Multiple sequence alignment - TraesCS7A01G277600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G277600 chr7A 100.000 4849 0 0 1642 6490 291803309 291798461 0.000000e+00 8955.0
1 TraesCS7A01G277600 chr7A 100.000 1435 0 0 1 1435 291804950 291803516 0.000000e+00 2651.0
2 TraesCS7A01G277600 chr7B 91.676 2571 93 46 3951 6428 246507278 246504736 0.000000e+00 3450.0
3 TraesCS7A01G277600 chr7B 98.881 1609 18 0 2327 3935 695448283 695449891 0.000000e+00 2872.0
4 TraesCS7A01G277600 chr7B 98.590 1560 21 1 2376 3935 654250306 654248748 0.000000e+00 2758.0
5 TraesCS7A01G277600 chr7B 93.875 751 31 6 4370 5110 325847501 325848246 0.000000e+00 1118.0
6 TraesCS7A01G277600 chr7B 86.694 962 44 32 505 1434 246509028 246508119 0.000000e+00 990.0
7 TraesCS7A01G277600 chr7B 90.000 300 8 4 1987 2286 246507561 246507284 1.030000e-97 368.0
8 TraesCS7A01G277600 chr7B 92.337 261 10 6 1642 1895 246507829 246507572 4.780000e-96 363.0
9 TraesCS7A01G277600 chr7B 87.302 63 8 0 48 110 564601123 564601061 9.030000e-09 73.1
10 TraesCS7A01G277600 chr6B 99.628 1611 6 0 2325 3935 696347302 696345692 0.000000e+00 2942.0
11 TraesCS7A01G277600 chr6B 94.595 74 4 0 1918 1991 644471248 644471175 1.480000e-21 115.0
12 TraesCS7A01G277600 chr6B 81.818 110 18 2 1 110 71875356 71875249 2.490000e-14 91.6
13 TraesCS7A01G277600 chr3A 98.695 1609 21 0 2327 3935 648241021 648239413 0.000000e+00 2856.0
14 TraesCS7A01G277600 chr3A 100.000 72 0 0 1917 1988 467353231 467353302 4.080000e-27 134.0
15 TraesCS7A01G277600 chr4B 98.513 1614 24 0 2328 3941 662784086 662785699 0.000000e+00 2848.0
16 TraesCS7A01G277600 chr4B 80.753 239 44 2 5195 5432 7043828 7043591 1.110000e-42 185.0
17 TraesCS7A01G277600 chr4A 98.451 1614 23 2 2327 3940 629116761 629118372 0.000000e+00 2841.0
18 TraesCS7A01G277600 chr4A 81.919 271 43 6 5165 5432 599321217 599321484 2.350000e-54 224.0
19 TraesCS7A01G277600 chr4A 89.552 67 6 1 1923 1988 699617578 699617512 4.170000e-12 84.2
20 TraesCS7A01G277600 chr6D 97.039 1621 32 9 2327 3939 12345726 12347338 0.000000e+00 2713.0
21 TraesCS7A01G277600 chr6D 87.273 110 14 0 1 110 460358373 460358482 6.830000e-25 126.0
22 TraesCS7A01G277600 chr6D 80.864 162 20 2 242 392 462227592 462227753 4.110000e-22 117.0
23 TraesCS7A01G277600 chr6A 96.636 1605 27 6 2332 3935 9487311 9488889 0.000000e+00 2639.0
24 TraesCS7A01G277600 chr5B 96.280 1613 33 6 2324 3935 30697028 30698614 0.000000e+00 2621.0
25 TraesCS7A01G277600 chr5B 93.289 447 20 4 4370 4806 280175625 280176071 0.000000e+00 651.0
26 TraesCS7A01G277600 chr5B 94.444 270 11 2 4841 5110 280176069 280176334 4.680000e-111 412.0
27 TraesCS7A01G277600 chr7D 96.258 1149 27 10 4552 5695 266388258 266387121 0.000000e+00 1869.0
28 TraesCS7A01G277600 chr7D 90.794 945 36 15 503 1435 266390483 266389578 0.000000e+00 1216.0
29 TraesCS7A01G277600 chr7D 92.846 671 23 8 3951 4600 266388976 266388310 0.000000e+00 950.0
30 TraesCS7A01G277600 chr7D 86.549 736 36 29 5707 6428 266386632 266385946 0.000000e+00 752.0
31 TraesCS7A01G277600 chr7D 91.506 518 31 3 3443 3947 637803873 637804390 0.000000e+00 701.0
32 TraesCS7A01G277600 chr7D 94.928 276 13 1 1642 1917 266389548 266389274 1.290000e-116 431.0
33 TraesCS7A01G277600 chr7D 91.060 302 16 8 1987 2286 266389274 266388982 1.310000e-106 398.0
34 TraesCS7A01G277600 chr7D 100.000 49 0 0 4552 4600 266388308 266388260 2.490000e-14 91.6
35 TraesCS7A01G277600 chr7D 92.063 63 5 0 6428 6490 266383944 266383882 8.960000e-14 89.8
36 TraesCS7A01G277600 chr7D 87.500 64 8 0 1919 1982 630839821 630839758 2.510000e-09 75.0
37 TraesCS7A01G277600 chrUn 98.921 278 2 1 3663 3940 425668010 425667734 4.520000e-136 496.0
38 TraesCS7A01G277600 chrUn 85.484 124 11 6 6173 6290 171028596 171028474 8.840000e-24 122.0
39 TraesCS7A01G277600 chrUn 85.484 124 11 6 6173 6290 393080730 393080852 8.840000e-24 122.0
40 TraesCS7A01G277600 chrUn 85.484 124 11 6 6173 6290 458305253 458305131 8.840000e-24 122.0
41 TraesCS7A01G277600 chr4D 82.845 239 39 2 5195 5432 4358483 4358246 5.100000e-51 213.0
42 TraesCS7A01G277600 chr4D 89.091 110 12 0 1 110 497281787 497281896 3.160000e-28 137.0
43 TraesCS7A01G277600 chr1B 85.600 125 9 5 6173 6290 338902632 338902754 8.840000e-24 122.0
44 TraesCS7A01G277600 chr1D 84.677 124 11 7 6173 6290 141335511 141335632 4.110000e-22 117.0
45 TraesCS7A01G277600 chr1D 84.677 124 12 6 6173 6290 185754207 185754085 4.110000e-22 117.0
46 TraesCS7A01G277600 chr1D 88.060 67 8 0 1916 1982 9414113 9414047 5.390000e-11 80.5
47 TraesCS7A01G277600 chr1A 97.101 69 2 0 6222 6290 115744723 115744791 4.110000e-22 117.0
48 TraesCS7A01G277600 chr2B 85.185 108 14 2 1 107 788688276 788688382 6.880000e-20 110.0
49 TraesCS7A01G277600 chr2B 82.979 94 16 0 256 349 800066216 800066309 1.160000e-12 86.1
50 TraesCS7A01G277600 chr5A 95.000 60 3 0 1932 1991 688357742 688357683 1.930000e-15 95.3
51 TraesCS7A01G277600 chr5D 86.957 69 9 0 1914 1982 486565331 486565399 1.940000e-10 78.7
52 TraesCS7A01G277600 chr3B 100.000 29 0 0 5460 5488 31412624 31412596 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G277600 chr7A 291798461 291804950 6489 True 5803.000 8955 100.00000 1 6490 2 chr7A.!!$R1 6489
1 TraesCS7A01G277600 chr7B 695448283 695449891 1608 False 2872.000 2872 98.88100 2327 3935 1 chr7B.!!$F2 1608
2 TraesCS7A01G277600 chr7B 654248748 654250306 1558 True 2758.000 2758 98.59000 2376 3935 1 chr7B.!!$R2 1559
3 TraesCS7A01G277600 chr7B 246504736 246509028 4292 True 1292.750 3450 90.17675 505 6428 4 chr7B.!!$R3 5923
4 TraesCS7A01G277600 chr7B 325847501 325848246 745 False 1118.000 1118 93.87500 4370 5110 1 chr7B.!!$F1 740
5 TraesCS7A01G277600 chr6B 696345692 696347302 1610 True 2942.000 2942 99.62800 2325 3935 1 chr6B.!!$R3 1610
6 TraesCS7A01G277600 chr3A 648239413 648241021 1608 True 2856.000 2856 98.69500 2327 3935 1 chr3A.!!$R1 1608
7 TraesCS7A01G277600 chr4B 662784086 662785699 1613 False 2848.000 2848 98.51300 2328 3941 1 chr4B.!!$F1 1613
8 TraesCS7A01G277600 chr4A 629116761 629118372 1611 False 2841.000 2841 98.45100 2327 3940 1 chr4A.!!$F2 1613
9 TraesCS7A01G277600 chr6D 12345726 12347338 1612 False 2713.000 2713 97.03900 2327 3939 1 chr6D.!!$F1 1612
10 TraesCS7A01G277600 chr6A 9487311 9488889 1578 False 2639.000 2639 96.63600 2332 3935 1 chr6A.!!$F1 1603
11 TraesCS7A01G277600 chr5B 30697028 30698614 1586 False 2621.000 2621 96.28000 2324 3935 1 chr5B.!!$F1 1611
12 TraesCS7A01G277600 chr5B 280175625 280176334 709 False 531.500 651 93.86650 4370 5110 2 chr5B.!!$F2 740
13 TraesCS7A01G277600 chr7D 266383882 266390483 6601 True 724.675 1869 93.06225 503 6490 8 chr7D.!!$R2 5987
14 TraesCS7A01G277600 chr7D 637803873 637804390 517 False 701.000 701 91.50600 3443 3947 1 chr7D.!!$F1 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 377 0.032403 TCTACCGTCACAAACCGTGG 59.968 55.000 0.0 0.0 46.36 4.94 F
405 406 0.032952 GTTATACCATGCCGCCGAGA 59.967 55.000 0.0 0.0 0.00 4.04 F
412 413 0.249447 CATGCCGCCGAGAACTATGA 60.249 55.000 0.0 0.0 0.00 2.15 F
2302 2454 0.035630 CTGAGGAGGCCCAGAAACAG 60.036 60.000 0.0 0.0 32.37 3.16 F
2306 2458 0.827507 GGAGGCCCAGAAACAGCAAA 60.828 55.000 0.0 0.0 0.00 3.68 F
2307 2459 1.039856 GAGGCCCAGAAACAGCAAAA 58.960 50.000 0.0 0.0 0.00 2.44 F
2308 2460 1.412343 GAGGCCCAGAAACAGCAAAAA 59.588 47.619 0.0 0.0 0.00 1.94 F
2309 2461 2.037641 GAGGCCCAGAAACAGCAAAAAT 59.962 45.455 0.0 0.0 0.00 1.82 F
2310 2462 2.439135 AGGCCCAGAAACAGCAAAAATT 59.561 40.909 0.0 0.0 0.00 1.82 F
4338 4516 2.877043 AGCAGCAAAGAAACACCAAG 57.123 45.000 0.0 0.0 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 2102 0.036388 ATCCGATGCGTTGGTTCACT 60.036 50.000 12.17 0.0 0.00 3.41 R
1971 2112 0.096976 GTGTTGGTCAATCCGATGCG 59.903 55.000 0.00 0.0 39.52 4.73 R
2316 2468 0.103937 CAGAGGAGGGATGACTTCGC 59.896 60.000 0.00 0.0 37.56 4.70 R
4065 4234 1.946768 CTCCTTGAACGCCAAAGTCAA 59.053 47.619 0.00 0.0 33.76 3.18 R
4225 4394 7.128331 CCATAGTGACATCGAAATTGTTGATC 58.872 38.462 0.00 0.0 0.00 2.92 R
4338 4516 4.097437 TCCATGTGTGTAAGTATCGAGACC 59.903 45.833 6.56 0.0 0.00 3.85 R
4368 4546 2.223409 CCCATGTGAGATTGCATCAACG 60.223 50.000 0.00 0.0 0.00 4.10 R
4372 4550 2.353357 TCCCCATGTGAGATTGCATC 57.647 50.000 0.00 0.0 0.00 3.91 R
4386 4564 0.903942 GCAAAAGATGGCATTCCCCA 59.096 50.000 0.00 0.0 39.65 4.96 R
6089 6950 0.321298 TACTCCGCACTTTTCAGGCC 60.321 55.000 0.00 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 9.745018 AATCTATCAATTAATGATCCACCGATT 57.255 29.630 0.00 0.00 45.91 3.34
54 55 8.335532 TCAATTAATGATCCACCGATTAATCC 57.664 34.615 9.87 0.00 33.23 3.01
55 56 7.941790 TCAATTAATGATCCACCGATTAATCCA 59.058 33.333 9.87 0.75 33.23 3.41
56 57 7.928307 ATTAATGATCCACCGATTAATCCAG 57.072 36.000 9.87 4.43 30.00 3.86
57 58 4.982241 ATGATCCACCGATTAATCCAGT 57.018 40.909 9.87 5.05 0.00 4.00
58 59 4.771114 TGATCCACCGATTAATCCAGTT 57.229 40.909 9.87 0.00 0.00 3.16
59 60 5.880164 TGATCCACCGATTAATCCAGTTA 57.120 39.130 9.87 0.02 0.00 2.24
60 61 6.241882 TGATCCACCGATTAATCCAGTTAA 57.758 37.500 9.87 0.00 36.75 2.01
61 62 6.837312 TGATCCACCGATTAATCCAGTTAAT 58.163 36.000 9.87 4.05 43.86 1.40
62 63 7.969004 TGATCCACCGATTAATCCAGTTAATA 58.031 34.615 9.87 0.00 41.82 0.98
63 64 8.433599 TGATCCACCGATTAATCCAGTTAATAA 58.566 33.333 9.87 0.00 41.82 1.40
64 65 8.848474 ATCCACCGATTAATCCAGTTAATAAG 57.152 34.615 9.87 0.00 41.82 1.73
65 66 6.708949 TCCACCGATTAATCCAGTTAATAAGC 59.291 38.462 9.87 0.00 41.82 3.09
66 67 6.072673 CCACCGATTAATCCAGTTAATAAGCC 60.073 42.308 9.87 0.00 41.82 4.35
67 68 5.699458 ACCGATTAATCCAGTTAATAAGCCG 59.301 40.000 9.87 0.00 41.82 5.52
68 69 5.929992 CCGATTAATCCAGTTAATAAGCCGA 59.070 40.000 9.87 0.00 41.82 5.54
69 70 6.594159 CCGATTAATCCAGTTAATAAGCCGAT 59.406 38.462 9.87 0.00 41.82 4.18
70 71 7.119262 CCGATTAATCCAGTTAATAAGCCGATT 59.881 37.037 9.87 0.00 41.82 3.34
71 72 8.169268 CGATTAATCCAGTTAATAAGCCGATTC 58.831 37.037 9.87 0.00 41.82 2.52
72 73 8.918202 ATTAATCCAGTTAATAAGCCGATTCA 57.082 30.769 0.00 0.00 40.38 2.57
73 74 6.619801 AATCCAGTTAATAAGCCGATTCAC 57.380 37.500 0.00 0.00 0.00 3.18
74 75 4.448210 TCCAGTTAATAAGCCGATTCACC 58.552 43.478 0.00 0.00 0.00 4.02
75 76 3.247648 CCAGTTAATAAGCCGATTCACCG 59.752 47.826 0.00 0.00 0.00 4.94
76 77 4.116961 CAGTTAATAAGCCGATTCACCGA 58.883 43.478 0.00 0.00 0.00 4.69
77 78 4.750098 CAGTTAATAAGCCGATTCACCGAT 59.250 41.667 0.00 0.00 0.00 4.18
78 79 5.236478 CAGTTAATAAGCCGATTCACCGATT 59.764 40.000 0.00 0.00 0.00 3.34
79 80 6.422701 CAGTTAATAAGCCGATTCACCGATTA 59.577 38.462 0.00 0.00 0.00 1.75
80 81 6.987992 AGTTAATAAGCCGATTCACCGATTAA 59.012 34.615 0.00 0.00 0.00 1.40
81 82 7.660208 AGTTAATAAGCCGATTCACCGATTAAT 59.340 33.333 0.00 0.00 0.00 1.40
82 83 6.481954 AATAAGCCGATTCACCGATTAATC 57.518 37.500 5.30 5.30 0.00 1.75
95 96 4.710528 CGATTAATCGTTACTCCCAAGC 57.289 45.455 26.11 0.00 44.74 4.01
96 97 3.493503 CGATTAATCGTTACTCCCAAGCC 59.506 47.826 26.11 0.00 44.74 4.35
97 98 3.985019 TTAATCGTTACTCCCAAGCCA 57.015 42.857 0.00 0.00 0.00 4.75
98 99 2.871096 AATCGTTACTCCCAAGCCAA 57.129 45.000 0.00 0.00 0.00 4.52
99 100 2.109425 ATCGTTACTCCCAAGCCAAC 57.891 50.000 0.00 0.00 0.00 3.77
100 101 0.035739 TCGTTACTCCCAAGCCAACC 59.964 55.000 0.00 0.00 0.00 3.77
101 102 1.296056 CGTTACTCCCAAGCCAACCG 61.296 60.000 0.00 0.00 0.00 4.44
102 103 0.035739 GTTACTCCCAAGCCAACCGA 59.964 55.000 0.00 0.00 0.00 4.69
103 104 0.323629 TTACTCCCAAGCCAACCGAG 59.676 55.000 0.00 0.00 0.00 4.63
104 105 2.180159 TACTCCCAAGCCAACCGAGC 62.180 60.000 0.00 0.00 0.00 5.03
105 106 3.551496 CTCCCAAGCCAACCGAGCA 62.551 63.158 0.00 0.00 0.00 4.26
106 107 3.058160 CCCAAGCCAACCGAGCAG 61.058 66.667 0.00 0.00 0.00 4.24
107 108 3.741476 CCAAGCCAACCGAGCAGC 61.741 66.667 0.00 0.00 0.00 5.25
108 109 2.670934 CAAGCCAACCGAGCAGCT 60.671 61.111 0.00 0.00 37.10 4.24
109 110 1.375908 CAAGCCAACCGAGCAGCTA 60.376 57.895 0.00 0.00 34.49 3.32
110 111 0.745845 CAAGCCAACCGAGCAGCTAT 60.746 55.000 0.00 0.00 34.49 2.97
111 112 0.745845 AAGCCAACCGAGCAGCTATG 60.746 55.000 0.00 0.00 34.49 2.23
112 113 1.153369 GCCAACCGAGCAGCTATGA 60.153 57.895 0.00 0.00 0.00 2.15
113 114 1.156645 GCCAACCGAGCAGCTATGAG 61.157 60.000 0.00 0.00 0.00 2.90
114 115 0.531532 CCAACCGAGCAGCTATGAGG 60.532 60.000 0.00 0.00 0.00 3.86
115 116 0.461548 CAACCGAGCAGCTATGAGGA 59.538 55.000 11.39 0.00 0.00 3.71
116 117 1.134699 CAACCGAGCAGCTATGAGGAA 60.135 52.381 11.39 0.00 0.00 3.36
117 118 1.195115 ACCGAGCAGCTATGAGGAAA 58.805 50.000 11.39 0.00 0.00 3.13
118 119 1.134670 ACCGAGCAGCTATGAGGAAAC 60.135 52.381 11.39 0.00 0.00 2.78
119 120 1.134699 CCGAGCAGCTATGAGGAAACA 60.135 52.381 0.00 0.00 0.00 2.83
120 121 2.484417 CCGAGCAGCTATGAGGAAACAT 60.484 50.000 0.00 0.00 0.00 2.71
121 122 3.201290 CGAGCAGCTATGAGGAAACATT 58.799 45.455 0.00 0.00 0.00 2.71
122 123 3.002042 CGAGCAGCTATGAGGAAACATTG 59.998 47.826 0.00 0.00 0.00 2.82
123 124 3.944015 GAGCAGCTATGAGGAAACATTGT 59.056 43.478 0.00 0.00 0.00 2.71
124 125 5.102953 AGCAGCTATGAGGAAACATTGTA 57.897 39.130 0.00 0.00 0.00 2.41
125 126 5.121811 AGCAGCTATGAGGAAACATTGTAG 58.878 41.667 0.00 0.00 0.00 2.74
126 127 4.878397 GCAGCTATGAGGAAACATTGTAGT 59.122 41.667 0.00 0.00 0.00 2.73
127 128 6.049149 GCAGCTATGAGGAAACATTGTAGTA 58.951 40.000 0.00 0.00 0.00 1.82
128 129 6.018669 GCAGCTATGAGGAAACATTGTAGTAC 60.019 42.308 0.00 0.00 0.00 2.73
129 130 6.199154 CAGCTATGAGGAAACATTGTAGTACG 59.801 42.308 0.00 0.00 0.00 3.67
130 131 6.040878 GCTATGAGGAAACATTGTAGTACGT 58.959 40.000 0.00 0.00 0.00 3.57
131 132 6.198591 GCTATGAGGAAACATTGTAGTACGTC 59.801 42.308 0.00 0.00 0.00 4.34
132 133 5.717078 TGAGGAAACATTGTAGTACGTCT 57.283 39.130 0.00 0.00 0.00 4.18
133 134 6.822667 TGAGGAAACATTGTAGTACGTCTA 57.177 37.500 0.00 0.00 0.00 2.59
134 135 7.400599 TGAGGAAACATTGTAGTACGTCTAT 57.599 36.000 0.00 0.00 0.00 1.98
135 136 7.478322 TGAGGAAACATTGTAGTACGTCTATC 58.522 38.462 0.00 0.00 0.00 2.08
136 137 7.121611 TGAGGAAACATTGTAGTACGTCTATCA 59.878 37.037 0.00 0.00 0.00 2.15
137 138 8.008513 AGGAAACATTGTAGTACGTCTATCAT 57.991 34.615 0.00 0.00 0.00 2.45
138 139 8.136165 AGGAAACATTGTAGTACGTCTATCATC 58.864 37.037 0.00 0.00 0.00 2.92
139 140 7.919091 GGAAACATTGTAGTACGTCTATCATCA 59.081 37.037 0.00 0.00 0.00 3.07
140 141 9.464714 GAAACATTGTAGTACGTCTATCATCAT 57.535 33.333 0.00 0.00 0.00 2.45
143 144 8.237949 ACATTGTAGTACGTCTATCATCATAGC 58.762 37.037 0.00 0.00 33.10 2.97
144 145 7.739498 TTGTAGTACGTCTATCATCATAGCA 57.261 36.000 0.00 0.00 33.10 3.49
145 146 7.923414 TGTAGTACGTCTATCATCATAGCAT 57.077 36.000 0.00 0.00 33.10 3.79
146 147 7.752695 TGTAGTACGTCTATCATCATAGCATG 58.247 38.462 0.00 0.00 33.10 4.06
147 148 5.645624 AGTACGTCTATCATCATAGCATGC 58.354 41.667 10.51 10.51 33.10 4.06
148 149 4.525912 ACGTCTATCATCATAGCATGCA 57.474 40.909 21.98 6.36 33.10 3.96
149 150 5.082251 ACGTCTATCATCATAGCATGCAT 57.918 39.130 21.98 8.63 33.10 3.96
150 151 4.868734 ACGTCTATCATCATAGCATGCATG 59.131 41.667 22.70 22.70 33.10 4.06
160 161 2.516695 CATGCATGCCCGTAGCCA 60.517 61.111 14.93 0.00 42.71 4.75
161 162 2.516930 ATGCATGCCCGTAGCCAC 60.517 61.111 16.68 0.00 42.71 5.01
162 163 3.342668 ATGCATGCCCGTAGCCACA 62.343 57.895 16.68 0.00 42.71 4.17
163 164 2.516930 GCATGCCCGTAGCCACAT 60.517 61.111 6.36 0.00 42.71 3.21
164 165 1.227823 GCATGCCCGTAGCCACATA 60.228 57.895 6.36 0.00 42.71 2.29
165 166 0.817634 GCATGCCCGTAGCCACATAA 60.818 55.000 6.36 0.00 42.71 1.90
166 167 1.229428 CATGCCCGTAGCCACATAAG 58.771 55.000 0.00 0.00 42.71 1.73
167 168 0.837272 ATGCCCGTAGCCACATAAGT 59.163 50.000 0.00 0.00 42.71 2.24
168 169 1.487300 TGCCCGTAGCCACATAAGTA 58.513 50.000 0.00 0.00 42.71 2.24
169 170 1.137479 TGCCCGTAGCCACATAAGTAC 59.863 52.381 0.00 0.00 42.71 2.73
170 171 1.137479 GCCCGTAGCCACATAAGTACA 59.863 52.381 0.00 0.00 34.35 2.90
171 172 2.419021 GCCCGTAGCCACATAAGTACAA 60.419 50.000 0.00 0.00 34.35 2.41
172 173 3.864243 CCCGTAGCCACATAAGTACAAA 58.136 45.455 0.00 0.00 0.00 2.83
173 174 4.448210 CCCGTAGCCACATAAGTACAAAT 58.552 43.478 0.00 0.00 0.00 2.32
174 175 5.603596 CCCGTAGCCACATAAGTACAAATA 58.396 41.667 0.00 0.00 0.00 1.40
175 176 5.464389 CCCGTAGCCACATAAGTACAAATAC 59.536 44.000 0.00 0.00 0.00 1.89
176 177 6.278363 CCGTAGCCACATAAGTACAAATACT 58.722 40.000 0.00 0.00 43.91 2.12
190 191 8.959705 AGTACAAATACTTACAAAGGATAGGC 57.040 34.615 0.00 0.00 38.59 3.93
191 192 8.545472 AGTACAAATACTTACAAAGGATAGGCA 58.455 33.333 0.00 0.00 38.59 4.75
192 193 7.625828 ACAAATACTTACAAAGGATAGGCAC 57.374 36.000 0.00 0.00 29.85 5.01
193 194 7.402862 ACAAATACTTACAAAGGATAGGCACT 58.597 34.615 0.00 0.00 46.37 4.40
194 195 7.336931 ACAAATACTTACAAAGGATAGGCACTG 59.663 37.037 0.00 0.00 41.52 3.66
195 196 6.808321 ATACTTACAAAGGATAGGCACTGA 57.192 37.500 0.00 0.00 41.52 3.41
196 197 5.499004 ACTTACAAAGGATAGGCACTGAA 57.501 39.130 0.00 0.00 41.52 3.02
197 198 6.067217 ACTTACAAAGGATAGGCACTGAAT 57.933 37.500 0.00 0.00 41.52 2.57
198 199 5.882557 ACTTACAAAGGATAGGCACTGAATG 59.117 40.000 0.00 0.00 41.52 2.67
211 212 4.443913 CACTGAATGCACCATTGAATGA 57.556 40.909 6.76 0.00 33.90 2.57
212 213 4.421058 CACTGAATGCACCATTGAATGAG 58.579 43.478 6.76 0.00 33.90 2.90
213 214 3.119245 ACTGAATGCACCATTGAATGAGC 60.119 43.478 6.76 10.73 33.90 4.26
214 215 2.159352 TGAATGCACCATTGAATGAGCG 60.159 45.455 6.76 0.00 33.90 5.03
215 216 0.101759 ATGCACCATTGAATGAGCGC 59.898 50.000 6.76 0.00 35.03 5.92
216 217 1.584483 GCACCATTGAATGAGCGCG 60.584 57.895 6.76 0.00 0.00 6.86
217 218 1.980951 GCACCATTGAATGAGCGCGA 61.981 55.000 12.10 0.00 0.00 5.87
218 219 0.247814 CACCATTGAATGAGCGCGAC 60.248 55.000 12.10 2.99 0.00 5.19
219 220 0.673333 ACCATTGAATGAGCGCGACA 60.673 50.000 12.10 9.96 0.00 4.35
220 221 0.447406 CCATTGAATGAGCGCGACAA 59.553 50.000 12.10 11.13 0.00 3.18
221 222 1.530441 CCATTGAATGAGCGCGACAAG 60.530 52.381 12.10 6.18 0.00 3.16
222 223 0.729116 ATTGAATGAGCGCGACAAGG 59.271 50.000 12.10 0.00 0.00 3.61
223 224 0.320334 TTGAATGAGCGCGACAAGGA 60.320 50.000 12.10 0.00 0.00 3.36
224 225 0.320334 TGAATGAGCGCGACAAGGAA 60.320 50.000 12.10 0.00 0.00 3.36
225 226 1.009829 GAATGAGCGCGACAAGGAAT 58.990 50.000 12.10 0.00 0.00 3.01
226 227 0.729116 AATGAGCGCGACAAGGAATG 59.271 50.000 12.10 0.00 0.00 2.67
227 228 1.091771 ATGAGCGCGACAAGGAATGG 61.092 55.000 12.10 0.00 0.00 3.16
228 229 3.100862 GAGCGCGACAAGGAATGGC 62.101 63.158 12.10 0.00 0.00 4.40
229 230 3.430862 GCGCGACAAGGAATGGCA 61.431 61.111 12.10 0.00 36.57 4.92
230 231 2.787249 CGCGACAAGGAATGGCAG 59.213 61.111 0.00 0.00 36.57 4.85
231 232 2.034879 CGCGACAAGGAATGGCAGT 61.035 57.895 0.00 0.00 36.57 4.40
232 233 1.503542 GCGACAAGGAATGGCAGTG 59.496 57.895 0.00 0.00 36.57 3.66
233 234 1.926511 GCGACAAGGAATGGCAGTGG 61.927 60.000 0.00 0.00 36.57 4.00
234 235 1.885871 GACAAGGAATGGCAGTGGC 59.114 57.895 10.30 10.30 36.87 5.01
235 236 0.610232 GACAAGGAATGGCAGTGGCT 60.610 55.000 18.53 0.00 36.87 4.75
236 237 0.896940 ACAAGGAATGGCAGTGGCTG 60.897 55.000 18.53 8.92 40.87 4.85
237 238 0.609957 CAAGGAATGGCAGTGGCTGA 60.610 55.000 18.53 0.00 40.87 4.26
238 239 0.333993 AAGGAATGGCAGTGGCTGAT 59.666 50.000 18.53 0.53 40.87 2.90
239 240 1.216064 AGGAATGGCAGTGGCTGATA 58.784 50.000 18.53 0.00 40.87 2.15
240 241 1.565759 AGGAATGGCAGTGGCTGATAA 59.434 47.619 18.53 0.00 40.87 1.75
241 242 1.678101 GGAATGGCAGTGGCTGATAAC 59.322 52.381 18.53 3.72 40.87 1.89
242 243 1.331756 GAATGGCAGTGGCTGATAACG 59.668 52.381 18.53 0.00 40.87 3.18
243 244 0.253044 ATGGCAGTGGCTGATAACGT 59.747 50.000 18.53 0.00 40.87 3.99
244 245 0.673333 TGGCAGTGGCTGATAACGTG 60.673 55.000 18.53 0.00 40.87 4.49
245 246 1.369091 GGCAGTGGCTGATAACGTGG 61.369 60.000 9.90 0.00 40.87 4.94
246 247 1.369091 GCAGTGGCTGATAACGTGGG 61.369 60.000 0.00 0.00 36.96 4.61
247 248 0.744414 CAGTGGCTGATAACGTGGGG 60.744 60.000 0.00 0.00 32.44 4.96
248 249 1.198759 AGTGGCTGATAACGTGGGGT 61.199 55.000 0.00 0.00 0.00 4.95
249 250 1.024579 GTGGCTGATAACGTGGGGTG 61.025 60.000 0.00 0.00 0.00 4.61
250 251 2.112815 GGCTGATAACGTGGGGTGC 61.113 63.158 0.00 0.00 0.00 5.01
251 252 2.461110 GCTGATAACGTGGGGTGCG 61.461 63.158 0.00 0.00 0.00 5.34
252 253 1.813753 CTGATAACGTGGGGTGCGG 60.814 63.158 0.00 0.00 0.00 5.69
253 254 2.512974 GATAACGTGGGGTGCGGG 60.513 66.667 0.00 0.00 0.00 6.13
254 255 4.104183 ATAACGTGGGGTGCGGGG 62.104 66.667 0.00 0.00 0.00 5.73
266 267 2.109181 GCGGGGTGCAGATCCTAC 59.891 66.667 0.00 0.00 45.45 3.18
267 268 2.822399 CGGGGTGCAGATCCTACC 59.178 66.667 0.00 2.79 0.00 3.18
268 269 2.822399 GGGGTGCAGATCCTACCG 59.178 66.667 0.00 0.00 35.31 4.02
269 270 2.064581 GGGGTGCAGATCCTACCGT 61.065 63.158 0.00 0.00 35.31 4.83
270 271 1.442148 GGGTGCAGATCCTACCGTC 59.558 63.158 0.00 0.00 35.31 4.79
271 272 1.327690 GGGTGCAGATCCTACCGTCA 61.328 60.000 0.00 0.00 35.31 4.35
272 273 0.535335 GGTGCAGATCCTACCGTCAA 59.465 55.000 0.00 0.00 0.00 3.18
273 274 1.471676 GGTGCAGATCCTACCGTCAAG 60.472 57.143 0.00 0.00 0.00 3.02
275 276 1.112113 GCAGATCCTACCGTCAAGGA 58.888 55.000 0.67 0.67 46.96 3.36
276 277 1.202428 GCAGATCCTACCGTCAAGGAC 60.202 57.143 0.19 0.00 45.78 3.85
277 278 2.100197 CAGATCCTACCGTCAAGGACA 58.900 52.381 0.19 0.00 45.78 4.02
278 279 2.100989 AGATCCTACCGTCAAGGACAC 58.899 52.381 0.19 0.00 45.78 3.67
279 280 2.100989 GATCCTACCGTCAAGGACACT 58.899 52.381 0.19 0.00 45.78 3.55
280 281 1.254026 TCCTACCGTCAAGGACACTG 58.746 55.000 0.00 0.00 45.00 3.66
281 282 0.246635 CCTACCGTCAAGGACACTGG 59.753 60.000 0.00 0.00 45.00 4.00
282 283 0.966920 CTACCGTCAAGGACACTGGT 59.033 55.000 0.00 0.00 45.00 4.00
283 284 0.677288 TACCGTCAAGGACACTGGTG 59.323 55.000 0.00 0.00 45.00 4.17
284 285 1.301716 CCGTCAAGGACACTGGTGG 60.302 63.158 5.70 0.00 45.00 4.61
285 286 1.445942 CGTCAAGGACACTGGTGGT 59.554 57.895 5.70 0.00 32.09 4.16
286 287 0.677288 CGTCAAGGACACTGGTGGTA 59.323 55.000 5.70 0.00 32.09 3.25
287 288 1.336887 CGTCAAGGACACTGGTGGTAG 60.337 57.143 5.70 0.00 32.09 3.18
288 289 1.002087 GTCAAGGACACTGGTGGTAGG 59.998 57.143 5.70 0.00 32.09 3.18
289 290 0.324943 CAAGGACACTGGTGGTAGGG 59.675 60.000 5.70 0.00 34.19 3.53
290 291 0.104620 AAGGACACTGGTGGTAGGGT 60.105 55.000 5.70 0.00 36.92 4.34
291 292 0.788383 AGGACACTGGTGGTAGGGTA 59.212 55.000 5.70 0.00 33.62 3.69
292 293 1.365028 AGGACACTGGTGGTAGGGTAT 59.635 52.381 5.70 0.00 33.62 2.73
293 294 2.588720 AGGACACTGGTGGTAGGGTATA 59.411 50.000 5.70 0.00 33.62 1.47
294 295 3.013188 AGGACACTGGTGGTAGGGTATAA 59.987 47.826 5.70 0.00 33.62 0.98
295 296 3.971971 GGACACTGGTGGTAGGGTATAAT 59.028 47.826 5.70 0.00 33.62 1.28
296 297 5.102956 AGGACACTGGTGGTAGGGTATAATA 60.103 44.000 5.70 0.00 33.62 0.98
297 298 5.245526 GGACACTGGTGGTAGGGTATAATAG 59.754 48.000 5.70 0.00 33.62 1.73
298 299 4.591924 ACACTGGTGGTAGGGTATAATAGC 59.408 45.833 5.70 0.00 31.12 2.97
299 300 4.020485 CACTGGTGGTAGGGTATAATAGCC 60.020 50.000 0.00 0.00 46.53 3.93
300 301 8.593830 ACACTGGTGGTAGGGTATAATAGCCT 62.594 46.154 0.00 0.00 45.96 4.58
301 302 9.303776 ACACTGGTGGTAGGGTATAATAGCCTA 62.304 44.444 0.00 0.00 46.20 3.93
308 309 4.323553 GGGTATAATAGCCTATCGCCAG 57.676 50.000 0.00 0.00 42.93 4.85
309 310 3.958798 GGGTATAATAGCCTATCGCCAGA 59.041 47.826 0.00 0.00 42.93 3.86
310 311 4.404715 GGGTATAATAGCCTATCGCCAGAA 59.595 45.833 0.00 0.00 42.93 3.02
311 312 5.105064 GGGTATAATAGCCTATCGCCAGAAA 60.105 44.000 0.00 0.00 42.93 2.52
312 313 5.811100 GGTATAATAGCCTATCGCCAGAAAC 59.189 44.000 0.00 0.00 38.78 2.78
313 314 5.746990 ATAATAGCCTATCGCCAGAAACT 57.253 39.130 0.00 0.00 38.78 2.66
314 315 4.423625 AATAGCCTATCGCCAGAAACTT 57.576 40.909 0.00 0.00 38.78 2.66
315 316 2.789409 AGCCTATCGCCAGAAACTTT 57.211 45.000 0.00 0.00 38.78 2.66
316 317 2.359900 AGCCTATCGCCAGAAACTTTG 58.640 47.619 0.00 0.00 38.78 2.77
317 318 2.027192 AGCCTATCGCCAGAAACTTTGA 60.027 45.455 0.00 0.00 38.78 2.69
318 319 2.096013 GCCTATCGCCAGAAACTTTGAC 59.904 50.000 0.00 0.00 0.00 3.18
319 320 2.348666 CCTATCGCCAGAAACTTTGACG 59.651 50.000 0.00 0.00 0.00 4.35
320 321 1.156736 ATCGCCAGAAACTTTGACGG 58.843 50.000 0.00 0.00 0.00 4.79
321 322 0.179067 TCGCCAGAAACTTTGACGGT 60.179 50.000 0.00 0.00 0.00 4.83
322 323 1.068895 TCGCCAGAAACTTTGACGGTA 59.931 47.619 0.00 0.00 0.00 4.02
323 324 1.459592 CGCCAGAAACTTTGACGGTAG 59.540 52.381 0.00 0.00 0.00 3.18
324 325 1.804748 GCCAGAAACTTTGACGGTAGG 59.195 52.381 0.00 0.00 0.00 3.18
325 326 2.423577 CCAGAAACTTTGACGGTAGGG 58.576 52.381 0.00 0.00 0.00 3.53
326 327 2.224450 CCAGAAACTTTGACGGTAGGGT 60.224 50.000 0.00 0.00 0.00 4.34
327 328 3.007182 CCAGAAACTTTGACGGTAGGGTA 59.993 47.826 0.00 0.00 0.00 3.69
328 329 4.323257 CCAGAAACTTTGACGGTAGGGTAT 60.323 45.833 0.00 0.00 0.00 2.73
329 330 5.243207 CAGAAACTTTGACGGTAGGGTATT 58.757 41.667 0.00 0.00 0.00 1.89
330 331 5.704053 CAGAAACTTTGACGGTAGGGTATTT 59.296 40.000 0.00 0.00 0.00 1.40
331 332 6.206048 CAGAAACTTTGACGGTAGGGTATTTT 59.794 38.462 0.00 0.00 0.00 1.82
332 333 6.774170 AGAAACTTTGACGGTAGGGTATTTTT 59.226 34.615 0.00 0.00 0.00 1.94
333 334 6.564709 AACTTTGACGGTAGGGTATTTTTC 57.435 37.500 0.00 0.00 0.00 2.29
334 335 5.623169 ACTTTGACGGTAGGGTATTTTTCA 58.377 37.500 0.00 0.00 0.00 2.69
335 336 5.471116 ACTTTGACGGTAGGGTATTTTTCAC 59.529 40.000 0.00 0.00 0.00 3.18
336 337 3.587923 TGACGGTAGGGTATTTTTCACG 58.412 45.455 0.00 0.00 0.00 4.35
337 338 3.006752 TGACGGTAGGGTATTTTTCACGT 59.993 43.478 0.00 0.00 34.50 4.49
338 339 3.996363 GACGGTAGGGTATTTTTCACGTT 59.004 43.478 0.00 0.00 31.72 3.99
339 340 5.146010 ACGGTAGGGTATTTTTCACGTTA 57.854 39.130 0.00 0.00 0.00 3.18
340 341 4.929211 ACGGTAGGGTATTTTTCACGTTAC 59.071 41.667 0.00 0.00 0.00 2.50
341 342 4.031652 CGGTAGGGTATTTTTCACGTTACG 59.968 45.833 2.19 2.19 0.00 3.18
342 343 5.167845 GGTAGGGTATTTTTCACGTTACGA 58.832 41.667 13.03 0.00 0.00 3.43
343 344 5.062183 GGTAGGGTATTTTTCACGTTACGAC 59.938 44.000 13.03 0.00 0.00 4.34
359 360 2.253392 CGACGGCGTAGTTAAACTCT 57.747 50.000 14.74 0.00 0.00 3.24
360 361 3.389687 CGACGGCGTAGTTAAACTCTA 57.610 47.619 14.74 0.00 0.00 2.43
361 362 3.094294 CGACGGCGTAGTTAAACTCTAC 58.906 50.000 14.74 0.00 35.71 2.59
362 363 3.430008 GACGGCGTAGTTAAACTCTACC 58.570 50.000 14.74 0.00 35.66 3.18
363 364 2.159517 ACGGCGTAGTTAAACTCTACCG 60.160 50.000 12.58 9.68 35.66 4.02
364 365 2.159517 CGGCGTAGTTAAACTCTACCGT 60.160 50.000 0.00 0.00 35.66 4.83
365 366 3.430008 GGCGTAGTTAAACTCTACCGTC 58.570 50.000 0.00 0.00 35.66 4.79
366 367 3.119849 GGCGTAGTTAAACTCTACCGTCA 60.120 47.826 0.00 0.00 35.66 4.35
367 368 3.848582 GCGTAGTTAAACTCTACCGTCAC 59.151 47.826 0.00 0.00 35.66 3.67
368 369 4.613622 GCGTAGTTAAACTCTACCGTCACA 60.614 45.833 0.00 0.00 35.66 3.58
369 370 5.451908 CGTAGTTAAACTCTACCGTCACAA 58.548 41.667 0.00 0.00 35.66 3.33
370 371 5.914635 CGTAGTTAAACTCTACCGTCACAAA 59.085 40.000 0.00 0.00 35.66 2.83
371 372 6.129352 CGTAGTTAAACTCTACCGTCACAAAC 60.129 42.308 0.00 0.00 35.66 2.93
372 373 5.052481 AGTTAAACTCTACCGTCACAAACC 58.948 41.667 0.00 0.00 0.00 3.27
373 374 2.144482 AACTCTACCGTCACAAACCG 57.856 50.000 0.00 0.00 0.00 4.44
374 375 1.035139 ACTCTACCGTCACAAACCGT 58.965 50.000 0.00 0.00 0.00 4.83
376 377 0.032403 TCTACCGTCACAAACCGTGG 59.968 55.000 0.00 0.00 46.36 4.94
402 403 0.516877 CATGTTATACCATGCCGCCG 59.483 55.000 0.00 0.00 36.15 6.46
403 404 0.394938 ATGTTATACCATGCCGCCGA 59.605 50.000 0.00 0.00 0.00 5.54
404 405 0.249699 TGTTATACCATGCCGCCGAG 60.250 55.000 0.00 0.00 0.00 4.63
405 406 0.032952 GTTATACCATGCCGCCGAGA 59.967 55.000 0.00 0.00 0.00 4.04
406 407 0.753867 TTATACCATGCCGCCGAGAA 59.246 50.000 0.00 0.00 0.00 2.87
407 408 0.032952 TATACCATGCCGCCGAGAAC 59.967 55.000 0.00 0.00 0.00 3.01
408 409 1.686325 ATACCATGCCGCCGAGAACT 61.686 55.000 0.00 0.00 0.00 3.01
409 410 1.038681 TACCATGCCGCCGAGAACTA 61.039 55.000 0.00 0.00 0.00 2.24
410 411 1.069765 CCATGCCGCCGAGAACTAT 59.930 57.895 0.00 0.00 0.00 2.12
411 412 1.224069 CCATGCCGCCGAGAACTATG 61.224 60.000 0.00 0.00 0.00 2.23
412 413 0.249447 CATGCCGCCGAGAACTATGA 60.249 55.000 0.00 0.00 0.00 2.15
413 414 0.249489 ATGCCGCCGAGAACTATGAC 60.249 55.000 0.00 0.00 0.00 3.06
414 415 1.944676 GCCGCCGAGAACTATGACG 60.945 63.158 0.00 0.00 0.00 4.35
415 416 1.299165 CCGCCGAGAACTATGACGG 60.299 63.158 0.00 0.00 46.74 4.79
416 417 1.432251 CGCCGAGAACTATGACGGT 59.568 57.895 0.00 0.00 45.91 4.83
417 418 0.659427 CGCCGAGAACTATGACGGTA 59.341 55.000 0.00 0.00 45.91 4.02
418 419 1.333881 CGCCGAGAACTATGACGGTAG 60.334 57.143 0.00 0.00 45.91 3.18
419 420 1.945394 GCCGAGAACTATGACGGTAGA 59.055 52.381 0.00 0.00 45.91 2.59
420 421 2.357009 GCCGAGAACTATGACGGTAGAA 59.643 50.000 0.00 0.00 45.91 2.10
421 422 3.181493 GCCGAGAACTATGACGGTAGAAA 60.181 47.826 0.00 0.00 45.91 2.52
422 423 4.676196 GCCGAGAACTATGACGGTAGAAAA 60.676 45.833 0.00 0.00 45.91 2.29
423 424 5.404946 CCGAGAACTATGACGGTAGAAAAA 58.595 41.667 0.00 0.00 40.42 1.94
465 466 7.458409 AAAATCAATATGGGATCAGATTCGG 57.542 36.000 0.00 0.00 33.06 4.30
466 467 3.942829 TCAATATGGGATCAGATTCGGC 58.057 45.455 0.00 0.00 33.06 5.54
467 468 3.584406 TCAATATGGGATCAGATTCGGCT 59.416 43.478 0.00 0.00 33.06 5.52
468 469 4.777366 TCAATATGGGATCAGATTCGGCTA 59.223 41.667 0.00 0.00 33.06 3.93
469 470 5.248248 TCAATATGGGATCAGATTCGGCTAA 59.752 40.000 0.00 0.00 33.06 3.09
470 471 5.762179 ATATGGGATCAGATTCGGCTAAA 57.238 39.130 0.00 0.00 0.00 1.85
471 472 3.194005 TGGGATCAGATTCGGCTAAAC 57.806 47.619 0.00 0.00 0.00 2.01
472 473 2.771943 TGGGATCAGATTCGGCTAAACT 59.228 45.455 0.00 0.00 0.00 2.66
473 474 3.199946 TGGGATCAGATTCGGCTAAACTT 59.800 43.478 0.00 0.00 0.00 2.66
474 475 4.200092 GGGATCAGATTCGGCTAAACTTT 58.800 43.478 0.00 0.00 0.00 2.66
475 476 4.273724 GGGATCAGATTCGGCTAAACTTTC 59.726 45.833 0.00 0.00 0.00 2.62
476 477 4.876107 GGATCAGATTCGGCTAAACTTTCA 59.124 41.667 0.00 0.00 0.00 2.69
477 478 5.354234 GGATCAGATTCGGCTAAACTTTCAA 59.646 40.000 0.00 0.00 0.00 2.69
478 479 6.128007 GGATCAGATTCGGCTAAACTTTCAAA 60.128 38.462 0.00 0.00 0.00 2.69
479 480 6.627395 TCAGATTCGGCTAAACTTTCAAAA 57.373 33.333 0.00 0.00 0.00 2.44
480 481 7.033530 TCAGATTCGGCTAAACTTTCAAAAA 57.966 32.000 0.00 0.00 0.00 1.94
521 522 4.436998 GGCACCAGGTCGACCGAG 62.437 72.222 28.26 24.31 42.08 4.63
580 588 1.406069 CGGACAGGAAGGTGGAATCTG 60.406 57.143 0.00 0.00 0.00 2.90
635 655 8.598916 TCCTTTTCTATCGGTATAATAATGCCA 58.401 33.333 0.00 0.00 37.72 4.92
671 691 0.608640 CGGTAGGAGGCCCATATGAC 59.391 60.000 3.65 0.00 33.88 3.06
674 694 2.330216 GTAGGAGGCCCATATGACAGT 58.670 52.381 3.65 0.00 33.88 3.55
684 704 5.455326 GGCCCATATGACAGTGAATCTTACT 60.455 44.000 3.65 0.00 0.00 2.24
707 727 3.084039 CAGCTCTTAGGTTTGCATTCCA 58.916 45.455 9.76 0.00 0.00 3.53
708 728 3.698040 CAGCTCTTAGGTTTGCATTCCAT 59.302 43.478 9.76 0.00 0.00 3.41
709 729 4.159135 CAGCTCTTAGGTTTGCATTCCATT 59.841 41.667 9.76 0.00 0.00 3.16
710 730 4.400567 AGCTCTTAGGTTTGCATTCCATTC 59.599 41.667 9.76 0.00 0.00 2.67
711 731 4.400567 GCTCTTAGGTTTGCATTCCATTCT 59.599 41.667 9.76 0.00 0.00 2.40
716 736 5.294734 AGGTTTGCATTCCATTCTGTTTT 57.705 34.783 9.76 0.00 0.00 2.43
744 765 4.494091 TCTCATCCCTGTTCTTCATTCC 57.506 45.455 0.00 0.00 0.00 3.01
792 814 2.172717 CCGAGGAAATAGTGACCCCATT 59.827 50.000 0.00 0.00 0.00 3.16
793 815 3.206150 CGAGGAAATAGTGACCCCATTG 58.794 50.000 0.00 0.00 0.00 2.82
864 890 3.658048 GGAAACGTAAGCGGCCAA 58.342 55.556 2.24 0.00 43.45 4.52
871 897 3.315949 TAAGCGGCCAACGGAGGT 61.316 61.111 2.24 0.00 44.51 3.85
917 943 1.574702 CGCGTTTTCCTCCCACCTTC 61.575 60.000 0.00 0.00 0.00 3.46
918 944 1.241990 GCGTTTTCCTCCCACCTTCC 61.242 60.000 0.00 0.00 0.00 3.46
919 945 0.400594 CGTTTTCCTCCCACCTTCCT 59.599 55.000 0.00 0.00 0.00 3.36
920 946 1.610886 CGTTTTCCTCCCACCTTCCTC 60.611 57.143 0.00 0.00 0.00 3.71
921 947 1.705745 GTTTTCCTCCCACCTTCCTCT 59.294 52.381 0.00 0.00 0.00 3.69
922 948 1.657804 TTTCCTCCCACCTTCCTCTC 58.342 55.000 0.00 0.00 0.00 3.20
923 949 0.252742 TTCCTCCCACCTTCCTCTCC 60.253 60.000 0.00 0.00 0.00 3.71
924 950 1.156322 TCCTCCCACCTTCCTCTCCT 61.156 60.000 0.00 0.00 0.00 3.69
925 951 0.689412 CCTCCCACCTTCCTCTCCTC 60.689 65.000 0.00 0.00 0.00 3.71
926 952 0.689412 CTCCCACCTTCCTCTCCTCC 60.689 65.000 0.00 0.00 0.00 4.30
927 953 1.156322 TCCCACCTTCCTCTCCTCCT 61.156 60.000 0.00 0.00 0.00 3.69
928 954 0.689412 CCCACCTTCCTCTCCTCCTC 60.689 65.000 0.00 0.00 0.00 3.71
929 955 0.689412 CCACCTTCCTCTCCTCCTCC 60.689 65.000 0.00 0.00 0.00 4.30
990 1028 1.667191 GCGCTGCATCCATCGATCT 60.667 57.895 0.00 0.00 32.67 2.75
1138 1182 2.266554 GGATTCTCACGCTTGTCTCTG 58.733 52.381 0.00 0.00 0.00 3.35
1139 1183 2.353208 GGATTCTCACGCTTGTCTCTGT 60.353 50.000 0.00 0.00 0.00 3.41
1140 1184 2.890808 TTCTCACGCTTGTCTCTGTT 57.109 45.000 0.00 0.00 0.00 3.16
1145 1189 2.351418 TCACGCTTGTCTCTGTTTTGTG 59.649 45.455 0.00 0.00 0.00 3.33
1267 1311 4.473520 CCCGCCGCATGACCTCTT 62.474 66.667 0.00 0.00 0.00 2.85
1279 1323 3.154827 TGACCTCTTCCCAAATCCAAC 57.845 47.619 0.00 0.00 0.00 3.77
1357 1409 3.715628 AACCTGATGTTGTTGTTGCTC 57.284 42.857 0.00 0.00 35.31 4.26
1795 1935 3.223674 ACACGGAAAAAGGTGAGGAAT 57.776 42.857 0.00 0.00 37.58 3.01
1854 1995 6.603599 ACCCATTCTTTAAGATTAACCAGAGC 59.396 38.462 0.00 0.00 0.00 4.09
1875 2016 5.720202 AGCAAACTACGTGATGATTAGTCA 58.280 37.500 0.00 0.00 39.04 3.41
1881 2022 8.547967 AACTACGTGATGATTAGTCAAAACAT 57.452 30.769 0.00 0.00 38.01 2.71
1894 2035 8.974060 TTAGTCAAAACATAACTGAGGAGTTT 57.026 30.769 0.00 0.00 39.56 2.66
1897 2038 7.775561 AGTCAAAACATAACTGAGGAGTTTTCT 59.224 33.333 0.00 0.00 39.56 2.52
1921 2062 9.924650 TCTTGGAGTTTATGTTACTTTAGAGAC 57.075 33.333 0.00 0.00 0.00 3.36
1922 2063 9.152595 CTTGGAGTTTATGTTACTTTAGAGACC 57.847 37.037 0.00 0.00 0.00 3.85
1923 2064 8.431910 TGGAGTTTATGTTACTTTAGAGACCT 57.568 34.615 0.00 0.00 0.00 3.85
1924 2065 8.877195 TGGAGTTTATGTTACTTTAGAGACCTT 58.123 33.333 0.00 0.00 0.00 3.50
1925 2066 9.722184 GGAGTTTATGTTACTTTAGAGACCTTT 57.278 33.333 0.00 0.00 0.00 3.11
1930 2071 9.643693 TTATGTTACTTTAGAGACCTTTTACGG 57.356 33.333 0.00 0.00 0.00 4.02
1931 2072 7.054491 TGTTACTTTAGAGACCTTTTACGGT 57.946 36.000 0.00 0.00 40.80 4.83
1932 2073 8.177119 TGTTACTTTAGAGACCTTTTACGGTA 57.823 34.615 0.00 0.00 37.42 4.02
1933 2074 8.082242 TGTTACTTTAGAGACCTTTTACGGTAC 58.918 37.037 0.00 0.00 37.42 3.34
1934 2075 6.655078 ACTTTAGAGACCTTTTACGGTACA 57.345 37.500 0.00 0.00 37.42 2.90
1935 2076 7.237209 ACTTTAGAGACCTTTTACGGTACAT 57.763 36.000 0.00 0.00 37.42 2.29
1936 2077 7.318893 ACTTTAGAGACCTTTTACGGTACATC 58.681 38.462 0.00 0.00 37.42 3.06
1937 2078 7.178097 ACTTTAGAGACCTTTTACGGTACATCT 59.822 37.037 0.00 0.00 37.42 2.90
1938 2079 8.579850 TTTAGAGACCTTTTACGGTACATCTA 57.420 34.615 0.00 0.00 37.42 1.98
1939 2080 8.579850 TTAGAGACCTTTTACGGTACATCTAA 57.420 34.615 0.00 0.00 37.42 2.10
1940 2081 7.098074 AGAGACCTTTTACGGTACATCTAAG 57.902 40.000 0.00 0.00 37.42 2.18
1941 2082 6.888632 AGAGACCTTTTACGGTACATCTAAGA 59.111 38.462 0.00 0.00 37.42 2.10
1942 2083 7.560626 AGAGACCTTTTACGGTACATCTAAGAT 59.439 37.037 0.00 0.00 37.42 2.40
1943 2084 8.757982 AGACCTTTTACGGTACATCTAAGATA 57.242 34.615 0.00 0.00 37.42 1.98
1944 2085 9.364653 AGACCTTTTACGGTACATCTAAGATAT 57.635 33.333 0.00 0.00 37.42 1.63
1950 2091 6.466885 ACGGTACATCTAAGATATATGGGC 57.533 41.667 0.00 0.00 0.00 5.36
1951 2092 5.363005 ACGGTACATCTAAGATATATGGGCC 59.637 44.000 0.00 0.00 0.00 5.80
1952 2093 5.362717 CGGTACATCTAAGATATATGGGCCA 59.637 44.000 9.61 9.61 0.00 5.36
1953 2094 6.042093 CGGTACATCTAAGATATATGGGCCAT 59.958 42.308 24.69 24.69 0.00 4.40
1954 2095 7.445945 GGTACATCTAAGATATATGGGCCATC 58.554 42.308 25.07 9.86 0.00 3.51
1955 2096 6.506538 ACATCTAAGATATATGGGCCATCC 57.493 41.667 25.07 10.92 0.00 3.51
1966 2107 3.464720 TGGGCCATCCATTTTAGTGAA 57.535 42.857 0.00 0.00 41.46 3.18
1967 2108 3.096092 TGGGCCATCCATTTTAGTGAAC 58.904 45.455 0.00 0.00 41.46 3.18
1968 2109 2.430694 GGGCCATCCATTTTAGTGAACC 59.569 50.000 4.39 0.00 35.00 3.62
1969 2110 3.096092 GGCCATCCATTTTAGTGAACCA 58.904 45.455 0.00 0.00 0.00 3.67
1970 2111 3.513515 GGCCATCCATTTTAGTGAACCAA 59.486 43.478 0.00 0.00 0.00 3.67
1971 2112 4.494484 GCCATCCATTTTAGTGAACCAAC 58.506 43.478 0.00 0.00 0.00 3.77
1972 2113 4.732784 CCATCCATTTTAGTGAACCAACG 58.267 43.478 0.00 0.00 0.00 4.10
1973 2114 3.907894 TCCATTTTAGTGAACCAACGC 57.092 42.857 0.00 0.00 0.00 4.84
1974 2115 3.215151 TCCATTTTAGTGAACCAACGCA 58.785 40.909 0.00 0.00 0.00 5.24
1975 2116 3.823873 TCCATTTTAGTGAACCAACGCAT 59.176 39.130 0.00 0.00 0.00 4.73
1976 2117 4.083003 TCCATTTTAGTGAACCAACGCATC 60.083 41.667 0.00 0.00 0.00 3.91
1977 2118 3.529634 TTTTAGTGAACCAACGCATCG 57.470 42.857 0.00 0.00 0.00 3.84
1978 2119 1.434555 TTAGTGAACCAACGCATCGG 58.565 50.000 0.00 0.00 0.00 4.18
1979 2120 0.604073 TAGTGAACCAACGCATCGGA 59.396 50.000 0.00 0.00 0.00 4.55
1980 2121 0.036388 AGTGAACCAACGCATCGGAT 60.036 50.000 0.00 0.00 0.00 4.18
1981 2122 0.802494 GTGAACCAACGCATCGGATT 59.198 50.000 0.00 0.00 0.00 3.01
1982 2123 0.801872 TGAACCAACGCATCGGATTG 59.198 50.000 0.00 0.00 0.00 2.67
1983 2124 1.083489 GAACCAACGCATCGGATTGA 58.917 50.000 0.00 0.00 0.00 2.57
1984 2125 0.802494 AACCAACGCATCGGATTGAC 59.198 50.000 0.00 0.00 0.00 3.18
1985 2126 1.024579 ACCAACGCATCGGATTGACC 61.025 55.000 0.00 0.00 0.00 4.02
2026 2167 8.198109 AGCATGTCTCGAGTTTATGTTACTATT 58.802 33.333 13.13 0.00 0.00 1.73
2027 2168 9.459640 GCATGTCTCGAGTTTATGTTACTATTA 57.540 33.333 13.13 0.00 0.00 0.98
2053 2205 6.015856 TCTGACTATTATCTGACAGCTTAGGC 60.016 42.308 0.00 0.00 39.06 3.93
2054 2206 5.598417 TGACTATTATCTGACAGCTTAGGCA 59.402 40.000 0.00 1.91 41.70 4.75
2055 2207 5.848406 ACTATTATCTGACAGCTTAGGCAC 58.152 41.667 0.00 0.00 41.70 5.01
2144 2296 0.251354 TTGAGCTGATCCTGAGCACC 59.749 55.000 6.33 0.00 39.05 5.01
2273 2425 6.705381 CCCAACTGTTAATTTCTCATTGCAAA 59.295 34.615 1.71 0.00 0.00 3.68
2287 2439 9.859427 TTCTCATTGCAAAATAAATAACCTGAG 57.141 29.630 1.71 7.56 0.00 3.35
2289 2441 8.359875 TCATTGCAAAATAAATAACCTGAGGA 57.640 30.769 4.99 0.00 0.00 3.71
2290 2442 8.469200 TCATTGCAAAATAAATAACCTGAGGAG 58.531 33.333 4.99 0.00 0.00 3.69
2291 2443 6.773976 TGCAAAATAAATAACCTGAGGAGG 57.226 37.500 4.99 0.00 46.21 4.30
2292 2444 5.127031 TGCAAAATAAATAACCTGAGGAGGC 59.873 40.000 4.99 0.00 44.33 4.70
2294 2446 4.455070 AATAAATAACCTGAGGAGGCCC 57.545 45.455 4.99 0.00 44.33 5.80
2295 2447 1.681229 AAATAACCTGAGGAGGCCCA 58.319 50.000 4.99 0.00 44.33 5.36
2296 2448 1.216990 AATAACCTGAGGAGGCCCAG 58.783 55.000 4.99 0.00 44.33 4.45
2297 2449 0.343372 ATAACCTGAGGAGGCCCAGA 59.657 55.000 4.99 0.00 44.33 3.86
2298 2450 0.118346 TAACCTGAGGAGGCCCAGAA 59.882 55.000 4.99 0.00 44.33 3.02
2299 2451 0.772124 AACCTGAGGAGGCCCAGAAA 60.772 55.000 4.99 0.00 44.33 2.52
2300 2452 1.301293 CCTGAGGAGGCCCAGAAAC 59.699 63.158 8.19 0.00 30.52 2.78
2301 2453 1.492133 CCTGAGGAGGCCCAGAAACA 61.492 60.000 8.19 0.00 30.52 2.83
2302 2454 0.035630 CTGAGGAGGCCCAGAAACAG 60.036 60.000 0.00 0.00 32.37 3.16
2303 2455 1.377856 GAGGAGGCCCAGAAACAGC 60.378 63.158 0.00 0.00 33.88 4.40
2304 2456 2.129555 GAGGAGGCCCAGAAACAGCA 62.130 60.000 0.00 0.00 33.88 4.41
2305 2457 1.228552 GGAGGCCCAGAAACAGCAA 60.229 57.895 0.00 0.00 0.00 3.91
2306 2458 0.827507 GGAGGCCCAGAAACAGCAAA 60.828 55.000 0.00 0.00 0.00 3.68
2307 2459 1.039856 GAGGCCCAGAAACAGCAAAA 58.960 50.000 0.00 0.00 0.00 2.44
2308 2460 1.412343 GAGGCCCAGAAACAGCAAAAA 59.588 47.619 0.00 0.00 0.00 1.94
2309 2461 2.037641 GAGGCCCAGAAACAGCAAAAAT 59.962 45.455 0.00 0.00 0.00 1.82
2310 2462 2.439135 AGGCCCAGAAACAGCAAAAATT 59.561 40.909 0.00 0.00 0.00 1.82
2311 2463 3.117926 AGGCCCAGAAACAGCAAAAATTT 60.118 39.130 0.00 0.00 0.00 1.82
2312 2464 4.102367 AGGCCCAGAAACAGCAAAAATTTA 59.898 37.500 0.00 0.00 0.00 1.40
2313 2465 5.003160 GGCCCAGAAACAGCAAAAATTTAT 58.997 37.500 0.00 0.00 0.00 1.40
2314 2466 5.122239 GGCCCAGAAACAGCAAAAATTTATC 59.878 40.000 0.00 0.00 0.00 1.75
2315 2467 5.122239 GCCCAGAAACAGCAAAAATTTATCC 59.878 40.000 0.00 0.00 0.00 2.59
2316 2468 5.348451 CCCAGAAACAGCAAAAATTTATCCG 59.652 40.000 0.00 0.00 0.00 4.18
2317 2469 5.163963 CCAGAAACAGCAAAAATTTATCCGC 60.164 40.000 0.00 0.00 0.00 5.54
2318 2470 4.621034 AGAAACAGCAAAAATTTATCCGCG 59.379 37.500 0.00 0.00 0.00 6.46
2319 2471 3.840890 ACAGCAAAAATTTATCCGCGA 57.159 38.095 8.23 0.00 0.00 5.87
2320 2472 4.167554 ACAGCAAAAATTTATCCGCGAA 57.832 36.364 8.23 0.00 0.00 4.70
2321 2473 4.165779 ACAGCAAAAATTTATCCGCGAAG 58.834 39.130 8.23 0.00 0.00 3.79
2322 2474 4.165779 CAGCAAAAATTTATCCGCGAAGT 58.834 39.130 8.23 0.00 0.00 3.01
2323 2475 4.262976 CAGCAAAAATTTATCCGCGAAGTC 59.737 41.667 8.23 0.00 0.00 3.01
4065 4234 3.920231 TGCTCAGACCATAAAGCTCAT 57.080 42.857 0.00 0.00 35.76 2.90
4304 4473 7.217200 TGACTGTTCTTGTCTGTTAAGCTTAT 58.783 34.615 7.08 0.00 35.63 1.73
4338 4516 2.877043 AGCAGCAAAGAAACACCAAG 57.123 45.000 0.00 0.00 0.00 3.61
4368 4546 6.141844 CGATACTTACACACATGGACGATAAC 59.858 42.308 0.00 0.00 0.00 1.89
4386 4564 5.277011 CGATAACGTTGATGCAATCTCACAT 60.277 40.000 11.99 0.00 38.32 3.21
4496 4678 1.375523 CGTGAAGGGTACTGTGGCC 60.376 63.158 0.00 0.00 0.00 5.36
4538 4720 4.190001 CCAATGGAGATGTGAGTTCTGAG 58.810 47.826 0.00 0.00 0.00 3.35
4540 4722 5.105187 CCAATGGAGATGTGAGTTCTGAGTA 60.105 44.000 0.00 0.00 0.00 2.59
4541 4723 6.407865 CCAATGGAGATGTGAGTTCTGAGTAT 60.408 42.308 0.00 0.00 0.00 2.12
4542 4724 7.201947 CCAATGGAGATGTGAGTTCTGAGTATA 60.202 40.741 0.00 0.00 0.00 1.47
4547 4737 7.934665 GGAGATGTGAGTTCTGAGTATACTCTA 59.065 40.741 28.53 16.72 43.25 2.43
4550 4740 8.809468 ATGTGAGTTCTGAGTATACTCTACAA 57.191 34.615 28.53 17.27 43.25 2.41
4651 4941 3.450457 AGCTGAAGGATGGAAGAGTACTG 59.550 47.826 0.00 0.00 0.00 2.74
4657 4947 2.546795 GGATGGAAGAGTACTGGATGCG 60.547 54.545 0.00 0.00 0.00 4.73
4663 4953 2.111384 AGAGTACTGGATGCGGACATT 58.889 47.619 0.00 0.00 36.35 2.71
4672 4962 1.258982 GATGCGGACATTGTCATCGTC 59.741 52.381 18.09 14.21 36.35 4.20
4889 5179 7.391148 TGCCTTAAGGTTTGACATTATCTTC 57.609 36.000 22.55 0.89 37.57 2.87
5063 5353 2.680339 GCAGTAAAGGTGAGCAATCCTC 59.320 50.000 0.00 0.00 41.15 3.71
5091 5381 1.459450 CCATTCACAAACCCGGTAGG 58.541 55.000 0.00 0.00 43.78 3.18
5122 5414 6.155827 TCAACTGTTTGTTTTCCAGTGAAAG 58.844 36.000 0.00 0.00 41.31 2.62
5378 5688 0.113776 TCGGTGTGTTCCTAGAGGGT 59.886 55.000 0.00 0.00 36.25 4.34
5500 5810 5.339035 CCACCAAGATCTGAAGATTCCTCTT 60.339 44.000 0.00 0.00 44.53 2.85
5501 5811 6.126940 CCACCAAGATCTGAAGATTCCTCTTA 60.127 42.308 0.00 0.00 41.87 2.10
5502 5812 7.419981 CCACCAAGATCTGAAGATTCCTCTTAT 60.420 40.741 0.00 0.00 41.87 1.73
5503 5813 7.656948 CACCAAGATCTGAAGATTCCTCTTATC 59.343 40.741 0.00 0.00 41.87 1.75
5504 5814 7.568366 ACCAAGATCTGAAGATTCCTCTTATCT 59.432 37.037 0.00 0.00 41.87 1.98
5505 5815 9.087871 CCAAGATCTGAAGATTCCTCTTATCTA 57.912 37.037 0.00 0.00 41.87 1.98
5564 5905 2.959707 CCGATGCTTCCTAGTTCCTAGT 59.040 50.000 0.00 0.00 32.62 2.57
5629 5972 3.201290 CTGTGACCACTATGGCAGAATC 58.799 50.000 0.00 0.00 42.67 2.52
5678 6025 9.590451 TGGTTCTACATTCTTTTAGGTTATACG 57.410 33.333 0.00 0.00 0.00 3.06
5731 6556 3.347958 TTCATGCCAAACGAACAAGAC 57.652 42.857 0.00 0.00 0.00 3.01
5823 6649 7.026631 TGAAAATTAATTCTACCATGAGCCG 57.973 36.000 0.10 0.00 0.00 5.52
5824 6650 6.826231 TGAAAATTAATTCTACCATGAGCCGA 59.174 34.615 0.10 0.00 0.00 5.54
5825 6651 7.502226 TGAAAATTAATTCTACCATGAGCCGAT 59.498 33.333 0.10 0.00 0.00 4.18
5826 6652 7.440523 AAATTAATTCTACCATGAGCCGATC 57.559 36.000 0.10 0.00 0.00 3.69
5829 6655 1.179174 TCTACCATGAGCCGATCCCG 61.179 60.000 0.00 0.00 0.00 5.14
5868 6696 7.664758 ACTTTATCAAGCAGAAAAGAAGCAAT 58.335 30.769 14.47 0.00 32.99 3.56
5910 6738 3.205536 GCAAGCGCTCTAAGGCCC 61.206 66.667 12.06 0.00 34.30 5.80
5911 6739 2.268920 CAAGCGCTCTAAGGCCCA 59.731 61.111 12.06 0.00 0.00 5.36
6074 6935 0.622136 CAACCCCACCCCCTAAGTAC 59.378 60.000 0.00 0.00 0.00 2.73
6075 6936 0.550884 AACCCCACCCCCTAAGTACC 60.551 60.000 0.00 0.00 0.00 3.34
6076 6937 1.399057 CCCCACCCCCTAAGTACCT 59.601 63.158 0.00 0.00 0.00 3.08
6077 6938 0.253488 CCCCACCCCCTAAGTACCTT 60.253 60.000 0.00 0.00 0.00 3.50
6078 6939 0.916809 CCCACCCCCTAAGTACCTTG 59.083 60.000 0.00 0.00 0.00 3.61
6079 6940 0.255033 CCACCCCCTAAGTACCTTGC 59.745 60.000 0.00 0.00 0.00 4.01
6080 6941 0.255033 CACCCCCTAAGTACCTTGCC 59.745 60.000 0.00 0.00 0.00 4.52
6081 6942 0.120581 ACCCCCTAAGTACCTTGCCT 59.879 55.000 0.00 0.00 0.00 4.75
6082 6943 1.296002 CCCCCTAAGTACCTTGCCTT 58.704 55.000 0.00 0.00 0.00 4.35
6083 6944 1.064685 CCCCCTAAGTACCTTGCCTTG 60.065 57.143 0.00 0.00 0.00 3.61
6084 6945 1.633945 CCCCTAAGTACCTTGCCTTGT 59.366 52.381 0.00 0.00 0.00 3.16
6085 6946 2.841881 CCCCTAAGTACCTTGCCTTGTA 59.158 50.000 0.00 0.00 0.00 2.41
6086 6947 3.370209 CCCCTAAGTACCTTGCCTTGTAC 60.370 52.174 0.00 0.00 38.06 2.90
6087 6948 3.262405 CCCTAAGTACCTTGCCTTGTACA 59.738 47.826 0.00 0.00 39.79 2.90
6088 6949 4.263156 CCCTAAGTACCTTGCCTTGTACAA 60.263 45.833 8.28 8.28 39.79 2.41
6089 6950 4.935808 CCTAAGTACCTTGCCTTGTACAAG 59.064 45.833 25.79 25.79 43.36 3.16
6103 6964 1.069227 GTACAAGGCCTGAAAAGTGCG 60.069 52.381 5.69 0.00 0.00 5.34
6112 6973 3.057526 GCCTGAAAAGTGCGGAGTAAAAT 60.058 43.478 0.00 0.00 0.00 1.82
6131 6992 0.756294 TGGTGAAACTCCTCGCTTCA 59.244 50.000 0.00 0.00 36.74 3.02
6135 6996 2.808543 GTGAAACTCCTCGCTTCATGTT 59.191 45.455 0.00 0.00 32.08 2.71
6191 7053 1.304052 TTGTTGCGGGGAATCAGGG 60.304 57.895 0.00 0.00 0.00 4.45
6192 7054 3.140814 GTTGCGGGGAATCAGGGC 61.141 66.667 0.00 0.00 0.00 5.19
6193 7055 3.338250 TTGCGGGGAATCAGGGCT 61.338 61.111 0.00 0.00 0.00 5.19
6194 7056 2.917897 TTGCGGGGAATCAGGGCTT 61.918 57.895 0.00 0.00 0.00 4.35
6243 7105 2.976356 AGGCCCGACGGTCTTAAC 59.024 61.111 13.94 0.00 43.64 2.01
6425 7287 4.194640 ACGAATGAGATTGATGTCCCAAG 58.805 43.478 0.00 0.00 0.00 3.61
6458 9322 3.898123 AGCTATATCCGACATGTCACCTT 59.102 43.478 24.93 9.32 0.00 3.50
6486 9350 1.671742 GGTCGGCTCTTTGGTCTCA 59.328 57.895 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 9.745018 AATCGGTGGATCATTAATTGATAGATT 57.255 29.630 0.00 0.00 45.29 2.40
29 30 7.941790 TGGATTAATCGGTGGATCATTAATTGA 59.058 33.333 9.32 0.00 34.34 2.57
30 31 8.109705 TGGATTAATCGGTGGATCATTAATTG 57.890 34.615 9.32 0.00 34.34 2.32
31 32 7.944554 ACTGGATTAATCGGTGGATCATTAATT 59.055 33.333 9.32 0.00 34.34 1.40
32 33 7.461749 ACTGGATTAATCGGTGGATCATTAAT 58.538 34.615 9.32 7.38 36.05 1.40
33 34 6.837312 ACTGGATTAATCGGTGGATCATTAA 58.163 36.000 9.32 0.00 30.81 1.40
34 35 6.433847 ACTGGATTAATCGGTGGATCATTA 57.566 37.500 9.32 0.00 30.81 1.90
35 36 5.310409 ACTGGATTAATCGGTGGATCATT 57.690 39.130 9.32 0.00 30.81 2.57
36 37 4.982241 ACTGGATTAATCGGTGGATCAT 57.018 40.909 9.32 0.00 30.81 2.45
37 38 4.771114 AACTGGATTAATCGGTGGATCA 57.229 40.909 9.32 0.00 30.81 2.92
38 39 8.842358 TTATTAACTGGATTAATCGGTGGATC 57.158 34.615 9.32 0.00 41.66 3.36
39 40 7.390718 GCTTATTAACTGGATTAATCGGTGGAT 59.609 37.037 9.32 10.02 41.66 3.41
40 41 6.708949 GCTTATTAACTGGATTAATCGGTGGA 59.291 38.462 9.32 4.47 41.66 4.02
41 42 6.072673 GGCTTATTAACTGGATTAATCGGTGG 60.073 42.308 9.32 2.49 41.66 4.61
42 43 6.347402 CGGCTTATTAACTGGATTAATCGGTG 60.347 42.308 9.32 4.72 41.66 4.94
43 44 5.699458 CGGCTTATTAACTGGATTAATCGGT 59.301 40.000 9.32 7.91 41.66 4.69
44 45 5.929992 TCGGCTTATTAACTGGATTAATCGG 59.070 40.000 9.32 7.32 41.66 4.18
45 46 7.596749 ATCGGCTTATTAACTGGATTAATCG 57.403 36.000 9.32 0.00 41.66 3.34
46 47 8.999431 TGAATCGGCTTATTAACTGGATTAATC 58.001 33.333 6.93 6.93 41.66 1.75
47 48 8.784043 GTGAATCGGCTTATTAACTGGATTAAT 58.216 33.333 0.00 0.00 44.22 1.40
48 49 7.227910 GGTGAATCGGCTTATTAACTGGATTAA 59.772 37.037 0.00 0.00 37.18 1.40
49 50 6.708949 GGTGAATCGGCTTATTAACTGGATTA 59.291 38.462 0.00 0.00 0.00 1.75
50 51 5.531287 GGTGAATCGGCTTATTAACTGGATT 59.469 40.000 0.00 0.00 0.00 3.01
51 52 5.063880 GGTGAATCGGCTTATTAACTGGAT 58.936 41.667 0.00 0.00 0.00 3.41
52 53 4.448210 GGTGAATCGGCTTATTAACTGGA 58.552 43.478 0.00 0.00 0.00 3.86
53 54 3.247648 CGGTGAATCGGCTTATTAACTGG 59.752 47.826 1.78 0.00 0.00 4.00
54 55 4.116961 TCGGTGAATCGGCTTATTAACTG 58.883 43.478 2.91 2.91 30.45 3.16
55 56 4.395959 TCGGTGAATCGGCTTATTAACT 57.604 40.909 0.00 0.00 0.00 2.24
56 57 5.668558 AATCGGTGAATCGGCTTATTAAC 57.331 39.130 0.00 0.00 0.00 2.01
57 58 7.148705 CGATTAATCGGTGAATCGGCTTATTAA 60.149 37.037 26.61 0.63 46.73 1.40
58 59 6.309494 CGATTAATCGGTGAATCGGCTTATTA 59.691 38.462 26.61 0.00 46.73 0.98
59 60 5.120208 CGATTAATCGGTGAATCGGCTTATT 59.880 40.000 26.61 0.00 46.73 1.40
60 61 4.625742 CGATTAATCGGTGAATCGGCTTAT 59.374 41.667 26.61 0.00 46.73 1.73
61 62 3.985279 CGATTAATCGGTGAATCGGCTTA 59.015 43.478 26.61 0.00 46.73 3.09
62 63 2.800544 CGATTAATCGGTGAATCGGCTT 59.199 45.455 26.61 0.00 46.73 4.35
63 64 2.404215 CGATTAATCGGTGAATCGGCT 58.596 47.619 26.61 0.00 46.73 5.52
64 65 2.856091 CGATTAATCGGTGAATCGGC 57.144 50.000 26.61 0.00 46.73 5.54
75 76 4.448210 TGGCTTGGGAGTAACGATTAATC 58.552 43.478 5.30 5.30 0.00 1.75
76 77 4.497291 TGGCTTGGGAGTAACGATTAAT 57.503 40.909 0.00 0.00 0.00 1.40
77 78 3.985019 TGGCTTGGGAGTAACGATTAA 57.015 42.857 0.00 0.00 0.00 1.40
78 79 3.602483 GTTGGCTTGGGAGTAACGATTA 58.398 45.455 0.00 0.00 0.00 1.75
79 80 2.433436 GTTGGCTTGGGAGTAACGATT 58.567 47.619 0.00 0.00 0.00 3.34
80 81 1.339727 GGTTGGCTTGGGAGTAACGAT 60.340 52.381 0.00 0.00 0.00 3.73
81 82 0.035739 GGTTGGCTTGGGAGTAACGA 59.964 55.000 0.00 0.00 0.00 3.85
82 83 1.296056 CGGTTGGCTTGGGAGTAACG 61.296 60.000 0.00 0.00 0.00 3.18
83 84 0.035739 TCGGTTGGCTTGGGAGTAAC 59.964 55.000 0.00 0.00 0.00 2.50
84 85 0.323629 CTCGGTTGGCTTGGGAGTAA 59.676 55.000 0.00 0.00 0.00 2.24
85 86 1.980052 CTCGGTTGGCTTGGGAGTA 59.020 57.895 0.00 0.00 0.00 2.59
86 87 2.750350 CTCGGTTGGCTTGGGAGT 59.250 61.111 0.00 0.00 0.00 3.85
87 88 2.747855 GCTCGGTTGGCTTGGGAG 60.748 66.667 0.00 0.00 0.00 4.30
88 89 3.551496 CTGCTCGGTTGGCTTGGGA 62.551 63.158 0.00 0.00 0.00 4.37
89 90 3.058160 CTGCTCGGTTGGCTTGGG 61.058 66.667 0.00 0.00 0.00 4.12
90 91 2.803155 TAGCTGCTCGGTTGGCTTGG 62.803 60.000 4.91 0.00 36.40 3.61
91 92 0.745845 ATAGCTGCTCGGTTGGCTTG 60.746 55.000 4.91 0.00 36.40 4.01
92 93 0.745845 CATAGCTGCTCGGTTGGCTT 60.746 55.000 4.91 0.00 36.40 4.35
93 94 1.153289 CATAGCTGCTCGGTTGGCT 60.153 57.895 4.91 0.00 38.62 4.75
94 95 1.153369 TCATAGCTGCTCGGTTGGC 60.153 57.895 4.91 0.00 0.00 4.52
95 96 0.531532 CCTCATAGCTGCTCGGTTGG 60.532 60.000 4.91 0.00 0.00 3.77
96 97 0.461548 TCCTCATAGCTGCTCGGTTG 59.538 55.000 4.91 0.27 0.00 3.77
97 98 1.195115 TTCCTCATAGCTGCTCGGTT 58.805 50.000 4.91 0.00 0.00 4.44
98 99 1.134670 GTTTCCTCATAGCTGCTCGGT 60.135 52.381 4.91 0.00 0.00 4.69
99 100 1.134699 TGTTTCCTCATAGCTGCTCGG 60.135 52.381 4.91 3.07 0.00 4.63
100 101 2.299993 TGTTTCCTCATAGCTGCTCG 57.700 50.000 4.91 0.00 0.00 5.03
101 102 3.944015 ACAATGTTTCCTCATAGCTGCTC 59.056 43.478 4.91 0.00 0.00 4.26
102 103 3.960571 ACAATGTTTCCTCATAGCTGCT 58.039 40.909 7.57 7.57 0.00 4.24
103 104 4.878397 ACTACAATGTTTCCTCATAGCTGC 59.122 41.667 0.00 0.00 0.00 5.25
104 105 6.199154 CGTACTACAATGTTTCCTCATAGCTG 59.801 42.308 0.00 0.00 0.00 4.24
105 106 6.127423 ACGTACTACAATGTTTCCTCATAGCT 60.127 38.462 0.00 0.00 0.00 3.32
106 107 6.040878 ACGTACTACAATGTTTCCTCATAGC 58.959 40.000 0.00 0.00 0.00 2.97
107 108 7.481642 AGACGTACTACAATGTTTCCTCATAG 58.518 38.462 0.00 0.00 0.00 2.23
108 109 7.400599 AGACGTACTACAATGTTTCCTCATA 57.599 36.000 0.00 0.00 0.00 2.15
109 110 6.282199 AGACGTACTACAATGTTTCCTCAT 57.718 37.500 0.00 0.00 0.00 2.90
110 111 5.717078 AGACGTACTACAATGTTTCCTCA 57.283 39.130 0.00 0.00 0.00 3.86
111 112 7.478322 TGATAGACGTACTACAATGTTTCCTC 58.522 38.462 0.00 0.00 33.62 3.71
112 113 7.400599 TGATAGACGTACTACAATGTTTCCT 57.599 36.000 0.00 0.00 33.62 3.36
113 114 7.919091 TGATGATAGACGTACTACAATGTTTCC 59.081 37.037 0.00 0.00 33.62 3.13
114 115 8.851960 TGATGATAGACGTACTACAATGTTTC 57.148 34.615 0.00 0.00 33.62 2.78
117 118 8.237949 GCTATGATGATAGACGTACTACAATGT 58.762 37.037 3.06 0.00 34.44 2.71
118 119 8.237267 TGCTATGATGATAGACGTACTACAATG 58.763 37.037 3.06 0.00 34.44 2.82
119 120 8.336801 TGCTATGATGATAGACGTACTACAAT 57.663 34.615 3.06 0.00 34.44 2.71
120 121 7.739498 TGCTATGATGATAGACGTACTACAA 57.261 36.000 3.06 0.00 34.44 2.41
121 122 7.626452 GCATGCTATGATGATAGACGTACTACA 60.626 40.741 11.37 0.00 34.44 2.74
122 123 6.689241 GCATGCTATGATGATAGACGTACTAC 59.311 42.308 11.37 0.00 34.44 2.73
123 124 6.374333 TGCATGCTATGATGATAGACGTACTA 59.626 38.462 20.33 0.00 34.44 1.82
124 125 5.183904 TGCATGCTATGATGATAGACGTACT 59.816 40.000 20.33 0.00 34.44 2.73
125 126 5.402398 TGCATGCTATGATGATAGACGTAC 58.598 41.667 20.33 0.00 34.44 3.67
126 127 5.643379 TGCATGCTATGATGATAGACGTA 57.357 39.130 20.33 0.00 34.44 3.57
127 128 4.525912 TGCATGCTATGATGATAGACGT 57.474 40.909 20.33 0.00 34.44 4.34
128 129 5.391060 CATGCATGCTATGATGATAGACG 57.609 43.478 20.33 0.00 34.44 4.18
143 144 2.516695 TGGCTACGGGCATGCATG 60.517 61.111 22.70 22.70 43.20 4.06
149 150 1.137479 GTACTTATGTGGCTACGGGCA 59.863 52.381 0.00 0.00 45.89 5.36
150 151 1.137479 TGTACTTATGTGGCTACGGGC 59.863 52.381 0.00 0.00 40.90 6.13
151 152 3.530265 TTGTACTTATGTGGCTACGGG 57.470 47.619 0.00 0.00 0.00 5.28
152 153 6.278363 AGTATTTGTACTTATGTGGCTACGG 58.722 40.000 0.00 0.00 0.00 4.02
153 154 7.766219 AAGTATTTGTACTTATGTGGCTACG 57.234 36.000 0.00 0.00 38.41 3.51
154 155 9.590451 TGTAAGTATTTGTACTTATGTGGCTAC 57.410 33.333 10.26 0.00 42.41 3.58
156 157 9.509956 TTTGTAAGTATTTGTACTTATGTGGCT 57.490 29.630 10.26 0.00 42.41 4.75
157 158 9.769093 CTTTGTAAGTATTTGTACTTATGTGGC 57.231 33.333 10.26 0.75 42.41 5.01
164 165 9.392259 GCCTATCCTTTGTAAGTATTTGTACTT 57.608 33.333 6.16 6.16 42.38 2.24
165 166 8.545472 TGCCTATCCTTTGTAAGTATTTGTACT 58.455 33.333 0.00 0.00 0.00 2.73
166 167 8.610035 GTGCCTATCCTTTGTAAGTATTTGTAC 58.390 37.037 0.00 0.00 0.00 2.90
167 168 8.545472 AGTGCCTATCCTTTGTAAGTATTTGTA 58.455 33.333 0.00 0.00 0.00 2.41
168 169 7.336931 CAGTGCCTATCCTTTGTAAGTATTTGT 59.663 37.037 0.00 0.00 0.00 2.83
169 170 7.552687 TCAGTGCCTATCCTTTGTAAGTATTTG 59.447 37.037 0.00 0.00 0.00 2.32
170 171 7.630082 TCAGTGCCTATCCTTTGTAAGTATTT 58.370 34.615 0.00 0.00 0.00 1.40
171 172 7.195374 TCAGTGCCTATCCTTTGTAAGTATT 57.805 36.000 0.00 0.00 0.00 1.89
172 173 6.808321 TCAGTGCCTATCCTTTGTAAGTAT 57.192 37.500 0.00 0.00 0.00 2.12
173 174 6.614694 TTCAGTGCCTATCCTTTGTAAGTA 57.385 37.500 0.00 0.00 0.00 2.24
174 175 5.499004 TTCAGTGCCTATCCTTTGTAAGT 57.501 39.130 0.00 0.00 0.00 2.24
175 176 6.369059 CATTCAGTGCCTATCCTTTGTAAG 57.631 41.667 0.00 0.00 0.00 2.34
190 191 4.421058 CTCATTCAATGGTGCATTCAGTG 58.579 43.478 12.26 12.26 31.05 3.66
191 192 3.119245 GCTCATTCAATGGTGCATTCAGT 60.119 43.478 10.19 0.00 31.05 3.41
192 193 3.444916 GCTCATTCAATGGTGCATTCAG 58.555 45.455 10.19 0.00 31.05 3.02
193 194 2.159352 CGCTCATTCAATGGTGCATTCA 60.159 45.455 13.87 0.00 31.05 2.57
194 195 2.456989 CGCTCATTCAATGGTGCATTC 58.543 47.619 13.87 0.00 31.05 2.67
195 196 1.470285 GCGCTCATTCAATGGTGCATT 60.470 47.619 15.48 0.00 37.12 3.56
196 197 0.101759 GCGCTCATTCAATGGTGCAT 59.898 50.000 15.48 0.00 37.12 3.96
197 198 1.507630 GCGCTCATTCAATGGTGCA 59.492 52.632 15.48 0.00 37.12 4.57
198 199 1.584483 CGCGCTCATTCAATGGTGC 60.584 57.895 5.56 12.06 35.24 5.01
199 200 0.247814 GTCGCGCTCATTCAATGGTG 60.248 55.000 5.56 0.00 0.00 4.17
200 201 0.673333 TGTCGCGCTCATTCAATGGT 60.673 50.000 5.56 0.00 0.00 3.55
201 202 0.447406 TTGTCGCGCTCATTCAATGG 59.553 50.000 5.56 0.00 0.00 3.16
202 203 1.530441 CCTTGTCGCGCTCATTCAATG 60.530 52.381 5.56 0.00 0.00 2.82
203 204 0.729116 CCTTGTCGCGCTCATTCAAT 59.271 50.000 5.56 0.00 0.00 2.57
204 205 0.320334 TCCTTGTCGCGCTCATTCAA 60.320 50.000 5.56 2.84 0.00 2.69
205 206 0.320334 TTCCTTGTCGCGCTCATTCA 60.320 50.000 5.56 0.00 0.00 2.57
206 207 1.009829 ATTCCTTGTCGCGCTCATTC 58.990 50.000 5.56 0.00 0.00 2.67
207 208 0.729116 CATTCCTTGTCGCGCTCATT 59.271 50.000 5.56 0.00 0.00 2.57
208 209 1.091771 CCATTCCTTGTCGCGCTCAT 61.092 55.000 5.56 0.00 0.00 2.90
209 210 1.741401 CCATTCCTTGTCGCGCTCA 60.741 57.895 5.56 1.29 0.00 4.26
210 211 3.093278 CCATTCCTTGTCGCGCTC 58.907 61.111 5.56 0.00 0.00 5.03
211 212 3.127533 GCCATTCCTTGTCGCGCT 61.128 61.111 5.56 0.00 0.00 5.92
212 213 3.386867 CTGCCATTCCTTGTCGCGC 62.387 63.158 0.00 0.00 0.00 6.86
213 214 2.034879 ACTGCCATTCCTTGTCGCG 61.035 57.895 0.00 0.00 0.00 5.87
214 215 1.503542 CACTGCCATTCCTTGTCGC 59.496 57.895 0.00 0.00 0.00 5.19
215 216 1.926511 GCCACTGCCATTCCTTGTCG 61.927 60.000 0.00 0.00 0.00 4.35
216 217 0.610232 AGCCACTGCCATTCCTTGTC 60.610 55.000 0.00 0.00 38.69 3.18
217 218 0.896940 CAGCCACTGCCATTCCTTGT 60.897 55.000 0.00 0.00 38.69 3.16
218 219 0.609957 TCAGCCACTGCCATTCCTTG 60.610 55.000 0.00 0.00 38.69 3.61
219 220 0.333993 ATCAGCCACTGCCATTCCTT 59.666 50.000 0.00 0.00 38.69 3.36
220 221 1.216064 TATCAGCCACTGCCATTCCT 58.784 50.000 0.00 0.00 38.69 3.36
221 222 1.678101 GTTATCAGCCACTGCCATTCC 59.322 52.381 0.00 0.00 38.69 3.01
222 223 1.331756 CGTTATCAGCCACTGCCATTC 59.668 52.381 0.00 0.00 38.69 2.67
223 224 1.340017 ACGTTATCAGCCACTGCCATT 60.340 47.619 0.00 0.00 38.69 3.16
224 225 0.253044 ACGTTATCAGCCACTGCCAT 59.747 50.000 0.00 0.00 38.69 4.40
225 226 0.673333 CACGTTATCAGCCACTGCCA 60.673 55.000 0.00 0.00 38.69 4.92
226 227 1.369091 CCACGTTATCAGCCACTGCC 61.369 60.000 0.00 0.00 38.69 4.85
227 228 1.369091 CCCACGTTATCAGCCACTGC 61.369 60.000 0.00 0.00 37.95 4.40
228 229 0.744414 CCCCACGTTATCAGCCACTG 60.744 60.000 0.00 0.00 0.00 3.66
229 230 1.198759 ACCCCACGTTATCAGCCACT 61.199 55.000 0.00 0.00 0.00 4.00
230 231 1.024579 CACCCCACGTTATCAGCCAC 61.025 60.000 0.00 0.00 0.00 5.01
231 232 1.298340 CACCCCACGTTATCAGCCA 59.702 57.895 0.00 0.00 0.00 4.75
232 233 2.112815 GCACCCCACGTTATCAGCC 61.113 63.158 0.00 0.00 0.00 4.85
233 234 2.461110 CGCACCCCACGTTATCAGC 61.461 63.158 0.00 0.00 0.00 4.26
234 235 1.813753 CCGCACCCCACGTTATCAG 60.814 63.158 0.00 0.00 0.00 2.90
235 236 2.266372 CCGCACCCCACGTTATCA 59.734 61.111 0.00 0.00 0.00 2.15
236 237 2.512974 CCCGCACCCCACGTTATC 60.513 66.667 0.00 0.00 0.00 1.75
237 238 4.104183 CCCCGCACCCCACGTTAT 62.104 66.667 0.00 0.00 0.00 1.89
249 250 2.109181 GTAGGATCTGCACCCCGC 59.891 66.667 0.00 0.00 42.89 6.13
250 251 2.822399 GGTAGGATCTGCACCCCG 59.178 66.667 0.00 0.00 0.00 5.73
251 252 2.029307 GACGGTAGGATCTGCACCCC 62.029 65.000 0.00 0.00 0.00 4.95
252 253 1.327690 TGACGGTAGGATCTGCACCC 61.328 60.000 0.00 0.00 0.00 4.61
253 254 0.535335 TTGACGGTAGGATCTGCACC 59.465 55.000 0.00 0.00 0.00 5.01
254 255 1.471676 CCTTGACGGTAGGATCTGCAC 60.472 57.143 0.00 0.00 34.56 4.57
255 256 0.824109 CCTTGACGGTAGGATCTGCA 59.176 55.000 0.00 0.00 34.56 4.41
256 257 1.112113 TCCTTGACGGTAGGATCTGC 58.888 55.000 0.00 0.00 36.88 4.26
257 258 2.100197 TGTCCTTGACGGTAGGATCTG 58.900 52.381 3.09 0.00 43.39 2.90
258 259 2.100989 GTGTCCTTGACGGTAGGATCT 58.899 52.381 3.09 0.00 43.39 2.75
259 260 2.100989 AGTGTCCTTGACGGTAGGATC 58.899 52.381 3.09 1.33 43.39 3.36
260 261 1.825474 CAGTGTCCTTGACGGTAGGAT 59.175 52.381 3.09 0.00 43.39 3.24
261 262 1.254026 CAGTGTCCTTGACGGTAGGA 58.746 55.000 0.00 0.00 39.46 2.94
262 263 0.246635 CCAGTGTCCTTGACGGTAGG 59.753 60.000 0.00 0.00 34.95 3.18
263 264 0.966920 ACCAGTGTCCTTGACGGTAG 59.033 55.000 0.00 0.00 34.95 3.18
264 265 0.677288 CACCAGTGTCCTTGACGGTA 59.323 55.000 0.00 0.00 34.95 4.02
265 266 1.445942 CACCAGTGTCCTTGACGGT 59.554 57.895 0.00 0.00 34.95 4.83
266 267 1.301716 CCACCAGTGTCCTTGACGG 60.302 63.158 0.00 0.00 34.95 4.79
267 268 0.677288 TACCACCAGTGTCCTTGACG 59.323 55.000 0.00 0.00 34.95 4.35
268 269 1.002087 CCTACCACCAGTGTCCTTGAC 59.998 57.143 0.00 0.00 0.00 3.18
269 270 1.348064 CCTACCACCAGTGTCCTTGA 58.652 55.000 0.00 0.00 0.00 3.02
270 271 0.324943 CCCTACCACCAGTGTCCTTG 59.675 60.000 0.00 0.00 0.00 3.61
271 272 0.104620 ACCCTACCACCAGTGTCCTT 60.105 55.000 0.00 0.00 0.00 3.36
272 273 0.788383 TACCCTACCACCAGTGTCCT 59.212 55.000 0.00 0.00 0.00 3.85
273 274 1.875488 ATACCCTACCACCAGTGTCC 58.125 55.000 0.00 0.00 0.00 4.02
274 275 5.279356 GCTATTATACCCTACCACCAGTGTC 60.279 48.000 0.00 0.00 0.00 3.67
275 276 4.591924 GCTATTATACCCTACCACCAGTGT 59.408 45.833 0.00 0.00 0.00 3.55
276 277 4.020485 GGCTATTATACCCTACCACCAGTG 60.020 50.000 0.00 0.00 0.00 3.66
277 278 4.140519 AGGCTATTATACCCTACCACCAGT 60.141 45.833 0.00 0.00 0.00 4.00
278 279 4.426704 AGGCTATTATACCCTACCACCAG 58.573 47.826 0.00 0.00 0.00 4.00
279 280 4.497100 AGGCTATTATACCCTACCACCA 57.503 45.455 0.00 0.00 0.00 4.17
280 281 5.301298 CGATAGGCTATTATACCCTACCACC 59.699 48.000 8.71 0.00 34.29 4.61
281 282 5.221204 GCGATAGGCTATTATACCCTACCAC 60.221 48.000 8.71 0.00 39.11 4.16
282 283 4.891756 GCGATAGGCTATTATACCCTACCA 59.108 45.833 8.71 0.00 39.11 3.25
283 284 5.450592 GCGATAGGCTATTATACCCTACC 57.549 47.826 8.71 0.00 39.11 3.18
298 299 2.348666 CGTCAAAGTTTCTGGCGATAGG 59.651 50.000 0.00 0.00 44.51 2.57
299 300 2.348666 CCGTCAAAGTTTCTGGCGATAG 59.651 50.000 3.19 0.00 44.51 2.08
300 301 2.289195 ACCGTCAAAGTTTCTGGCGATA 60.289 45.455 3.19 0.00 44.51 2.92
301 302 1.156736 CCGTCAAAGTTTCTGGCGAT 58.843 50.000 3.19 0.00 44.51 4.58
302 303 0.179067 ACCGTCAAAGTTTCTGGCGA 60.179 50.000 3.19 0.00 44.51 5.54
303 304 1.459592 CTACCGTCAAAGTTTCTGGCG 59.540 52.381 0.00 0.00 41.48 5.69
304 305 1.804748 CCTACCGTCAAAGTTTCTGGC 59.195 52.381 0.00 0.00 0.00 4.85
305 306 2.224450 ACCCTACCGTCAAAGTTTCTGG 60.224 50.000 0.00 0.00 0.00 3.86
306 307 3.121738 ACCCTACCGTCAAAGTTTCTG 57.878 47.619 0.00 0.00 0.00 3.02
307 308 5.494390 AATACCCTACCGTCAAAGTTTCT 57.506 39.130 0.00 0.00 0.00 2.52
308 309 6.564709 AAAATACCCTACCGTCAAAGTTTC 57.435 37.500 0.00 0.00 0.00 2.78
309 310 6.546772 TGAAAAATACCCTACCGTCAAAGTTT 59.453 34.615 0.00 0.00 0.00 2.66
310 311 6.016860 GTGAAAAATACCCTACCGTCAAAGTT 60.017 38.462 0.00 0.00 0.00 2.66
311 312 5.471116 GTGAAAAATACCCTACCGTCAAAGT 59.529 40.000 0.00 0.00 0.00 2.66
312 313 5.390145 CGTGAAAAATACCCTACCGTCAAAG 60.390 44.000 0.00 0.00 0.00 2.77
313 314 4.451774 CGTGAAAAATACCCTACCGTCAAA 59.548 41.667 0.00 0.00 0.00 2.69
314 315 3.995705 CGTGAAAAATACCCTACCGTCAA 59.004 43.478 0.00 0.00 0.00 3.18
315 316 3.006752 ACGTGAAAAATACCCTACCGTCA 59.993 43.478 0.00 0.00 0.00 4.35
316 317 3.588955 ACGTGAAAAATACCCTACCGTC 58.411 45.455 0.00 0.00 0.00 4.79
317 318 3.683365 ACGTGAAAAATACCCTACCGT 57.317 42.857 0.00 0.00 0.00 4.83
318 319 4.031652 CGTAACGTGAAAAATACCCTACCG 59.968 45.833 0.00 0.00 0.00 4.02
319 320 5.062183 GTCGTAACGTGAAAAATACCCTACC 59.938 44.000 0.00 0.00 0.00 3.18
320 321 5.220024 CGTCGTAACGTGAAAAATACCCTAC 60.220 44.000 0.00 0.00 43.94 3.18
321 322 4.856487 CGTCGTAACGTGAAAAATACCCTA 59.144 41.667 0.00 0.00 43.94 3.53
322 323 3.674753 CGTCGTAACGTGAAAAATACCCT 59.325 43.478 0.00 0.00 43.94 4.34
323 324 3.977536 CGTCGTAACGTGAAAAATACCC 58.022 45.455 0.00 0.00 43.94 3.69
340 341 2.253392 AGAGTTTAACTACGCCGTCG 57.747 50.000 0.00 0.00 42.43 5.12
341 342 3.430008 GGTAGAGTTTAACTACGCCGTC 58.570 50.000 0.00 0.00 40.47 4.79
342 343 2.159517 CGGTAGAGTTTAACTACGCCGT 60.160 50.000 18.52 0.00 40.47 5.68
343 344 2.159517 ACGGTAGAGTTTAACTACGCCG 60.160 50.000 22.35 22.35 40.47 6.46
344 345 3.119849 TGACGGTAGAGTTTAACTACGCC 60.120 47.826 0.00 0.00 40.47 5.68
345 346 3.848582 GTGACGGTAGAGTTTAACTACGC 59.151 47.826 0.00 0.00 40.47 4.42
346 347 5.034554 TGTGACGGTAGAGTTTAACTACG 57.965 43.478 0.00 3.75 40.47 3.51
347 348 6.144563 GGTTTGTGACGGTAGAGTTTAACTAC 59.855 42.308 0.00 0.00 39.32 2.73
348 349 6.215845 GGTTTGTGACGGTAGAGTTTAACTA 58.784 40.000 0.00 0.00 0.00 2.24
349 350 5.052481 GGTTTGTGACGGTAGAGTTTAACT 58.948 41.667 0.00 0.00 0.00 2.24
350 351 4.084900 CGGTTTGTGACGGTAGAGTTTAAC 60.085 45.833 0.00 0.00 0.00 2.01
351 352 4.050553 CGGTTTGTGACGGTAGAGTTTAA 58.949 43.478 0.00 0.00 0.00 1.52
352 353 3.068024 ACGGTTTGTGACGGTAGAGTTTA 59.932 43.478 0.00 0.00 39.70 2.01
353 354 2.159057 ACGGTTTGTGACGGTAGAGTTT 60.159 45.455 0.00 0.00 39.70 2.66
354 355 1.410153 ACGGTTTGTGACGGTAGAGTT 59.590 47.619 0.00 0.00 39.70 3.01
355 356 1.035139 ACGGTTTGTGACGGTAGAGT 58.965 50.000 0.00 0.00 39.70 3.24
356 357 3.879912 ACGGTTTGTGACGGTAGAG 57.120 52.632 0.00 0.00 39.70 2.43
372 373 1.790623 GTATAACATGCTACCGCCACG 59.209 52.381 0.00 0.00 34.43 4.94
373 374 2.140717 GGTATAACATGCTACCGCCAC 58.859 52.381 0.00 0.00 34.43 5.01
374 375 1.763545 TGGTATAACATGCTACCGCCA 59.236 47.619 12.52 4.06 40.28 5.69
375 376 2.536761 TGGTATAACATGCTACCGCC 57.463 50.000 12.52 1.88 40.28 6.13
384 385 0.394938 TCGGCGGCATGGTATAACAT 59.605 50.000 10.53 0.00 0.00 2.71
385 386 0.249699 CTCGGCGGCATGGTATAACA 60.250 55.000 10.53 0.00 0.00 2.41
386 387 0.032952 TCTCGGCGGCATGGTATAAC 59.967 55.000 10.53 0.00 0.00 1.89
387 388 0.753867 TTCTCGGCGGCATGGTATAA 59.246 50.000 10.53 0.00 0.00 0.98
388 389 0.032952 GTTCTCGGCGGCATGGTATA 59.967 55.000 10.53 0.00 0.00 1.47
389 390 1.227556 GTTCTCGGCGGCATGGTAT 60.228 57.895 10.53 0.00 0.00 2.73
390 391 1.038681 TAGTTCTCGGCGGCATGGTA 61.039 55.000 10.53 0.00 0.00 3.25
391 392 1.686325 ATAGTTCTCGGCGGCATGGT 61.686 55.000 10.53 0.00 0.00 3.55
392 393 1.069765 ATAGTTCTCGGCGGCATGG 59.930 57.895 10.53 0.00 0.00 3.66
393 394 0.249447 TCATAGTTCTCGGCGGCATG 60.249 55.000 10.53 3.14 0.00 4.06
394 395 0.249489 GTCATAGTTCTCGGCGGCAT 60.249 55.000 10.53 0.00 0.00 4.40
395 396 1.141019 GTCATAGTTCTCGGCGGCA 59.859 57.895 10.53 0.00 0.00 5.69
396 397 1.944676 CGTCATAGTTCTCGGCGGC 60.945 63.158 7.21 0.00 0.00 6.53
397 398 1.299165 CCGTCATAGTTCTCGGCGG 60.299 63.158 7.21 0.00 36.68 6.13
398 399 0.659427 TACCGTCATAGTTCTCGGCG 59.341 55.000 0.00 0.00 45.76 6.46
399 400 1.945394 TCTACCGTCATAGTTCTCGGC 59.055 52.381 0.00 0.00 45.76 5.54
400 401 4.627611 TTTCTACCGTCATAGTTCTCGG 57.372 45.455 0.00 0.00 46.98 4.63
440 441 7.524367 GCCGAATCTGATCCCATATTGATTTTT 60.524 37.037 0.00 0.00 0.00 1.94
441 442 6.071728 GCCGAATCTGATCCCATATTGATTTT 60.072 38.462 0.00 0.00 0.00 1.82
442 443 5.416952 GCCGAATCTGATCCCATATTGATTT 59.583 40.000 0.00 0.00 0.00 2.17
443 444 4.946157 GCCGAATCTGATCCCATATTGATT 59.054 41.667 0.00 0.00 0.00 2.57
444 445 4.226846 AGCCGAATCTGATCCCATATTGAT 59.773 41.667 0.00 0.00 0.00 2.57
445 446 3.584406 AGCCGAATCTGATCCCATATTGA 59.416 43.478 0.00 0.00 0.00 2.57
446 447 3.947868 AGCCGAATCTGATCCCATATTG 58.052 45.455 0.00 0.00 0.00 1.90
447 448 5.762179 TTAGCCGAATCTGATCCCATATT 57.238 39.130 0.00 0.00 0.00 1.28
448 449 5.249393 AGTTTAGCCGAATCTGATCCCATAT 59.751 40.000 0.00 0.00 0.00 1.78
449 450 4.593206 AGTTTAGCCGAATCTGATCCCATA 59.407 41.667 0.00 0.00 0.00 2.74
450 451 3.392616 AGTTTAGCCGAATCTGATCCCAT 59.607 43.478 0.00 0.00 0.00 4.00
451 452 2.771943 AGTTTAGCCGAATCTGATCCCA 59.228 45.455 0.00 0.00 0.00 4.37
452 453 3.477210 AGTTTAGCCGAATCTGATCCC 57.523 47.619 0.00 0.00 0.00 3.85
453 454 4.876107 TGAAAGTTTAGCCGAATCTGATCC 59.124 41.667 0.00 0.00 0.00 3.36
454 455 6.422776 TTGAAAGTTTAGCCGAATCTGATC 57.577 37.500 0.00 0.00 0.00 2.92
455 456 6.817765 TTTGAAAGTTTAGCCGAATCTGAT 57.182 33.333 0.00 0.00 0.00 2.90
456 457 6.627395 TTTTGAAAGTTTAGCCGAATCTGA 57.373 33.333 0.00 0.00 0.00 3.27
477 478 7.254421 GGCGAGATTTGATGTTTTGAACTTTTT 60.254 33.333 0.00 0.00 0.00 1.94
478 479 6.200854 GGCGAGATTTGATGTTTTGAACTTTT 59.799 34.615 0.00 0.00 0.00 2.27
479 480 5.691754 GGCGAGATTTGATGTTTTGAACTTT 59.308 36.000 0.00 0.00 0.00 2.66
480 481 5.222631 GGCGAGATTTGATGTTTTGAACTT 58.777 37.500 0.00 0.00 0.00 2.66
481 482 4.613622 CGGCGAGATTTGATGTTTTGAACT 60.614 41.667 0.00 0.00 0.00 3.01
482 483 3.603770 CGGCGAGATTTGATGTTTTGAAC 59.396 43.478 0.00 0.00 0.00 3.18
483 484 3.365868 CCGGCGAGATTTGATGTTTTGAA 60.366 43.478 9.30 0.00 0.00 2.69
484 485 2.161410 CCGGCGAGATTTGATGTTTTGA 59.839 45.455 9.30 0.00 0.00 2.69
485 486 2.518949 CCGGCGAGATTTGATGTTTTG 58.481 47.619 9.30 0.00 0.00 2.44
486 487 1.135402 GCCGGCGAGATTTGATGTTTT 60.135 47.619 12.58 0.00 0.00 2.43
487 488 0.451783 GCCGGCGAGATTTGATGTTT 59.548 50.000 12.58 0.00 0.00 2.83
488 489 0.676466 TGCCGGCGAGATTTGATGTT 60.676 50.000 23.90 0.00 0.00 2.71
489 490 1.078497 TGCCGGCGAGATTTGATGT 60.078 52.632 23.90 0.00 0.00 3.06
490 491 1.353103 GTGCCGGCGAGATTTGATG 59.647 57.895 23.90 0.00 0.00 3.07
491 492 1.819632 GGTGCCGGCGAGATTTGAT 60.820 57.895 23.90 0.00 0.00 2.57
492 493 2.435938 GGTGCCGGCGAGATTTGA 60.436 61.111 23.90 0.00 0.00 2.69
493 494 2.745884 TGGTGCCGGCGAGATTTG 60.746 61.111 23.90 0.00 0.00 2.32
494 495 2.436646 CTGGTGCCGGCGAGATTT 60.437 61.111 23.90 0.00 0.00 2.17
495 496 4.473520 CCTGGTGCCGGCGAGATT 62.474 66.667 23.90 0.00 0.00 2.40
521 522 1.133025 CCATCAATTCAGCCGTCAACC 59.867 52.381 0.00 0.00 0.00 3.77
557 564 1.477685 TTCCACCTTCCTGTCCGTCC 61.478 60.000 0.00 0.00 0.00 4.79
635 655 2.571216 CGAGTCCAGGTTCACGGGT 61.571 63.158 0.00 0.00 35.71 5.28
671 691 6.756074 CCTAAGAGCTGAAGTAAGATTCACTG 59.244 42.308 0.00 0.00 35.40 3.66
674 694 6.859112 ACCTAAGAGCTGAAGTAAGATTCA 57.141 37.500 0.00 0.00 37.60 2.57
684 704 3.758554 GGAATGCAAACCTAAGAGCTGAA 59.241 43.478 0.00 0.00 0.00 3.02
716 736 6.364701 TGAAGAACAGGGATGAGAAAGAAAA 58.635 36.000 0.00 0.00 0.00 2.29
718 738 5.567037 TGAAGAACAGGGATGAGAAAGAA 57.433 39.130 0.00 0.00 0.00 2.52
720 740 5.356470 GGAATGAAGAACAGGGATGAGAAAG 59.644 44.000 0.00 0.00 0.00 2.62
724 745 3.201290 CGGAATGAAGAACAGGGATGAG 58.799 50.000 0.00 0.00 0.00 2.90
727 748 1.916181 ACCGGAATGAAGAACAGGGAT 59.084 47.619 9.46 0.00 0.00 3.85
744 765 0.906775 TAACTAGCCTTTCCCCACCG 59.093 55.000 0.00 0.00 0.00 4.94
864 890 3.872630 GCTTTTTATTCCCTCACCTCCGT 60.873 47.826 0.00 0.00 0.00 4.69
871 897 2.091541 CGCTGGCTTTTTATTCCCTCA 58.908 47.619 0.00 0.00 0.00 3.86
917 943 1.541672 GAGAGGGGAGGAGGAGAGG 59.458 68.421 0.00 0.00 0.00 3.69
918 944 0.998945 AGGAGAGGGGAGGAGGAGAG 60.999 65.000 0.00 0.00 0.00 3.20
919 945 0.996762 GAGGAGAGGGGAGGAGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
920 946 1.541672 GAGGAGAGGGGAGGAGGAG 59.458 68.421 0.00 0.00 0.00 3.69
921 947 2.015726 GGAGGAGAGGGGAGGAGGA 61.016 68.421 0.00 0.00 0.00 3.71
922 948 2.612251 GGAGGAGAGGGGAGGAGG 59.388 72.222 0.00 0.00 0.00 4.30
923 949 2.197324 CGGAGGAGAGGGGAGGAG 59.803 72.222 0.00 0.00 0.00 3.69
924 950 4.144727 GCGGAGGAGAGGGGAGGA 62.145 72.222 0.00 0.00 0.00 3.71
928 954 4.806339 AAGGGCGGAGGAGAGGGG 62.806 72.222 0.00 0.00 0.00 4.79
929 955 3.157949 GAAGGGCGGAGGAGAGGG 61.158 72.222 0.00 0.00 0.00 4.30
990 1028 3.458163 GACGCCATCTCCCCGACA 61.458 66.667 0.00 0.00 0.00 4.35
1138 1182 2.948979 TCCCTGTCATGTCACACAAAAC 59.051 45.455 0.00 0.00 0.00 2.43
1139 1183 3.289407 TCCCTGTCATGTCACACAAAA 57.711 42.857 0.00 0.00 0.00 2.44
1140 1184 3.507162 ATCCCTGTCATGTCACACAAA 57.493 42.857 0.00 0.00 0.00 2.83
1145 1189 1.571919 GCGTATCCCTGTCATGTCAC 58.428 55.000 0.00 0.00 0.00 3.67
1261 1305 1.786441 TGGTTGGATTTGGGAAGAGGT 59.214 47.619 0.00 0.00 0.00 3.85
1267 1311 4.750941 AGAAGAAATGGTTGGATTTGGGA 58.249 39.130 0.00 0.00 0.00 4.37
1279 1323 4.586841 TGTGTTTTGGGGTAGAAGAAATGG 59.413 41.667 0.00 0.00 0.00 3.16
1357 1409 2.598192 CACCTGAAAACGCAAACACAAG 59.402 45.455 0.00 0.00 0.00 3.16
1673 1811 3.988517 GGAAGGAAGACACGTTTAGAGTG 59.011 47.826 0.00 0.00 44.57 3.51
1831 1972 7.630242 TGCTCTGGTTAATCTTAAAGAATGG 57.370 36.000 0.00 0.00 0.00 3.16
1854 1995 8.279800 TGTTTTGACTAATCATCACGTAGTTTG 58.720 33.333 0.00 0.00 33.65 2.93
1875 2016 7.559897 TCCAAGAAAACTCCTCAGTTATGTTTT 59.440 33.333 0.00 0.00 42.45 2.43
1881 2022 5.888982 ACTCCAAGAAAACTCCTCAGTTA 57.111 39.130 0.00 0.00 42.45 2.24
1897 2038 8.877195 AGGTCTCTAAAGTAACATAAACTCCAA 58.123 33.333 0.00 0.00 0.00 3.53
1916 2057 6.888632 TCTTAGATGTACCGTAAAAGGTCTCT 59.111 38.462 0.00 0.00 44.68 3.10
1917 2058 7.093322 TCTTAGATGTACCGTAAAAGGTCTC 57.907 40.000 0.00 0.00 44.68 3.36
1918 2059 7.657023 ATCTTAGATGTACCGTAAAAGGTCT 57.343 36.000 0.00 0.00 44.68 3.85
1924 2065 8.472413 GCCCATATATCTTAGATGTACCGTAAA 58.528 37.037 4.78 0.00 0.00 2.01
1925 2066 7.069085 GGCCCATATATCTTAGATGTACCGTAA 59.931 40.741 4.78 0.00 0.00 3.18
1926 2067 6.548622 GGCCCATATATCTTAGATGTACCGTA 59.451 42.308 4.78 0.00 0.00 4.02
1927 2068 5.363005 GGCCCATATATCTTAGATGTACCGT 59.637 44.000 4.78 0.00 0.00 4.83
1928 2069 5.362717 TGGCCCATATATCTTAGATGTACCG 59.637 44.000 4.78 0.00 0.00 4.02
1929 2070 6.808321 TGGCCCATATATCTTAGATGTACC 57.192 41.667 4.78 1.34 0.00 3.34
1930 2071 7.071196 TGGATGGCCCATATATCTTAGATGTAC 59.929 40.741 4.78 0.00 40.82 2.90
1931 2072 7.138934 TGGATGGCCCATATATCTTAGATGTA 58.861 38.462 4.78 2.92 40.82 2.29
1932 2073 5.972502 TGGATGGCCCATATATCTTAGATGT 59.027 40.000 4.78 0.35 40.82 3.06
1933 2074 6.505048 TGGATGGCCCATATATCTTAGATG 57.495 41.667 4.78 0.00 40.82 2.90
1947 2088 2.430694 GGTTCACTAAAATGGATGGCCC 59.569 50.000 0.00 0.00 0.00 5.80
1948 2089 3.096092 TGGTTCACTAAAATGGATGGCC 58.904 45.455 0.00 0.00 0.00 5.36
1949 2090 4.494484 GTTGGTTCACTAAAATGGATGGC 58.506 43.478 0.00 0.00 0.00 4.40
1950 2091 4.732784 CGTTGGTTCACTAAAATGGATGG 58.267 43.478 0.00 0.00 0.00 3.51
1951 2092 4.165779 GCGTTGGTTCACTAAAATGGATG 58.834 43.478 0.00 0.00 0.00 3.51
1952 2093 3.823873 TGCGTTGGTTCACTAAAATGGAT 59.176 39.130 0.00 0.00 0.00 3.41
1953 2094 3.215151 TGCGTTGGTTCACTAAAATGGA 58.785 40.909 0.00 0.00 0.00 3.41
1954 2095 3.634568 TGCGTTGGTTCACTAAAATGG 57.365 42.857 0.00 0.00 0.00 3.16
1955 2096 3.845775 CGATGCGTTGGTTCACTAAAATG 59.154 43.478 0.00 0.00 0.00 2.32
1956 2097 3.119990 CCGATGCGTTGGTTCACTAAAAT 60.120 43.478 3.73 0.00 0.00 1.82
1957 2098 2.224549 CCGATGCGTTGGTTCACTAAAA 59.775 45.455 3.73 0.00 0.00 1.52
1958 2099 1.801771 CCGATGCGTTGGTTCACTAAA 59.198 47.619 3.73 0.00 0.00 1.85
1959 2100 1.001068 TCCGATGCGTTGGTTCACTAA 59.999 47.619 12.17 0.00 0.00 2.24
1960 2101 0.604073 TCCGATGCGTTGGTTCACTA 59.396 50.000 12.17 0.00 0.00 2.74
1961 2102 0.036388 ATCCGATGCGTTGGTTCACT 60.036 50.000 12.17 0.00 0.00 3.41
1962 2103 0.802494 AATCCGATGCGTTGGTTCAC 59.198 50.000 12.17 0.00 0.00 3.18
1963 2104 0.801872 CAATCCGATGCGTTGGTTCA 59.198 50.000 12.17 0.00 0.00 3.18
1964 2105 1.083489 TCAATCCGATGCGTTGGTTC 58.917 50.000 12.17 0.00 0.00 3.62
1965 2106 0.802494 GTCAATCCGATGCGTTGGTT 59.198 50.000 12.17 0.66 0.00 3.67
1966 2107 1.024579 GGTCAATCCGATGCGTTGGT 61.025 55.000 12.17 0.00 0.00 3.67
1967 2108 1.024046 TGGTCAATCCGATGCGTTGG 61.024 55.000 5.76 5.76 39.52 3.77
1968 2109 0.801872 TTGGTCAATCCGATGCGTTG 59.198 50.000 0.00 0.00 39.52 4.10
1969 2110 0.802494 GTTGGTCAATCCGATGCGTT 59.198 50.000 0.00 0.00 39.52 4.84
1970 2111 0.321210 TGTTGGTCAATCCGATGCGT 60.321 50.000 0.00 0.00 39.52 5.24
1971 2112 0.096976 GTGTTGGTCAATCCGATGCG 59.903 55.000 0.00 0.00 39.52 4.73
1972 2113 0.451783 GGTGTTGGTCAATCCGATGC 59.548 55.000 0.00 0.00 39.52 3.91
1973 2114 1.819928 TGGTGTTGGTCAATCCGATG 58.180 50.000 0.00 0.00 39.52 3.84
1974 2115 2.159382 GTTGGTGTTGGTCAATCCGAT 58.841 47.619 0.00 0.00 39.52 4.18
1975 2116 1.134068 TGTTGGTGTTGGTCAATCCGA 60.134 47.619 0.00 0.00 39.52 4.55
1976 2117 1.266718 CTGTTGGTGTTGGTCAATCCG 59.733 52.381 0.00 0.00 39.52 4.18
1977 2118 2.582052 TCTGTTGGTGTTGGTCAATCC 58.418 47.619 0.00 0.00 0.00 3.01
1978 2119 3.380004 TGTTCTGTTGGTGTTGGTCAATC 59.620 43.478 0.00 0.00 0.00 2.67
1979 2120 3.360867 TGTTCTGTTGGTGTTGGTCAAT 58.639 40.909 0.00 0.00 0.00 2.57
1980 2121 2.752354 CTGTTCTGTTGGTGTTGGTCAA 59.248 45.455 0.00 0.00 0.00 3.18
1981 2122 2.364632 CTGTTCTGTTGGTGTTGGTCA 58.635 47.619 0.00 0.00 0.00 4.02
1982 2123 1.065551 GCTGTTCTGTTGGTGTTGGTC 59.934 52.381 0.00 0.00 0.00 4.02
1983 2124 1.102978 GCTGTTCTGTTGGTGTTGGT 58.897 50.000 0.00 0.00 0.00 3.67
1984 2125 1.102154 TGCTGTTCTGTTGGTGTTGG 58.898 50.000 0.00 0.00 0.00 3.77
1985 2126 2.099592 ACATGCTGTTCTGTTGGTGTTG 59.900 45.455 0.00 0.00 0.00 3.33
2026 2167 9.237187 CCTAAGCTGTCAGATAATAGTCAGATA 57.763 37.037 3.32 0.00 0.00 1.98
2027 2168 7.309744 GCCTAAGCTGTCAGATAATAGTCAGAT 60.310 40.741 3.32 0.00 35.50 2.90
2028 2169 6.015856 GCCTAAGCTGTCAGATAATAGTCAGA 60.016 42.308 3.32 0.00 35.50 3.27
2029 2170 6.155827 GCCTAAGCTGTCAGATAATAGTCAG 58.844 44.000 3.32 0.00 35.50 3.51
2030 2171 5.598417 TGCCTAAGCTGTCAGATAATAGTCA 59.402 40.000 3.32 0.00 40.80 3.41
2031 2172 5.923684 GTGCCTAAGCTGTCAGATAATAGTC 59.076 44.000 3.32 0.00 40.80 2.59
2032 2173 5.221541 GGTGCCTAAGCTGTCAGATAATAGT 60.222 44.000 3.32 0.00 40.80 2.12
2033 2174 5.221521 TGGTGCCTAAGCTGTCAGATAATAG 60.222 44.000 3.32 0.00 40.80 1.73
2034 2175 4.653801 TGGTGCCTAAGCTGTCAGATAATA 59.346 41.667 3.32 0.00 40.80 0.98
2035 2176 3.455910 TGGTGCCTAAGCTGTCAGATAAT 59.544 43.478 3.32 0.00 40.80 1.28
2036 2177 2.837591 TGGTGCCTAAGCTGTCAGATAA 59.162 45.455 3.32 0.00 40.80 1.75
2054 2206 4.040952 ACACACTAGATGCTCTTTTCTGGT 59.959 41.667 0.00 0.00 34.43 4.00
2055 2207 4.573900 ACACACTAGATGCTCTTTTCTGG 58.426 43.478 0.00 0.00 0.00 3.86
2144 2296 4.409570 CAAGATCAGCCTTGACAATTTCG 58.590 43.478 0.00 0.00 44.66 3.46
2273 2425 3.791545 TGGGCCTCCTCAGGTTATTTATT 59.208 43.478 4.53 0.00 42.74 1.40
2286 2438 1.719063 TTGCTGTTTCTGGGCCTCCT 61.719 55.000 4.53 0.00 0.00 3.69
2287 2439 0.827507 TTTGCTGTTTCTGGGCCTCC 60.828 55.000 4.53 0.00 0.00 4.30
2289 2441 1.494960 TTTTTGCTGTTTCTGGGCCT 58.505 45.000 4.53 0.00 0.00 5.19
2290 2442 2.549064 ATTTTTGCTGTTTCTGGGCC 57.451 45.000 0.00 0.00 0.00 5.80
2291 2443 5.122239 GGATAAATTTTTGCTGTTTCTGGGC 59.878 40.000 0.00 0.00 0.00 5.36
2292 2444 5.348451 CGGATAAATTTTTGCTGTTTCTGGG 59.652 40.000 0.00 0.00 0.00 4.45
2294 2446 5.443170 CGCGGATAAATTTTTGCTGTTTCTG 60.443 40.000 0.00 0.00 0.00 3.02
2295 2447 4.621034 CGCGGATAAATTTTTGCTGTTTCT 59.379 37.500 0.00 0.00 0.00 2.52
2296 2448 4.619336 TCGCGGATAAATTTTTGCTGTTTC 59.381 37.500 6.13 0.00 0.00 2.78
2297 2449 4.551388 TCGCGGATAAATTTTTGCTGTTT 58.449 34.783 6.13 0.00 0.00 2.83
2298 2450 4.167554 TCGCGGATAAATTTTTGCTGTT 57.832 36.364 6.13 0.00 0.00 3.16
2299 2451 3.840890 TCGCGGATAAATTTTTGCTGT 57.159 38.095 6.13 0.00 0.00 4.40
2300 2452 4.165779 ACTTCGCGGATAAATTTTTGCTG 58.834 39.130 6.13 0.00 0.00 4.41
2301 2453 4.083003 TGACTTCGCGGATAAATTTTTGCT 60.083 37.500 6.13 0.00 0.00 3.91
2302 2454 4.162812 TGACTTCGCGGATAAATTTTTGC 58.837 39.130 6.13 0.00 0.00 3.68
2303 2455 5.455525 GGATGACTTCGCGGATAAATTTTTG 59.544 40.000 6.13 0.00 0.00 2.44
2304 2456 5.449999 GGGATGACTTCGCGGATAAATTTTT 60.450 40.000 6.13 0.00 0.00 1.94
2305 2457 4.036380 GGGATGACTTCGCGGATAAATTTT 59.964 41.667 6.13 0.00 0.00 1.82
2306 2458 3.564225 GGGATGACTTCGCGGATAAATTT 59.436 43.478 6.13 0.00 0.00 1.82
2307 2459 3.139077 GGGATGACTTCGCGGATAAATT 58.861 45.455 6.13 0.00 0.00 1.82
2308 2460 2.368875 AGGGATGACTTCGCGGATAAAT 59.631 45.455 6.13 0.00 41.96 1.40
2309 2461 1.760613 AGGGATGACTTCGCGGATAAA 59.239 47.619 6.13 0.00 41.96 1.40
2310 2462 1.340248 GAGGGATGACTTCGCGGATAA 59.660 52.381 6.13 0.00 41.96 1.75
2311 2463 0.959553 GAGGGATGACTTCGCGGATA 59.040 55.000 6.13 0.00 41.96 2.59
2312 2464 1.742768 GAGGGATGACTTCGCGGAT 59.257 57.895 6.13 0.00 41.96 4.18
2313 2465 2.423898 GGAGGGATGACTTCGCGGA 61.424 63.158 6.13 0.00 41.96 5.54
2314 2466 2.107141 GGAGGGATGACTTCGCGG 59.893 66.667 6.13 0.00 41.96 6.46
2315 2467 1.066587 GAGGAGGGATGACTTCGCG 59.933 63.158 0.00 0.00 41.96 5.87
2316 2468 0.103937 CAGAGGAGGGATGACTTCGC 59.896 60.000 0.00 0.00 37.56 4.70
2317 2469 0.749649 CCAGAGGAGGGATGACTTCG 59.250 60.000 0.00 0.00 0.00 3.79
2318 2470 0.467804 GCCAGAGGAGGGATGACTTC 59.532 60.000 0.00 0.00 0.00 3.01
2319 2471 1.333636 CGCCAGAGGAGGGATGACTT 61.334 60.000 0.00 0.00 0.00 3.01
2320 2472 1.760086 CGCCAGAGGAGGGATGACT 60.760 63.158 0.00 0.00 0.00 3.41
2321 2473 2.818132 CGCCAGAGGAGGGATGAC 59.182 66.667 0.00 0.00 0.00 3.06
2322 2474 3.157252 GCGCCAGAGGAGGGATGA 61.157 66.667 0.00 0.00 0.00 2.92
2323 2475 3.160047 AGCGCCAGAGGAGGGATG 61.160 66.667 2.29 0.00 0.00 3.51
2570 2723 3.790437 CCTCGTGCAGCCCTCCAT 61.790 66.667 0.00 0.00 0.00 3.41
3264 3417 2.651361 CTCCACCAGACGAGCGTT 59.349 61.111 0.00 0.00 0.00 4.84
3402 3555 2.573340 CAAAACGATGCCCCCAGC 59.427 61.111 0.00 0.00 44.14 4.85
3941 4107 6.765989 CAGTACCAATAGCTGCAGGTTATTTA 59.234 38.462 25.47 5.65 35.62 1.40
3947 4113 2.187958 TCAGTACCAATAGCTGCAGGT 58.812 47.619 23.72 23.72 38.14 4.00
3948 4114 2.939103 GTTCAGTACCAATAGCTGCAGG 59.061 50.000 17.12 0.00 0.00 4.85
3949 4115 3.866651 AGTTCAGTACCAATAGCTGCAG 58.133 45.455 10.11 10.11 0.00 4.41
3950 4116 3.981071 AGTTCAGTACCAATAGCTGCA 57.019 42.857 1.02 0.00 0.00 4.41
3951 4117 4.003648 ACAAGTTCAGTACCAATAGCTGC 58.996 43.478 0.00 0.00 0.00 5.25
3952 4118 7.667043 TTAACAAGTTCAGTACCAATAGCTG 57.333 36.000 0.00 0.00 0.00 4.24
3953 4119 8.322091 AGATTAACAAGTTCAGTACCAATAGCT 58.678 33.333 0.00 0.00 0.00 3.32
4065 4234 1.946768 CTCCTTGAACGCCAAAGTCAA 59.053 47.619 0.00 0.00 33.76 3.18
4225 4394 7.128331 CCATAGTGACATCGAAATTGTTGATC 58.872 38.462 0.00 0.00 0.00 2.92
4338 4516 4.097437 TCCATGTGTGTAAGTATCGAGACC 59.903 45.833 6.56 0.00 0.00 3.85
4368 4546 2.223409 CCCATGTGAGATTGCATCAACG 60.223 50.000 0.00 0.00 0.00 4.10
4372 4550 2.353357 TCCCCATGTGAGATTGCATC 57.647 50.000 0.00 0.00 0.00 3.91
4386 4564 0.903942 GCAAAAGATGGCATTCCCCA 59.096 50.000 0.00 0.00 39.65 4.96
4496 4678 2.602878 GCATCAGCATCAAAACCACTG 58.397 47.619 0.00 0.00 41.58 3.66
4541 4723 9.653287 CCACTATCAAACTGAAATTGTAGAGTA 57.347 33.333 0.00 0.00 0.00 2.59
4542 4724 8.157476 ACCACTATCAAACTGAAATTGTAGAGT 58.843 33.333 0.00 0.00 0.00 3.24
4547 4737 6.959639 ACACCACTATCAAACTGAAATTGT 57.040 33.333 0.00 0.00 0.00 2.71
4550 4740 7.581213 TCAAACACCACTATCAAACTGAAAT 57.419 32.000 0.00 0.00 0.00 2.17
4651 4941 0.583438 CGATGACAATGTCCGCATCC 59.417 55.000 11.24 0.00 35.01 3.51
4657 4947 1.135083 ACTCCGACGATGACAATGTCC 60.135 52.381 11.24 0.00 0.00 4.02
4663 4953 1.673337 ACCGACTCCGACGATGACA 60.673 57.895 0.00 0.00 38.22 3.58
4889 5179 5.180117 CAGTCTGGGTGAAAACACAAGATAG 59.820 44.000 0.00 0.00 0.00 2.08
5063 5353 1.201414 GTTTGTGAATGGGGCCTAACG 59.799 52.381 0.84 0.00 0.00 3.18
5091 5381 7.492344 ACTGGAAAACAAACAGTTGAATGAATC 59.508 33.333 0.00 0.00 42.38 2.52
5122 5414 4.613622 GCTTGTGTTACATGTCATGTGGAC 60.614 45.833 25.63 22.08 44.60 4.02
5500 5810 9.304731 ACAAAATTTACACGCGTAGAATAGATA 57.695 29.630 13.44 0.00 0.00 1.98
5501 5811 8.114290 CACAAAATTTACACGCGTAGAATAGAT 58.886 33.333 13.44 0.30 0.00 1.98
5502 5812 7.116662 ACACAAAATTTACACGCGTAGAATAGA 59.883 33.333 13.44 0.00 0.00 1.98
5503 5813 7.231607 ACACAAAATTTACACGCGTAGAATAG 58.768 34.615 13.44 0.00 0.00 1.73
5504 5814 7.119605 ACACAAAATTTACACGCGTAGAATA 57.880 32.000 13.44 0.00 0.00 1.75
5505 5815 5.992729 ACACAAAATTTACACGCGTAGAAT 58.007 33.333 13.44 9.77 0.00 2.40
5506 5816 5.406767 ACACAAAATTTACACGCGTAGAA 57.593 34.783 13.44 6.10 0.00 2.10
5507 5817 5.406767 AACACAAAATTTACACGCGTAGA 57.593 34.783 13.44 0.00 0.00 2.59
5508 5818 5.452944 ACAAACACAAAATTTACACGCGTAG 59.547 36.000 13.44 9.47 0.00 3.51
5509 5819 5.330295 ACAAACACAAAATTTACACGCGTA 58.670 33.333 13.44 0.00 0.00 4.42
5564 5905 7.258022 TGAAAAATCGAATCACACTTCTGAA 57.742 32.000 0.00 0.00 0.00 3.02
5629 5972 7.657761 ACCAGAGATGCTACTAAATTTATTCGG 59.342 37.037 0.00 0.00 0.00 4.30
5678 6025 6.090483 TGCCAACTAGAAGCAGAGATATAC 57.910 41.667 0.00 0.00 31.65 1.47
5722 6546 2.290641 CAGTTCCCTTTGGTCTTGTTCG 59.709 50.000 0.00 0.00 0.00 3.95
5823 6649 1.067582 CAGCCTACGAACCGGGATC 59.932 63.158 6.32 2.37 0.00 3.36
5824 6650 0.974010 TTCAGCCTACGAACCGGGAT 60.974 55.000 6.32 0.00 0.00 3.85
5825 6651 1.607178 TTCAGCCTACGAACCGGGA 60.607 57.895 6.32 0.00 0.00 5.14
5826 6652 1.447314 GTTCAGCCTACGAACCGGG 60.447 63.158 6.32 0.00 37.40 5.73
5829 6655 4.501071 TGATAAAGTTCAGCCTACGAACC 58.499 43.478 0.00 0.00 43.07 3.62
5831 6657 4.630069 GCTTGATAAAGTTCAGCCTACGAA 59.370 41.667 0.00 0.00 0.00 3.85
5832 6658 4.181578 GCTTGATAAAGTTCAGCCTACGA 58.818 43.478 0.00 0.00 0.00 3.43
5868 6696 1.152567 CCCCAAACTTGTCCAGGCA 60.153 57.895 0.00 0.00 0.00 4.75
5904 6732 1.398958 AATTGCGTTGTGTGGGCCTT 61.399 50.000 4.53 0.00 0.00 4.35
6033 6871 8.625651 GGTTGCTTGGTAAATAAAACCATTTTT 58.374 29.630 0.00 0.00 46.16 1.94
6057 6895 1.083517 GGTACTTAGGGGGTGGGGT 59.916 63.158 0.00 0.00 0.00 4.95
6080 6941 3.550842 GCACTTTTCAGGCCTTGTACAAG 60.551 47.826 25.79 25.79 38.14 3.16
6081 6942 2.360801 GCACTTTTCAGGCCTTGTACAA 59.639 45.455 0.00 8.28 0.00 2.41
6082 6943 1.953686 GCACTTTTCAGGCCTTGTACA 59.046 47.619 0.00 0.00 0.00 2.90
6083 6944 1.069227 CGCACTTTTCAGGCCTTGTAC 60.069 52.381 0.00 0.00 0.00 2.90
6084 6945 1.234821 CGCACTTTTCAGGCCTTGTA 58.765 50.000 0.00 0.00 0.00 2.41
6085 6946 1.455383 CCGCACTTTTCAGGCCTTGT 61.455 55.000 0.00 0.00 0.00 3.16
6086 6947 1.172180 TCCGCACTTTTCAGGCCTTG 61.172 55.000 0.00 0.00 0.00 3.61
6087 6948 0.890996 CTCCGCACTTTTCAGGCCTT 60.891 55.000 0.00 0.00 0.00 4.35
6088 6949 1.302832 CTCCGCACTTTTCAGGCCT 60.303 57.895 0.00 0.00 0.00 5.19
6089 6950 0.321298 TACTCCGCACTTTTCAGGCC 60.321 55.000 0.00 0.00 0.00 5.19
6090 6951 1.519408 TTACTCCGCACTTTTCAGGC 58.481 50.000 0.00 0.00 0.00 4.85
6091 6952 4.475944 CATTTTACTCCGCACTTTTCAGG 58.524 43.478 0.00 0.00 0.00 3.86
6092 6953 4.023193 ACCATTTTACTCCGCACTTTTCAG 60.023 41.667 0.00 0.00 0.00 3.02
6093 6954 3.886505 ACCATTTTACTCCGCACTTTTCA 59.113 39.130 0.00 0.00 0.00 2.69
6094 6955 4.023536 TCACCATTTTACTCCGCACTTTTC 60.024 41.667 0.00 0.00 0.00 2.29
6095 6956 3.886505 TCACCATTTTACTCCGCACTTTT 59.113 39.130 0.00 0.00 0.00 2.27
6096 6957 3.482436 TCACCATTTTACTCCGCACTTT 58.518 40.909 0.00 0.00 0.00 2.66
6097 6958 3.134574 TCACCATTTTACTCCGCACTT 57.865 42.857 0.00 0.00 0.00 3.16
6098 6959 2.851263 TCACCATTTTACTCCGCACT 57.149 45.000 0.00 0.00 0.00 4.40
6112 6973 0.756294 TGAAGCGAGGAGTTTCACCA 59.244 50.000 0.00 0.00 43.57 4.17
6131 6992 4.651045 ACAAGCTGGAAAGGAAGAAAACAT 59.349 37.500 0.00 0.00 0.00 2.71
6135 6996 3.181476 GCAACAAGCTGGAAAGGAAGAAA 60.181 43.478 0.00 0.00 41.15 2.52
6161 7023 1.678728 CCGCAACAAGAGCCCAGATTA 60.679 52.381 0.00 0.00 0.00 1.75
6206 7068 6.717084 GGGCCTCATTCTAGCAGTTTTTATAT 59.283 38.462 0.84 0.00 0.00 0.86
6243 7105 4.148838 AGCAGTAGGAGTAGCATTAGGAG 58.851 47.826 0.00 0.00 0.00 3.69
6388 7250 0.391793 TTCGTCAACAGTGTGTGCCA 60.392 50.000 0.00 0.00 0.00 4.92
6400 7262 4.191544 GGGACATCAATCTCATTCGTCAA 58.808 43.478 0.00 0.00 0.00 3.18
6425 7287 1.557371 GGATATAGCTCCTCCCAAGGC 59.443 57.143 0.00 0.00 43.02 4.35
6467 9331 1.446272 GAGACCAAAGAGCCGACCG 60.446 63.158 0.00 0.00 0.00 4.79
6469 9333 0.603569 TCTGAGACCAAAGAGCCGAC 59.396 55.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.