCGCAACATCGTC 59.558 50.000 11.47 0.00 45.83 4.20
3955 4328 0.442310 GCTAAAGCGCAACATCGTCA 59.558 50.000 11.47 0.00 0.00 4.35
3968 4341 5.374080 CAACATCGTCACACATTTGTAGTC 58.626 41.667 0.00 0.00 33.30 2.59
3971 4344 1.724623 CGTCACACATTTGTAGTCGGG 59.275 52.381 0.00 0.00 33.30 5.14
4002 4375 9.311916 CAAAGTTGACTCCACAAAAATTGATAA 57.688 29.630 0.00 0.00 0.00 1.75
4003 4376 8.871686 AAGTTGACTCCACAAAAATTGATAAC 57.128 30.769 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.880340 CTCTTCGTGATGCGCCTCC 60.880 63.158 4.18 0.00 41.07 4.30
3 4 0.249238 ATCTCTTCGTGATGCGCCTC 60.249 55.000 4.18 5.02 41.07 4.70
4 5 0.529337 CATCTCTTCGTGATGCGCCT 60.529 55.000 4.18 0.00 41.07 5.52
5 6 0.528466 TCATCTCTTCGTGATGCGCC 60.528 55.000 4.18 0.00 40.59 6.53
6 7 0.574454 GTCATCTCTTCGTGATGCGC 59.426 55.000 0.00 0.00 40.59 6.09
7 8 0.842613 CGTCATCTCTTCGTGATGCG 59.157 55.000 0.00 0.00 40.59 4.73
8 9 1.914634 ACGTCATCTCTTCGTGATGC 58.085 50.000 0.00 0.00 40.59 3.91
9 10 3.501950 TCAACGTCATCTCTTCGTGATG 58.498 45.455 0.00 0.00 41.75 3.07
11 12 3.636282 TTCAACGTCATCTCTTCGTGA 57.364 42.857 0.00 0.00 37.85 4.35
12 13 4.910746 AATTCAACGTCATCTCTTCGTG 57.089 40.909 0.00 0.00 37.85 4.35
13 14 6.918569 CCTATAATTCAACGTCATCTCTTCGT 59.081 38.462 0.00 0.00 39.49 3.85
14 15 6.363626 CCCTATAATTCAACGTCATCTCTTCG 59.636 42.308 0.00 0.00 0.00 3.79
15 16 7.434492 TCCCTATAATTCAACGTCATCTCTTC 58.566 38.462 0.00 0.00 0.00 2.87
16 17 7.361457 TCCCTATAATTCAACGTCATCTCTT 57.639 36.000 0.00 0.00 0.00 2.85
17 18 6.978674 TCCCTATAATTCAACGTCATCTCT 57.021 37.500 0.00 0.00 0.00 3.10
18 19 8.433421 TTTTCCCTATAATTCAACGTCATCTC 57.567 34.615 0.00 0.00 0.00 2.75
19 20 8.980481 ATTTTCCCTATAATTCAACGTCATCT 57.020 30.769 0.00 0.00 0.00 2.90
22 23 9.893634 TCTTATTTTCCCTATAATTCAACGTCA 57.106 29.630 0.00 0.00 0.00 4.35
30 31 9.257651 CGTTCGTCTCTTATTTTCCCTATAATT 57.742 33.333 0.00 0.00 0.00 1.40
31 32 8.419442 ACGTTCGTCTCTTATTTTCCCTATAAT 58.581 33.333 0.00 0.00 0.00 1.28
32 33 7.775120 ACGTTCGTCTCTTATTTTCCCTATAA 58.225 34.615 0.00 0.00 0.00 0.98
33 34 7.338800 ACGTTCGTCTCTTATTTTCCCTATA 57.661 36.000 0.00 0.00 0.00 1.31
34 35 6.218108 ACGTTCGTCTCTTATTTTCCCTAT 57.782 37.500 0.00 0.00 0.00 2.57
35 36 5.393461 GGACGTTCGTCTCTTATTTTCCCTA 60.393 44.000 21.52 0.00 35.64 3.53
36 37 4.492611 GACGTTCGTCTCTTATTTTCCCT 58.507 43.478 16.50 0.00 32.82 4.20
37 38 3.615937 GGACGTTCGTCTCTTATTTTCCC 59.384 47.826 21.52 1.32 35.64 3.97
38 39 3.615937 GGGACGTTCGTCTCTTATTTTCC 59.384 47.826 21.52 9.64 33.16 3.13
39 40 4.240096 TGGGACGTTCGTCTCTTATTTTC 58.760 43.478 22.57 5.60 36.63 2.29
40 41 4.261578 TGGGACGTTCGTCTCTTATTTT 57.738 40.909 22.57 0.00 36.63 1.82
41 42 3.947910 TGGGACGTTCGTCTCTTATTT 57.052 42.857 22.57 0.00 36.63 1.40
42 43 3.947910 TTGGGACGTTCGTCTCTTATT 57.052 42.857 22.57 0.00 36.63 1.40
43 44 5.126707 ACTTATTGGGACGTTCGTCTCTTAT 59.873 40.000 22.57 17.74 36.63 1.73
44 45 4.460382 ACTTATTGGGACGTTCGTCTCTTA 59.540 41.667 22.57 12.99 36.63 2.10
45 46 3.257624 ACTTATTGGGACGTTCGTCTCTT 59.742 43.478 22.57 14.05 36.63 2.85
46 47 2.824341 ACTTATTGGGACGTTCGTCTCT 59.176 45.455 22.57 8.99 36.63 3.10
47 48 2.921754 CACTTATTGGGACGTTCGTCTC 59.078 50.000 21.52 19.31 36.25 3.36
48 49 2.298163 ACACTTATTGGGACGTTCGTCT 59.702 45.455 21.52 7.49 35.64 4.18
49 50 2.680577 ACACTTATTGGGACGTTCGTC 58.319 47.619 15.66 15.66 34.65 4.20
50 51 2.825861 ACACTTATTGGGACGTTCGT 57.174 45.000 0.00 0.00 0.00 3.85
51 52 4.178540 ACATACACTTATTGGGACGTTCG 58.821 43.478 0.00 0.00 0.00 3.95
52 53 6.490566 AAACATACACTTATTGGGACGTTC 57.509 37.500 0.00 0.00 0.00 3.95
53 54 6.887626 AAAACATACACTTATTGGGACGTT 57.112 33.333 0.00 0.00 0.00 3.99
54 55 6.093082 GCTAAAACATACACTTATTGGGACGT 59.907 38.462 0.00 0.00 0.00 4.34
55 56 6.315393 AGCTAAAACATACACTTATTGGGACG 59.685 38.462 0.00 0.00 0.00 4.79
56 57 7.625828 AGCTAAAACATACACTTATTGGGAC 57.374 36.000 0.00 0.00 0.00 4.46
57 58 9.914834 ATAAGCTAAAACATACACTTATTGGGA 57.085 29.630 0.00 0.00 28.51 4.37
59 60 9.864034 CGATAAGCTAAAACATACACTTATTGG 57.136 33.333 0.00 0.00 32.11 3.16
60 61 9.370126 GCGATAAGCTAAAACATACACTTATTG 57.630 33.333 0.00 0.00 44.04 1.90
79 80 1.201921 GGCAACAACTCGTGCGATAAG 60.202 52.381 0.00 0.00 0.00 1.73
80 81 0.793861 GGCAACAACTCGTGCGATAA 59.206 50.000 0.00 0.00 0.00 1.75
81 82 1.348538 CGGCAACAACTCGTGCGATA 61.349 55.000 0.00 0.00 0.00 2.92
82 83 2.667318 CGGCAACAACTCGTGCGAT 61.667 57.895 0.00 0.00 0.00 4.58
83 84 3.334751 CGGCAACAACTCGTGCGA 61.335 61.111 0.00 0.00 0.00 5.10
84 85 3.281751 CTCGGCAACAACTCGTGCG 62.282 63.158 0.00 0.00 0.00 5.34
85 86 2.551270 CTCGGCAACAACTCGTGC 59.449 61.111 0.00 0.00 0.00 5.34
86 87 2.317609 CCCTCGGCAACAACTCGTG 61.318 63.158 0.00 0.00 0.00 4.35
87 88 2.030562 CCCTCGGCAACAACTCGT 59.969 61.111 0.00 0.00 0.00 4.18
88 89 1.164041 AAACCCTCGGCAACAACTCG 61.164 55.000 0.00 0.00 0.00 4.18
89 90 1.001706 GAAAACCCTCGGCAACAACTC 60.002 52.381 0.00 0.00 0.00 3.01
90 91 1.029681 GAAAACCCTCGGCAACAACT 58.970 50.000 0.00 0.00 0.00 3.16
91 92 0.741915 TGAAAACCCTCGGCAACAAC 59.258 50.000 0.00 0.00 0.00 3.32
92 93 0.741915 GTGAAAACCCTCGGCAACAA 59.258 50.000 0.00 0.00 0.00 2.83
93 94 1.104577 GGTGAAAACCCTCGGCAACA 61.105 55.000 0.00 0.00 0.00 3.33
94 95 0.822121 AGGTGAAAACCCTCGGCAAC 60.822 55.000 0.00 0.00 0.00 4.17
95 96 0.766131 TAGGTGAAAACCCTCGGCAA 59.234 50.000 0.00 0.00 33.35 4.52
96 97 0.323629 CTAGGTGAAAACCCTCGGCA 59.676 55.000 0.00 0.00 33.35 5.69
97 98 0.611714 TCTAGGTGAAAACCCTCGGC 59.388 55.000 0.00 0.00 33.35 5.54
98 99 2.166664 CTCTCTAGGTGAAAACCCTCGG 59.833 54.545 0.00 0.00 33.35 4.63
99 100 2.417515 GCTCTCTAGGTGAAAACCCTCG 60.418 54.545 0.00 0.00 33.35 4.63
100 101 2.835156 AGCTCTCTAGGTGAAAACCCTC 59.165 50.000 0.00 0.00 33.35 4.30
101 102 2.909217 AGCTCTCTAGGTGAAAACCCT 58.091 47.619 0.00 0.00 36.04 4.34
102 103 3.704800 AAGCTCTCTAGGTGAAAACCC 57.295 47.619 0.00 0.00 32.57 4.11
103 104 5.548406 TGTAAAGCTCTCTAGGTGAAAACC 58.452 41.667 0.00 0.00 32.57 3.27
104 105 8.821894 CATATGTAAAGCTCTCTAGGTGAAAAC 58.178 37.037 0.00 0.00 32.57 2.43
105 106 8.540388 ACATATGTAAAGCTCTCTAGGTGAAAA 58.460 33.333 6.56 0.00 32.57 2.29
106 107 7.981789 CACATATGTAAAGCTCTCTAGGTGAAA 59.018 37.037 8.32 0.00 32.57 2.69
107 108 7.342026 TCACATATGTAAAGCTCTCTAGGTGAA 59.658 37.037 8.32 0.00 32.57 3.18
108 109 6.833933 TCACATATGTAAAGCTCTCTAGGTGA 59.166 38.462 8.32 0.00 32.57 4.02
109 110 7.043961 TCACATATGTAAAGCTCTCTAGGTG 57.956 40.000 8.32 0.00 32.57 4.00
110 111 7.661536 TTCACATATGTAAAGCTCTCTAGGT 57.338 36.000 8.32 0.00 34.01 3.08
111 112 6.644592 GCTTCACATATGTAAAGCTCTCTAGG 59.355 42.308 29.14 5.71 40.68 3.02
112 113 7.636259 GCTTCACATATGTAAAGCTCTCTAG 57.364 40.000 29.14 5.89 40.68 2.43
131 132 4.149922 CGACTTTTGTATCGTGAAGCTTCA 59.850 41.667 25.16 25.16 33.63 3.02
132 133 4.384846 TCGACTTTTGTATCGTGAAGCTTC 59.615 41.667 19.89 19.89 39.38 3.86
133 134 4.304110 TCGACTTTTGTATCGTGAAGCTT 58.696 39.130 0.00 0.00 39.38 3.74
134 135 3.909430 TCGACTTTTGTATCGTGAAGCT 58.091 40.909 0.00 0.00 39.38 3.74
135 136 4.326278 TGATCGACTTTTGTATCGTGAAGC 59.674 41.667 0.00 0.00 39.38 3.86
136 137 6.389622 TTGATCGACTTTTGTATCGTGAAG 57.610 37.500 0.00 0.00 39.38 3.02
137 138 5.163992 GCTTGATCGACTTTTGTATCGTGAA 60.164 40.000 0.00 0.00 39.38 3.18
138 139 4.326278 GCTTGATCGACTTTTGTATCGTGA 59.674 41.667 0.00 0.00 39.38 4.35
139 140 4.327357 AGCTTGATCGACTTTTGTATCGTG 59.673 41.667 0.00 0.00 39.38 4.35
140 141 4.495422 AGCTTGATCGACTTTTGTATCGT 58.505 39.130 0.00 0.00 39.38 3.73
141 142 5.331905 GCTAGCTTGATCGACTTTTGTATCG 60.332 44.000 7.70 0.00 39.72 2.92
142 143 5.751028 AGCTAGCTTGATCGACTTTTGTATC 59.249 40.000 12.68 0.00 0.00 2.24
143 144 5.665459 AGCTAGCTTGATCGACTTTTGTAT 58.335 37.500 12.68 0.00 0.00 2.29
144 145 5.073311 AGCTAGCTTGATCGACTTTTGTA 57.927 39.130 12.68 0.00 0.00 2.41
145 146 3.931578 AGCTAGCTTGATCGACTTTTGT 58.068 40.909 12.68 0.00 0.00 2.83
146 147 5.557893 GCATAGCTAGCTTGATCGACTTTTG 60.558 44.000 24.88 0.00 0.00 2.44
147 148 4.509600 GCATAGCTAGCTTGATCGACTTTT 59.490 41.667 24.88 0.00 0.00 2.27
148 149 4.054671 GCATAGCTAGCTTGATCGACTTT 58.945 43.478 24.88 0.00 0.00 2.66
149 150 3.068732 TGCATAGCTAGCTTGATCGACTT 59.931 43.478 24.88 0.00 0.00 3.01
150 151 2.625314 TGCATAGCTAGCTTGATCGACT 59.375 45.455 24.88 0.00 0.00 4.18
151 152 2.728839 GTGCATAGCTAGCTTGATCGAC 59.271 50.000 24.88 8.86 0.00 4.20
152 153 2.605580 CGTGCATAGCTAGCTTGATCGA 60.606 50.000 24.88 3.35 0.00 3.59
153 154 1.718178 CGTGCATAGCTAGCTTGATCG 59.282 52.381 24.88 20.39 0.00 3.69
154 155 2.748605 ACGTGCATAGCTAGCTTGATC 58.251 47.619 24.88 10.46 0.00 2.92
155 156 2.898729 ACGTGCATAGCTAGCTTGAT 57.101 45.000 24.88 8.55 0.00 2.57
156 157 2.688446 AGTACGTGCATAGCTAGCTTGA 59.312 45.455 24.88 6.02 0.00 3.02
157 158 3.046390 GAGTACGTGCATAGCTAGCTTG 58.954 50.000 24.88 20.22 0.00 4.01
158 159 2.952978 AGAGTACGTGCATAGCTAGCTT 59.047 45.455 24.88 8.10 0.00 3.74
159 160 2.550606 GAGAGTACGTGCATAGCTAGCT 59.449 50.000 23.12 23.12 0.00 3.32
160 161 2.350964 GGAGAGTACGTGCATAGCTAGC 60.351 54.545 6.62 6.62 0.00 3.42
161 162 2.879026 TGGAGAGTACGTGCATAGCTAG 59.121 50.000 6.38 0.00 0.00 3.42
162 163 2.927028 TGGAGAGTACGTGCATAGCTA 58.073 47.619 6.38 0.00 0.00 3.32
163 164 1.763968 TGGAGAGTACGTGCATAGCT 58.236 50.000 6.38 0.00 0.00 3.32
164 165 2.579207 TTGGAGAGTACGTGCATAGC 57.421 50.000 6.38 0.00 0.00 2.97
165 166 4.682787 TGAATTGGAGAGTACGTGCATAG 58.317 43.478 6.38 0.00 0.00 2.23
166 167 4.729227 TGAATTGGAGAGTACGTGCATA 57.271 40.909 6.38 0.00 0.00 3.14
167 168 3.610040 TGAATTGGAGAGTACGTGCAT 57.390 42.857 6.38 0.00 0.00 3.96
168 169 3.394674 TTGAATTGGAGAGTACGTGCA 57.605 42.857 6.38 0.00 0.00 4.57
169 170 3.932710 TGATTGAATTGGAGAGTACGTGC 59.067 43.478 0.00 0.00 0.00 5.34
170 171 5.639506 ACTTGATTGAATTGGAGAGTACGTG 59.360 40.000 0.00 0.00 0.00 4.49
171 172 5.794894 ACTTGATTGAATTGGAGAGTACGT 58.205 37.500 0.00 0.00 0.00 3.57
172 173 6.811665 TGTACTTGATTGAATTGGAGAGTACG 59.188 38.462 0.00 0.00 40.44 3.67
173 174 8.607459 CATGTACTTGATTGAATTGGAGAGTAC 58.393 37.037 2.62 0.00 38.92 2.73
174 175 8.539544 TCATGTACTTGATTGAATTGGAGAGTA 58.460 33.333 7.33 0.00 0.00 2.59
175 176 7.397221 TCATGTACTTGATTGAATTGGAGAGT 58.603 34.615 7.33 0.00 0.00 3.24
176 177 7.854557 TCATGTACTTGATTGAATTGGAGAG 57.145 36.000 7.33 0.00 0.00 3.20
177 178 9.904198 TTATCATGTACTTGATTGAATTGGAGA 57.096 29.630 24.40 4.92 37.51 3.71
179 180 8.623903 GCTTATCATGTACTTGATTGAATTGGA 58.376 33.333 24.40 6.14 37.51 3.53
180 181 8.627403 AGCTTATCATGTACTTGATTGAATTGG 58.373 33.333 24.40 11.21 37.51 3.16
181 182 9.447040 CAGCTTATCATGTACTTGATTGAATTG 57.553 33.333 24.40 14.77 37.51 2.32
182 183 8.627403 CCAGCTTATCATGTACTTGATTGAATT 58.373 33.333 24.40 7.36 37.51 2.17
183 184 7.230108 CCCAGCTTATCATGTACTTGATTGAAT 59.770 37.037 24.40 7.98 37.51 2.57
184 185 6.543465 CCCAGCTTATCATGTACTTGATTGAA 59.457 38.462 24.40 14.95 37.51 2.69
185 186 6.057533 CCCAGCTTATCATGTACTTGATTGA 58.942 40.000 24.40 14.86 37.51 2.57
186 187 5.240183 CCCCAGCTTATCATGTACTTGATTG 59.760 44.000 24.40 17.36 37.51 2.67
187 188 5.380043 CCCCAGCTTATCATGTACTTGATT 58.620 41.667 24.40 12.11 37.51 2.57
188 189 4.747931 GCCCCAGCTTATCATGTACTTGAT 60.748 45.833 23.21 23.21 36.78 2.57
189 190 3.433598 GCCCCAGCTTATCATGTACTTGA 60.434 47.826 13.28 13.28 35.50 3.02
190 191 2.880890 GCCCCAGCTTATCATGTACTTG 59.119 50.000 2.36 2.36 35.50 3.16
191 192 2.509548 TGCCCCAGCTTATCATGTACTT 59.490 45.455 0.00 0.00 40.80 2.24
192 193 2.126882 TGCCCCAGCTTATCATGTACT 58.873 47.619 0.00 0.00 40.80 2.73
193 194 2.158755 AGTGCCCCAGCTTATCATGTAC 60.159 50.000 0.00 0.00 40.80 2.90
194 195 2.104792 GAGTGCCCCAGCTTATCATGTA 59.895 50.000 0.00 0.00 40.80 2.29
195 196 0.921896 AGTGCCCCAGCTTATCATGT 59.078 50.000 0.00 0.00 40.80 3.21
196 197 1.602311 GAGTGCCCCAGCTTATCATG 58.398 55.000 0.00 0.00 40.80 3.07
197 198 0.107456 CGAGTGCCCCAGCTTATCAT 59.893 55.000 0.00 0.00 40.80 2.45
198 199 0.975556 TCGAGTGCCCCAGCTTATCA 60.976 55.000 0.00 0.00 40.80 2.15
199 200 0.530870 GTCGAGTGCCCCAGCTTATC 60.531 60.000 0.00 0.00 40.80 1.75
200 201 0.978146 AGTCGAGTGCCCCAGCTTAT 60.978 55.000 0.00 0.00 40.80 1.73
201 202 0.323999 TAGTCGAGTGCCCCAGCTTA 60.324 55.000 2.10 0.00 40.80 3.09
202 203 1.608717 CTAGTCGAGTGCCCCAGCTT 61.609 60.000 2.10 0.00 40.80 3.74
203 204 2.037367 TAGTCGAGTGCCCCAGCT 59.963 61.111 2.10 0.00 40.80 4.24
204 205 1.605058 TTCTAGTCGAGTGCCCCAGC 61.605 60.000 2.10 0.00 40.48 4.85
205 206 0.173708 GTTCTAGTCGAGTGCCCCAG 59.826 60.000 2.10 0.00 0.00 4.45
206 207 0.541063 TGTTCTAGTCGAGTGCCCCA 60.541 55.000 2.10 0.00 0.00 4.96
207 208 0.606604 TTGTTCTAGTCGAGTGCCCC 59.393 55.000 2.10 0.00 0.00 5.80
208 209 2.166664 AGATTGTTCTAGTCGAGTGCCC 59.833 50.000 2.10 0.00 0.00 5.36
209 210 3.182967 CAGATTGTTCTAGTCGAGTGCC 58.817 50.000 2.10 0.00 0.00 5.01
210 211 3.839293 ACAGATTGTTCTAGTCGAGTGC 58.161 45.455 2.10 0.00 0.00 4.40
211 212 7.694886 TGTATACAGATTGTTCTAGTCGAGTG 58.305 38.462 0.08 0.00 0.00 3.51
212 213 7.860918 TGTATACAGATTGTTCTAGTCGAGT 57.139 36.000 0.08 0.00 0.00 4.18
213 214 9.175060 CAATGTATACAGATTGTTCTAGTCGAG 57.825 37.037 11.91 0.00 32.20 4.04
214 215 8.683615 ACAATGTATACAGATTGTTCTAGTCGA 58.316 33.333 15.86 0.00 43.97 4.20
215 216 8.858003 ACAATGTATACAGATTGTTCTAGTCG 57.142 34.615 15.86 0.00 43.97 4.18
226 227 9.410556 GCAAACTTTTCAACAATGTATACAGAT 57.589 29.630 11.91 0.00 0.00 2.90
227 228 8.409371 TGCAAACTTTTCAACAATGTATACAGA 58.591 29.630 11.91 0.00 0.00 3.41
228 229 8.479280 GTGCAAACTTTTCAACAATGTATACAG 58.521 33.333 11.91 1.09 0.00 2.74
229 230 8.194104 AGTGCAAACTTTTCAACAATGTATACA 58.806 29.630 8.27 8.27 0.00 2.29
230 231 8.574196 AGTGCAAACTTTTCAACAATGTATAC 57.426 30.769 0.00 0.00 0.00 1.47
231 232 9.593134 AAAGTGCAAACTTTTCAACAATGTATA 57.407 25.926 0.00 0.00 36.64 1.47
232 233 8.389603 CAAAGTGCAAACTTTTCAACAATGTAT 58.610 29.630 1.19 0.00 37.80 2.29
233 234 7.148507 CCAAAGTGCAAACTTTTCAACAATGTA 60.149 33.333 1.19 0.00 37.80 2.29
234 235 6.348376 CCAAAGTGCAAACTTTTCAACAATGT 60.348 34.615 1.19 0.00 37.80 2.71
235 236 6.022821 CCAAAGTGCAAACTTTTCAACAATG 58.977 36.000 1.19 0.00 37.80 2.82
236 237 5.936956 TCCAAAGTGCAAACTTTTCAACAAT 59.063 32.000 1.19 0.00 37.80 2.71
237 238 5.300752 TCCAAAGTGCAAACTTTTCAACAA 58.699 33.333 1.19 0.00 37.80 2.83
238 239 4.887748 TCCAAAGTGCAAACTTTTCAACA 58.112 34.783 1.19 0.00 37.80 3.33
239 240 5.854431 TTCCAAAGTGCAAACTTTTCAAC 57.146 34.783 1.19 0.00 37.80 3.18
591 592 6.040054 AGTTTTGTGTGACCACCCTAATAAAC 59.960 38.462 0.00 0.00 41.09 2.01
592 593 6.130569 AGTTTTGTGTGACCACCCTAATAAA 58.869 36.000 0.00 0.00 41.09 1.40
593 594 5.697067 AGTTTTGTGTGACCACCCTAATAA 58.303 37.500 0.00 0.00 41.09 1.40
594 595 5.072600 AGAGTTTTGTGTGACCACCCTAATA 59.927 40.000 0.00 0.00 41.09 0.98
595 596 4.141251 AGAGTTTTGTGTGACCACCCTAAT 60.141 41.667 0.00 0.00 41.09 1.73
596 597 3.201266 AGAGTTTTGTGTGACCACCCTAA 59.799 43.478 0.00 0.00 41.09 2.69
597 598 2.775384 AGAGTTTTGTGTGACCACCCTA 59.225 45.455 0.00 0.00 41.09 3.53
598 599 1.564348 AGAGTTTTGTGTGACCACCCT 59.436 47.619 0.00 0.00 41.09 4.34
599 600 2.052782 AGAGTTTTGTGTGACCACCC 57.947 50.000 0.00 0.00 41.09 4.61
600 601 2.099098 CCAAGAGTTTTGTGTGACCACC 59.901 50.000 0.00 0.00 41.09 4.61
601 602 2.752903 ACCAAGAGTTTTGTGTGACCAC 59.247 45.455 0.00 0.00 42.19 4.16
602 603 3.080300 ACCAAGAGTTTTGTGTGACCA 57.920 42.857 0.00 0.00 0.00 4.02
603 604 4.638865 AGTTACCAAGAGTTTTGTGTGACC 59.361 41.667 6.42 0.00 0.00 4.02
604 605 5.813080 AGTTACCAAGAGTTTTGTGTGAC 57.187 39.130 0.00 0.00 0.00 3.67
605 606 7.925043 TTAAGTTACCAAGAGTTTTGTGTGA 57.075 32.000 0.00 0.00 0.00 3.58
606 607 8.856247 GTTTTAAGTTACCAAGAGTTTTGTGTG 58.144 33.333 0.00 0.00 0.00 3.82
607 608 8.578151 TGTTTTAAGTTACCAAGAGTTTTGTGT 58.422 29.630 0.00 0.00 0.00 3.72
608 609 8.973835 TGTTTTAAGTTACCAAGAGTTTTGTG 57.026 30.769 0.00 0.00 0.00 3.33
609 610 9.581099 CATGTTTTAAGTTACCAAGAGTTTTGT 57.419 29.630 0.00 0.00 0.00 2.83
610 611 9.796120 TCATGTTTTAAGTTACCAAGAGTTTTG 57.204 29.630 0.00 0.00 0.00 2.44
611 612 9.797556 GTCATGTTTTAAGTTACCAAGAGTTTT 57.202 29.630 0.00 0.00 0.00 2.43
612 613 9.185680 AGTCATGTTTTAAGTTACCAAGAGTTT 57.814 29.630 0.00 0.00 0.00 2.66
613 614 8.747538 AGTCATGTTTTAAGTTACCAAGAGTT 57.252 30.769 0.00 0.00 0.00 3.01
614 615 8.621286 CAAGTCATGTTTTAAGTTACCAAGAGT 58.379 33.333 0.00 0.00 0.00 3.24
615 616 8.836413 TCAAGTCATGTTTTAAGTTACCAAGAG 58.164 33.333 0.00 0.00 0.00 2.85
616 617 8.740123 TCAAGTCATGTTTTAAGTTACCAAGA 57.260 30.769 0.00 0.00 0.00 3.02
617 618 9.450807 CTTCAAGTCATGTTTTAAGTTACCAAG 57.549 33.333 0.00 0.00 0.00 3.61
618 619 9.179909 TCTTCAAGTCATGTTTTAAGTTACCAA 57.820 29.630 0.00 0.00 0.00 3.67
619 620 8.740123 TCTTCAAGTCATGTTTTAAGTTACCA 57.260 30.769 0.00 0.00 0.00 3.25
628 629 9.736023 GATGTAGTTTTCTTCAAGTCATGTTTT 57.264 29.630 0.00 0.00 31.42 2.43
629 630 8.070171 CGATGTAGTTTTCTTCAAGTCATGTTT 58.930 33.333 0.00 0.00 31.42 2.83
630 631 7.576236 CGATGTAGTTTTCTTCAAGTCATGTT 58.424 34.615 0.00 0.00 31.42 2.71
631 632 6.347725 GCGATGTAGTTTTCTTCAAGTCATGT 60.348 38.462 0.00 0.00 31.42 3.21
632 633 6.017933 GCGATGTAGTTTTCTTCAAGTCATG 58.982 40.000 0.00 0.00 31.42 3.07
633 634 5.122396 GGCGATGTAGTTTTCTTCAAGTCAT 59.878 40.000 0.00 0.00 31.42 3.06
634 635 4.451096 GGCGATGTAGTTTTCTTCAAGTCA 59.549 41.667 0.00 0.00 31.42 3.41
635 636 4.691216 AGGCGATGTAGTTTTCTTCAAGTC 59.309 41.667 0.00 0.00 31.42 3.01
636 637 4.452455 CAGGCGATGTAGTTTTCTTCAAGT 59.548 41.667 0.00 0.00 31.42 3.16
637 638 4.452455 ACAGGCGATGTAGTTTTCTTCAAG 59.548 41.667 0.00 0.00 41.60 3.02
638 639 4.213270 CACAGGCGATGTAGTTTTCTTCAA 59.787 41.667 0.00 0.00 41.41 2.69
639 640 3.745975 CACAGGCGATGTAGTTTTCTTCA 59.254 43.478 0.00 0.00 41.41 3.02
640 641 3.424962 GCACAGGCGATGTAGTTTTCTTC 60.425 47.826 0.00 0.00 41.41 2.87
641 642 2.484264 GCACAGGCGATGTAGTTTTCTT 59.516 45.455 0.00 0.00 41.41 2.52
642 643 2.076863 GCACAGGCGATGTAGTTTTCT 58.923 47.619 0.00 0.00 41.41 2.52
643 644 1.130561 GGCACAGGCGATGTAGTTTTC 59.869 52.381 0.00 0.00 41.41 2.29
644 645 1.165270 GGCACAGGCGATGTAGTTTT 58.835 50.000 0.00 0.00 41.41 2.43
645 646 0.036164 TGGCACAGGCGATGTAGTTT 59.964 50.000 0.00 0.00 41.41 2.66
646 647 0.673644 GTGGCACAGGCGATGTAGTT 60.674 55.000 13.86 0.00 41.41 2.24
647 648 1.079127 GTGGCACAGGCGATGTAGT 60.079 57.895 13.86 0.00 41.41 2.73
648 649 1.079197 TGTGGCACAGGCGATGTAG 60.079 57.895 17.96 0.00 41.41 2.74
649 650 1.079197 CTGTGGCACAGGCGATGTA 60.079 57.895 34.59 4.04 42.35 2.29
650 651 2.189191 ATCTGTGGCACAGGCGATGT 62.189 55.000 38.88 19.72 45.94 3.06
651 652 1.028330 AATCTGTGGCACAGGCGATG 61.028 55.000 38.88 19.79 45.94 3.84
652 653 0.322816 AAATCTGTGGCACAGGCGAT 60.323 50.000 38.88 26.24 45.94 4.58
653 654 1.073025 AAATCTGTGGCACAGGCGA 59.927 52.632 38.88 25.30 45.94 5.54
654 655 1.210931 CAAATCTGTGGCACAGGCG 59.789 57.895 38.88 23.95 45.94 5.52
655 656 0.242017 GTCAAATCTGTGGCACAGGC 59.758 55.000 38.88 18.77 45.94 4.85
656 657 0.883833 GGTCAAATCTGTGGCACAGG 59.116 55.000 38.88 26.16 45.94 4.00
658 659 2.064434 TTGGTCAAATCTGTGGCACA 57.936 45.000 20.76 20.76 0.00 4.57
659 660 4.641989 AGATATTGGTCAAATCTGTGGCAC 59.358 41.667 11.55 11.55 0.00 5.01
660 661 4.858850 AGATATTGGTCAAATCTGTGGCA 58.141 39.130 0.00 0.00 0.00 4.92
661 662 5.591877 AGAAGATATTGGTCAAATCTGTGGC 59.408 40.000 8.19 0.00 30.50 5.01
662 663 7.636150 AAGAAGATATTGGTCAAATCTGTGG 57.364 36.000 8.19 0.00 30.50 4.17
663 664 8.341173 GCTAAGAAGATATTGGTCAAATCTGTG 58.659 37.037 8.19 0.00 30.50 3.66
664 665 8.270744 AGCTAAGAAGATATTGGTCAAATCTGT 58.729 33.333 0.00 3.26 30.50 3.41
665 666 8.557864 CAGCTAAGAAGATATTGGTCAAATCTG 58.442 37.037 0.00 0.00 30.50 2.90
666 667 8.489489 TCAGCTAAGAAGATATTGGTCAAATCT 58.511 33.333 0.00 0.00 0.00 2.40
667 668 8.555361 GTCAGCTAAGAAGATATTGGTCAAATC 58.445 37.037 0.00 0.00 0.00 2.17
668 669 7.225538 CGTCAGCTAAGAAGATATTGGTCAAAT 59.774 37.037 0.00 0.00 0.00 2.32
669 670 6.535150 CGTCAGCTAAGAAGATATTGGTCAAA 59.465 38.462 0.00 0.00 0.00 2.69
670 671 6.042777 CGTCAGCTAAGAAGATATTGGTCAA 58.957 40.000 0.00 0.00 0.00 3.18
671 672 5.359860 TCGTCAGCTAAGAAGATATTGGTCA 59.640 40.000 0.00 0.00 0.00 4.02
672 673 5.833082 TCGTCAGCTAAGAAGATATTGGTC 58.167 41.667 0.00 0.00 0.00 4.02
673 674 5.594725 TCTCGTCAGCTAAGAAGATATTGGT 59.405 40.000 0.00 0.00 0.00 3.67
674 675 6.078202 TCTCGTCAGCTAAGAAGATATTGG 57.922 41.667 0.00 0.00 0.00 3.16
675 676 7.993821 TTTCTCGTCAGCTAAGAAGATATTG 57.006 36.000 0.00 0.00 31.16 1.90
676 677 9.606631 AAATTTCTCGTCAGCTAAGAAGATATT 57.393 29.630 0.00 0.00 31.16 1.28
677 678 9.606631 AAAATTTCTCGTCAGCTAAGAAGATAT 57.393 29.630 0.00 0.00 31.16 1.63
678 679 9.436957 AAAAATTTCTCGTCAGCTAAGAAGATA 57.563 29.630 0.00 0.00 31.16 1.98
679 680 7.913674 AAAATTTCTCGTCAGCTAAGAAGAT 57.086 32.000 0.00 0.00 31.16 2.40
680 681 7.657761 AGAAAAATTTCTCGTCAGCTAAGAAGA 59.342 33.333 2.59 0.00 43.72 2.87
681 682 7.801752 AGAAAAATTTCTCGTCAGCTAAGAAG 58.198 34.615 2.59 0.00 43.72 2.85
682 683 7.730364 AGAAAAATTTCTCGTCAGCTAAGAA 57.270 32.000 2.59 0.00 43.72 2.52
700 701 9.762933 CAAAGTAAAAGGATGGATTGAGAAAAA 57.237 29.630 0.00 0.00 0.00 1.94
701 702 7.872483 GCAAAGTAAAAGGATGGATTGAGAAAA 59.128 33.333 0.00 0.00 0.00 2.29
702 703 7.233348 AGCAAAGTAAAAGGATGGATTGAGAAA 59.767 33.333 0.00 0.00 0.00 2.52
703 704 6.721208 AGCAAAGTAAAAGGATGGATTGAGAA 59.279 34.615 0.00 0.00 0.00 2.87
704 705 6.248433 AGCAAAGTAAAAGGATGGATTGAGA 58.752 36.000 0.00 0.00 0.00 3.27
705 706 6.376581 AGAGCAAAGTAAAAGGATGGATTGAG 59.623 38.462 0.00 0.00 0.00 3.02
706 707 6.248433 AGAGCAAAGTAAAAGGATGGATTGA 58.752 36.000 0.00 0.00 0.00 2.57
707 708 6.521151 AGAGCAAAGTAAAAGGATGGATTG 57.479 37.500 0.00 0.00 0.00 2.67
708 709 8.829373 AATAGAGCAAAGTAAAAGGATGGATT 57.171 30.769 0.00 0.00 0.00 3.01
709 710 8.829373 AAATAGAGCAAAGTAAAAGGATGGAT 57.171 30.769 0.00 0.00 0.00 3.41
710 711 8.650143 AAAATAGAGCAAAGTAAAAGGATGGA 57.350 30.769 0.00 0.00 0.00 3.41
768 769 7.696992 ATACGAGTCTTCTTCTTCTTCTTCT 57.303 36.000 0.00 0.00 0.00 2.85
782 783 1.520666 CCGGCCCAATACGAGTCTT 59.479 57.895 0.00 0.00 0.00 3.01
785 786 3.476419 CCCCGGCCCAATACGAGT 61.476 66.667 0.00 0.00 0.00 4.18
800 810 0.251209 AGGGGAAAAACTCGAAGCCC 60.251 55.000 0.00 0.00 34.79 5.19
937 968 0.960861 CGACAAAGGGAAAGGGAGCC 60.961 60.000 0.00 0.00 0.00 4.70
1056 1087 4.052229 ACCTCGACGGTGAAGGCG 62.052 66.667 5.85 0.00 46.80 5.52
1095 1126 4.127171 CAACACGAAGAAGAAGAAGGGAA 58.873 43.478 0.00 0.00 0.00 3.97
1272 1303 1.407989 GGAGCATGGAGGGAAAGTGAG 60.408 57.143 0.00 0.00 0.00 3.51
1311 1342 1.038130 ACGGAGCAGGCGTAGAGAAT 61.038 55.000 0.00 0.00 0.00 2.40
1353 1385 0.700564 ATCCTGCATCAACACCACCT 59.299 50.000 0.00 0.00 0.00 4.00
1450 1482 8.286191 AGAAAGACAAAGCTATTTAAGATGGG 57.714 34.615 0.00 0.00 0.00 4.00
1489 1522 5.590530 AGCCTAGAGTGACACTTGAATAG 57.409 43.478 10.01 9.64 0.00 1.73
1583 1630 5.696822 TGTATAACAGCGACCGAGATATTC 58.303 41.667 0.00 0.00 0.00 1.75
1605 1652 2.801063 CAGGCCGAAAACAATGCTATG 58.199 47.619 0.00 0.00 0.00 2.23
1728 1775 4.592942 AGACAGCAACAATGTCCATATGT 58.407 39.130 1.24 0.00 46.68 2.29
1729 1776 5.571784 AAGACAGCAACAATGTCCATATG 57.428 39.130 0.00 0.00 46.68 1.78
1787 1834 4.329545 GCCCCGGTGTGCTTCAGA 62.330 66.667 0.00 0.00 0.00 3.27
1847 1894 3.608316 AGAGTGATGAAGAACTGGCTC 57.392 47.619 0.00 0.00 0.00 4.70
2013 2063 3.321968 GCTTCCAGGTGAACCAGAAAAAT 59.678 43.478 1.62 0.00 38.89 1.82
2034 2084 3.193267 TGTGGCACTTATCATTTCCAAGC 59.807 43.478 19.83 0.00 0.00 4.01
2040 2090 3.407698 TGACGTGTGGCACTTATCATTT 58.592 40.909 19.83 0.00 31.34 2.32
2111 2161 1.551883 ACTGGAATTTGCCATCCTTGC 59.448 47.619 0.00 0.00 37.30 4.01
2163 2213 1.002576 CATGACAACTTGCGTGCTTCA 60.003 47.619 0.00 0.00 0.00 3.02
2233 2283 2.325082 ACATGGCAACTCCGAACGC 61.325 57.895 0.00 0.00 37.80 4.84
2234 2284 1.497278 CACATGGCAACTCCGAACG 59.503 57.895 0.00 0.00 37.80 3.95
2273 2323 9.853177 ATCTGTTAAATAAAGGACCCTGATAAG 57.147 33.333 0.00 0.00 0.00 1.73
2276 2326 8.336235 TCAATCTGTTAAATAAAGGACCCTGAT 58.664 33.333 0.00 0.00 0.00 2.90
2313 2363 9.039870 GTTCCACTTCTCTGTAATCATTATGAG 57.960 37.037 0.29 4.77 0.00 2.90
2385 2435 7.617041 AGGACAATATGAGTTAAGCTTGAAC 57.383 36.000 9.86 9.61 0.00 3.18
2397 2447 8.103948 GTCCCATATTTCAAGGACAATATGAG 57.896 38.462 11.72 1.59 46.61 2.90
2448 2498 7.068226 GCTAGTAAAATTTCCTAGGATTGGCAA 59.932 37.037 13.57 0.68 30.99 4.52
2556 2606 1.133025 GCTCAACATGGACAATTCCCG 59.867 52.381 0.00 0.00 42.01 5.14
2661 2712 5.654497 GCTTAACAATTTCCATTCCTCTGG 58.346 41.667 0.00 0.00 37.66 3.86
2748 2799 2.338015 GCTGCCTGGTGTGGTCATG 61.338 63.158 0.00 0.00 0.00 3.07
2784 2835 5.793030 ATAGATAGATATACGGCAAGCCC 57.207 43.478 5.34 0.00 0.00 5.19
2810 2861 3.119291 TGCCTTTGCATTTACACAAACG 58.881 40.909 0.00 0.00 44.23 3.60
2910 2962 5.695851 AGATCCAACACTTCAACAACATC 57.304 39.130 0.00 0.00 0.00 3.06
3022 3074 7.173390 ACAGCTACAACCAAAGATTAAGAGTTC 59.827 37.037 0.00 0.00 0.00 3.01
3235 3508 0.320771 CAGTGTCGGCTTAACCTGCT 60.321 55.000 0.00 0.00 35.61 4.24
3286 3582 4.096984 CAGATAAGGGAACTGACAAATGGC 59.903 45.833 0.00 0.00 42.68 4.40
3334 3630 1.533731 GCTCGAAAACCATCCGAAACA 59.466 47.619 0.00 0.00 31.59 2.83
3381 3677 4.617298 GCCGGCAAACTGTTATTGTAACAT 60.617 41.667 24.80 0.00 0.00 2.71
3385 3681 2.505405 TGCCGGCAAACTGTTATTGTA 58.495 42.857 30.74 0.00 0.00 2.41
3413 3709 3.510388 TGAAGAATCAACGAGCGAGAT 57.490 42.857 0.00 0.00 30.99 2.75
3429 3732 4.615949 CTTCTCCATACTGTCCGATGAAG 58.384 47.826 0.00 0.00 0.00 3.02
3454 3757 1.768112 AAAGTGAACAACGACGCGGG 61.768 55.000 12.47 4.10 0.00 6.13
3475 3778 0.538287 AAGCAAACAGAGAGGTGCCC 60.538 55.000 0.00 0.00 37.73 5.36
3490 3796 0.960364 GGATGAGCGGGTGAAAAGCA 60.960 55.000 0.00 0.00 0.00 3.91
3517 3860 5.144100 TGGAGAGAAGGAGAGGCTTTATAG 58.856 45.833 0.00 0.00 0.00 1.31
3518 3861 5.144159 TGGAGAGAAGGAGAGGCTTTATA 57.856 43.478 0.00 0.00 0.00 0.98
3519 3862 4.000928 TGGAGAGAAGGAGAGGCTTTAT 57.999 45.455 0.00 0.00 0.00 1.40
3520 3863 3.474798 TGGAGAGAAGGAGAGGCTTTA 57.525 47.619 0.00 0.00 0.00 1.85
3521 3864 2.334006 TGGAGAGAAGGAGAGGCTTT 57.666 50.000 0.00 0.00 0.00 3.51
3522 3865 2.566708 ATGGAGAGAAGGAGAGGCTT 57.433 50.000 0.00 0.00 0.00 4.35
3523 3866 2.566708 AATGGAGAGAAGGAGAGGCT 57.433 50.000 0.00 0.00 0.00 4.58
3524 3867 2.482839 CGAAATGGAGAGAAGGAGAGGC 60.483 54.545 0.00 0.00 0.00 4.70
3525 3868 2.102252 CCGAAATGGAGAGAAGGAGAGG 59.898 54.545 0.00 0.00 42.00 3.69
3526 3869 2.102252 CCCGAAATGGAGAGAAGGAGAG 59.898 54.545 0.00 0.00 42.00 3.20
3527 3870 2.111384 CCCGAAATGGAGAGAAGGAGA 58.889 52.381 0.00 0.00 42.00 3.71
3528 3871 1.834263 ACCCGAAATGGAGAGAAGGAG 59.166 52.381 0.00 0.00 42.00 3.69
3529 3872 1.952621 ACCCGAAATGGAGAGAAGGA 58.047 50.000 0.00 0.00 42.00 3.36
3530 3873 2.789409 AACCCGAAATGGAGAGAAGG 57.211 50.000 0.00 0.00 42.00 3.46
3531 3874 3.561725 GCATAACCCGAAATGGAGAGAAG 59.438 47.826 0.00 0.00 42.00 2.85
3532 3875 3.199946 AGCATAACCCGAAATGGAGAGAA 59.800 43.478 0.00 0.00 42.00 2.87
3533 3876 2.771943 AGCATAACCCGAAATGGAGAGA 59.228 45.455 0.00 0.00 42.00 3.10
3579 3922 0.390472 GTAGCATGCCTCCGATAGCC 60.390 60.000 15.66 0.00 0.00 3.93
3592 3935 1.221840 CAACCAGAGGCCGTAGCAT 59.778 57.895 0.00 0.00 42.56 3.79
3601 3944 6.359804 TGATCAGGATAAATTCAACCAGAGG 58.640 40.000 0.00 0.00 0.00 3.69
3602 3945 8.461249 AATGATCAGGATAAATTCAACCAGAG 57.539 34.615 0.09 0.00 0.00 3.35
3603 3946 8.689061 CAAATGATCAGGATAAATTCAACCAGA 58.311 33.333 0.09 0.00 0.00 3.86
3620 3985 9.932207 ATTTAAGCTGAATTCAACAAATGATCA 57.068 25.926 9.88 0.00 38.03 2.92
3640 4012 6.371825 AGACCCGCACTTTCTCTAAATTTAAG 59.628 38.462 0.00 0.00 0.00 1.85
3658 4030 0.107165 ATTTTCAGGCCTAGACCCGC 60.107 55.000 3.98 0.00 0.00 6.13
3665 4037 1.271652 TGGTCGCAATTTTCAGGCCTA 60.272 47.619 3.98 0.00 0.00 3.93
3667 4039 0.109132 CTGGTCGCAATTTTCAGGCC 60.109 55.000 0.00 0.00 0.00 5.19
3680 4052 0.962489 AGTTCCACTGACTCTGGTCG 59.038 55.000 0.00 0.00 44.83 4.79
3683 4055 1.337260 CCGAAGTTCCACTGACTCTGG 60.337 57.143 0.00 0.00 0.00 3.86
3694 4066 2.434359 CGCCACCTCCGAAGTTCC 60.434 66.667 0.00 0.00 0.00 3.62
3778 4150 2.199652 CCACCAACAACCACGCCAT 61.200 57.895 0.00 0.00 0.00 4.40
3799 4171 1.607801 CTGATGAGTGCCACTCCGGA 61.608 60.000 21.57 2.93 44.44 5.14
3882 4255 3.055819 ACCACGTCAGAGCATGATAAACT 60.056 43.478 0.00 0.00 40.92 2.66
3953 4326 2.365941 TGACCCGACTACAAATGTGTGA 59.634 45.455 0.00 0.00 38.82 3.58
3954 4327 2.761559 TGACCCGACTACAAATGTGTG 58.238 47.619 0.00 0.00 38.82 3.82
3955 4328 3.007506 TGATGACCCGACTACAAATGTGT 59.992 43.478 0.00 0.00 42.09 3.72
3968 4341 2.076863 GGAGTCAACTTTGATGACCCG 58.923 52.381 3.23 0.00 46.60 5.28
3971 4344 5.499139 TTTGTGGAGTCAACTTTGATGAC 57.501 39.130 0.00 0.00 45.94 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.