Multiple sequence alignment - TraesCS7A01G278800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G278800 chr7A 100.000 4974 0 0 1 4974 295095979 295100952 0.000000e+00 9186.0
1 TraesCS7A01G278800 chr7A 79.498 239 32 11 3744 3965 27288846 27288608 2.400000e-33 154.0
2 TraesCS7A01G278800 chr7A 90.909 55 5 0 705 759 214312952 214312898 1.920000e-09 75.0
3 TraesCS7A01G278800 chr7A 100.000 28 0 0 1129 1156 640576700 640576727 9.000000e-03 52.8
4 TraesCS7A01G278800 chr7B 93.553 3490 135 44 758 4220 272756003 272752577 0.000000e+00 5116.0
5 TraesCS7A01G278800 chr7B 91.535 508 40 3 121 627 272777013 272776508 0.000000e+00 697.0
6 TraesCS7A01G278800 chr7B 85.490 255 25 10 205 451 76915639 76915389 6.390000e-64 255.0
7 TraesCS7A01G278800 chr7B 85.227 88 13 0 632 719 272756093 272756006 1.910000e-14 91.6
8 TraesCS7A01G278800 chr7D 92.995 2427 91 37 1815 4220 268833955 268836323 0.000000e+00 3467.0
9 TraesCS7A01G278800 chr7D 95.106 1083 40 6 755 1832 268832292 268833366 0.000000e+00 1694.0
10 TraesCS7A01G278800 chr7D 84.110 365 37 6 359 723 268831953 268832296 2.870000e-87 333.0
11 TraesCS7A01G278800 chr7D 78.589 411 64 18 3048 3445 27094344 27093945 2.970000e-62 250.0
12 TraesCS7A01G278800 chr7D 75.914 465 85 19 3048 3499 27047923 27047473 3.900000e-51 213.0
13 TraesCS7A01G278800 chr7D 76.108 406 84 11 3047 3445 26819054 26818655 3.040000e-47 200.0
14 TraesCS7A01G278800 chr7D 78.992 238 34 9 3744 3965 27093807 27093570 1.120000e-31 148.0
15 TraesCS7A01G278800 chr7D 78.481 237 34 10 3744 3964 27047352 27047117 6.710000e-29 139.0
16 TraesCS7A01G278800 chr7D 95.000 80 4 0 228 307 268831211 268831290 5.230000e-25 126.0
17 TraesCS7A01G278800 chr7D 89.362 94 9 1 3352 3445 26791564 26791472 3.150000e-22 117.0
18 TraesCS7A01G278800 chr7D 88.043 92 10 1 3874 3965 26833686 26833596 1.890000e-19 108.0
19 TraesCS7A01G278800 chr7D 92.157 51 4 0 714 764 523128766 523128816 6.910000e-09 73.1
20 TraesCS7A01G278800 chr7D 100.000 28 0 0 1129 1156 553818901 553818874 9.000000e-03 52.8
21 TraesCS7A01G278800 chr4B 76.726 623 90 24 4231 4818 524133998 524133396 3.760000e-76 296.0
22 TraesCS7A01G278800 chr4B 92.157 51 3 1 709 759 585960618 585960667 2.480000e-08 71.3
23 TraesCS7A01G278800 chr4A 81.053 285 45 9 2235 2512 704647040 704646758 8.380000e-53 219.0
24 TraesCS7A01G278800 chr4A 76.341 410 74 18 3048 3445 704645643 704645245 1.090000e-46 198.0
25 TraesCS7A01G278800 chr4A 78.571 238 31 9 3746 3965 704629039 704628804 6.710000e-29 139.0
26 TraesCS7A01G278800 chr4A 78.333 240 31 11 3744 3965 704645112 704644876 8.690000e-28 135.0
27 TraesCS7A01G278800 chr4A 92.391 92 6 1 3354 3445 704578326 704578236 4.040000e-26 130.0
28 TraesCS7A01G278800 chr4A 92.391 92 6 1 3354 3445 704598191 704598101 4.040000e-26 130.0
29 TraesCS7A01G278800 chr4A 97.826 46 1 0 714 759 601527896 601527941 4.130000e-11 80.5
30 TraesCS7A01G278800 chr4A 97.826 46 1 0 714 759 601557135 601557180 4.130000e-11 80.5
31 TraesCS7A01G278800 chr3D 90.000 120 12 0 4 123 239888587 239888468 6.670000e-34 156.0
32 TraesCS7A01G278800 chr3D 81.065 169 24 4 4320 4488 113472245 113472085 1.450000e-25 128.0
33 TraesCS7A01G278800 chr2A 81.143 175 32 1 4509 4682 433368760 433368586 6.710000e-29 139.0
34 TraesCS7A01G278800 chr4D 81.250 176 28 5 4509 4682 340025751 340025579 2.410000e-28 137.0
35 TraesCS7A01G278800 chr4D 85.882 85 12 0 4718 4802 427946721 427946637 1.910000e-14 91.6
36 TraesCS7A01G278800 chr1D 84.553 123 17 2 2 123 183032666 183032545 2.430000e-23 121.0
37 TraesCS7A01G278800 chr3B 82.143 112 17 3 4542 4651 659500854 659500964 5.300000e-15 93.5
38 TraesCS7A01G278800 chr3B 95.833 48 2 0 712 759 56067779 56067732 1.480000e-10 78.7
39 TraesCS7A01G278800 chr6A 92.453 53 3 1 708 759 12423684 12423632 1.920000e-09 75.0
40 TraesCS7A01G278800 chr2B 93.878 49 2 1 712 759 158382414 158382462 6.910000e-09 73.1
41 TraesCS7A01G278800 chr5B 97.436 39 1 0 721 759 681954611 681954573 3.210000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G278800 chr7A 295095979 295100952 4973 False 9186.0 9186 100.00000 1 4974 1 chr7A.!!$F1 4973
1 TraesCS7A01G278800 chr7B 272752577 272756093 3516 True 2603.8 5116 89.39000 632 4220 2 chr7B.!!$R3 3588
2 TraesCS7A01G278800 chr7B 272776508 272777013 505 True 697.0 697 91.53500 121 627 1 chr7B.!!$R2 506
3 TraesCS7A01G278800 chr7D 268831211 268836323 5112 False 1405.0 3467 91.80275 228 4220 4 chr7D.!!$F2 3992
4 TraesCS7A01G278800 chr4B 524133396 524133998 602 True 296.0 296 76.72600 4231 4818 1 chr4B.!!$R1 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.036388 TGGACGGCTCCAATGTTCTC 60.036 55.0 3.59 0.00 44.26 2.87 F
102 103 0.176680 GCTCCAGGTGATCACGTCAT 59.823 55.0 17.83 2.07 39.48 3.06 F
1758 2379 0.253044 ATACAACCGCAGCAGGTGAT 59.747 50.0 0.00 0.02 45.21 3.06 F
3673 4904 0.105964 TGCTGTCTACACACACACCC 59.894 55.0 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1077 1695 0.397254 ACGATCCTGTCCGATTCCCT 60.397 55.000 0.00 0.0 0.00 4.20 R
1767 2388 2.423577 AGTACGCTTCATTGTTCCACC 58.576 47.619 0.00 0.0 0.00 4.61 R
3741 4976 0.029834 CGCACAGCTGAAGCAAAAGT 59.970 50.000 23.35 0.0 45.16 2.66 R
4603 5867 0.040958 GTTGATCGAATGATGGCGGC 60.041 55.000 0.00 0.0 34.09 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.713946 TGGACGGCTCCAATGTTC 57.286 55.556 3.59 0.00 44.26 3.18
18 19 2.066340 TGGACGGCTCCAATGTTCT 58.934 52.632 3.59 0.00 44.26 3.01
19 20 0.036388 TGGACGGCTCCAATGTTCTC 60.036 55.000 3.59 0.00 44.26 2.87
20 21 0.250513 GGACGGCTCCAATGTTCTCT 59.749 55.000 0.00 0.00 36.42 3.10
21 22 1.480954 GGACGGCTCCAATGTTCTCTA 59.519 52.381 0.00 0.00 36.42 2.43
22 23 2.103263 GGACGGCTCCAATGTTCTCTAT 59.897 50.000 0.00 0.00 36.42 1.98
23 24 3.432326 GGACGGCTCCAATGTTCTCTATT 60.432 47.826 0.00 0.00 36.42 1.73
24 25 3.798202 ACGGCTCCAATGTTCTCTATTC 58.202 45.455 0.00 0.00 0.00 1.75
25 26 3.452627 ACGGCTCCAATGTTCTCTATTCT 59.547 43.478 0.00 0.00 0.00 2.40
26 27 4.080863 ACGGCTCCAATGTTCTCTATTCTT 60.081 41.667 0.00 0.00 0.00 2.52
27 28 4.509600 CGGCTCCAATGTTCTCTATTCTTC 59.490 45.833 0.00 0.00 0.00 2.87
28 29 4.819088 GGCTCCAATGTTCTCTATTCTTCC 59.181 45.833 0.00 0.00 0.00 3.46
29 30 4.819088 GCTCCAATGTTCTCTATTCTTCCC 59.181 45.833 0.00 0.00 0.00 3.97
30 31 5.023533 TCCAATGTTCTCTATTCTTCCCG 57.976 43.478 0.00 0.00 0.00 5.14
31 32 3.561725 CCAATGTTCTCTATTCTTCCCGC 59.438 47.826 0.00 0.00 0.00 6.13
32 33 4.191544 CAATGTTCTCTATTCTTCCCGCA 58.808 43.478 0.00 0.00 0.00 5.69
33 34 3.973206 TGTTCTCTATTCTTCCCGCAA 57.027 42.857 0.00 0.00 0.00 4.85
34 35 4.280436 TGTTCTCTATTCTTCCCGCAAA 57.720 40.909 0.00 0.00 0.00 3.68
35 36 4.253685 TGTTCTCTATTCTTCCCGCAAAG 58.746 43.478 0.00 0.00 0.00 2.77
36 37 4.254492 GTTCTCTATTCTTCCCGCAAAGT 58.746 43.478 0.00 0.00 0.00 2.66
37 38 3.861840 TCTCTATTCTTCCCGCAAAGTG 58.138 45.455 0.00 0.00 0.00 3.16
38 39 3.513912 TCTCTATTCTTCCCGCAAAGTGA 59.486 43.478 0.00 0.00 0.00 3.41
39 40 3.861840 TCTATTCTTCCCGCAAAGTGAG 58.138 45.455 0.00 0.00 0.00 3.51
40 41 1.168714 ATTCTTCCCGCAAAGTGAGC 58.831 50.000 0.00 0.00 0.00 4.26
41 42 0.179032 TTCTTCCCGCAAAGTGAGCA 60.179 50.000 0.00 0.00 0.00 4.26
42 43 0.884704 TCTTCCCGCAAAGTGAGCAC 60.885 55.000 0.00 0.00 0.00 4.40
43 44 2.175184 CTTCCCGCAAAGTGAGCACG 62.175 60.000 0.00 0.00 36.20 5.34
44 45 2.652382 TTCCCGCAAAGTGAGCACGA 62.652 55.000 0.00 0.00 36.20 4.35
45 46 2.034879 CCCGCAAAGTGAGCACGAT 61.035 57.895 0.00 0.00 36.20 3.73
46 47 0.739462 CCCGCAAAGTGAGCACGATA 60.739 55.000 0.00 0.00 36.20 2.92
47 48 0.370273 CCGCAAAGTGAGCACGATAC 59.630 55.000 0.00 0.00 36.20 2.24
48 49 1.067693 CGCAAAGTGAGCACGATACA 58.932 50.000 0.00 0.00 36.20 2.29
49 50 1.201812 CGCAAAGTGAGCACGATACAC 60.202 52.381 0.00 0.00 36.20 2.90
50 51 1.128692 GCAAAGTGAGCACGATACACC 59.871 52.381 0.00 0.00 35.47 4.16
51 52 1.390123 CAAAGTGAGCACGATACACCG 59.610 52.381 0.00 0.00 35.47 4.94
52 53 0.885879 AAGTGAGCACGATACACCGA 59.114 50.000 0.00 0.00 35.47 4.69
53 54 1.103803 AGTGAGCACGATACACCGAT 58.896 50.000 0.00 0.00 35.47 4.18
54 55 1.065701 AGTGAGCACGATACACCGATC 59.934 52.381 0.00 0.00 35.47 3.69
59 60 3.450152 CGATACACCGATCGCGCG 61.450 66.667 26.76 26.76 41.98 6.86
67 68 2.840016 CGATCGCGCGGAGAATTC 59.160 61.111 31.69 15.38 0.00 2.17
68 69 1.658717 CGATCGCGCGGAGAATTCT 60.659 57.895 31.69 7.95 0.00 2.40
69 70 1.601147 CGATCGCGCGGAGAATTCTC 61.601 60.000 31.69 24.68 42.14 2.87
79 80 2.217429 GAGAATTCTCCCGTGCTCTC 57.783 55.000 22.68 0.00 37.02 3.20
80 81 0.827368 AGAATTCTCCCGTGCTCTCC 59.173 55.000 0.88 0.00 0.00 3.71
81 82 0.179070 GAATTCTCCCGTGCTCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
82 83 0.909610 AATTCTCCCGTGCTCTCCCA 60.910 55.000 0.00 0.00 0.00 4.37
83 84 1.333636 ATTCTCCCGTGCTCTCCCAG 61.334 60.000 0.00 0.00 0.00 4.45
91 92 2.686835 GCTCTCCCAGCTCCAGGT 60.687 66.667 0.00 0.00 45.83 4.00
92 93 3.028921 GCTCTCCCAGCTCCAGGTG 62.029 68.421 0.00 0.00 45.83 4.00
93 94 1.305633 CTCTCCCAGCTCCAGGTGA 60.306 63.158 7.36 0.00 45.66 4.02
94 95 0.690411 CTCTCCCAGCTCCAGGTGAT 60.690 60.000 7.36 0.00 45.66 3.06
95 96 0.689080 TCTCCCAGCTCCAGGTGATC 60.689 60.000 7.36 0.00 45.66 2.92
96 97 0.979709 CTCCCAGCTCCAGGTGATCA 60.980 60.000 7.36 0.00 45.66 2.92
97 98 1.222936 CCCAGCTCCAGGTGATCAC 59.777 63.158 17.91 17.91 45.66 3.06
98 99 1.153489 CCAGCTCCAGGTGATCACG 60.153 63.158 19.33 6.76 45.66 4.35
99 100 1.593787 CAGCTCCAGGTGATCACGT 59.406 57.895 19.33 17.25 45.66 4.49
100 101 0.459237 CAGCTCCAGGTGATCACGTC 60.459 60.000 17.83 6.05 45.66 4.34
101 102 0.900182 AGCTCCAGGTGATCACGTCA 60.900 55.000 17.83 7.23 0.00 4.35
102 103 0.176680 GCTCCAGGTGATCACGTCAT 59.823 55.000 17.83 2.07 39.48 3.06
103 104 1.804372 GCTCCAGGTGATCACGTCATC 60.804 57.143 17.83 4.57 39.48 2.92
104 105 0.824109 TCCAGGTGATCACGTCATCC 59.176 55.000 17.83 3.85 38.83 3.51
105 106 0.536724 CCAGGTGATCACGTCATCCA 59.463 55.000 17.83 0.00 38.83 3.41
106 107 1.139654 CCAGGTGATCACGTCATCCAT 59.860 52.381 17.83 0.00 38.83 3.41
107 108 2.207590 CAGGTGATCACGTCATCCATG 58.792 52.381 17.83 2.06 38.83 3.66
108 109 0.940126 GGTGATCACGTCATCCATGC 59.060 55.000 19.33 0.00 39.48 4.06
109 110 0.940126 GTGATCACGTCATCCATGCC 59.060 55.000 10.69 0.00 39.48 4.40
110 111 0.832626 TGATCACGTCATCCATGCCT 59.167 50.000 0.00 0.00 0.00 4.75
111 112 1.210234 TGATCACGTCATCCATGCCTT 59.790 47.619 0.00 0.00 0.00 4.35
112 113 1.600957 GATCACGTCATCCATGCCTTG 59.399 52.381 0.00 0.00 0.00 3.61
113 114 1.026182 TCACGTCATCCATGCCTTGC 61.026 55.000 0.00 0.00 0.00 4.01
114 115 1.750399 ACGTCATCCATGCCTTGCC 60.750 57.895 0.00 0.00 0.00 4.52
115 116 2.827051 CGTCATCCATGCCTTGCCG 61.827 63.158 0.00 0.00 0.00 5.69
116 117 2.829914 TCATCCATGCCTTGCCGC 60.830 61.111 0.00 0.00 0.00 6.53
117 118 3.142162 CATCCATGCCTTGCCGCA 61.142 61.111 0.00 0.00 44.35 5.69
118 119 2.831742 ATCCATGCCTTGCCGCAG 60.832 61.111 0.00 0.00 43.26 5.18
121 122 4.189188 CATGCCTTGCCGCAGCTC 62.189 66.667 6.21 0.00 43.26 4.09
122 123 4.728110 ATGCCTTGCCGCAGCTCA 62.728 61.111 6.21 0.50 43.26 4.26
171 172 6.540189 ACAACAAGCCTAGCAGTATTATTCTG 59.460 38.462 0.00 0.00 36.18 3.02
207 208 9.772973 TTAAAGATCGTAATATGTTATGGCACT 57.227 29.630 0.00 0.00 0.00 4.40
208 209 7.891183 AAGATCGTAATATGTTATGGCACTC 57.109 36.000 0.00 0.00 0.00 3.51
226 227 7.402054 TGGCACTCCGAATTAATATATCCAAT 58.598 34.615 0.00 0.00 34.14 3.16
289 290 7.118496 ACATACCCAAAGAAAAACATCAACA 57.882 32.000 0.00 0.00 0.00 3.33
411 1023 3.876274 TCAGATAGAAGTGCACTGGTC 57.124 47.619 22.49 15.47 0.00 4.02
426 1038 4.320494 GCACTGGTCTTGTTGATAACCTTG 60.320 45.833 0.00 0.00 32.82 3.61
439 1051 9.952030 TGTTGATAACCTTGATGTACTTCATAA 57.048 29.630 11.84 0.00 36.83 1.90
489 1101 2.536761 TGGTGTTTCTTGTAGGACGG 57.463 50.000 0.00 0.00 0.00 4.79
494 1106 1.001633 GTTTCTTGTAGGACGGGAGCA 59.998 52.381 0.00 0.00 0.00 4.26
506 1118 2.937149 GACGGGAGCAAAATAGAAGGAC 59.063 50.000 0.00 0.00 0.00 3.85
513 1125 6.377146 GGGAGCAAAATAGAAGGACAAACATA 59.623 38.462 0.00 0.00 0.00 2.29
514 1126 7.415653 GGGAGCAAAATAGAAGGACAAACATAG 60.416 40.741 0.00 0.00 0.00 2.23
580 1192 9.783256 GTTTTTCTTGTGTTGTTACTTGTCTAT 57.217 29.630 0.00 0.00 0.00 1.98
639 1251 1.544691 AGAACAGTTACGCGACTCCAT 59.455 47.619 15.93 0.00 0.00 3.41
677 1289 4.275936 GGCTTCGATTTACAGTGGCATTAT 59.724 41.667 0.00 0.00 0.00 1.28
681 1293 7.307989 GCTTCGATTTACAGTGGCATTATACAT 60.308 37.037 0.00 0.00 0.00 2.29
682 1294 7.420184 TCGATTTACAGTGGCATTATACATG 57.580 36.000 0.00 0.00 0.00 3.21
683 1295 7.213678 TCGATTTACAGTGGCATTATACATGA 58.786 34.615 0.00 0.00 0.00 3.07
703 1315 5.570234 TGAATACCAAATTTTACCCGAGC 57.430 39.130 0.00 0.00 0.00 5.03
705 1317 2.296073 ACCAAATTTTACCCGAGCCA 57.704 45.000 0.00 0.00 0.00 4.75
709 1321 3.993736 CCAAATTTTACCCGAGCCAAAAG 59.006 43.478 0.00 0.00 0.00 2.27
710 1322 4.502431 CCAAATTTTACCCGAGCCAAAAGT 60.502 41.667 0.00 0.00 0.00 2.66
711 1323 4.948341 AATTTTACCCGAGCCAAAAGTT 57.052 36.364 0.00 0.00 0.00 2.66
718 1330 7.706100 TTACCCGAGCCAAAAGTTTTATTAT 57.294 32.000 0.00 0.00 0.00 1.28
719 1331 8.804912 TTACCCGAGCCAAAAGTTTTATTATA 57.195 30.769 0.00 0.00 0.00 0.98
720 1332 7.891498 ACCCGAGCCAAAAGTTTTATTATAT 57.109 32.000 0.00 0.00 0.00 0.86
721 1333 8.983702 ACCCGAGCCAAAAGTTTTATTATATA 57.016 30.769 0.00 0.00 0.00 0.86
722 1334 8.843262 ACCCGAGCCAAAAGTTTTATTATATAC 58.157 33.333 0.00 0.00 0.00 1.47
723 1335 9.063615 CCCGAGCCAAAAGTTTTATTATATACT 57.936 33.333 0.00 0.00 0.00 2.12
745 1357 7.937700 ACTCCCTCCATTCTAAAATAGATGA 57.062 36.000 0.00 0.00 34.22 2.92
746 1358 7.740805 ACTCCCTCCATTCTAAAATAGATGAC 58.259 38.462 0.00 0.00 34.22 3.06
747 1359 7.570607 ACTCCCTCCATTCTAAAATAGATGACT 59.429 37.037 0.00 0.00 34.22 3.41
748 1360 7.967908 TCCCTCCATTCTAAAATAGATGACTC 58.032 38.462 0.00 0.00 34.22 3.36
749 1361 7.568738 TCCCTCCATTCTAAAATAGATGACTCA 59.431 37.037 0.00 0.00 34.22 3.41
750 1362 8.213679 CCCTCCATTCTAAAATAGATGACTCAA 58.786 37.037 0.00 0.00 34.22 3.02
751 1363 9.050601 CCTCCATTCTAAAATAGATGACTCAAC 57.949 37.037 0.00 0.00 34.22 3.18
752 1364 9.829507 CTCCATTCTAAAATAGATGACTCAACT 57.170 33.333 0.00 0.00 34.22 3.16
776 1388 9.651913 ACTTTGTACACAAACAGATTTTCAAAT 57.348 25.926 3.44 0.00 40.55 2.32
794 1406 1.961133 ATCTTAACGGGGTTCCCTCA 58.039 50.000 7.87 0.00 42.67 3.86
819 1432 1.668151 GTGCACAAGTCCCTCCGTC 60.668 63.158 13.17 0.00 0.00 4.79
841 1454 1.665679 CTTCGTTGCGCAGGTATCATT 59.334 47.619 11.31 0.00 0.00 2.57
842 1455 1.732941 TCGTTGCGCAGGTATCATTT 58.267 45.000 11.31 0.00 0.00 2.32
862 1476 3.906720 TTGTTGCTACCCTCACTATCC 57.093 47.619 0.00 0.00 0.00 2.59
897 1511 7.095857 ACGTAATAATAAACGGACAAACGAACA 60.096 33.333 0.00 0.00 43.25 3.18
898 1512 7.899330 CGTAATAATAAACGGACAAACGAACAT 59.101 33.333 0.00 0.00 35.51 2.71
958 1572 0.896019 CACTCCACTCGTCCACTCCT 60.896 60.000 0.00 0.00 0.00 3.69
964 1582 1.664659 CACTCGTCCACTCCTACTACG 59.335 57.143 0.00 0.00 34.99 3.51
988 1606 2.997315 TCACTCCCACTCCCGCAG 60.997 66.667 0.00 0.00 0.00 5.18
1077 1695 4.266070 GCTCGCGCTACCATCCGA 62.266 66.667 5.56 0.00 0.00 4.55
1151 1769 4.394712 CGCCACCACCTCCACCTC 62.395 72.222 0.00 0.00 0.00 3.85
1152 1770 4.035102 GCCACCACCTCCACCTCC 62.035 72.222 0.00 0.00 0.00 4.30
1153 1771 2.529136 CCACCACCTCCACCTCCA 60.529 66.667 0.00 0.00 0.00 3.86
1154 1772 2.750350 CACCACCTCCACCTCCAC 59.250 66.667 0.00 0.00 0.00 4.02
1297 1915 3.547613 CGTCTTCGTCCTAGGGTAATTCG 60.548 52.174 9.46 5.18 0.00 3.34
1462 2083 6.808008 ATGTGCTAGCCAATTATGTATGTC 57.192 37.500 13.29 0.00 0.00 3.06
1553 2174 1.735571 GCTTTTACTTTCGCCATCCGA 59.264 47.619 0.00 0.00 45.77 4.55
1571 2192 4.078537 TCCGAATGTGTGAATTCCATTGT 58.921 39.130 11.64 0.00 33.74 2.71
1589 2210 3.912496 TGTCTTGTGCATATGCCTAGT 57.088 42.857 24.54 0.00 41.18 2.57
1608 2229 6.127814 GCCTAGTAATTTCAGGTGGGTTTTAC 60.128 42.308 0.00 0.00 0.00 2.01
1753 2374 1.396996 GGTACAATACAACCGCAGCAG 59.603 52.381 0.00 0.00 0.00 4.24
1758 2379 0.253044 ATACAACCGCAGCAGGTGAT 59.747 50.000 0.00 0.02 45.21 3.06
1767 2388 2.998670 CGCAGCAGGTGATATATCAAGG 59.001 50.000 16.97 10.36 38.75 3.61
1834 3060 3.754965 AGCAACCATTGTGTGTATCTGT 58.245 40.909 0.00 0.00 0.00 3.41
1932 3158 7.852971 ACAATAAGGCGTACTTAGCAAAATA 57.147 32.000 7.57 0.00 44.43 1.40
1933 3159 7.691158 ACAATAAGGCGTACTTAGCAAAATAC 58.309 34.615 7.57 0.00 44.43 1.89
2131 3357 9.626045 GAGTTTGAAGGGTATGTTATTTCTTTG 57.374 33.333 0.00 0.00 0.00 2.77
2213 3439 4.390297 AGCGCTAATGTTTTCTTCTGACTC 59.610 41.667 8.99 0.00 0.00 3.36
2477 3705 2.239907 GCCAAAGGTTCTAGAGATGGGT 59.760 50.000 11.10 0.00 0.00 4.51
2709 3937 5.458041 TTTGCTCCCTTCTTTGAAATGAG 57.542 39.130 0.00 0.00 0.00 2.90
2724 3952 5.137551 TGAAATGAGTGATGCATGATGGAT 58.862 37.500 2.46 0.00 0.00 3.41
2875 4103 4.761975 CATACCTTCCGTAGCCTTACAAA 58.238 43.478 0.00 0.00 0.00 2.83
3040 4268 2.803451 TGTGCCTTTTGCGTAACTTTG 58.197 42.857 0.00 0.00 45.60 2.77
3041 4269 2.164624 TGTGCCTTTTGCGTAACTTTGT 59.835 40.909 0.00 0.00 45.60 2.83
3121 4351 2.934886 AAATTGCCAACAAGCCATGT 57.065 40.000 0.00 0.00 46.82 3.21
3125 4355 0.958091 TGCCAACAAGCCATGTACAC 59.042 50.000 0.00 0.00 42.99 2.90
3189 4419 6.554605 ACCATTTCCATTATTGATTACAGGGG 59.445 38.462 0.00 0.00 0.00 4.79
3219 4449 1.353694 AGTCCTGCAAAGCTTCCATCT 59.646 47.619 0.00 0.00 0.00 2.90
3249 4479 3.511477 AGAGATATGGGCATACGAGGTT 58.489 45.455 0.00 0.00 0.00 3.50
3253 4483 6.213600 AGAGATATGGGCATACGAGGTTTAAT 59.786 38.462 0.00 0.00 0.00 1.40
3255 4485 3.916359 TGGGCATACGAGGTTTAATCA 57.084 42.857 0.00 0.00 0.00 2.57
3284 4515 9.448438 ACTACTTGTCATTATTCACAGCATTAA 57.552 29.630 0.00 0.00 0.00 1.40
3285 4516 9.926751 CTACTTGTCATTATTCACAGCATTAAG 57.073 33.333 0.00 0.00 0.00 1.85
3304 4535 8.116136 GCATTAAGGTTATTATTTGCTGTTTGC 58.884 33.333 0.00 0.00 43.25 3.68
3342 4573 2.995283 TCCAGGATCTGATTGTTGCAG 58.005 47.619 0.00 0.00 32.44 4.41
3474 4705 6.604735 ACATCCGTAAGCAAATAGATGAAC 57.395 37.500 11.52 0.00 36.01 3.18
3498 4729 9.499479 AACATTCTACCATCAGAGCATTTATAG 57.501 33.333 0.00 0.00 0.00 1.31
3499 4730 8.874156 ACATTCTACCATCAGAGCATTTATAGA 58.126 33.333 0.00 0.00 0.00 1.98
3547 4778 9.035890 TGACCAGTAGCATTAGTATAGCATTAT 57.964 33.333 0.00 0.00 0.00 1.28
3587 4818 7.760794 TCAATGAATATTCTGCCATTCAACAAC 59.239 33.333 16.24 0.00 42.67 3.32
3644 4875 3.991069 CGTAGCAGCTAAATGTTCACAC 58.009 45.455 2.87 0.00 0.00 3.82
3645 4876 3.679980 CGTAGCAGCTAAATGTTCACACT 59.320 43.478 2.87 0.00 0.00 3.55
3647 4878 4.756084 AGCAGCTAAATGTTCACACTTC 57.244 40.909 0.00 0.00 0.00 3.01
3649 4880 3.253188 GCAGCTAAATGTTCACACTTCCA 59.747 43.478 0.00 0.00 0.00 3.53
3650 4881 4.787598 CAGCTAAATGTTCACACTTCCAC 58.212 43.478 0.00 0.00 0.00 4.02
3651 4882 4.275689 CAGCTAAATGTTCACACTTCCACA 59.724 41.667 0.00 0.00 0.00 4.17
3653 4884 4.556699 GCTAAATGTTCACACTTCCACACC 60.557 45.833 0.00 0.00 0.00 4.16
3655 4886 2.036958 TGTTCACACTTCCACACCTG 57.963 50.000 0.00 0.00 0.00 4.00
3656 4887 0.663153 GTTCACACTTCCACACCTGC 59.337 55.000 0.00 0.00 0.00 4.85
3657 4888 0.546122 TTCACACTTCCACACCTGCT 59.454 50.000 0.00 0.00 0.00 4.24
3658 4889 0.179048 TCACACTTCCACACCTGCTG 60.179 55.000 0.00 0.00 0.00 4.41
3659 4890 0.464373 CACACTTCCACACCTGCTGT 60.464 55.000 0.00 0.00 0.00 4.40
3660 4891 0.179045 ACACTTCCACACCTGCTGTC 60.179 55.000 0.00 0.00 0.00 3.51
3661 4892 0.107456 CACTTCCACACCTGCTGTCT 59.893 55.000 0.00 0.00 0.00 3.41
3662 4893 1.344438 CACTTCCACACCTGCTGTCTA 59.656 52.381 0.00 0.00 0.00 2.59
3663 4894 1.344763 ACTTCCACACCTGCTGTCTAC 59.655 52.381 0.00 0.00 0.00 2.59
3664 4895 1.344438 CTTCCACACCTGCTGTCTACA 59.656 52.381 0.00 0.00 0.00 2.74
3665 4896 0.679505 TCCACACCTGCTGTCTACAC 59.320 55.000 0.00 0.00 0.00 2.90
3666 4897 0.392706 CCACACCTGCTGTCTACACA 59.607 55.000 0.00 0.00 0.00 3.72
3667 4898 1.502231 CACACCTGCTGTCTACACAC 58.498 55.000 0.00 0.00 0.00 3.82
3668 4899 1.119684 ACACCTGCTGTCTACACACA 58.880 50.000 0.00 0.00 0.00 3.72
3669 4900 1.202533 ACACCTGCTGTCTACACACAC 60.203 52.381 0.00 0.00 0.00 3.82
3670 4901 1.119684 ACCTGCTGTCTACACACACA 58.880 50.000 0.00 0.00 0.00 3.72
3671 4902 1.202533 ACCTGCTGTCTACACACACAC 60.203 52.381 0.00 0.00 0.00 3.82
3672 4903 1.502231 CTGCTGTCTACACACACACC 58.498 55.000 0.00 0.00 0.00 4.16
3673 4904 0.105964 TGCTGTCTACACACACACCC 59.894 55.000 0.00 0.00 0.00 4.61
3674 4905 0.393077 GCTGTCTACACACACACCCT 59.607 55.000 0.00 0.00 0.00 4.34
3675 4906 1.616865 GCTGTCTACACACACACCCTA 59.383 52.381 0.00 0.00 0.00 3.53
3676 4907 2.036733 GCTGTCTACACACACACCCTAA 59.963 50.000 0.00 0.00 0.00 2.69
3677 4908 3.861131 GCTGTCTACACACACACCCTAAG 60.861 52.174 0.00 0.00 0.00 2.18
3680 4911 4.406326 TGTCTACACACACACCCTAAGAAA 59.594 41.667 0.00 0.00 0.00 2.52
3682 4913 5.465724 GTCTACACACACACCCTAAGAAAAG 59.534 44.000 0.00 0.00 0.00 2.27
3685 4916 3.569701 CACACACACCCTAAGAAAAGCAT 59.430 43.478 0.00 0.00 0.00 3.79
3701 4932 7.492524 AGAAAAGCATCTCGTTGATACTATCA 58.507 34.615 0.00 0.00 37.55 2.15
3863 5098 5.165961 TGCTAAGCTTTCTCCACATAACT 57.834 39.130 3.20 0.00 0.00 2.24
3869 5104 4.999950 AGCTTTCTCCACATAACTTCTGTG 59.000 41.667 1.19 1.19 42.88 3.66
3873 5120 6.665992 TTCTCCACATAACTTCTGTGTACT 57.334 37.500 6.56 0.00 41.93 2.73
3928 5175 1.624813 ACGGGGGTAAAGATGTTCGAA 59.375 47.619 0.00 0.00 0.00 3.71
3983 5230 0.694771 TGCTGCTTGAGAATCCCTGT 59.305 50.000 0.00 0.00 0.00 4.00
3988 5235 2.289882 TGCTTGAGAATCCCTGTCACTG 60.290 50.000 0.00 0.00 0.00 3.66
4000 5247 3.181461 CCCTGTCACTGTCTTTTCTCAGT 60.181 47.826 0.00 0.00 44.32 3.41
4001 5248 4.039245 CCCTGTCACTGTCTTTTCTCAGTA 59.961 45.833 0.00 0.00 42.05 2.74
4002 5249 5.453339 CCCTGTCACTGTCTTTTCTCAGTAA 60.453 44.000 0.00 0.00 42.05 2.24
4003 5250 6.049149 CCTGTCACTGTCTTTTCTCAGTAAA 58.951 40.000 0.00 0.00 42.05 2.01
4004 5251 6.708054 CCTGTCACTGTCTTTTCTCAGTAAAT 59.292 38.462 0.00 0.00 42.05 1.40
4005 5252 7.872993 CCTGTCACTGTCTTTTCTCAGTAAATA 59.127 37.037 0.00 0.00 42.05 1.40
4006 5253 9.261180 CTGTCACTGTCTTTTCTCAGTAAATAA 57.739 33.333 0.00 0.00 42.05 1.40
4007 5254 9.042008 TGTCACTGTCTTTTCTCAGTAAATAAC 57.958 33.333 0.00 0.00 42.05 1.89
4070 5318 9.916360 TGTAGTAGATCACATTCTTTACTAGGA 57.084 33.333 0.00 0.00 0.00 2.94
4083 5331 8.871629 TTCTTTACTAGGAAAAATGGTGCATA 57.128 30.769 0.87 0.00 0.00 3.14
4090 5338 8.934697 ACTAGGAAAAATGGTGCATACTAGATA 58.065 33.333 7.36 0.00 32.11 1.98
4091 5339 9.950496 CTAGGAAAAATGGTGCATACTAGATAT 57.050 33.333 0.00 0.00 0.00 1.63
4092 5340 8.627208 AGGAAAAATGGTGCATACTAGATATG 57.373 34.615 0.00 2.50 43.29 1.78
4146 5395 4.677584 ACAGCGTCTTTGCTATCTAAGAG 58.322 43.478 0.00 0.00 45.23 2.85
4156 5405 8.194104 TCTTTGCTATCTAAGAGACACTGAATC 58.806 37.037 0.00 0.00 31.98 2.52
4173 5422 3.513912 TGAATCTGAGGCCGTAGAAAAGA 59.486 43.478 14.67 4.23 0.00 2.52
4177 5426 3.056749 TCTGAGGCCGTAGAAAAGAGAAC 60.057 47.826 9.24 0.00 0.00 3.01
4179 5428 3.254892 GAGGCCGTAGAAAAGAGAACTG 58.745 50.000 0.00 0.00 0.00 3.16
4191 5440 7.935520 AGAAAAGAGAACTGAAATCCAGAAAC 58.064 34.615 0.00 0.00 45.78 2.78
4194 5443 4.040461 AGAGAACTGAAATCCAGAAACGGA 59.960 41.667 0.00 0.00 45.78 4.69
4220 5472 4.274950 TCTTGTTTCTTTCACGGGATGTTC 59.725 41.667 0.00 0.00 0.00 3.18
4221 5473 3.546724 TGTTTCTTTCACGGGATGTTCA 58.453 40.909 0.00 0.00 0.00 3.18
4222 5474 3.314080 TGTTTCTTTCACGGGATGTTCAC 59.686 43.478 0.00 0.00 0.00 3.18
4223 5475 2.920724 TCTTTCACGGGATGTTCACA 57.079 45.000 0.00 0.00 0.00 3.58
4224 5476 2.489971 TCTTTCACGGGATGTTCACAC 58.510 47.619 0.00 0.00 0.00 3.82
4225 5477 2.104111 TCTTTCACGGGATGTTCACACT 59.896 45.455 0.00 0.00 0.00 3.55
4226 5478 1.877637 TTCACGGGATGTTCACACTG 58.122 50.000 0.00 0.00 0.00 3.66
4227 5479 1.044611 TCACGGGATGTTCACACTGA 58.955 50.000 0.00 0.00 0.00 3.41
4228 5480 1.148310 CACGGGATGTTCACACTGAC 58.852 55.000 0.00 0.00 0.00 3.51
4229 5481 0.319555 ACGGGATGTTCACACTGACG 60.320 55.000 0.00 0.00 0.00 4.35
4244 5496 0.233590 TGACGCCGAACATCAAAACG 59.766 50.000 0.00 0.00 0.00 3.60
4250 5502 1.609580 CCGAACATCAAAACGGGAGGA 60.610 52.381 0.00 0.00 41.41 3.71
4262 5514 3.171348 GGAGGACCCAACCAAGCT 58.829 61.111 0.00 0.00 34.14 3.74
4264 5516 1.456287 GAGGACCCAACCAAGCTGT 59.544 57.895 0.00 0.00 0.00 4.40
4272 5524 1.101049 CAACCAAGCTGTCCAACGGT 61.101 55.000 0.00 0.00 0.00 4.83
4273 5525 1.101049 AACCAAGCTGTCCAACGGTG 61.101 55.000 0.00 0.00 0.00 4.94
4275 5527 2.113139 AAGCTGTCCAACGGTGGG 59.887 61.111 21.90 4.47 46.01 4.61
4276 5528 2.752807 AAGCTGTCCAACGGTGGGT 61.753 57.895 21.90 0.00 46.01 4.51
4277 5529 2.668550 GCTGTCCAACGGTGGGTC 60.669 66.667 21.90 13.96 46.01 4.46
4278 5530 2.357034 CTGTCCAACGGTGGGTCG 60.357 66.667 21.90 3.86 46.01 4.79
4279 5531 3.155861 TGTCCAACGGTGGGTCGT 61.156 61.111 21.90 0.00 46.01 4.34
4297 5549 1.203994 CGTGGGTCGAGGATACAAACT 59.796 52.381 0.00 0.00 42.86 2.66
4304 5556 1.743772 CGAGGATACAAACTGGCCCAG 60.744 57.143 9.83 9.83 41.41 4.45
4314 5566 2.283604 TGGCCCAGCGTACTCTCA 60.284 61.111 0.00 0.00 0.00 3.27
4317 5569 1.153745 GCCCAGCGTACTCTCAGTG 60.154 63.158 0.00 0.00 0.00 3.66
4318 5570 1.513158 CCCAGCGTACTCTCAGTGG 59.487 63.158 0.00 0.00 0.00 4.00
4319 5571 1.251527 CCCAGCGTACTCTCAGTGGT 61.252 60.000 0.00 0.00 0.00 4.16
4320 5572 0.171455 CCAGCGTACTCTCAGTGGTC 59.829 60.000 0.00 0.00 0.00 4.02
4321 5573 1.169577 CAGCGTACTCTCAGTGGTCT 58.830 55.000 0.00 0.00 0.00 3.85
4322 5574 1.131504 CAGCGTACTCTCAGTGGTCTC 59.868 57.143 0.00 0.00 0.00 3.36
4323 5575 1.166129 GCGTACTCTCAGTGGTCTCA 58.834 55.000 0.00 0.00 0.00 3.27
4324 5576 1.131504 GCGTACTCTCAGTGGTCTCAG 59.868 57.143 0.00 0.00 0.00 3.35
4325 5577 2.428491 CGTACTCTCAGTGGTCTCAGT 58.572 52.381 0.00 0.00 0.00 3.41
4326 5578 2.160615 CGTACTCTCAGTGGTCTCAGTG 59.839 54.545 0.00 0.00 43.77 3.66
4357 5609 2.281761 CACGCTCCAAAGGCCACT 60.282 61.111 5.01 0.00 0.00 4.00
4359 5611 3.741476 CGCTCCAAAGGCCACTGC 61.741 66.667 5.01 0.00 0.00 4.40
4370 5622 1.001641 GCCACTGCCACCATCTTCT 60.002 57.895 0.00 0.00 0.00 2.85
4371 5623 1.310933 GCCACTGCCACCATCTTCTG 61.311 60.000 0.00 0.00 0.00 3.02
4401 5653 4.082190 CCTCTTCAGAACTGGTATCAACGA 60.082 45.833 1.93 0.00 0.00 3.85
4415 5676 1.265635 TCAACGAATTGACTTTGCCGG 59.734 47.619 0.00 0.00 40.01 6.13
4416 5677 0.596082 AACGAATTGACTTTGCCGGG 59.404 50.000 2.18 0.00 0.00 5.73
4417 5678 1.154035 CGAATTGACTTTGCCGGGC 60.154 57.895 13.32 13.32 0.00 6.13
4418 5679 1.215382 GAATTGACTTTGCCGGGCC 59.785 57.895 17.97 0.00 0.00 5.80
4441 5702 1.891919 GCCAAGACGCCAGACAACA 60.892 57.895 0.00 0.00 0.00 3.33
4442 5703 1.444119 GCCAAGACGCCAGACAACAA 61.444 55.000 0.00 0.00 0.00 2.83
4445 5706 1.603802 CAAGACGCCAGACAACAACAT 59.396 47.619 0.00 0.00 0.00 2.71
4448 5709 1.461127 GACGCCAGACAACAACATCTC 59.539 52.381 0.00 0.00 0.00 2.75
4456 5717 1.346395 ACAACAACATCTCCCTACGCA 59.654 47.619 0.00 0.00 0.00 5.24
4465 5726 0.668535 CTCCCTACGCATGTCGATCA 59.331 55.000 14.88 0.00 41.67 2.92
4469 5730 1.670087 CCTACGCATGTCGATCATCCC 60.670 57.143 14.88 0.00 41.67 3.85
4479 5740 0.037046 CGATCATCCCGCATCCATCA 60.037 55.000 0.00 0.00 0.00 3.07
4490 5751 1.704641 CATCCATCACCGAGACCCTA 58.295 55.000 0.00 0.00 0.00 3.53
4492 5753 0.629596 TCCATCACCGAGACCCTACT 59.370 55.000 0.00 0.00 0.00 2.57
4493 5754 0.747255 CCATCACCGAGACCCTACTG 59.253 60.000 0.00 0.00 0.00 2.74
4494 5755 1.475403 CATCACCGAGACCCTACTGT 58.525 55.000 0.00 0.00 0.00 3.55
4496 5757 0.111832 TCACCGAGACCCTACTGTGT 59.888 55.000 0.00 0.00 0.00 3.72
4499 5760 1.272536 ACCGAGACCCTACTGTGTCAT 60.273 52.381 0.00 0.00 33.89 3.06
4503 5764 0.460284 GACCCTACTGTGTCATGCCG 60.460 60.000 0.00 0.00 0.00 5.69
4504 5765 1.815421 CCCTACTGTGTCATGCCGC 60.815 63.158 0.00 0.00 0.00 6.53
4505 5766 1.219124 CCTACTGTGTCATGCCGCT 59.781 57.895 0.00 0.00 0.00 5.52
4506 5767 1.086067 CCTACTGTGTCATGCCGCTG 61.086 60.000 0.00 0.00 0.00 5.18
4510 5771 0.671472 CTGTGTCATGCCGCTGAGAA 60.671 55.000 0.00 0.00 0.00 2.87
4511 5772 0.250252 TGTGTCATGCCGCTGAGAAA 60.250 50.000 0.00 0.00 0.00 2.52
4513 5774 1.291184 TGTCATGCCGCTGAGAAACG 61.291 55.000 0.00 0.00 0.00 3.60
4514 5775 2.099062 CATGCCGCTGAGAAACGC 59.901 61.111 0.00 0.00 0.00 4.84
4522 5786 1.667830 CTGAGAAACGCCGCTCCAA 60.668 57.895 0.00 0.00 0.00 3.53
4523 5787 1.003839 TGAGAAACGCCGCTCCAAT 60.004 52.632 0.00 0.00 0.00 3.16
4531 5795 1.153958 GCCGCTCCAATGCTGAAAC 60.154 57.895 0.00 0.00 0.00 2.78
4533 5797 1.243342 CCGCTCCAATGCTGAAACCA 61.243 55.000 0.00 0.00 0.00 3.67
4539 5803 1.205417 CCAATGCTGAAACCATCCACC 59.795 52.381 0.00 0.00 0.00 4.61
4547 5811 1.075536 GAAACCATCCACCAGTCCCTT 59.924 52.381 0.00 0.00 0.00 3.95
4548 5812 0.405585 AACCATCCACCAGTCCCTTG 59.594 55.000 0.00 0.00 0.00 3.61
4555 5819 1.613630 ACCAGTCCCTTGAGCCGAT 60.614 57.895 0.00 0.00 0.00 4.18
4565 5829 0.976641 TTGAGCCGATGAACACCTCT 59.023 50.000 0.00 0.00 0.00 3.69
4574 5838 4.806247 CCGATGAACACCTCTAAGAATGAC 59.194 45.833 0.00 0.00 0.00 3.06
4578 5842 4.523173 TGAACACCTCTAAGAATGACGTCT 59.477 41.667 17.92 0.00 0.00 4.18
4595 5859 3.235481 TCCACGGGAGAAACGGCA 61.235 61.111 0.00 0.00 35.23 5.69
4601 5865 1.361668 CGGGAGAAACGGCACATGAG 61.362 60.000 0.00 0.00 0.00 2.90
4603 5867 1.421485 GAGAAACGGCACATGAGCG 59.579 57.895 9.09 7.16 34.64 5.03
4605 5869 3.667429 GAAACGGCACATGAGCGCC 62.667 63.158 2.29 11.54 45.28 6.53
4614 5878 2.203252 ATGAGCGCCGCCATCATT 60.203 55.556 4.98 0.00 29.42 2.57
4661 5926 1.988406 GGTAGCGGGAGGAAGTGGT 60.988 63.158 0.00 0.00 0.00 4.16
4679 5944 2.101415 TGGTAGCTTCACCTCGATGATG 59.899 50.000 7.19 0.00 39.50 3.07
4687 5960 0.462047 ACCTCGATGATGCCGGAAAC 60.462 55.000 5.05 0.00 0.00 2.78
4710 5983 2.456119 CCAAGAGCGTCGCCATCAC 61.456 63.158 14.86 0.82 0.00 3.06
4711 5984 1.446792 CAAGAGCGTCGCCATCACT 60.447 57.895 14.86 3.25 0.00 3.41
4714 5987 3.649277 GAGCGTCGCCATCACTGGT 62.649 63.158 14.86 0.00 45.10 4.00
4744 6030 1.414550 GGTCTTCACCTAGATCTGCCC 59.585 57.143 5.18 0.00 40.00 5.36
4748 6034 0.339859 TCACCTAGATCTGCCCCACT 59.660 55.000 5.18 0.00 0.00 4.00
4756 6042 1.349357 GATCTGCCCCACTAGATTCCC 59.651 57.143 0.00 0.00 33.97 3.97
4758 6044 1.143813 CTGCCCCACTAGATTCCCAT 58.856 55.000 0.00 0.00 0.00 4.00
4759 6045 1.496429 CTGCCCCACTAGATTCCCATT 59.504 52.381 0.00 0.00 0.00 3.16
4760 6046 1.215173 TGCCCCACTAGATTCCCATTG 59.785 52.381 0.00 0.00 0.00 2.82
4763 6049 2.509548 CCCCACTAGATTCCCATTGACA 59.490 50.000 0.00 0.00 0.00 3.58
4766 6052 4.141413 CCCACTAGATTCCCATTGACATCA 60.141 45.833 0.00 0.00 0.00 3.07
4774 6060 1.135527 CCCATTGACATCATGTGCACC 59.864 52.381 15.69 0.00 0.00 5.01
4776 6062 1.097232 ATTGACATCATGTGCACCGG 58.903 50.000 15.69 0.00 0.00 5.28
4777 6063 0.250684 TTGACATCATGTGCACCGGT 60.251 50.000 15.69 0.00 0.00 5.28
4783 6069 1.004560 CATGTGCACCGGTCAGACT 60.005 57.895 15.69 0.00 0.00 3.24
4794 6080 2.299297 CCGGTCAGACTACCTTCAAAGT 59.701 50.000 0.00 0.00 37.39 2.66
4806 6092 9.660180 GACTACCTTCAAAGTCTCAGATTTATT 57.340 33.333 0.00 0.00 39.24 1.40
4808 6094 9.658799 CTACCTTCAAAGTCTCAGATTTATTCA 57.341 33.333 0.00 0.00 0.00 2.57
4818 6104 7.040062 AGTCTCAGATTTATTCACCTAGATCCG 60.040 40.741 0.00 0.00 0.00 4.18
4819 6105 7.004691 TCTCAGATTTATTCACCTAGATCCGA 58.995 38.462 0.00 0.00 0.00 4.55
4820 6106 6.982852 TCAGATTTATTCACCTAGATCCGAC 58.017 40.000 0.00 0.00 0.00 4.79
4821 6107 5.859114 CAGATTTATTCACCTAGATCCGACG 59.141 44.000 0.00 0.00 0.00 5.12
4822 6108 5.768662 AGATTTATTCACCTAGATCCGACGA 59.231 40.000 0.00 0.00 0.00 4.20
4823 6109 4.825546 TTATTCACCTAGATCCGACGAC 57.174 45.455 0.00 0.00 0.00 4.34
4824 6110 2.414994 TTCACCTAGATCCGACGACT 57.585 50.000 0.00 0.00 0.00 4.18
4825 6111 3.548745 TTCACCTAGATCCGACGACTA 57.451 47.619 0.00 0.00 0.00 2.59
4826 6112 2.831333 TCACCTAGATCCGACGACTAC 58.169 52.381 0.00 0.00 0.00 2.73
4827 6113 1.872313 CACCTAGATCCGACGACTACC 59.128 57.143 0.00 0.00 0.00 3.18
4828 6114 1.767681 ACCTAGATCCGACGACTACCT 59.232 52.381 0.00 0.00 0.00 3.08
4829 6115 2.968574 ACCTAGATCCGACGACTACCTA 59.031 50.000 0.00 0.00 0.00 3.08
4830 6116 3.582208 ACCTAGATCCGACGACTACCTAT 59.418 47.826 0.00 0.00 0.00 2.57
4831 6117 4.041444 ACCTAGATCCGACGACTACCTATT 59.959 45.833 0.00 0.00 0.00 1.73
4832 6118 4.630940 CCTAGATCCGACGACTACCTATTC 59.369 50.000 0.00 0.00 0.00 1.75
4833 6119 4.082665 AGATCCGACGACTACCTATTCA 57.917 45.455 0.00 0.00 0.00 2.57
4834 6120 4.458397 AGATCCGACGACTACCTATTCAA 58.542 43.478 0.00 0.00 0.00 2.69
4835 6121 4.885907 AGATCCGACGACTACCTATTCAAA 59.114 41.667 0.00 0.00 0.00 2.69
4836 6122 5.535406 AGATCCGACGACTACCTATTCAAAT 59.465 40.000 0.00 0.00 0.00 2.32
4837 6123 4.928601 TCCGACGACTACCTATTCAAATG 58.071 43.478 0.00 0.00 0.00 2.32
4838 6124 4.641541 TCCGACGACTACCTATTCAAATGA 59.358 41.667 0.00 0.00 0.00 2.57
4839 6125 5.125900 TCCGACGACTACCTATTCAAATGAA 59.874 40.000 0.00 0.00 38.56 2.57
4840 6126 5.808540 CCGACGACTACCTATTCAAATGAAA 59.191 40.000 0.00 0.00 37.61 2.69
4841 6127 6.019801 CCGACGACTACCTATTCAAATGAAAG 60.020 42.308 0.00 0.00 37.61 2.62
4842 6128 6.530534 CGACGACTACCTATTCAAATGAAAGT 59.469 38.462 0.00 0.00 37.61 2.66
4843 6129 7.063074 CGACGACTACCTATTCAAATGAAAGTT 59.937 37.037 0.00 0.00 37.61 2.66
4844 6130 8.617290 ACGACTACCTATTCAAATGAAAGTTT 57.383 30.769 0.00 0.00 37.61 2.66
4845 6131 8.718734 ACGACTACCTATTCAAATGAAAGTTTC 58.281 33.333 8.75 8.75 37.61 2.78
4846 6132 8.717821 CGACTACCTATTCAAATGAAAGTTTCA 58.282 33.333 20.14 20.14 45.01 2.69
4862 6148 9.687210 TGAAAGTTTCATGATGAAAAATGAGAG 57.313 29.630 20.94 0.00 46.53 3.20
4863 6149 9.136952 GAAAGTTTCATGATGAAAAATGAGAGG 57.863 33.333 20.94 0.00 46.53 3.69
4864 6150 6.628185 AGTTTCATGATGAAAAATGAGAGGC 58.372 36.000 20.94 6.70 46.53 4.70
4865 6151 4.888038 TCATGATGAAAAATGAGAGGCG 57.112 40.909 0.00 0.00 0.00 5.52
4866 6152 4.264253 TCATGATGAAAAATGAGAGGCGT 58.736 39.130 0.00 0.00 0.00 5.68
4867 6153 4.701651 TCATGATGAAAAATGAGAGGCGTT 59.298 37.500 0.00 0.00 0.00 4.84
4868 6154 5.183713 TCATGATGAAAAATGAGAGGCGTTT 59.816 36.000 0.00 0.00 37.31 3.60
4869 6155 5.452078 TGATGAAAAATGAGAGGCGTTTT 57.548 34.783 0.00 0.00 45.23 2.43
4874 6160 4.664150 AAAATGAGAGGCGTTTTTGGAA 57.336 36.364 0.00 0.00 41.68 3.53
4875 6161 4.871933 AAATGAGAGGCGTTTTTGGAAT 57.128 36.364 0.00 0.00 31.78 3.01
4876 6162 5.975693 AAATGAGAGGCGTTTTTGGAATA 57.024 34.783 0.00 0.00 31.78 1.75
4877 6163 5.567138 AATGAGAGGCGTTTTTGGAATAG 57.433 39.130 0.00 0.00 0.00 1.73
4878 6164 2.747446 TGAGAGGCGTTTTTGGAATAGC 59.253 45.455 0.00 0.00 0.00 2.97
4879 6165 1.737793 AGAGGCGTTTTTGGAATAGCG 59.262 47.619 0.00 0.00 0.00 4.26
4880 6166 0.808755 AGGCGTTTTTGGAATAGCGG 59.191 50.000 0.00 0.00 0.00 5.52
4881 6167 0.806241 GGCGTTTTTGGAATAGCGGA 59.194 50.000 0.00 0.00 0.00 5.54
4882 6168 1.202143 GGCGTTTTTGGAATAGCGGAG 60.202 52.381 0.00 0.00 0.00 4.63
4883 6169 1.202143 GCGTTTTTGGAATAGCGGAGG 60.202 52.381 0.00 0.00 0.00 4.30
4884 6170 1.202143 CGTTTTTGGAATAGCGGAGGC 60.202 52.381 0.00 0.00 40.37 4.70
4885 6171 1.134367 GTTTTTGGAATAGCGGAGGCC 59.866 52.381 0.00 0.00 41.24 5.19
4886 6172 0.623723 TTTTGGAATAGCGGAGGCCT 59.376 50.000 3.86 3.86 41.24 5.19
4887 6173 0.623723 TTTGGAATAGCGGAGGCCTT 59.376 50.000 6.77 0.00 41.24 4.35
4888 6174 0.107214 TTGGAATAGCGGAGGCCTTG 60.107 55.000 6.77 3.69 41.24 3.61
4889 6175 1.894282 GGAATAGCGGAGGCCTTGC 60.894 63.158 20.13 20.13 41.24 4.01
4890 6176 1.153168 GAATAGCGGAGGCCTTGCA 60.153 57.895 26.84 16.01 41.24 4.08
4891 6177 1.153086 AATAGCGGAGGCCTTGCAG 60.153 57.895 26.84 10.02 41.24 4.41
4892 6178 1.626356 AATAGCGGAGGCCTTGCAGA 61.626 55.000 26.84 17.20 41.24 4.26
4893 6179 2.317149 ATAGCGGAGGCCTTGCAGAC 62.317 60.000 26.84 6.05 41.24 3.51
4894 6180 4.400961 GCGGAGGCCTTGCAGACT 62.401 66.667 22.11 0.00 0.00 3.24
4895 6181 2.348998 CGGAGGCCTTGCAGACTT 59.651 61.111 6.77 0.00 0.00 3.01
4896 6182 2.037136 CGGAGGCCTTGCAGACTTG 61.037 63.158 6.77 0.00 0.00 3.16
4897 6183 1.676967 GGAGGCCTTGCAGACTTGG 60.677 63.158 6.77 0.00 0.00 3.61
4898 6184 2.282745 AGGCCTTGCAGACTTGGC 60.283 61.111 0.00 7.81 44.22 4.52
4899 6185 2.282745 GGCCTTGCAGACTTGGCT 60.283 61.111 0.00 0.00 44.36 4.75
4900 6186 1.002134 GGCCTTGCAGACTTGGCTA 60.002 57.895 0.00 0.00 44.36 3.93
4901 6187 0.394899 GGCCTTGCAGACTTGGCTAT 60.395 55.000 0.00 0.00 44.36 2.97
4902 6188 1.134098 GGCCTTGCAGACTTGGCTATA 60.134 52.381 0.00 0.00 44.36 1.31
4903 6189 1.943340 GCCTTGCAGACTTGGCTATAC 59.057 52.381 8.72 0.00 41.92 1.47
4904 6190 2.680805 GCCTTGCAGACTTGGCTATACA 60.681 50.000 8.72 0.00 41.92 2.29
4905 6191 3.813443 CCTTGCAGACTTGGCTATACAT 58.187 45.455 0.00 0.00 0.00 2.29
4906 6192 4.743651 GCCTTGCAGACTTGGCTATACATA 60.744 45.833 8.72 0.00 41.92 2.29
4907 6193 4.993584 CCTTGCAGACTTGGCTATACATAG 59.006 45.833 0.00 0.00 0.00 2.23
4908 6194 4.607293 TGCAGACTTGGCTATACATAGG 57.393 45.455 0.00 0.00 0.00 2.57
4909 6195 3.967326 TGCAGACTTGGCTATACATAGGT 59.033 43.478 0.00 0.00 0.00 3.08
4910 6196 4.408921 TGCAGACTTGGCTATACATAGGTT 59.591 41.667 0.00 0.00 0.00 3.50
4911 6197 5.104527 TGCAGACTTGGCTATACATAGGTTT 60.105 40.000 0.00 0.00 0.00 3.27
4912 6198 5.467063 GCAGACTTGGCTATACATAGGTTTC 59.533 44.000 0.00 0.00 0.00 2.78
4913 6199 6.686632 GCAGACTTGGCTATACATAGGTTTCT 60.687 42.308 0.00 0.00 0.00 2.52
4914 6200 7.275920 CAGACTTGGCTATACATAGGTTTCTT 58.724 38.462 0.00 0.00 0.00 2.52
4915 6201 7.225538 CAGACTTGGCTATACATAGGTTTCTTG 59.774 40.741 0.00 0.00 0.00 3.02
4916 6202 6.958767 ACTTGGCTATACATAGGTTTCTTGT 58.041 36.000 0.00 0.00 0.00 3.16
4917 6203 7.402862 ACTTGGCTATACATAGGTTTCTTGTT 58.597 34.615 0.00 0.00 0.00 2.83
4918 6204 8.545472 ACTTGGCTATACATAGGTTTCTTGTTA 58.455 33.333 0.00 0.00 0.00 2.41
4919 6205 9.391006 CTTGGCTATACATAGGTTTCTTGTTAA 57.609 33.333 0.00 0.00 0.00 2.01
4920 6206 9.742144 TTGGCTATACATAGGTTTCTTGTTAAA 57.258 29.630 0.00 0.00 0.00 1.52
4921 6207 9.914834 TGGCTATACATAGGTTTCTTGTTAAAT 57.085 29.630 0.00 0.00 0.00 1.40
4960 6246 9.289303 ACAAATTATACTTTATTCGCTTGCTTG 57.711 29.630 0.00 0.00 0.00 4.01
4961 6247 9.502145 CAAATTATACTTTATTCGCTTGCTTGA 57.498 29.630 0.00 0.00 0.00 3.02
4962 6248 9.722056 AAATTATACTTTATTCGCTTGCTTGAG 57.278 29.630 0.00 0.00 0.00 3.02
4963 6249 8.662781 ATTATACTTTATTCGCTTGCTTGAGA 57.337 30.769 0.00 0.00 0.00 3.27
4964 6250 4.670227 ACTTTATTCGCTTGCTTGAGAC 57.330 40.909 0.00 0.00 0.00 3.36
4965 6251 4.065088 ACTTTATTCGCTTGCTTGAGACA 58.935 39.130 0.00 0.00 0.00 3.41
4966 6252 4.153117 ACTTTATTCGCTTGCTTGAGACAG 59.847 41.667 0.00 0.00 0.00 3.51
4967 6253 1.446907 ATTCGCTTGCTTGAGACAGG 58.553 50.000 0.00 0.00 0.00 4.00
4968 6254 0.106708 TTCGCTTGCTTGAGACAGGT 59.893 50.000 0.00 0.00 0.00 4.00
4969 6255 0.966179 TCGCTTGCTTGAGACAGGTA 59.034 50.000 0.00 0.00 0.00 3.08
4970 6256 1.067565 TCGCTTGCTTGAGACAGGTAG 60.068 52.381 0.00 0.00 0.00 3.18
4971 6257 1.067565 CGCTTGCTTGAGACAGGTAGA 60.068 52.381 0.00 0.00 0.00 2.59
4972 6258 2.615869 GCTTGCTTGAGACAGGTAGAG 58.384 52.381 0.00 0.00 0.00 2.43
4973 6259 2.232452 GCTTGCTTGAGACAGGTAGAGA 59.768 50.000 0.00 0.00 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.250513 AGAGAACATTGGAGCCGTCC 59.749 55.000 0.00 0.00 44.24 4.79
2 3 2.961526 TAGAGAACATTGGAGCCGTC 57.038 50.000 0.00 0.00 0.00 4.79
3 4 3.452627 AGAATAGAGAACATTGGAGCCGT 59.547 43.478 0.00 0.00 0.00 5.68
4 5 4.065321 AGAATAGAGAACATTGGAGCCG 57.935 45.455 0.00 0.00 0.00 5.52
5 6 4.819088 GGAAGAATAGAGAACATTGGAGCC 59.181 45.833 0.00 0.00 0.00 4.70
6 7 4.819088 GGGAAGAATAGAGAACATTGGAGC 59.181 45.833 0.00 0.00 0.00 4.70
7 8 5.053145 CGGGAAGAATAGAGAACATTGGAG 58.947 45.833 0.00 0.00 0.00 3.86
8 9 4.683400 GCGGGAAGAATAGAGAACATTGGA 60.683 45.833 0.00 0.00 0.00 3.53
9 10 3.561725 GCGGGAAGAATAGAGAACATTGG 59.438 47.826 0.00 0.00 0.00 3.16
10 11 4.191544 TGCGGGAAGAATAGAGAACATTG 58.808 43.478 0.00 0.00 0.00 2.82
11 12 4.487714 TGCGGGAAGAATAGAGAACATT 57.512 40.909 0.00 0.00 0.00 2.71
12 13 4.487714 TTGCGGGAAGAATAGAGAACAT 57.512 40.909 0.00 0.00 0.00 2.71
13 14 3.973206 TTGCGGGAAGAATAGAGAACA 57.027 42.857 0.00 0.00 0.00 3.18
14 15 4.093556 CACTTTGCGGGAAGAATAGAGAAC 59.906 45.833 1.86 0.00 0.00 3.01
15 16 4.020573 TCACTTTGCGGGAAGAATAGAGAA 60.021 41.667 1.86 0.00 0.00 2.87
16 17 3.513912 TCACTTTGCGGGAAGAATAGAGA 59.486 43.478 1.86 0.00 0.00 3.10
17 18 3.861840 TCACTTTGCGGGAAGAATAGAG 58.138 45.455 1.86 0.00 0.00 2.43
18 19 3.861840 CTCACTTTGCGGGAAGAATAGA 58.138 45.455 1.86 0.00 0.00 1.98
19 20 2.352960 GCTCACTTTGCGGGAAGAATAG 59.647 50.000 1.86 0.00 0.00 1.73
20 21 2.290008 TGCTCACTTTGCGGGAAGAATA 60.290 45.455 1.86 0.00 0.00 1.75
21 22 1.168714 GCTCACTTTGCGGGAAGAAT 58.831 50.000 1.86 0.00 0.00 2.40
22 23 0.179032 TGCTCACTTTGCGGGAAGAA 60.179 50.000 1.86 0.00 0.00 2.52
23 24 0.884704 GTGCTCACTTTGCGGGAAGA 60.885 55.000 1.86 0.00 0.00 2.87
24 25 1.576421 GTGCTCACTTTGCGGGAAG 59.424 57.895 0.00 0.00 0.00 3.46
25 26 2.250939 CGTGCTCACTTTGCGGGAA 61.251 57.895 0.00 0.00 0.00 3.97
26 27 2.449031 ATCGTGCTCACTTTGCGGGA 62.449 55.000 0.00 0.00 0.00 5.14
27 28 0.739462 TATCGTGCTCACTTTGCGGG 60.739 55.000 0.00 0.00 0.00 6.13
28 29 0.370273 GTATCGTGCTCACTTTGCGG 59.630 55.000 0.00 0.00 0.00 5.69
29 30 1.067693 TGTATCGTGCTCACTTTGCG 58.932 50.000 0.00 0.00 0.00 4.85
30 31 1.128692 GGTGTATCGTGCTCACTTTGC 59.871 52.381 0.00 0.00 33.30 3.68
31 32 1.390123 CGGTGTATCGTGCTCACTTTG 59.610 52.381 0.00 0.00 33.30 2.77
32 33 1.271379 TCGGTGTATCGTGCTCACTTT 59.729 47.619 0.00 0.00 33.30 2.66
33 34 0.885879 TCGGTGTATCGTGCTCACTT 59.114 50.000 0.00 0.00 33.30 3.16
34 35 1.065701 GATCGGTGTATCGTGCTCACT 59.934 52.381 0.00 0.00 33.30 3.41
35 36 1.478137 GATCGGTGTATCGTGCTCAC 58.522 55.000 0.00 0.00 0.00 3.51
36 37 0.028902 CGATCGGTGTATCGTGCTCA 59.971 55.000 7.38 0.00 42.93 4.26
37 38 2.784712 CGATCGGTGTATCGTGCTC 58.215 57.895 7.38 0.00 42.93 4.26
43 44 3.097728 CCGCGCGATCGGTGTATC 61.098 66.667 34.63 0.00 44.18 2.24
50 51 1.601147 GAGAATTCTCCGCGCGATCG 61.601 60.000 34.63 18.69 37.02 3.69
51 52 2.137502 GAGAATTCTCCGCGCGATC 58.862 57.895 34.63 17.98 37.02 3.69
52 53 4.327885 GAGAATTCTCCGCGCGAT 57.672 55.556 34.63 14.49 37.02 4.58
60 61 1.202475 GGAGAGCACGGGAGAATTCTC 60.202 57.143 24.68 24.68 42.14 2.87
61 62 0.827368 GGAGAGCACGGGAGAATTCT 59.173 55.000 7.95 7.95 0.00 2.40
62 63 0.179070 GGGAGAGCACGGGAGAATTC 60.179 60.000 0.00 0.00 0.00 2.17
63 64 0.909610 TGGGAGAGCACGGGAGAATT 60.910 55.000 0.00 0.00 0.00 2.17
64 65 1.306141 TGGGAGAGCACGGGAGAAT 60.306 57.895 0.00 0.00 0.00 2.40
65 66 1.984570 CTGGGAGAGCACGGGAGAA 60.985 63.158 0.00 0.00 0.00 2.87
66 67 2.363018 CTGGGAGAGCACGGGAGA 60.363 66.667 0.00 0.00 0.00 3.71
75 76 0.690411 ATCACCTGGAGCTGGGAGAG 60.690 60.000 0.00 0.00 0.00 3.20
76 77 0.689080 GATCACCTGGAGCTGGGAGA 60.689 60.000 0.00 0.00 0.00 3.71
77 78 0.979709 TGATCACCTGGAGCTGGGAG 60.980 60.000 0.00 0.00 31.67 4.30
78 79 1.080907 TGATCACCTGGAGCTGGGA 59.919 57.895 0.00 0.00 31.67 4.37
79 80 1.222936 GTGATCACCTGGAGCTGGG 59.777 63.158 15.31 0.00 31.67 4.45
80 81 1.153489 CGTGATCACCTGGAGCTGG 60.153 63.158 20.03 0.00 31.67 4.85
81 82 0.459237 GACGTGATCACCTGGAGCTG 60.459 60.000 20.03 5.96 31.67 4.24
82 83 0.900182 TGACGTGATCACCTGGAGCT 60.900 55.000 20.03 0.00 31.67 4.09
83 84 0.176680 ATGACGTGATCACCTGGAGC 59.823 55.000 20.03 4.15 41.24 4.70
84 85 1.202463 GGATGACGTGATCACCTGGAG 60.202 57.143 20.03 8.12 41.24 3.86
85 86 0.824109 GGATGACGTGATCACCTGGA 59.176 55.000 20.03 2.29 41.24 3.86
86 87 0.536724 TGGATGACGTGATCACCTGG 59.463 55.000 20.03 8.85 41.24 4.45
87 88 2.207590 CATGGATGACGTGATCACCTG 58.792 52.381 20.03 9.58 41.24 4.00
88 89 1.473965 GCATGGATGACGTGATCACCT 60.474 52.381 20.03 8.74 41.24 4.00
89 90 0.940126 GCATGGATGACGTGATCACC 59.060 55.000 20.03 7.67 41.24 4.02
90 91 0.940126 GGCATGGATGACGTGATCAC 59.060 55.000 16.93 16.21 41.24 3.06
91 92 0.832626 AGGCATGGATGACGTGATCA 59.167 50.000 16.93 3.70 41.91 2.92
92 93 1.600957 CAAGGCATGGATGACGTGATC 59.399 52.381 6.44 6.44 46.34 2.92
93 94 1.671979 CAAGGCATGGATGACGTGAT 58.328 50.000 2.49 0.00 46.34 3.06
94 95 1.026182 GCAAGGCATGGATGACGTGA 61.026 55.000 12.03 0.00 46.34 4.35
95 96 1.430632 GCAAGGCATGGATGACGTG 59.569 57.895 4.20 4.20 46.20 4.49
96 97 1.750399 GGCAAGGCATGGATGACGT 60.750 57.895 0.00 0.00 41.91 4.34
97 98 2.827051 CGGCAAGGCATGGATGACG 61.827 63.158 0.00 0.00 41.91 4.35
98 99 3.113745 CGGCAAGGCATGGATGAC 58.886 61.111 0.00 0.00 35.53 3.06
99 100 2.829914 GCGGCAAGGCATGGATGA 60.830 61.111 0.00 0.00 0.00 2.92
100 101 3.133767 CTGCGGCAAGGCATGGATG 62.134 63.158 3.44 0.00 42.99 3.51
101 102 2.831742 CTGCGGCAAGGCATGGAT 60.832 61.111 3.44 0.00 42.99 3.41
104 105 4.189188 GAGCTGCGGCAAGGCATG 62.189 66.667 21.93 0.00 42.99 4.06
105 106 4.728110 TGAGCTGCGGCAAGGCAT 62.728 61.111 21.93 0.00 42.99 4.40
109 110 3.932580 TACGGTGAGCTGCGGCAAG 62.933 63.158 21.93 8.16 41.70 4.01
110 111 2.997952 TTTACGGTGAGCTGCGGCAA 62.998 55.000 21.93 4.26 41.70 4.52
111 112 2.997952 TTTTACGGTGAGCTGCGGCA 62.998 55.000 21.93 1.29 41.70 5.69
112 113 2.240612 CTTTTACGGTGAGCTGCGGC 62.241 60.000 10.33 10.33 39.06 6.53
113 114 0.669318 TCTTTTACGGTGAGCTGCGG 60.669 55.000 0.00 0.00 0.00 5.69
114 115 1.144969 TTCTTTTACGGTGAGCTGCG 58.855 50.000 0.00 0.00 0.00 5.18
115 116 3.831715 AATTCTTTTACGGTGAGCTGC 57.168 42.857 0.00 0.00 0.00 5.25
116 117 5.757886 TCAAAATTCTTTTACGGTGAGCTG 58.242 37.500 0.00 0.00 0.00 4.24
117 118 6.381801 CATCAAAATTCTTTTACGGTGAGCT 58.618 36.000 0.00 0.00 0.00 4.09
118 119 5.060940 GCATCAAAATTCTTTTACGGTGAGC 59.939 40.000 0.00 0.00 0.00 4.26
119 120 6.148948 TGCATCAAAATTCTTTTACGGTGAG 58.851 36.000 0.00 0.00 0.00 3.51
120 121 6.078202 TGCATCAAAATTCTTTTACGGTGA 57.922 33.333 0.00 0.00 0.00 4.02
121 122 6.585702 TCATGCATCAAAATTCTTTTACGGTG 59.414 34.615 0.00 0.00 0.00 4.94
122 123 6.586082 GTCATGCATCAAAATTCTTTTACGGT 59.414 34.615 0.00 0.00 0.00 4.83
123 124 6.585702 TGTCATGCATCAAAATTCTTTTACGG 59.414 34.615 0.00 0.00 0.00 4.02
124 125 7.565450 TGTCATGCATCAAAATTCTTTTACG 57.435 32.000 0.00 0.00 0.00 3.18
125 126 8.763356 TGTTGTCATGCATCAAAATTCTTTTAC 58.237 29.630 0.00 0.00 0.00 2.01
141 142 1.131883 CTGCTAGGCTTGTTGTCATGC 59.868 52.381 0.00 0.00 41.85 4.06
183 184 7.387948 GGAGTGCCATAACATATTACGATCTTT 59.612 37.037 0.00 0.00 0.00 2.52
199 200 8.084985 TGGATATATTAATTCGGAGTGCCATA 57.915 34.615 0.00 0.00 0.00 2.74
202 203 7.865706 ATTGGATATATTAATTCGGAGTGCC 57.134 36.000 0.00 0.00 0.00 5.01
342 872 6.371548 TGTCTTGTACATTTCTTGTCCATAGC 59.628 38.462 0.00 0.00 39.87 2.97
403 1015 3.412386 AGGTTATCAACAAGACCAGTGC 58.588 45.455 0.00 0.00 34.60 4.40
411 1023 8.322906 TGAAGTACATCAAGGTTATCAACAAG 57.677 34.615 0.00 0.00 0.00 3.16
458 1070 5.539955 ACAAGAAACACCATCCTAAAGCAAT 59.460 36.000 0.00 0.00 0.00 3.56
489 1101 5.705609 TGTTTGTCCTTCTATTTTGCTCC 57.294 39.130 0.00 0.00 0.00 4.70
494 1106 8.635765 TGCTTCTATGTTTGTCCTTCTATTTT 57.364 30.769 0.00 0.00 0.00 1.82
619 1231 0.956633 TGGAGTCGCGTAACTGTTCT 59.043 50.000 5.77 0.00 0.00 3.01
639 1251 2.620115 CGAAGCCGTATACCTGTCCTTA 59.380 50.000 0.00 0.00 0.00 2.69
677 1289 7.201750 GCTCGGGTAAAATTTGGTATTCATGTA 60.202 37.037 0.00 0.00 0.00 2.29
681 1293 4.399934 GGCTCGGGTAAAATTTGGTATTCA 59.600 41.667 0.00 0.00 0.00 2.57
682 1294 4.399934 TGGCTCGGGTAAAATTTGGTATTC 59.600 41.667 0.00 0.00 0.00 1.75
683 1295 4.345854 TGGCTCGGGTAAAATTTGGTATT 58.654 39.130 0.00 0.00 0.00 1.89
697 1309 9.063615 AGTATATAATAAAACTTTTGGCTCGGG 57.936 33.333 0.00 0.00 0.00 5.14
719 1331 9.621239 TCATCTATTTTAGAATGGAGGGAGTAT 57.379 33.333 4.57 0.00 36.39 2.12
720 1332 8.871125 GTCATCTATTTTAGAATGGAGGGAGTA 58.129 37.037 4.57 0.00 36.39 2.59
721 1333 7.570607 AGTCATCTATTTTAGAATGGAGGGAGT 59.429 37.037 4.57 2.64 36.39 3.85
722 1334 7.972301 AGTCATCTATTTTAGAATGGAGGGAG 58.028 38.462 4.57 0.00 36.39 4.30
723 1335 7.568738 TGAGTCATCTATTTTAGAATGGAGGGA 59.431 37.037 4.57 0.04 36.39 4.20
724 1336 7.739825 TGAGTCATCTATTTTAGAATGGAGGG 58.260 38.462 4.57 0.00 36.39 4.30
725 1337 9.050601 GTTGAGTCATCTATTTTAGAATGGAGG 57.949 37.037 0.00 0.00 36.39 4.30
726 1338 9.829507 AGTTGAGTCATCTATTTTAGAATGGAG 57.170 33.333 1.70 0.00 36.39 3.86
735 1347 9.337396 TGTGTACAAAGTTGAGTCATCTATTTT 57.663 29.630 0.00 0.00 0.00 1.82
736 1348 8.902540 TGTGTACAAAGTTGAGTCATCTATTT 57.097 30.769 0.00 0.00 0.00 1.40
737 1349 8.902540 TTGTGTACAAAGTTGAGTCATCTATT 57.097 30.769 0.00 0.00 32.11 1.73
738 1350 8.774586 GTTTGTGTACAAAGTTGAGTCATCTAT 58.225 33.333 10.22 0.00 45.36 1.98
739 1351 7.766738 TGTTTGTGTACAAAGTTGAGTCATCTA 59.233 33.333 10.22 0.00 45.36 1.98
740 1352 6.597672 TGTTTGTGTACAAAGTTGAGTCATCT 59.402 34.615 10.22 0.00 45.36 2.90
741 1353 6.781138 TGTTTGTGTACAAAGTTGAGTCATC 58.219 36.000 10.22 0.00 45.36 2.92
742 1354 6.597672 TCTGTTTGTGTACAAAGTTGAGTCAT 59.402 34.615 10.22 0.00 45.36 3.06
743 1355 5.935206 TCTGTTTGTGTACAAAGTTGAGTCA 59.065 36.000 10.22 0.00 45.36 3.41
744 1356 6.417191 TCTGTTTGTGTACAAAGTTGAGTC 57.583 37.500 10.22 0.00 45.36 3.36
745 1357 7.391148 AATCTGTTTGTGTACAAAGTTGAGT 57.609 32.000 10.22 6.09 45.36 3.41
746 1358 8.687824 AAAATCTGTTTGTGTACAAAGTTGAG 57.312 30.769 10.22 5.32 45.36 3.02
747 1359 8.300286 TGAAAATCTGTTTGTGTACAAAGTTGA 58.700 29.630 10.22 9.14 45.36 3.18
748 1360 8.459521 TGAAAATCTGTTTGTGTACAAAGTTG 57.540 30.769 10.22 4.71 45.36 3.16
749 1361 9.482627 TTTGAAAATCTGTTTGTGTACAAAGTT 57.517 25.926 10.22 2.16 45.36 2.66
750 1362 9.651913 ATTTGAAAATCTGTTTGTGTACAAAGT 57.348 25.926 10.22 0.00 45.36 2.66
841 1454 3.369052 CGGATAGTGAGGGTAGCAACAAA 60.369 47.826 0.00 0.00 0.00 2.83
842 1455 2.167693 CGGATAGTGAGGGTAGCAACAA 59.832 50.000 0.00 0.00 0.00 2.83
862 1476 4.373324 CGTTTATTATTACGTGGCGAGACG 60.373 45.833 0.00 5.23 45.09 4.18
958 1572 2.026542 TGGGAGTGAGAAGCTCGTAGTA 60.027 50.000 0.00 0.00 34.00 1.82
964 1582 0.534873 GGAGTGGGAGTGAGAAGCTC 59.465 60.000 0.00 0.00 0.00 4.09
1077 1695 0.397254 ACGATCCTGTCCGATTCCCT 60.397 55.000 0.00 0.00 0.00 4.20
1275 1893 3.547613 CGAATTACCCTAGGACGAAGACG 60.548 52.174 11.48 4.16 45.75 4.18
1297 1915 3.716204 GACGGGGATTGAAGGGGCC 62.716 68.421 0.00 0.00 0.00 5.80
1553 2174 6.218019 CACAAGACAATGGAATTCACACATT 58.782 36.000 7.93 5.28 31.22 2.71
1571 2192 7.053498 TGAAATTACTAGGCATATGCACAAGA 58.947 34.615 28.07 10.21 44.36 3.02
1608 2229 6.035220 CACATTGCAGGCACATACAAATTAAG 59.965 38.462 0.00 0.00 0.00 1.85
1753 2374 5.304686 TGTTCCACCCTTGATATATCACC 57.695 43.478 15.10 0.00 36.36 4.02
1758 2379 5.827797 GCTTCATTGTTCCACCCTTGATATA 59.172 40.000 0.00 0.00 0.00 0.86
1767 2388 2.423577 AGTACGCTTCATTGTTCCACC 58.576 47.619 0.00 0.00 0.00 4.61
1932 3158 7.481642 TGGTTGTTTACGTCAAATAATTGTGT 58.518 30.769 0.00 0.00 37.79 3.72
1933 3159 7.916128 TGGTTGTTTACGTCAAATAATTGTG 57.084 32.000 0.00 0.00 37.79 3.33
1960 3186 2.832129 CTGGTACTGGACAGGTACACAT 59.168 50.000 4.14 0.00 40.67 3.21
2131 3357 0.818040 ACCAGTTTGAACCTCCGTGC 60.818 55.000 0.00 0.00 0.00 5.34
2456 3684 2.239907 ACCCATCTCTAGAACCTTTGGC 59.760 50.000 0.00 0.00 0.00 4.52
2477 3705 6.040391 CCATGTAAGGAAACTGTTTCTTTCCA 59.960 38.462 27.06 23.39 46.42 3.53
2595 3823 6.089954 GGAATAAAAAGTTCAGCAACATGAGC 59.910 38.462 0.00 2.85 34.60 4.26
2709 3937 7.619964 TGATGTTATATCCATCATGCATCAC 57.380 36.000 11.89 0.00 42.73 3.06
2724 3952 7.564793 ACCTGCAACATAAGAGTGATGTTATA 58.435 34.615 0.97 0.00 43.91 0.98
2863 4091 6.348295 GGCTTAGAACAAGTTTGTAAGGCTAC 60.348 42.308 21.92 8.00 41.31 3.58
2875 4103 4.519350 GCAAGTAAAGGGCTTAGAACAAGT 59.481 41.667 0.00 0.00 0.00 3.16
2971 4199 5.263968 TCCTGGTCTCTTCGATTATCAAC 57.736 43.478 0.00 0.00 0.00 3.18
3107 4337 1.247567 AGTGTACATGGCTTGTTGGC 58.752 50.000 11.53 3.88 39.87 4.52
3121 4351 8.780846 ACGATTACATGGAATAAACAAGTGTA 57.219 30.769 2.23 0.00 0.00 2.90
3125 4355 8.196802 TCAGACGATTACATGGAATAAACAAG 57.803 34.615 2.23 0.00 0.00 3.16
3189 4419 3.330267 CTTTGCAGGACTGTAGGAAGAC 58.670 50.000 0.82 0.00 0.00 3.01
3219 4449 3.250617 TGCCCATATCTCTATTGGCTGA 58.749 45.455 8.61 0.00 43.44 4.26
3253 4483 7.278646 GCTGTGAATAATGACAAGTAGTGATGA 59.721 37.037 0.00 0.00 0.00 2.92
3255 4485 7.105588 TGCTGTGAATAATGACAAGTAGTGAT 58.894 34.615 0.00 0.00 0.00 3.06
3304 4535 5.054477 CCTGGAAATGGTAATACACTACGG 58.946 45.833 0.00 0.00 0.00 4.02
3342 4573 5.770685 AGGAGATCCCTGATAATAAAGGC 57.229 43.478 2.27 0.00 45.61 4.35
3461 4692 8.158169 TGATGGTAGAATGTTCATCTATTTGC 57.842 34.615 0.00 0.00 37.48 3.68
3469 4700 5.363562 TGCTCTGATGGTAGAATGTTCAT 57.636 39.130 0.00 0.00 0.00 2.57
3474 4705 9.716531 TTCTATAAATGCTCTGATGGTAGAATG 57.283 33.333 0.00 0.00 0.00 2.67
3498 4729 7.852945 GTCATTTATACAGCTGTTATGCACTTC 59.147 37.037 27.06 5.87 34.99 3.01
3499 4730 7.201732 GGTCATTTATACAGCTGTTATGCACTT 60.202 37.037 27.06 0.00 34.99 3.16
3587 4818 2.012673 GGAGTTCTGGCTGTTAGCATG 58.987 52.381 2.99 0.00 44.75 4.06
3637 4868 0.663153 GCAGGTGTGGAAGTGTGAAC 59.337 55.000 0.00 0.00 0.00 3.18
3638 4869 0.546122 AGCAGGTGTGGAAGTGTGAA 59.454 50.000 0.00 0.00 0.00 3.18
3639 4870 0.179048 CAGCAGGTGTGGAAGTGTGA 60.179 55.000 0.00 0.00 0.00 3.58
3640 4871 0.464373 ACAGCAGGTGTGGAAGTGTG 60.464 55.000 3.92 0.00 38.28 3.82
3641 4872 0.179045 GACAGCAGGTGTGGAAGTGT 60.179 55.000 10.75 0.00 40.56 3.55
3642 4873 0.107456 AGACAGCAGGTGTGGAAGTG 59.893 55.000 10.75 0.00 40.56 3.16
3644 4875 1.344438 TGTAGACAGCAGGTGTGGAAG 59.656 52.381 10.75 0.00 40.56 3.46
3645 4876 1.070134 GTGTAGACAGCAGGTGTGGAA 59.930 52.381 10.75 0.00 40.56 3.53
3647 4878 0.392706 TGTGTAGACAGCAGGTGTGG 59.607 55.000 10.75 0.00 40.56 4.17
3649 4880 1.119684 TGTGTGTAGACAGCAGGTGT 58.880 50.000 4.51 4.51 44.49 4.16
3650 4881 1.202521 TGTGTGTGTAGACAGCAGGTG 60.203 52.381 0.00 0.00 30.74 4.00
3651 4882 1.119684 TGTGTGTGTAGACAGCAGGT 58.880 50.000 0.00 0.00 30.74 4.00
3653 4884 1.502231 GGTGTGTGTGTAGACAGCAG 58.498 55.000 0.00 0.00 44.99 4.24
3655 4886 0.393077 AGGGTGTGTGTGTAGACAGC 59.607 55.000 0.00 0.00 44.93 4.40
3656 4887 3.572682 TCTTAGGGTGTGTGTGTAGACAG 59.427 47.826 0.00 0.00 29.81 3.51
3657 4888 3.568443 TCTTAGGGTGTGTGTGTAGACA 58.432 45.455 0.00 0.00 0.00 3.41
3658 4889 4.595762 TTCTTAGGGTGTGTGTGTAGAC 57.404 45.455 0.00 0.00 0.00 2.59
3659 4890 5.607477 CTTTTCTTAGGGTGTGTGTGTAGA 58.393 41.667 0.00 0.00 0.00 2.59
3660 4891 4.213482 GCTTTTCTTAGGGTGTGTGTGTAG 59.787 45.833 0.00 0.00 0.00 2.74
3661 4892 4.131596 GCTTTTCTTAGGGTGTGTGTGTA 58.868 43.478 0.00 0.00 0.00 2.90
3662 4893 2.949644 GCTTTTCTTAGGGTGTGTGTGT 59.050 45.455 0.00 0.00 0.00 3.72
3663 4894 2.948979 TGCTTTTCTTAGGGTGTGTGTG 59.051 45.455 0.00 0.00 0.00 3.82
3664 4895 3.290948 TGCTTTTCTTAGGGTGTGTGT 57.709 42.857 0.00 0.00 0.00 3.72
3665 4896 4.074970 AGATGCTTTTCTTAGGGTGTGTG 58.925 43.478 0.00 0.00 0.00 3.82
3666 4897 4.327680 GAGATGCTTTTCTTAGGGTGTGT 58.672 43.478 0.00 0.00 0.00 3.72
3667 4898 3.372206 CGAGATGCTTTTCTTAGGGTGTG 59.628 47.826 0.00 0.00 0.00 3.82
3668 4899 3.008049 ACGAGATGCTTTTCTTAGGGTGT 59.992 43.478 0.00 0.00 0.00 4.16
3669 4900 3.600388 ACGAGATGCTTTTCTTAGGGTG 58.400 45.455 0.00 0.00 0.00 4.61
3670 4901 3.983044 ACGAGATGCTTTTCTTAGGGT 57.017 42.857 0.00 0.00 0.00 4.34
3671 4902 4.253685 TCAACGAGATGCTTTTCTTAGGG 58.746 43.478 0.00 0.00 0.00 3.53
3672 4903 6.758886 AGTATCAACGAGATGCTTTTCTTAGG 59.241 38.462 7.22 0.00 45.94 2.69
3673 4904 7.763172 AGTATCAACGAGATGCTTTTCTTAG 57.237 36.000 7.22 0.00 45.94 2.18
3674 4905 9.464714 GATAGTATCAACGAGATGCTTTTCTTA 57.535 33.333 15.25 1.62 45.94 2.10
3675 4906 7.981789 TGATAGTATCAACGAGATGCTTTTCTT 59.018 33.333 10.50 0.00 45.94 2.52
3676 4907 7.492524 TGATAGTATCAACGAGATGCTTTTCT 58.507 34.615 10.50 3.17 45.94 2.52
3677 4908 7.700322 TGATAGTATCAACGAGATGCTTTTC 57.300 36.000 10.50 13.23 45.94 2.29
3741 4976 0.029834 CGCACAGCTGAAGCAAAAGT 59.970 50.000 23.35 0.00 45.16 2.66
3790 5025 6.139679 ACCTGGAAAAGACCATATTTCTCA 57.860 37.500 0.00 0.00 39.34 3.27
3843 5078 6.876257 ACAGAAGTTATGTGGAGAAAGCTTAG 59.124 38.462 1.52 0.00 0.00 2.18
3847 5082 5.288543 CACAGAAGTTATGTGGAGAAAGC 57.711 43.478 20.51 0.00 43.47 3.51
3873 5120 0.613260 ATAAGGCGCCTGTCAAGACA 59.387 50.000 33.60 8.20 39.32 3.41
3928 5175 1.064296 CTCTACGATGTCGGCGCTT 59.936 57.895 7.64 0.00 44.95 4.68
4090 5338 8.504005 GCAGCGAATATAATTTACACCTTACAT 58.496 33.333 0.00 0.00 0.00 2.29
4091 5339 7.496263 TGCAGCGAATATAATTTACACCTTACA 59.504 33.333 0.00 0.00 0.00 2.41
4092 5340 7.857569 TGCAGCGAATATAATTTACACCTTAC 58.142 34.615 0.00 0.00 0.00 2.34
4133 5382 7.340487 TCAGATTCAGTGTCTCTTAGATAGCAA 59.660 37.037 0.00 0.00 0.00 3.91
4134 5383 6.830838 TCAGATTCAGTGTCTCTTAGATAGCA 59.169 38.462 0.00 0.00 0.00 3.49
4135 5384 7.270757 TCAGATTCAGTGTCTCTTAGATAGC 57.729 40.000 0.00 0.00 0.00 2.97
4136 5385 7.522073 GCCTCAGATTCAGTGTCTCTTAGATAG 60.522 44.444 7.19 0.00 0.00 2.08
4137 5386 6.264292 GCCTCAGATTCAGTGTCTCTTAGATA 59.736 42.308 7.19 0.00 0.00 1.98
4146 5395 0.247736 ACGGCCTCAGATTCAGTGTC 59.752 55.000 0.00 0.00 0.00 3.67
4156 5405 3.056465 AGTTCTCTTTTCTACGGCCTCAG 60.056 47.826 0.00 0.00 0.00 3.35
4173 5422 4.351874 TCCGTTTCTGGATTTCAGTTCT 57.648 40.909 0.00 0.00 43.76 3.01
4177 5426 4.319177 AGACTTCCGTTTCTGGATTTCAG 58.681 43.478 0.00 0.00 44.68 3.02
4179 5428 4.515567 ACAAGACTTCCGTTTCTGGATTTC 59.484 41.667 0.00 0.00 38.00 2.17
4191 5440 3.303132 CCGTGAAAGAAACAAGACTTCCG 60.303 47.826 0.00 0.00 0.00 4.30
4194 5443 3.881220 TCCCGTGAAAGAAACAAGACTT 58.119 40.909 0.00 0.00 0.00 3.01
4220 5472 0.943835 TGATGTTCGGCGTCAGTGTG 60.944 55.000 6.85 0.00 38.14 3.82
4221 5473 0.249699 TTGATGTTCGGCGTCAGTGT 60.250 50.000 6.85 0.00 43.29 3.55
4222 5474 0.865111 TTTGATGTTCGGCGTCAGTG 59.135 50.000 6.85 0.00 43.29 3.66
4223 5475 1.263217 GTTTTGATGTTCGGCGTCAGT 59.737 47.619 6.85 0.00 43.29 3.41
4224 5476 1.721489 CGTTTTGATGTTCGGCGTCAG 60.721 52.381 6.85 0.00 43.29 3.51
4225 5477 0.233590 CGTTTTGATGTTCGGCGTCA 59.766 50.000 6.85 8.42 41.04 4.35
4226 5478 0.452122 CCGTTTTGATGTTCGGCGTC 60.452 55.000 6.85 2.07 36.68 5.19
4227 5479 1.572447 CCGTTTTGATGTTCGGCGT 59.428 52.632 6.85 0.00 36.68 5.68
4228 5480 1.154301 CCCGTTTTGATGTTCGGCG 60.154 57.895 0.00 0.00 41.38 6.46
4229 5481 0.168128 CTCCCGTTTTGATGTTCGGC 59.832 55.000 0.00 0.00 41.38 5.54
4250 5502 0.755327 GTTGGACAGCTTGGTTGGGT 60.755 55.000 0.00 0.00 0.00 4.51
4272 5524 2.214122 TATCCTCGACCCACGACCCA 62.214 60.000 0.00 0.00 46.45 4.51
4273 5525 1.454479 TATCCTCGACCCACGACCC 60.454 63.158 0.00 0.00 46.45 4.46
4274 5526 1.033746 TGTATCCTCGACCCACGACC 61.034 60.000 0.00 0.00 46.45 4.79
4275 5527 0.813184 TTGTATCCTCGACCCACGAC 59.187 55.000 0.00 0.00 46.45 4.34
4277 5529 1.203994 AGTTTGTATCCTCGACCCACG 59.796 52.381 0.00 0.00 44.09 4.94
4278 5530 2.618053 CAGTTTGTATCCTCGACCCAC 58.382 52.381 0.00 0.00 0.00 4.61
4279 5531 1.553248 CCAGTTTGTATCCTCGACCCA 59.447 52.381 0.00 0.00 0.00 4.51
4286 5538 0.034089 GCTGGGCCAGTTTGTATCCT 60.034 55.000 32.80 0.00 33.43 3.24
4288 5540 0.676782 ACGCTGGGCCAGTTTGTATC 60.677 55.000 32.80 14.50 33.43 2.24
4289 5541 0.616371 TACGCTGGGCCAGTTTGTAT 59.384 50.000 32.80 15.19 33.43 2.29
4290 5542 0.320946 GTACGCTGGGCCAGTTTGTA 60.321 55.000 32.80 26.99 33.43 2.41
4297 5549 2.283604 TGAGAGTACGCTGGGCCA 60.284 61.111 5.85 5.85 0.00 5.36
4304 5556 1.131504 CTGAGACCACTGAGAGTACGC 59.868 57.143 0.00 0.00 28.96 4.42
4314 5566 1.460305 AGTGCCCACTGAGACCACT 60.460 57.895 0.00 0.00 40.75 4.00
4353 5605 1.310933 GCAGAAGATGGTGGCAGTGG 61.311 60.000 0.00 0.00 0.00 4.00
4355 5607 1.001641 GGCAGAAGATGGTGGCAGT 60.002 57.895 0.00 0.00 39.03 4.40
4357 5609 1.913951 ATCGGCAGAAGATGGTGGCA 61.914 55.000 0.00 0.00 39.14 4.92
4359 5611 0.533755 GGATCGGCAGAAGATGGTGG 60.534 60.000 0.00 0.00 0.00 4.61
4360 5612 0.533755 GGGATCGGCAGAAGATGGTG 60.534 60.000 0.00 0.00 0.00 4.17
4370 5622 0.537188 GTTCTGAAGAGGGATCGGCA 59.463 55.000 0.00 0.00 0.00 5.69
4371 5623 0.827368 AGTTCTGAAGAGGGATCGGC 59.173 55.000 0.00 0.00 0.00 5.54
4401 5653 1.228862 AGGCCCGGCAAAGTCAATT 60.229 52.632 12.58 0.00 0.00 2.32
4427 5688 1.070758 AGATGTTGTTGTCTGGCGTCT 59.929 47.619 0.00 0.00 0.00 4.18
4430 5691 0.798776 GGAGATGTTGTTGTCTGGCG 59.201 55.000 0.00 0.00 0.00 5.69
4435 5696 2.000447 GCGTAGGGAGATGTTGTTGTC 59.000 52.381 0.00 0.00 0.00 3.18
4441 5702 1.202417 CGACATGCGTAGGGAGATGTT 60.202 52.381 0.00 0.00 34.64 2.71
4442 5703 0.385751 CGACATGCGTAGGGAGATGT 59.614 55.000 0.00 0.00 34.64 3.06
4445 5706 0.952280 GATCGACATGCGTAGGGAGA 59.048 55.000 8.91 0.00 41.80 3.71
4448 5709 1.670087 GGATGATCGACATGCGTAGGG 60.670 57.143 8.91 0.00 39.56 3.53
4456 5717 0.036952 GGATGCGGGATGATCGACAT 60.037 55.000 0.00 0.00 42.47 3.06
4465 5726 2.104572 CTCGGTGATGGATGCGGGAT 62.105 60.000 0.00 0.00 0.00 3.85
4469 5730 1.592669 GGTCTCGGTGATGGATGCG 60.593 63.158 0.00 0.00 0.00 4.73
4479 5740 0.111832 TGACACAGTAGGGTCTCGGT 59.888 55.000 0.00 0.00 35.11 4.69
4490 5751 1.375140 CTCAGCGGCATGACACAGT 60.375 57.895 0.00 0.00 0.00 3.55
4492 5753 0.250252 TTTCTCAGCGGCATGACACA 60.250 50.000 0.00 0.00 0.00 3.72
4493 5754 0.166814 GTTTCTCAGCGGCATGACAC 59.833 55.000 0.00 0.00 0.00 3.67
4494 5755 1.291184 CGTTTCTCAGCGGCATGACA 61.291 55.000 0.00 0.00 0.00 3.58
4496 5757 2.390599 GCGTTTCTCAGCGGCATGA 61.391 57.895 1.45 2.37 0.00 3.07
4503 5764 3.491652 GGAGCGGCGTTTCTCAGC 61.492 66.667 9.37 0.00 0.00 4.26
4504 5765 1.021390 ATTGGAGCGGCGTTTCTCAG 61.021 55.000 9.37 0.00 0.00 3.35
4505 5766 1.003839 ATTGGAGCGGCGTTTCTCA 60.004 52.632 9.37 4.91 0.00 3.27
4506 5767 1.425428 CATTGGAGCGGCGTTTCTC 59.575 57.895 9.37 6.61 0.00 2.87
4510 5771 3.434319 CAGCATTGGAGCGGCGTT 61.434 61.111 9.37 0.48 40.15 4.84
4511 5772 3.899981 TTCAGCATTGGAGCGGCGT 62.900 57.895 9.37 0.00 40.15 5.68
4513 5774 1.153958 GTTTCAGCATTGGAGCGGC 60.154 57.895 0.00 0.00 40.15 6.53
4514 5775 1.243342 TGGTTTCAGCATTGGAGCGG 61.243 55.000 0.00 0.00 40.15 5.52
4522 5786 1.076024 ACTGGTGGATGGTTTCAGCAT 59.924 47.619 0.00 0.00 40.03 3.79
4523 5787 0.478072 ACTGGTGGATGGTTTCAGCA 59.522 50.000 0.00 0.00 38.79 4.41
4531 5795 0.254178 CTCAAGGGACTGGTGGATGG 59.746 60.000 0.00 0.00 40.86 3.51
4533 5797 1.566298 GGCTCAAGGGACTGGTGGAT 61.566 60.000 0.00 0.00 40.86 3.41
4539 5803 0.250234 TTCATCGGCTCAAGGGACTG 59.750 55.000 0.00 0.00 40.86 3.51
4547 5811 1.847328 TAGAGGTGTTCATCGGCTCA 58.153 50.000 0.00 0.00 0.00 4.26
4548 5812 2.427453 TCTTAGAGGTGTTCATCGGCTC 59.573 50.000 0.00 0.00 0.00 4.70
4555 5819 4.523173 AGACGTCATTCTTAGAGGTGTTCA 59.477 41.667 19.50 0.00 34.59 3.18
4565 5829 1.475280 CCCGTGGAGACGTCATTCTTA 59.525 52.381 19.50 0.00 44.54 2.10
4578 5842 3.235481 TGCCGTTTCTCCCGTGGA 61.235 61.111 0.00 0.00 0.00 4.02
4583 5847 1.648467 GCTCATGTGCCGTTTCTCCC 61.648 60.000 8.59 0.00 0.00 4.30
4584 5848 1.796796 GCTCATGTGCCGTTTCTCC 59.203 57.895 8.59 0.00 0.00 3.71
4595 5859 3.762429 ATGATGGCGGCGCTCATGT 62.762 57.895 30.73 19.84 0.00 3.21
4601 5865 3.300667 GATCGAATGATGGCGGCGC 62.301 63.158 26.17 26.17 34.09 6.53
4603 5867 0.040958 GTTGATCGAATGATGGCGGC 60.041 55.000 0.00 0.00 34.09 6.53
4605 5869 2.204237 TCAGTTGATCGAATGATGGCG 58.796 47.619 9.03 0.00 34.09 5.69
4606 5870 4.401525 GATCAGTTGATCGAATGATGGC 57.598 45.455 26.45 12.19 41.15 4.40
4661 5926 1.069204 GGCATCATCGAGGTGAAGCTA 59.931 52.381 13.94 0.00 41.26 3.32
4690 5963 4.393155 ATGGCGACGCTCTTGGCA 62.393 61.111 20.77 8.27 42.93 4.92
4692 5965 2.125552 TGATGGCGACGCTCTTGG 60.126 61.111 20.77 0.00 0.00 3.61
4697 5970 3.649277 GACCAGTGATGGCGACGCT 62.649 63.158 20.77 0.00 0.00 5.07
4734 6020 3.511477 GGAATCTAGTGGGGCAGATCTA 58.489 50.000 0.00 0.00 31.10 1.98
4744 6030 5.039920 TGATGTCAATGGGAATCTAGTGG 57.960 43.478 0.00 0.00 0.00 4.00
4748 6034 4.823442 GCACATGATGTCAATGGGAATCTA 59.177 41.667 0.00 0.00 0.00 1.98
4756 6042 1.202211 CCGGTGCACATGATGTCAATG 60.202 52.381 20.43 0.00 0.00 2.82
4758 6044 0.250684 ACCGGTGCACATGATGTCAA 60.251 50.000 20.43 0.00 0.00 3.18
4759 6045 0.673333 GACCGGTGCACATGATGTCA 60.673 55.000 14.63 0.00 0.00 3.58
4760 6046 0.673333 TGACCGGTGCACATGATGTC 60.673 55.000 14.63 15.98 0.00 3.06
4763 6049 0.391661 GTCTGACCGGTGCACATGAT 60.392 55.000 14.63 0.00 0.00 2.45
4766 6052 0.246635 GTAGTCTGACCGGTGCACAT 59.753 55.000 14.63 2.76 0.00 3.21
4774 6060 3.256136 AGACTTTGAAGGTAGTCTGACCG 59.744 47.826 3.76 0.00 46.93 4.79
4783 6069 9.436957 GTGAATAAATCTGAGACTTTGAAGGTA 57.563 33.333 0.00 0.00 0.00 3.08
4794 6080 7.004691 TCGGATCTAGGTGAATAAATCTGAGA 58.995 38.462 0.00 0.00 0.00 3.27
4796 6082 6.294010 CGTCGGATCTAGGTGAATAAATCTGA 60.294 42.308 0.00 0.00 0.00 3.27
4802 6088 4.458397 AGTCGTCGGATCTAGGTGAATAA 58.542 43.478 0.00 0.00 0.00 1.40
4804 6090 2.933573 AGTCGTCGGATCTAGGTGAAT 58.066 47.619 0.00 0.00 0.00 2.57
4805 6091 2.414994 AGTCGTCGGATCTAGGTGAA 57.585 50.000 0.00 0.00 0.00 3.18
4806 6092 2.484417 GGTAGTCGTCGGATCTAGGTGA 60.484 54.545 0.00 0.00 0.00 4.02
4808 6094 1.767681 AGGTAGTCGTCGGATCTAGGT 59.232 52.381 0.00 0.00 0.00 3.08
4818 6104 7.829378 ACTTTCATTTGAATAGGTAGTCGTC 57.171 36.000 0.00 0.00 33.54 4.20
4819 6105 8.617290 AAACTTTCATTTGAATAGGTAGTCGT 57.383 30.769 0.00 0.00 33.54 4.34
4820 6106 8.717821 TGAAACTTTCATTTGAATAGGTAGTCG 58.282 33.333 0.00 0.00 34.08 4.18
4836 6122 9.687210 CTCTCATTTTTCATCATGAAACTTTCA 57.313 29.630 12.58 6.67 45.03 2.69
4837 6123 9.136952 CCTCTCATTTTTCATCATGAAACTTTC 57.863 33.333 12.58 0.00 45.03 2.62
4838 6124 7.601508 GCCTCTCATTTTTCATCATGAAACTTT 59.398 33.333 12.58 0.00 45.03 2.66
4839 6125 7.095270 GCCTCTCATTTTTCATCATGAAACTT 58.905 34.615 12.58 0.45 45.03 2.66
4840 6126 6.624423 CGCCTCTCATTTTTCATCATGAAACT 60.624 38.462 12.58 0.63 45.03 2.66
4841 6127 5.514204 CGCCTCTCATTTTTCATCATGAAAC 59.486 40.000 12.58 0.00 45.03 2.78
4842 6128 5.183713 ACGCCTCTCATTTTTCATCATGAAA 59.816 36.000 8.85 8.85 43.84 2.69
4843 6129 4.701651 ACGCCTCTCATTTTTCATCATGAA 59.298 37.500 0.00 0.00 34.03 2.57
4844 6130 4.264253 ACGCCTCTCATTTTTCATCATGA 58.736 39.130 0.00 0.00 0.00 3.07
4845 6131 4.627611 ACGCCTCTCATTTTTCATCATG 57.372 40.909 0.00 0.00 0.00 3.07
4846 6132 5.649782 AAACGCCTCTCATTTTTCATCAT 57.350 34.783 0.00 0.00 0.00 2.45
4847 6133 5.452078 AAAACGCCTCTCATTTTTCATCA 57.548 34.783 0.00 0.00 0.00 3.07
4848 6134 5.119125 CCAAAAACGCCTCTCATTTTTCATC 59.881 40.000 0.00 0.00 34.19 2.92
4849 6135 4.990426 CCAAAAACGCCTCTCATTTTTCAT 59.010 37.500 0.00 0.00 34.19 2.57
4850 6136 4.098654 TCCAAAAACGCCTCTCATTTTTCA 59.901 37.500 0.00 0.00 34.19 2.69
4851 6137 4.616953 TCCAAAAACGCCTCTCATTTTTC 58.383 39.130 0.00 0.00 34.19 2.29
4852 6138 4.664150 TCCAAAAACGCCTCTCATTTTT 57.336 36.364 0.00 0.00 36.26 1.94
4853 6139 4.664150 TTCCAAAAACGCCTCTCATTTT 57.336 36.364 0.00 0.00 0.00 1.82
4854 6140 4.871933 ATTCCAAAAACGCCTCTCATTT 57.128 36.364 0.00 0.00 0.00 2.32
4855 6141 4.142381 GCTATTCCAAAAACGCCTCTCATT 60.142 41.667 0.00 0.00 0.00 2.57
4856 6142 3.378427 GCTATTCCAAAAACGCCTCTCAT 59.622 43.478 0.00 0.00 0.00 2.90
4857 6143 2.747446 GCTATTCCAAAAACGCCTCTCA 59.253 45.455 0.00 0.00 0.00 3.27
4858 6144 2.223044 CGCTATTCCAAAAACGCCTCTC 60.223 50.000 0.00 0.00 0.00 3.20
4859 6145 1.737793 CGCTATTCCAAAAACGCCTCT 59.262 47.619 0.00 0.00 0.00 3.69
4860 6146 1.202143 CCGCTATTCCAAAAACGCCTC 60.202 52.381 0.00 0.00 0.00 4.70
4861 6147 0.808755 CCGCTATTCCAAAAACGCCT 59.191 50.000 0.00 0.00 0.00 5.52
4862 6148 0.806241 TCCGCTATTCCAAAAACGCC 59.194 50.000 0.00 0.00 0.00 5.68
4863 6149 1.202143 CCTCCGCTATTCCAAAAACGC 60.202 52.381 0.00 0.00 0.00 4.84
4864 6150 1.202143 GCCTCCGCTATTCCAAAAACG 60.202 52.381 0.00 0.00 0.00 3.60
4865 6151 1.134367 GGCCTCCGCTATTCCAAAAAC 59.866 52.381 0.00 0.00 34.44 2.43
4866 6152 1.005450 AGGCCTCCGCTATTCCAAAAA 59.995 47.619 0.00 0.00 34.44 1.94
4867 6153 0.623723 AGGCCTCCGCTATTCCAAAA 59.376 50.000 0.00 0.00 34.44 2.44
4868 6154 0.623723 AAGGCCTCCGCTATTCCAAA 59.376 50.000 5.23 0.00 34.44 3.28
4869 6155 0.107214 CAAGGCCTCCGCTATTCCAA 60.107 55.000 5.23 0.00 34.44 3.53
4870 6156 1.526887 CAAGGCCTCCGCTATTCCA 59.473 57.895 5.23 0.00 34.44 3.53
4871 6157 1.894282 GCAAGGCCTCCGCTATTCC 60.894 63.158 17.74 0.00 34.44 3.01
4872 6158 1.153168 TGCAAGGCCTCCGCTATTC 60.153 57.895 23.47 0.00 34.44 1.75
4873 6159 1.153086 CTGCAAGGCCTCCGCTATT 60.153 57.895 23.47 0.00 34.44 1.73
4874 6160 2.066393 TCTGCAAGGCCTCCGCTAT 61.066 57.895 23.47 0.00 34.44 2.97
4875 6161 2.683572 TCTGCAAGGCCTCCGCTA 60.684 61.111 23.47 12.01 34.44 4.26
4876 6162 4.400961 GTCTGCAAGGCCTCCGCT 62.401 66.667 23.47 0.00 26.76 5.52
4877 6163 3.909086 AAGTCTGCAAGGCCTCCGC 62.909 63.158 18.09 18.09 41.78 5.54
4878 6164 2.037136 CAAGTCTGCAAGGCCTCCG 61.037 63.158 5.23 0.58 41.78 4.63
4879 6165 1.676967 CCAAGTCTGCAAGGCCTCC 60.677 63.158 5.23 0.00 41.78 4.30
4880 6166 2.338785 GCCAAGTCTGCAAGGCCTC 61.339 63.158 5.23 0.00 41.78 4.70
4881 6167 1.492133 TAGCCAAGTCTGCAAGGCCT 61.492 55.000 0.00 0.00 41.78 5.19
4882 6168 0.394899 ATAGCCAAGTCTGCAAGGCC 60.395 55.000 0.00 0.00 41.78 5.19
4884 6170 3.266510 TGTATAGCCAAGTCTGCAAGG 57.733 47.619 0.00 0.00 0.00 3.61
4885 6171 4.993584 CCTATGTATAGCCAAGTCTGCAAG 59.006 45.833 0.00 0.00 0.00 4.01
4886 6172 4.408921 ACCTATGTATAGCCAAGTCTGCAA 59.591 41.667 0.00 0.00 0.00 4.08
4887 6173 3.967326 ACCTATGTATAGCCAAGTCTGCA 59.033 43.478 0.00 0.00 0.00 4.41
4888 6174 4.608948 ACCTATGTATAGCCAAGTCTGC 57.391 45.455 0.00 0.00 0.00 4.26
4889 6175 6.821388 AGAAACCTATGTATAGCCAAGTCTG 58.179 40.000 0.00 0.00 0.00 3.51
4890 6176 7.092846 ACAAGAAACCTATGTATAGCCAAGTCT 60.093 37.037 0.00 0.00 0.00 3.24
4891 6177 7.048512 ACAAGAAACCTATGTATAGCCAAGTC 58.951 38.462 0.00 0.00 0.00 3.01
4892 6178 6.958767 ACAAGAAACCTATGTATAGCCAAGT 58.041 36.000 0.00 0.00 0.00 3.16
4893 6179 7.865706 AACAAGAAACCTATGTATAGCCAAG 57.134 36.000 0.00 0.00 0.00 3.61
4894 6180 9.742144 TTTAACAAGAAACCTATGTATAGCCAA 57.258 29.630 0.00 0.00 0.00 4.52
4895 6181 9.914834 ATTTAACAAGAAACCTATGTATAGCCA 57.085 29.630 0.00 0.00 0.00 4.75
4934 6220 9.289303 CAAGCAAGCGAATAAAGTATAATTTGT 57.711 29.630 8.37 0.00 0.00 2.83
4935 6221 9.502145 TCAAGCAAGCGAATAAAGTATAATTTG 57.498 29.630 8.37 0.00 0.00 2.32
4936 6222 9.722056 CTCAAGCAAGCGAATAAAGTATAATTT 57.278 29.630 3.38 3.38 0.00 1.82
4937 6223 9.109393 TCTCAAGCAAGCGAATAAAGTATAATT 57.891 29.630 0.00 0.00 0.00 1.40
4938 6224 8.552034 GTCTCAAGCAAGCGAATAAAGTATAAT 58.448 33.333 0.00 0.00 0.00 1.28
4939 6225 7.547722 TGTCTCAAGCAAGCGAATAAAGTATAA 59.452 33.333 0.00 0.00 0.00 0.98
4940 6226 7.039270 TGTCTCAAGCAAGCGAATAAAGTATA 58.961 34.615 0.00 0.00 0.00 1.47
4941 6227 5.874810 TGTCTCAAGCAAGCGAATAAAGTAT 59.125 36.000 0.00 0.00 0.00 2.12
4942 6228 5.234752 TGTCTCAAGCAAGCGAATAAAGTA 58.765 37.500 0.00 0.00 0.00 2.24
4943 6229 4.065088 TGTCTCAAGCAAGCGAATAAAGT 58.935 39.130 0.00 0.00 0.00 2.66
4944 6230 4.436584 CCTGTCTCAAGCAAGCGAATAAAG 60.437 45.833 0.00 0.00 0.00 1.85
4945 6231 3.436704 CCTGTCTCAAGCAAGCGAATAAA 59.563 43.478 0.00 0.00 0.00 1.40
4946 6232 3.002791 CCTGTCTCAAGCAAGCGAATAA 58.997 45.455 0.00 0.00 0.00 1.40
4947 6233 2.028112 ACCTGTCTCAAGCAAGCGAATA 60.028 45.455 0.00 0.00 0.00 1.75
4948 6234 1.271054 ACCTGTCTCAAGCAAGCGAAT 60.271 47.619 0.00 0.00 0.00 3.34
4949 6235 0.106708 ACCTGTCTCAAGCAAGCGAA 59.893 50.000 0.00 0.00 0.00 4.70
4950 6236 0.966179 TACCTGTCTCAAGCAAGCGA 59.034 50.000 0.00 0.00 0.00 4.93
4951 6237 1.067565 TCTACCTGTCTCAAGCAAGCG 60.068 52.381 0.00 0.00 0.00 4.68
4952 6238 2.232452 TCTCTACCTGTCTCAAGCAAGC 59.768 50.000 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.