Multiple sequence alignment - TraesCS7A01G277200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G277200 chr7A 100.000 1943 0 0 2140 4082 290916925 290918867 0.000000e+00 3589.0
1 TraesCS7A01G277200 chr7A 100.000 1877 0 0 1 1877 290914786 290916662 0.000000e+00 3467.0
2 TraesCS7A01G277200 chr7A 96.703 182 6 0 1 182 294602979 294603160 1.840000e-78 303.0
3 TraesCS7A01G277200 chr7A 94.737 190 10 0 1 190 335213074 335212885 3.090000e-76 296.0
4 TraesCS7A01G277200 chr7A 96.581 117 4 0 2203 2319 290916930 290917046 1.160000e-45 195.0
5 TraesCS7A01G277200 chr7A 96.581 117 4 0 2145 2261 290916988 290917104 1.160000e-45 195.0
6 TraesCS7A01G277200 chr7A 95.556 45 2 0 564 608 637957563 637957607 5.660000e-09 73.1
7 TraesCS7A01G277200 chr7B 92.316 976 34 15 928 1877 246001825 246002785 0.000000e+00 1349.0
8 TraesCS7A01G277200 chr7B 88.634 1047 53 22 3082 4082 246003931 246004957 0.000000e+00 1214.0
9 TraesCS7A01G277200 chr7B 88.717 647 40 11 2368 2993 246002957 246003591 0.000000e+00 760.0
10 TraesCS7A01G277200 chr7B 91.139 79 5 1 2267 2345 246002797 246002873 5.580000e-19 106.0
11 TraesCS7A01G277200 chr7B 89.831 59 6 0 2145 2203 246002791 246002849 4.380000e-10 76.8
12 TraesCS7A01G277200 chr7D 93.122 916 23 19 963 1838 265695872 265696787 0.000000e+00 1306.0
13 TraesCS7A01G277200 chr7D 90.093 646 37 9 2368 2993 265697932 265698570 0.000000e+00 813.0
14 TraesCS7A01G277200 chr7D 95.067 446 13 4 3645 4082 265699451 265699895 0.000000e+00 693.0
15 TraesCS7A01G277200 chr7D 89.073 302 18 5 3267 3563 265698948 265699239 1.080000e-95 361.0
16 TraesCS7A01G277200 chr7D 90.000 90 9 0 3050 3139 265698733 265698822 2.580000e-22 117.0
17 TraesCS7A01G277200 chr7D 87.778 90 4 5 2282 2371 265697784 265697866 9.340000e-17 99.0
18 TraesCS7A01G277200 chr7D 89.655 58 6 0 2991 3048 265698731 265698788 1.570000e-09 75.0
19 TraesCS7A01G277200 chrUn 95.154 454 21 1 180 632 12165558 12166011 0.000000e+00 715.0
20 TraesCS7A01G277200 chrUn 95.154 454 21 1 180 632 349403601 349403148 0.000000e+00 715.0
21 TraesCS7A01G277200 chrUn 94.714 454 23 1 180 632 323311406 323311859 0.000000e+00 704.0
22 TraesCS7A01G277200 chrUn 90.763 249 23 0 634 882 12166099 12166347 2.350000e-87 333.0
23 TraesCS7A01G277200 chrUn 90.763 249 23 0 634 882 349403060 349402812 2.350000e-87 333.0
24 TraesCS7A01G277200 chr5B 94.956 456 22 1 180 634 410828214 410827759 0.000000e+00 713.0
25 TraesCS7A01G277200 chr5B 90.612 245 22 1 634 878 410827673 410827430 1.420000e-84 324.0
26 TraesCS7A01G277200 chr6A 94.737 456 23 1 180 634 27523371 27522916 0.000000e+00 708.0
27 TraesCS7A01G277200 chr6A 96.685 181 6 0 1 181 109228129 109228309 6.630000e-78 302.0
28 TraesCS7A01G277200 chr6A 94.764 191 8 2 1 189 548347727 548347537 3.090000e-76 296.0
29 TraesCS7A01G277200 chr5A 96.685 181 6 0 1 181 384841908 384841728 6.630000e-78 302.0
30 TraesCS7A01G277200 chr5A 78.167 371 80 1 239 608 626125224 626125594 6.820000e-58 235.0
31 TraesCS7A01G277200 chr4A 96.685 181 6 0 1 181 48562559 48562739 6.630000e-78 302.0
32 TraesCS7A01G277200 chr2A 96.685 181 6 0 1 181 158864603 158864423 6.630000e-78 302.0
33 TraesCS7A01G277200 chr2A 77.525 396 86 3 239 632 80910551 80910157 6.820000e-58 235.0
34 TraesCS7A01G277200 chr1A 96.685 181 6 0 1 181 363218262 363218442 6.630000e-78 302.0
35 TraesCS7A01G277200 chr1A 94.301 193 10 1 1 192 341085615 341085807 1.110000e-75 294.0
36 TraesCS7A01G277200 chr1B 78.167 371 80 1 239 608 512155852 512156222 6.820000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G277200 chr7A 290914786 290918867 4081 False 1861.500000 3589 98.2905 1 4082 4 chr7A.!!$F3 4081
1 TraesCS7A01G277200 chr7B 246001825 246004957 3132 False 701.160000 1349 90.1274 928 4082 5 chr7B.!!$F1 3154
2 TraesCS7A01G277200 chr7D 265695872 265699895 4023 False 494.857143 1306 90.6840 963 4082 7 chr7D.!!$F1 3119
3 TraesCS7A01G277200 chrUn 12165558 12166347 789 False 524.000000 715 92.9585 180 882 2 chrUn.!!$F2 702
4 TraesCS7A01G277200 chrUn 349402812 349403601 789 True 524.000000 715 92.9585 180 882 2 chrUn.!!$R1 702
5 TraesCS7A01G277200 chr5B 410827430 410828214 784 True 518.500000 713 92.7840 180 878 2 chr5B.!!$R1 698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.036952 AATGACACCGGAGCACAGAG 60.037 55.0 9.46 0.0 0.00 3.35 F
157 158 0.102120 CCGGAGCACAGAGATCAGAC 59.898 60.0 0.00 0.0 33.23 3.51 F
898 986 0.103572 TATTCCGCCGCCAACTACTC 59.896 55.0 0.00 0.0 0.00 2.59 F
903 991 0.108992 CGCCGCCAACTACTCAGTAA 60.109 55.0 0.00 0.0 33.48 2.24 F
1444 1558 0.315568 GGCGGCTACCTAGATCTGTG 59.684 60.0 5.18 0.0 0.00 3.66 F
2779 3853 0.529337 CAGCTCACCACTAGCATCCG 60.529 60.0 0.00 0.0 42.62 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1166 1279 0.528470 CGCCTCTTCTTCTTCTCCGT 59.472 55.0 0.00 0.0 0.00 4.69 R
2141 2271 0.833287 GCAGGAAGCTACCAGGATCA 59.167 55.0 0.00 0.0 41.15 2.92 R
2668 3742 0.175760 TGTAGATCCTGTTCCTGCGC 59.824 55.0 0.00 0.0 0.00 6.09 R
2785 3879 1.042229 TGGAAGCACTTGCAGCAAAT 58.958 45.0 9.65 0.0 45.16 2.32 R
3014 4110 0.111089 CGTGTTGCTCTTTCTCACGC 60.111 55.0 0.00 0.0 43.39 5.34 R
3858 5459 0.238553 TGAAGCTCACGTCTGACTCG 59.761 55.0 6.21 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 9.463443 TGAGATACTCGATGTAATAAATGTGTG 57.537 33.333 0.00 0.00 34.45 3.82
72 73 9.678941 GAGATACTCGATGTAATAAATGTGTGA 57.321 33.333 0.00 0.00 34.45 3.58
76 77 7.409697 ACTCGATGTAATAAATGTGTGATTGC 58.590 34.615 0.00 0.00 0.00 3.56
77 78 7.280876 ACTCGATGTAATAAATGTGTGATTGCT 59.719 33.333 0.00 0.00 0.00 3.91
78 79 8.655651 TCGATGTAATAAATGTGTGATTGCTA 57.344 30.769 0.00 0.00 0.00 3.49
79 80 8.547894 TCGATGTAATAAATGTGTGATTGCTAC 58.452 33.333 0.00 0.00 0.00 3.58
80 81 8.551205 CGATGTAATAAATGTGTGATTGCTACT 58.449 33.333 0.00 0.00 0.00 2.57
81 82 9.869844 GATGTAATAAATGTGTGATTGCTACTC 57.130 33.333 0.00 0.00 0.00 2.59
82 83 9.618890 ATGTAATAAATGTGTGATTGCTACTCT 57.381 29.630 0.00 0.00 0.00 3.24
83 84 8.882736 TGTAATAAATGTGTGATTGCTACTCTG 58.117 33.333 0.00 0.00 0.00 3.35
84 85 7.928307 AATAAATGTGTGATTGCTACTCTGT 57.072 32.000 0.00 0.00 0.00 3.41
85 86 7.928307 ATAAATGTGTGATTGCTACTCTGTT 57.072 32.000 0.00 0.00 0.00 3.16
86 87 9.448438 AATAAATGTGTGATTGCTACTCTGTTA 57.552 29.630 0.00 0.00 0.00 2.41
87 88 7.928307 AAATGTGTGATTGCTACTCTGTTAT 57.072 32.000 0.00 0.00 0.00 1.89
89 90 9.448438 AAATGTGTGATTGCTACTCTGTTATAA 57.552 29.630 0.00 0.00 0.00 0.98
90 91 9.448438 AATGTGTGATTGCTACTCTGTTATAAA 57.552 29.630 0.00 0.00 0.00 1.40
91 92 9.618890 ATGTGTGATTGCTACTCTGTTATAAAT 57.381 29.630 0.00 0.00 0.00 1.40
92 93 9.098355 TGTGTGATTGCTACTCTGTTATAAATC 57.902 33.333 0.00 0.00 0.00 2.17
93 94 8.552034 GTGTGATTGCTACTCTGTTATAAATCC 58.448 37.037 0.00 0.00 0.00 3.01
94 95 8.486210 TGTGATTGCTACTCTGTTATAAATCCT 58.514 33.333 0.00 0.00 0.00 3.24
95 96 8.983724 GTGATTGCTACTCTGTTATAAATCCTC 58.016 37.037 0.00 0.00 0.00 3.71
96 97 8.150945 TGATTGCTACTCTGTTATAAATCCTCC 58.849 37.037 0.00 0.00 0.00 4.30
97 98 6.085555 TGCTACTCTGTTATAAATCCTCCG 57.914 41.667 0.00 0.00 0.00 4.63
98 99 5.831525 TGCTACTCTGTTATAAATCCTCCGA 59.168 40.000 0.00 0.00 0.00 4.55
99 100 6.016192 TGCTACTCTGTTATAAATCCTCCGAG 60.016 42.308 0.00 0.00 0.00 4.63
100 101 6.016108 GCTACTCTGTTATAAATCCTCCGAGT 60.016 42.308 0.00 0.00 34.11 4.18
101 102 7.174599 GCTACTCTGTTATAAATCCTCCGAGTA 59.825 40.741 0.00 0.00 32.22 2.59
102 103 7.274603 ACTCTGTTATAAATCCTCCGAGTAC 57.725 40.000 0.00 0.00 0.00 2.73
103 104 7.061688 ACTCTGTTATAAATCCTCCGAGTACT 58.938 38.462 0.00 0.00 0.00 2.73
104 105 7.013464 ACTCTGTTATAAATCCTCCGAGTACTG 59.987 40.741 0.00 0.00 0.00 2.74
105 106 6.832384 TCTGTTATAAATCCTCCGAGTACTGT 59.168 38.462 0.00 0.00 0.00 3.55
106 107 6.802608 TGTTATAAATCCTCCGAGTACTGTG 58.197 40.000 0.00 0.00 0.00 3.66
107 108 6.379133 TGTTATAAATCCTCCGAGTACTGTGT 59.621 38.462 0.00 0.00 0.00 3.72
108 109 3.594603 AAATCCTCCGAGTACTGTGTG 57.405 47.619 0.00 0.00 0.00 3.82
109 110 1.475403 ATCCTCCGAGTACTGTGTGG 58.525 55.000 0.00 1.44 0.00 4.17
110 111 0.111832 TCCTCCGAGTACTGTGTGGT 59.888 55.000 0.00 0.00 0.00 4.16
111 112 0.243907 CCTCCGAGTACTGTGTGGTG 59.756 60.000 0.00 0.00 0.00 4.17
112 113 0.959553 CTCCGAGTACTGTGTGGTGT 59.040 55.000 0.00 0.00 0.00 4.16
113 114 0.956633 TCCGAGTACTGTGTGGTGTC 59.043 55.000 0.00 0.00 0.00 3.67
114 115 0.671796 CCGAGTACTGTGTGGTGTCA 59.328 55.000 0.00 0.00 0.00 3.58
115 116 1.335964 CCGAGTACTGTGTGGTGTCAG 60.336 57.143 0.00 0.00 37.65 3.51
116 117 1.784525 GAGTACTGTGTGGTGTCAGC 58.215 55.000 0.00 0.00 35.37 4.26
117 118 1.068588 GAGTACTGTGTGGTGTCAGCA 59.931 52.381 0.00 0.00 35.37 4.41
118 119 1.694150 AGTACTGTGTGGTGTCAGCAT 59.306 47.619 8.18 0.00 35.37 3.79
119 120 2.104792 AGTACTGTGTGGTGTCAGCATT 59.895 45.455 8.18 0.00 35.37 3.56
120 121 2.928801 ACTGTGTGGTGTCAGCATTA 57.071 45.000 8.18 0.00 35.37 1.90
121 122 2.494059 ACTGTGTGGTGTCAGCATTAC 58.506 47.619 8.18 10.98 35.37 1.89
122 123 2.104792 ACTGTGTGGTGTCAGCATTACT 59.895 45.455 8.18 0.00 35.37 2.24
139 140 4.487714 TTACTGATCCAGGAATGACACC 57.512 45.455 0.00 0.00 35.51 4.16
140 141 1.208052 ACTGATCCAGGAATGACACCG 59.792 52.381 0.00 0.00 35.51 4.94
141 142 0.541392 TGATCCAGGAATGACACCGG 59.459 55.000 0.00 0.00 0.00 5.28
142 143 0.830648 GATCCAGGAATGACACCGGA 59.169 55.000 9.46 0.00 35.74 5.14
143 144 0.833287 ATCCAGGAATGACACCGGAG 59.167 55.000 9.46 1.26 35.16 4.63
144 145 1.450312 CCAGGAATGACACCGGAGC 60.450 63.158 9.46 0.00 0.00 4.70
145 146 1.296392 CAGGAATGACACCGGAGCA 59.704 57.895 9.46 3.05 0.00 4.26
146 147 1.021390 CAGGAATGACACCGGAGCAC 61.021 60.000 9.46 0.00 0.00 4.40
147 148 1.003839 GGAATGACACCGGAGCACA 60.004 57.895 9.46 4.98 0.00 4.57
148 149 1.021390 GGAATGACACCGGAGCACAG 61.021 60.000 9.46 0.00 0.00 3.66
149 150 0.037326 GAATGACACCGGAGCACAGA 60.037 55.000 9.46 0.00 0.00 3.41
150 151 0.036952 AATGACACCGGAGCACAGAG 60.037 55.000 9.46 0.00 0.00 3.35
151 152 0.900182 ATGACACCGGAGCACAGAGA 60.900 55.000 9.46 0.00 0.00 3.10
152 153 0.900182 TGACACCGGAGCACAGAGAT 60.900 55.000 9.46 0.00 0.00 2.75
153 154 0.179124 GACACCGGAGCACAGAGATC 60.179 60.000 9.46 0.00 0.00 2.75
154 155 0.900182 ACACCGGAGCACAGAGATCA 60.900 55.000 9.46 0.00 33.23 2.92
155 156 0.179116 CACCGGAGCACAGAGATCAG 60.179 60.000 9.46 0.00 33.23 2.90
156 157 0.323816 ACCGGAGCACAGAGATCAGA 60.324 55.000 9.46 0.00 33.23 3.27
157 158 0.102120 CCGGAGCACAGAGATCAGAC 59.898 60.000 0.00 0.00 33.23 3.51
158 159 0.102120 CGGAGCACAGAGATCAGACC 59.898 60.000 0.00 0.00 33.23 3.85
159 160 0.102120 GGAGCACAGAGATCAGACCG 59.898 60.000 0.00 0.00 33.23 4.79
160 161 0.814457 GAGCACAGAGATCAGACCGT 59.186 55.000 0.00 0.00 31.47 4.83
161 162 1.203523 GAGCACAGAGATCAGACCGTT 59.796 52.381 0.00 0.00 31.47 4.44
162 163 1.620819 AGCACAGAGATCAGACCGTTT 59.379 47.619 0.00 0.00 0.00 3.60
163 164 2.826128 AGCACAGAGATCAGACCGTTTA 59.174 45.455 0.00 0.00 0.00 2.01
164 165 3.258372 AGCACAGAGATCAGACCGTTTAA 59.742 43.478 0.00 0.00 0.00 1.52
165 166 3.614616 GCACAGAGATCAGACCGTTTAAG 59.385 47.826 0.00 0.00 0.00 1.85
166 167 4.618460 GCACAGAGATCAGACCGTTTAAGA 60.618 45.833 0.00 0.00 0.00 2.10
167 168 5.655488 CACAGAGATCAGACCGTTTAAGAT 58.345 41.667 0.00 0.00 0.00 2.40
168 169 5.746245 CACAGAGATCAGACCGTTTAAGATC 59.254 44.000 0.00 0.00 36.29 2.75
169 170 5.654650 ACAGAGATCAGACCGTTTAAGATCT 59.345 40.000 0.00 0.00 45.78 2.75
170 171 5.976534 CAGAGATCAGACCGTTTAAGATCTG 59.023 44.000 7.86 4.19 43.84 2.90
171 172 5.068460 AGAGATCAGACCGTTTAAGATCTGG 59.932 44.000 7.86 0.00 43.84 3.86
172 173 4.712337 AGATCAGACCGTTTAAGATCTGGT 59.288 41.667 0.00 0.00 42.63 4.00
173 174 5.163499 AGATCAGACCGTTTAAGATCTGGTC 60.163 44.000 17.48 17.48 45.71 4.02
175 176 1.925185 GACCGTTTAAGATCTGGTCGC 59.075 52.381 12.08 0.00 39.67 5.19
176 177 1.549170 ACCGTTTAAGATCTGGTCGCT 59.451 47.619 0.00 0.00 0.00 4.93
177 178 2.756760 ACCGTTTAAGATCTGGTCGCTA 59.243 45.455 0.00 0.00 0.00 4.26
178 179 3.114065 CCGTTTAAGATCTGGTCGCTAC 58.886 50.000 0.00 0.00 0.00 3.58
191 192 0.607217 TCGCTACAGTGTTCCTCCGA 60.607 55.000 0.00 0.28 0.00 4.55
193 194 1.336517 CGCTACAGTGTTCCTCCGAAA 60.337 52.381 0.00 0.00 0.00 3.46
213 214 8.708742 TCCGAAAATAGCACTTCATTATAATCG 58.291 33.333 0.00 0.00 0.00 3.34
222 223 4.152402 ACTTCATTATAATCGCCGATGCAC 59.848 41.667 0.00 0.00 37.32 4.57
225 226 2.517650 TATAATCGCCGATGCACACA 57.482 45.000 0.00 0.00 37.32 3.72
226 227 1.882912 ATAATCGCCGATGCACACAT 58.117 45.000 0.00 0.00 39.98 3.21
502 504 2.494870 GGTTTCTAGCCCGTAACTCTCA 59.505 50.000 0.00 0.00 0.00 3.27
522 524 6.233434 TCTCATACTTGTGTTTCTTGCAGAT 58.767 36.000 0.00 0.00 0.00 2.90
524 526 7.331934 TCTCATACTTGTGTTTCTTGCAGATAC 59.668 37.037 0.00 0.00 0.00 2.24
567 569 1.608283 GCACTAACGTGGGAAGCTCTT 60.608 52.381 0.00 0.00 41.51 2.85
577 579 0.319641 GGAAGCTCTTGAACCGTCGT 60.320 55.000 0.00 0.00 0.00 4.34
610 612 1.352156 CCGCGACAGTTCCAGCTAAC 61.352 60.000 8.23 0.00 0.00 2.34
620 622 7.050970 ACAGTTCCAGCTAACGATATTCATA 57.949 36.000 0.00 0.00 34.46 2.15
652 740 4.002511 GCGAACTCGTAGCAAAGGCTTT 62.003 50.000 6.68 6.68 44.86 3.51
668 756 4.137543 AGGCTTTCAAGTCGAAACAGAAT 58.862 39.130 0.00 0.00 38.72 2.40
670 758 4.144555 GCTTTCAAGTCGAAACAGAATCG 58.855 43.478 0.00 0.00 38.72 3.34
683 771 4.021102 ACAGAATCGGAAAACCAGATGT 57.979 40.909 0.00 0.00 0.00 3.06
705 793 5.012046 TGTGATCTGACACCAACATCTACTT 59.988 40.000 0.00 0.00 39.69 2.24
822 910 6.492772 CCCCATACTAGTAGGTAAAACTCGAT 59.507 42.308 13.17 0.00 0.00 3.59
832 920 0.320374 AAAACTCGATGACGGCAGGA 59.680 50.000 0.00 0.00 40.21 3.86
890 978 2.030113 GGTACCTATTCCGCCGCC 59.970 66.667 4.06 0.00 0.00 6.13
891 979 2.799452 GGTACCTATTCCGCCGCCA 61.799 63.158 4.06 0.00 0.00 5.69
892 980 1.144496 GTACCTATTCCGCCGCCAA 59.856 57.895 0.00 0.00 0.00 4.52
893 981 1.144496 TACCTATTCCGCCGCCAAC 59.856 57.895 0.00 0.00 0.00 3.77
894 982 1.332144 TACCTATTCCGCCGCCAACT 61.332 55.000 0.00 0.00 0.00 3.16
895 983 1.332144 ACCTATTCCGCCGCCAACTA 61.332 55.000 0.00 0.00 0.00 2.24
896 984 0.878961 CCTATTCCGCCGCCAACTAC 60.879 60.000 0.00 0.00 0.00 2.73
897 985 0.104304 CTATTCCGCCGCCAACTACT 59.896 55.000 0.00 0.00 0.00 2.57
898 986 0.103572 TATTCCGCCGCCAACTACTC 59.896 55.000 0.00 0.00 0.00 2.59
899 987 1.895020 ATTCCGCCGCCAACTACTCA 61.895 55.000 0.00 0.00 0.00 3.41
900 988 2.501223 TTCCGCCGCCAACTACTCAG 62.501 60.000 0.00 0.00 0.00 3.35
901 989 2.261671 CGCCGCCAACTACTCAGT 59.738 61.111 0.00 0.00 36.19 3.41
902 990 1.509463 CGCCGCCAACTACTCAGTA 59.491 57.895 0.00 0.00 33.48 2.74
903 991 0.108992 CGCCGCCAACTACTCAGTAA 60.109 55.000 0.00 0.00 33.48 2.24
904 992 1.470979 CGCCGCCAACTACTCAGTAAT 60.471 52.381 0.00 0.00 33.48 1.89
905 993 2.202566 GCCGCCAACTACTCAGTAATC 58.797 52.381 0.00 0.00 33.48 1.75
906 994 2.460918 CCGCCAACTACTCAGTAATCG 58.539 52.381 0.00 0.00 33.48 3.34
907 995 1.852895 CGCCAACTACTCAGTAATCGC 59.147 52.381 0.00 0.00 33.48 4.58
908 996 2.479730 CGCCAACTACTCAGTAATCGCT 60.480 50.000 0.00 0.00 33.48 4.93
909 997 3.522553 GCCAACTACTCAGTAATCGCTT 58.477 45.455 0.00 0.00 33.48 4.68
910 998 3.307242 GCCAACTACTCAGTAATCGCTTG 59.693 47.826 0.00 0.00 33.48 4.01
911 999 3.307242 CCAACTACTCAGTAATCGCTTGC 59.693 47.826 0.00 0.00 33.48 4.01
912 1000 4.177026 CAACTACTCAGTAATCGCTTGCT 58.823 43.478 0.00 0.00 33.48 3.91
913 1001 4.457834 ACTACTCAGTAATCGCTTGCTT 57.542 40.909 0.00 0.00 31.45 3.91
914 1002 4.822026 ACTACTCAGTAATCGCTTGCTTT 58.178 39.130 0.00 0.00 31.45 3.51
915 1003 5.238583 ACTACTCAGTAATCGCTTGCTTTT 58.761 37.500 0.00 0.00 31.45 2.27
916 1004 5.701290 ACTACTCAGTAATCGCTTGCTTTTT 59.299 36.000 0.00 0.00 31.45 1.94
917 1005 6.872020 ACTACTCAGTAATCGCTTGCTTTTTA 59.128 34.615 0.00 0.00 31.45 1.52
918 1006 6.743575 ACTCAGTAATCGCTTGCTTTTTAT 57.256 33.333 0.00 0.00 0.00 1.40
919 1007 6.546395 ACTCAGTAATCGCTTGCTTTTTATG 58.454 36.000 0.00 0.00 0.00 1.90
920 1008 5.331902 TCAGTAATCGCTTGCTTTTTATGC 58.668 37.500 0.00 0.00 0.00 3.14
921 1009 4.202959 CAGTAATCGCTTGCTTTTTATGCG 59.797 41.667 0.00 0.00 46.71 4.73
930 1018 5.453587 GCTTGCTTTTTATGCGAGTTATGAG 59.546 40.000 0.00 0.00 42.34 2.90
933 1021 4.574828 GCTTTTTATGCGAGTTATGAGGGA 59.425 41.667 0.00 0.00 0.00 4.20
937 1025 3.845781 ATGCGAGTTATGAGGGAATGT 57.154 42.857 0.00 0.00 0.00 2.71
938 1026 3.627395 TGCGAGTTATGAGGGAATGTT 57.373 42.857 0.00 0.00 0.00 2.71
1068 1164 1.073763 CCAACATTGTCTGGTGAGGGA 59.926 52.381 8.84 0.00 46.14 4.20
1166 1279 4.373116 GGCTGCCAAGGTCGACGA 62.373 66.667 15.17 0.00 0.00 4.20
1444 1558 0.315568 GGCGGCTACCTAGATCTGTG 59.684 60.000 5.18 0.00 0.00 3.66
1540 1654 8.454894 GCAGTATCGATATACAGAGAGAAATCA 58.545 37.037 8.66 0.00 40.49 2.57
1595 1709 5.200454 GTTCATGTCGATATTGTCATGTGC 58.800 41.667 22.00 15.14 38.78 4.57
1597 1711 5.841810 TCATGTCGATATTGTCATGTGCTA 58.158 37.500 22.00 7.34 38.78 3.49
1743 1857 4.994852 TGACAAATTAGGTCGGAGTTCTTG 59.005 41.667 5.90 0.00 38.10 3.02
1779 1893 2.679355 GCGTGTTGCAGTCAATGTAA 57.321 45.000 0.00 0.00 45.45 2.41
1847 1977 3.374988 CGCTGAAATTGTGGCTCAGATAA 59.625 43.478 8.03 0.00 39.15 1.75
1855 1985 4.471904 TGTGGCTCAGATAACCAACTAG 57.528 45.455 0.00 0.00 34.63 2.57
2182 2312 5.045213 TGCTTCTGGTGATGGGATAAACTAA 60.045 40.000 0.00 0.00 0.00 2.24
2183 2313 5.885912 GCTTCTGGTGATGGGATAAACTAAA 59.114 40.000 0.00 0.00 0.00 1.85
2184 2314 6.183360 GCTTCTGGTGATGGGATAAACTAAAC 60.183 42.308 0.00 0.00 0.00 2.01
2185 2315 6.381498 TCTGGTGATGGGATAAACTAAACA 57.619 37.500 0.00 0.00 0.00 2.83
2186 2316 6.414732 TCTGGTGATGGGATAAACTAAACAG 58.585 40.000 0.00 0.00 0.00 3.16
2188 2318 6.785076 TGGTGATGGGATAAACTAAACAGAA 58.215 36.000 0.00 0.00 0.00 3.02
2189 2319 6.657541 TGGTGATGGGATAAACTAAACAGAAC 59.342 38.462 0.00 0.00 0.00 3.01
2191 2321 7.175990 GGTGATGGGATAAACTAAACAGAACAA 59.824 37.037 0.00 0.00 0.00 2.83
2192 2322 8.739972 GTGATGGGATAAACTAAACAGAACAAT 58.260 33.333 0.00 0.00 0.00 2.71
2193 2323 9.308000 TGATGGGATAAACTAAACAGAACAATT 57.692 29.630 0.00 0.00 0.00 2.32
2194 2324 9.573133 GATGGGATAAACTAAACAGAACAATTG 57.427 33.333 3.24 3.24 0.00 2.32
2195 2325 7.375053 TGGGATAAACTAAACAGAACAATTGC 58.625 34.615 5.05 0.00 0.00 3.56
2196 2326 7.232534 TGGGATAAACTAAACAGAACAATTGCT 59.767 33.333 5.05 0.00 0.00 3.91
2197 2327 7.542130 GGGATAAACTAAACAGAACAATTGCTG 59.458 37.037 5.05 8.38 38.10 4.41
2199 2329 9.846248 GATAAACTAAACAGAACAATTGCTGAT 57.154 29.630 16.95 5.33 36.07 2.90
2201 2331 8.579682 AAACTAAACAGAACAATTGCTGATTC 57.420 30.769 16.95 8.74 36.07 2.52
2202 2332 7.516198 ACTAAACAGAACAATTGCTGATTCT 57.484 32.000 16.95 10.62 36.07 2.40
2204 2334 5.382618 AACAGAACAATTGCTGATTCTCC 57.617 39.130 16.95 0.00 36.07 3.71
2205 2335 4.660168 ACAGAACAATTGCTGATTCTCCT 58.340 39.130 16.95 0.62 36.07 3.69
2206 2336 4.458295 ACAGAACAATTGCTGATTCTCCTG 59.542 41.667 16.95 5.33 36.07 3.86
2207 2337 4.015084 AGAACAATTGCTGATTCTCCTGG 58.985 43.478 5.05 0.00 0.00 4.45
2208 2338 3.446442 ACAATTGCTGATTCTCCTGGT 57.554 42.857 5.05 0.00 0.00 4.00
2209 2339 4.574674 ACAATTGCTGATTCTCCTGGTA 57.425 40.909 5.05 0.00 0.00 3.25
2210 2340 4.521146 ACAATTGCTGATTCTCCTGGTAG 58.479 43.478 5.05 0.00 0.00 3.18
2211 2341 2.698855 TTGCTGATTCTCCTGGTAGC 57.301 50.000 0.00 0.00 0.00 3.58
2212 2342 1.871418 TGCTGATTCTCCTGGTAGCT 58.129 50.000 0.00 0.00 32.66 3.32
2213 2343 2.191400 TGCTGATTCTCCTGGTAGCTT 58.809 47.619 0.00 0.00 32.66 3.74
2214 2344 2.169352 TGCTGATTCTCCTGGTAGCTTC 59.831 50.000 0.00 0.00 32.66 3.86
2216 2346 3.037549 CTGATTCTCCTGGTAGCTTCCT 58.962 50.000 11.05 0.00 0.00 3.36
2217 2347 2.768527 TGATTCTCCTGGTAGCTTCCTG 59.231 50.000 11.05 9.97 0.00 3.86
2218 2348 0.905357 TTCTCCTGGTAGCTTCCTGC 59.095 55.000 11.05 0.00 43.29 4.85
2227 2357 2.347490 GCTTCCTGCTTCCGGTGA 59.653 61.111 0.00 0.00 38.95 4.02
2228 2358 1.078143 GCTTCCTGCTTCCGGTGAT 60.078 57.895 0.00 0.00 38.95 3.06
2229 2359 1.372087 GCTTCCTGCTTCCGGTGATG 61.372 60.000 0.00 0.00 38.95 3.07
2230 2360 0.745845 CTTCCTGCTTCCGGTGATGG 60.746 60.000 0.00 0.00 0.00 3.51
2231 2361 2.124570 CCTGCTTCCGGTGATGGG 60.125 66.667 0.00 0.00 0.00 4.00
2233 2363 1.528824 CTGCTTCCGGTGATGGGAT 59.471 57.895 0.00 0.00 32.58 3.85
2234 2364 0.758734 CTGCTTCCGGTGATGGGATA 59.241 55.000 0.00 0.00 32.58 2.59
2237 2367 1.947456 GCTTCCGGTGATGGGATAAAC 59.053 52.381 0.00 0.00 32.58 2.01
2239 2369 3.181458 GCTTCCGGTGATGGGATAAACTA 60.181 47.826 0.00 0.00 32.58 2.24
2240 2370 4.685030 GCTTCCGGTGATGGGATAAACTAA 60.685 45.833 0.00 0.00 32.58 2.24
2241 2371 5.433526 CTTCCGGTGATGGGATAAACTAAA 58.566 41.667 0.00 0.00 32.58 1.85
2242 2372 5.640158 TCCGGTGATGGGATAAACTAAAT 57.360 39.130 0.00 0.00 0.00 1.40
2243 2373 6.750660 TCCGGTGATGGGATAAACTAAATA 57.249 37.500 0.00 0.00 0.00 1.40
2244 2374 6.765403 TCCGGTGATGGGATAAACTAAATAG 58.235 40.000 0.00 0.00 0.00 1.73
2245 2375 5.938125 CCGGTGATGGGATAAACTAAATAGG 59.062 44.000 0.00 0.00 0.00 2.57
2246 2376 6.239772 CCGGTGATGGGATAAACTAAATAGGA 60.240 42.308 0.00 0.00 0.00 2.94
2247 2377 6.649557 CGGTGATGGGATAAACTAAATAGGAC 59.350 42.308 0.00 0.00 0.00 3.85
2248 2378 7.514721 GGTGATGGGATAAACTAAATAGGACA 58.485 38.462 0.00 0.00 0.00 4.02
2249 2379 7.996644 GGTGATGGGATAAACTAAATAGGACAA 59.003 37.037 0.00 0.00 0.00 3.18
2250 2380 9.574516 GTGATGGGATAAACTAAATAGGACAAT 57.425 33.333 0.00 0.00 0.00 2.71
2253 2383 8.232913 TGGGATAAACTAAATAGGACAATTGC 57.767 34.615 5.05 0.00 0.00 3.56
2254 2384 8.058847 TGGGATAAACTAAATAGGACAATTGCT 58.941 33.333 5.05 0.00 0.00 3.91
2255 2385 8.352942 GGGATAAACTAAATAGGACAATTGCTG 58.647 37.037 5.05 0.00 0.00 4.41
2256 2386 9.120538 GGATAAACTAAATAGGACAATTGCTGA 57.879 33.333 5.05 0.00 0.00 4.26
2260 2390 8.814038 AACTAAATAGGACAATTGCTGATTCT 57.186 30.769 5.05 0.00 0.00 2.40
2263 2393 5.643421 ATAGGACAATTGCTGATTCTCCT 57.357 39.130 14.02 14.02 43.24 3.69
2264 2394 6.753913 ATAGGACAATTGCTGATTCTCCTA 57.246 37.500 16.67 16.67 44.47 2.94
2265 2395 5.033589 AGGACAATTGCTGATTCTCCTAG 57.966 43.478 5.05 0.00 40.24 3.02
2266 2396 4.472833 AGGACAATTGCTGATTCTCCTAGT 59.527 41.667 5.05 0.00 40.24 2.57
2267 2397 5.663106 AGGACAATTGCTGATTCTCCTAGTA 59.337 40.000 5.05 0.00 40.24 1.82
2268 2398 5.988561 GGACAATTGCTGATTCTCCTAGTAG 59.011 44.000 5.05 0.00 31.96 2.57
2269 2399 5.363939 ACAATTGCTGATTCTCCTAGTAGC 58.636 41.667 5.05 0.00 0.00 3.58
2270 2400 5.130145 ACAATTGCTGATTCTCCTAGTAGCT 59.870 40.000 5.05 0.00 32.66 3.32
2273 2403 3.639094 TGCTGATTCTCCTAGTAGCTTCC 59.361 47.826 0.00 0.00 32.66 3.46
2274 2404 3.895041 GCTGATTCTCCTAGTAGCTTCCT 59.105 47.826 0.00 0.00 0.00 3.36
2275 2405 4.261994 GCTGATTCTCCTAGTAGCTTCCTG 60.262 50.000 0.00 0.00 0.00 3.86
2276 2406 3.639094 TGATTCTCCTAGTAGCTTCCTGC 59.361 47.826 0.00 0.00 43.29 4.85
2299 3304 5.433526 CTTCCGGTGATGGGATAAACTAAA 58.566 41.667 0.00 0.00 32.58 1.85
2331 3336 5.521906 TGCTGATTCTAGGATGTGACTAC 57.478 43.478 0.00 0.00 0.00 2.73
2334 3339 7.007116 TGCTGATTCTAGGATGTGACTACTAT 58.993 38.462 0.00 0.00 0.00 2.12
2338 3343 9.298250 TGATTCTAGGATGTGACTACTATAACC 57.702 37.037 0.00 0.00 0.00 2.85
2390 3464 2.042686 TCTGTTACATCCTGCCATGC 57.957 50.000 0.00 0.00 0.00 4.06
2408 3482 3.986996 TGCGTGATGGGATCATATCAT 57.013 42.857 12.49 2.96 42.04 2.45
2409 3483 5.362263 CATGCGTGATGGGATCATATCATA 58.638 41.667 12.49 5.46 42.04 2.15
2410 3484 5.619132 TGCGTGATGGGATCATATCATAT 57.381 39.130 12.49 0.00 42.04 1.78
2411 3485 5.993055 TGCGTGATGGGATCATATCATATT 58.007 37.500 12.49 0.00 42.04 1.28
2412 3486 7.123355 TGCGTGATGGGATCATATCATATTA 57.877 36.000 12.49 1.30 42.04 0.98
2413 3487 7.738847 TGCGTGATGGGATCATATCATATTAT 58.261 34.615 12.49 0.00 42.04 1.28
2440 3514 8.887036 AATTTTATGTTTTGTTTCAGAGGGAC 57.113 30.769 0.00 0.00 0.00 4.46
2444 3518 5.261209 TGTTTTGTTTCAGAGGGACAATG 57.739 39.130 0.00 0.00 33.73 2.82
2447 3521 3.159213 TGTTTCAGAGGGACAATGCAT 57.841 42.857 0.00 0.00 0.00 3.96
2448 3522 3.499338 TGTTTCAGAGGGACAATGCATT 58.501 40.909 5.99 5.99 0.00 3.56
2463 3537 5.163622 ACAATGCATTGATTCCTTAGAACCG 60.164 40.000 38.99 12.65 40.14 4.44
2480 3554 1.138069 ACCGTTTTCCTGGCAAAAAGG 59.862 47.619 22.01 22.01 45.34 3.11
2532 3606 7.254852 TCATTGTTATTGAAGTATTTTCGGGC 58.745 34.615 0.00 0.00 0.00 6.13
2536 3610 1.083489 TGAAGTATTTTCGGGCGCTG 58.917 50.000 7.64 0.00 0.00 5.18
2546 3620 1.669115 CGGGCGCTGGATAAGATGG 60.669 63.158 7.64 0.00 0.00 3.51
2561 3635 3.263489 AGATGGCAGTCTGAACTCATG 57.737 47.619 3.32 0.00 31.71 3.07
2578 3652 4.697352 ACTCATGTTATTCTGCACTTCCAC 59.303 41.667 0.00 0.00 0.00 4.02
2582 3656 4.072131 TGTTATTCTGCACTTCCACTTCC 58.928 43.478 0.00 0.00 0.00 3.46
2622 3696 7.912056 TTATGAATCATGGTAAGCTGATAGC 57.088 36.000 5.91 0.00 42.84 2.97
2638 3712 5.331905 GCTGATAGCGAAATCGTGAACTTAG 60.332 44.000 4.59 0.00 42.22 2.18
2639 3713 5.647589 TGATAGCGAAATCGTGAACTTAGT 58.352 37.500 4.59 0.00 42.22 2.24
2640 3714 5.515270 TGATAGCGAAATCGTGAACTTAGTG 59.485 40.000 4.59 0.00 42.22 2.74
2668 3742 2.743636 TTCTTCTACCGCAGTTCCAG 57.256 50.000 0.00 0.00 0.00 3.86
2779 3853 0.529337 CAGCTCACCACTAGCATCCG 60.529 60.000 0.00 0.00 42.62 4.18
2785 3879 4.250464 CTCACCACTAGCATCCGTTTTTA 58.750 43.478 0.00 0.00 0.00 1.52
2832 3926 4.261741 CGGCTATGAGCAAGGCAATAATTT 60.262 41.667 0.21 0.00 44.75 1.82
2874 3970 5.711976 CCCACTCCATGACTTGTTCTAAAAT 59.288 40.000 0.00 0.00 0.00 1.82
2902 3998 5.127491 AGTTCGATAAACAACCTTGGTCAA 58.873 37.500 0.00 0.00 40.56 3.18
2995 4091 4.700268 CATGTTTGCATACCTTGTAGCA 57.300 40.909 4.77 0.00 33.30 3.49
2996 4092 5.058149 CATGTTTGCATACCTTGTAGCAA 57.942 39.130 4.77 0.00 44.36 3.91
2997 4093 5.653507 CATGTTTGCATACCTTGTAGCAAT 58.346 37.500 4.77 0.00 45.23 3.56
2999 4095 6.095432 TGTTTGCATACCTTGTAGCAATTT 57.905 33.333 4.77 0.00 45.23 1.82
3001 4097 5.973899 TTGCATACCTTGTAGCAATTTCA 57.026 34.783 0.00 0.00 41.55 2.69
3003 4099 5.893687 TGCATACCTTGTAGCAATTTCATG 58.106 37.500 0.00 0.00 33.48 3.07
3004 4100 5.163530 TGCATACCTTGTAGCAATTTCATGG 60.164 40.000 0.00 0.00 33.48 3.66
3006 4102 3.164268 ACCTTGTAGCAATTTCATGGCA 58.836 40.909 0.00 0.00 32.12 4.92
3007 4103 3.770933 ACCTTGTAGCAATTTCATGGCAT 59.229 39.130 0.00 0.00 32.12 4.40
3008 4104 4.223477 ACCTTGTAGCAATTTCATGGCATT 59.777 37.500 0.00 0.00 32.12 3.56
3011 4107 6.987992 CCTTGTAGCAATTTCATGGCATTATT 59.012 34.615 0.00 0.00 0.00 1.40
3014 4110 7.204604 TGTAGCAATTTCATGGCATTATTCTG 58.795 34.615 0.00 0.00 0.00 3.02
3016 4112 4.084745 GCAATTTCATGGCATTATTCTGCG 60.085 41.667 0.00 0.00 43.23 5.18
3018 4114 3.696281 TTCATGGCATTATTCTGCGTG 57.304 42.857 0.00 0.00 43.23 5.34
3019 4115 2.916640 TCATGGCATTATTCTGCGTGA 58.083 42.857 0.00 0.00 43.23 4.35
3020 4116 2.874086 TCATGGCATTATTCTGCGTGAG 59.126 45.455 0.00 0.00 43.23 3.51
3021 4117 2.689553 TGGCATTATTCTGCGTGAGA 57.310 45.000 0.00 0.00 43.23 3.27
3022 4118 2.984562 TGGCATTATTCTGCGTGAGAA 58.015 42.857 2.09 2.09 45.03 2.87
3024 4120 3.374988 TGGCATTATTCTGCGTGAGAAAG 59.625 43.478 3.55 0.00 44.11 2.62
3026 4122 4.260538 GGCATTATTCTGCGTGAGAAAGAG 60.261 45.833 3.55 0.00 44.11 2.85
3027 4123 4.784710 GCATTATTCTGCGTGAGAAAGAGC 60.785 45.833 3.55 3.21 44.11 4.09
3028 4124 2.462456 ATTCTGCGTGAGAAAGAGCA 57.538 45.000 3.55 0.00 44.11 4.26
3029 4125 2.238942 TTCTGCGTGAGAAAGAGCAA 57.761 45.000 0.00 0.00 37.78 3.91
3031 4127 1.202521 TCTGCGTGAGAAAGAGCAACA 60.203 47.619 0.00 0.00 39.26 3.33
3037 4133 2.158449 GTGAGAAAGAGCAACACGATGG 59.842 50.000 0.00 0.00 0.00 3.51
3038 4134 2.224281 TGAGAAAGAGCAACACGATGGT 60.224 45.455 0.00 0.00 0.00 3.55
3039 4135 2.808543 GAGAAAGAGCAACACGATGGTT 59.191 45.455 0.00 0.00 0.00 3.67
3040 4136 2.808543 AGAAAGAGCAACACGATGGTTC 59.191 45.455 0.00 0.00 0.00 3.62
3042 4138 2.254546 AGAGCAACACGATGGTTCAA 57.745 45.000 0.00 0.00 0.00 2.69
3043 4139 2.783135 AGAGCAACACGATGGTTCAAT 58.217 42.857 0.00 0.00 0.00 2.57
3045 4141 3.684788 AGAGCAACACGATGGTTCAATAC 59.315 43.478 0.00 0.00 0.00 1.89
3046 4142 3.407698 AGCAACACGATGGTTCAATACA 58.592 40.909 0.00 0.00 0.00 2.29
3047 4143 3.818210 AGCAACACGATGGTTCAATACAA 59.182 39.130 0.00 0.00 0.00 2.41
3048 4144 3.911964 GCAACACGATGGTTCAATACAAC 59.088 43.478 0.00 0.00 0.00 3.32
3054 4438 6.653320 ACACGATGGTTCAATACAACAGTAAT 59.347 34.615 0.00 0.00 0.00 1.89
3066 4450 9.153721 CAATACAACAGTAATTTCATGGCATTT 57.846 29.630 0.00 0.00 0.00 2.32
3073 4457 4.932268 AATTTCATGGCATTTTTCTGCG 57.068 36.364 0.00 0.00 43.23 5.18
3074 4458 3.383620 TTTCATGGCATTTTTCTGCGT 57.616 38.095 0.00 0.00 43.23 5.24
3075 4459 2.350899 TCATGGCATTTTTCTGCGTG 57.649 45.000 0.00 0.00 43.23 5.34
3080 4464 2.030893 TGGCATTTTTCTGCGTGAGAAG 60.031 45.455 0.00 0.00 41.86 2.85
3128 4512 5.591643 TCACAGTAGCGCTTTTCTTTTAG 57.408 39.130 18.68 3.10 0.00 1.85
3130 4514 5.176958 TCACAGTAGCGCTTTTCTTTTAGTC 59.823 40.000 18.68 0.00 0.00 2.59
3140 4524 5.513141 GCTTTTCTTTTAGTCGATTGGCATC 59.487 40.000 0.00 0.00 0.00 3.91
3159 4543 3.300711 GACACTTAACGTGGCCTGT 57.699 52.632 3.32 0.00 46.42 4.00
3169 4563 0.865769 CGTGGCCTGTGTTCAGTTAC 59.134 55.000 3.32 0.00 39.82 2.50
3178 4572 5.050295 GCCTGTGTTCAGTTACTGTTACTTC 60.050 44.000 12.41 9.51 39.82 3.01
3191 4585 2.100916 TGTTACTTCGCTAGCTCATCCC 59.899 50.000 13.93 0.00 0.00 3.85
3201 4595 3.742640 GCTAGCTCATCCCGAGATTGTTT 60.743 47.826 7.70 0.00 45.45 2.83
3202 4596 2.636830 AGCTCATCCCGAGATTGTTTG 58.363 47.619 0.00 0.00 45.45 2.93
3203 4597 1.672881 GCTCATCCCGAGATTGTTTGG 59.327 52.381 0.00 0.00 45.45 3.28
3204 4598 2.680805 GCTCATCCCGAGATTGTTTGGA 60.681 50.000 0.00 0.00 45.45 3.53
3205 4599 3.813443 CTCATCCCGAGATTGTTTGGAT 58.187 45.455 0.00 0.00 45.45 3.41
3206 4600 4.202441 CTCATCCCGAGATTGTTTGGATT 58.798 43.478 0.00 0.00 45.45 3.01
3207 4601 4.599041 TCATCCCGAGATTGTTTGGATTT 58.401 39.130 0.00 0.00 33.60 2.17
3208 4602 5.016173 TCATCCCGAGATTGTTTGGATTTT 58.984 37.500 0.00 0.00 33.60 1.82
3209 4603 5.480073 TCATCCCGAGATTGTTTGGATTTTT 59.520 36.000 0.00 0.00 33.60 1.94
3221 4615 7.610580 TGTTTGGATTTTTGGATTCTACCTT 57.389 32.000 0.00 0.00 0.00 3.50
3226 4620 6.659242 TGGATTTTTGGATTCTACCTTCTCAC 59.341 38.462 0.00 0.00 0.00 3.51
3227 4621 6.659242 GGATTTTTGGATTCTACCTTCTCACA 59.341 38.462 0.00 0.00 0.00 3.58
3283 4703 5.863935 GGAAATGGTGAAGATTTTTCTTCCG 59.136 40.000 11.96 0.00 43.94 4.30
3287 4707 6.945938 TGGTGAAGATTTTTCTTCCGTTAA 57.054 33.333 11.96 0.00 43.94 2.01
3293 4713 7.594758 TGAAGATTTTTCTTCCGTTAATGCAAG 59.405 33.333 11.96 0.00 43.94 4.01
3313 4734 4.322080 AGTGTGTGATCGTTCTTCAGAA 57.678 40.909 0.00 0.00 0.00 3.02
3354 4775 8.972458 TGCAAACAACAGGCTCTAATAATATA 57.028 30.769 0.00 0.00 0.00 0.86
3355 4776 9.056005 TGCAAACAACAGGCTCTAATAATATAG 57.944 33.333 0.00 0.00 0.00 1.31
3356 4777 8.507249 GCAAACAACAGGCTCTAATAATATAGG 58.493 37.037 0.00 0.00 0.00 2.57
3357 4778 8.507249 CAAACAACAGGCTCTAATAATATAGGC 58.493 37.037 0.00 0.00 32.80 3.93
3358 4779 7.316393 ACAACAGGCTCTAATAATATAGGCA 57.684 36.000 0.00 0.00 34.43 4.75
3359 4780 7.922382 ACAACAGGCTCTAATAATATAGGCAT 58.078 34.615 0.00 0.00 34.43 4.40
3360 4781 7.826252 ACAACAGGCTCTAATAATATAGGCATG 59.174 37.037 0.00 0.00 37.14 4.06
3361 4782 7.502060 ACAGGCTCTAATAATATAGGCATGT 57.498 36.000 0.00 0.00 38.28 3.21
3362 4783 8.609617 ACAGGCTCTAATAATATAGGCATGTA 57.390 34.615 10.88 0.00 39.72 2.29
3363 4784 9.218525 ACAGGCTCTAATAATATAGGCATGTAT 57.781 33.333 10.88 0.00 39.72 2.29
3387 4808 3.123050 GTGTCAATTTGGTGTTTCAGCC 58.877 45.455 0.00 0.00 0.00 4.85
3405 4826 2.890945 AGCCGTTCATAAAGCCTTGTTT 59.109 40.909 0.00 0.00 0.00 2.83
3419 4840 6.418057 AGCCTTGTTTTATGGTTTGATTCA 57.582 33.333 0.00 0.00 0.00 2.57
3423 4844 7.328493 GCCTTGTTTTATGGTTTGATTCAGTAC 59.672 37.037 0.00 0.00 0.00 2.73
3424 4845 7.537306 CCTTGTTTTATGGTTTGATTCAGTACG 59.463 37.037 0.00 0.00 0.00 3.67
3425 4846 6.904498 TGTTTTATGGTTTGATTCAGTACGG 58.096 36.000 0.00 0.00 0.00 4.02
3427 4848 7.228906 TGTTTTATGGTTTGATTCAGTACGGAA 59.771 33.333 10.92 10.92 0.00 4.30
3429 4850 7.747155 TTATGGTTTGATTCAGTACGGAAAA 57.253 32.000 12.50 0.93 0.00 2.29
3430 4851 6.834168 ATGGTTTGATTCAGTACGGAAAAT 57.166 33.333 12.50 0.00 0.00 1.82
3440 4861 7.795482 TTCAGTACGGAAAATGAAGAAAAGA 57.205 32.000 5.94 0.00 0.00 2.52
3441 4862 7.979444 TCAGTACGGAAAATGAAGAAAAGAT 57.021 32.000 0.00 0.00 0.00 2.40
3471 4892 6.144402 CACTGTTGTTGATTTTAAGTGGATGC 59.856 38.462 0.00 0.00 31.98 3.91
3553 5144 0.525761 GGCGCTGGAAACAAAGCATA 59.474 50.000 7.64 0.00 42.47 3.14
3558 5149 4.862018 GCGCTGGAAACAAAGCATAATTTA 59.138 37.500 0.00 0.00 42.06 1.40
3559 5150 5.519927 GCGCTGGAAACAAAGCATAATTTAT 59.480 36.000 0.00 0.00 42.06 1.40
3588 5180 6.020440 CACAAAACAAAGCTACAGTGACAATG 60.020 38.462 0.41 0.41 0.00 2.82
3643 5236 8.938906 GTTTTTGACAGATGGCATTTTATTCAT 58.061 29.630 0.00 0.00 30.06 2.57
3654 5247 5.243283 GGCATTTTATTCATCAGAGCAGGAT 59.757 40.000 0.00 0.00 0.00 3.24
3681 5274 6.131961 ACATTAGCTCTTATTCCCAAGCAAT 58.868 36.000 0.00 0.00 37.22 3.56
3773 5374 1.975660 TACAACACAAAGGACTGCCC 58.024 50.000 0.00 0.00 33.31 5.36
3823 5424 5.723672 TCGCTAACCCCTAATCTAGAATG 57.276 43.478 0.00 0.00 0.00 2.67
3824 5425 5.391256 TCGCTAACCCCTAATCTAGAATGA 58.609 41.667 0.00 0.00 0.00 2.57
3858 5459 3.247173 CGCATATCTTCTGAGGAACTTGC 59.753 47.826 10.08 10.08 41.55 4.01
3998 5600 2.476619 CTGTCAAAGTGCACCTAGAACG 59.523 50.000 14.63 0.00 0.00 3.95
4018 5620 0.251354 GCCTTGAGCTCATGGTCTCA 59.749 55.000 36.00 14.60 41.65 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.743057 CATCGAGTATCTCAAAAGAGAACTTAT 57.257 33.333 0.00 2.03 33.85 1.73
33 34 8.740906 ACATCGAGTATCTCAAAAGAGAACTTA 58.259 33.333 0.00 0.20 33.85 2.24
34 35 7.607250 ACATCGAGTATCTCAAAAGAGAACTT 58.393 34.615 0.00 0.00 33.85 2.66
35 36 7.164230 ACATCGAGTATCTCAAAAGAGAACT 57.836 36.000 0.00 5.03 35.47 3.01
36 37 8.912787 TTACATCGAGTATCTCAAAAGAGAAC 57.087 34.615 0.00 0.71 34.24 3.01
45 46 9.463443 CACACATTTATTACATCGAGTATCTCA 57.537 33.333 0.00 0.00 31.53 3.27
46 47 9.678941 TCACACATTTATTACATCGAGTATCTC 57.321 33.333 0.00 0.00 31.53 2.75
50 51 8.547894 GCAATCACACATTTATTACATCGAGTA 58.452 33.333 0.00 0.00 0.00 2.59
51 52 7.280876 AGCAATCACACATTTATTACATCGAGT 59.719 33.333 0.00 0.00 0.00 4.18
52 53 7.633621 AGCAATCACACATTTATTACATCGAG 58.366 34.615 0.00 0.00 0.00 4.04
53 54 7.552458 AGCAATCACACATTTATTACATCGA 57.448 32.000 0.00 0.00 0.00 3.59
54 55 8.551205 AGTAGCAATCACACATTTATTACATCG 58.449 33.333 0.00 0.00 0.00 3.84
55 56 9.869844 GAGTAGCAATCACACATTTATTACATC 57.130 33.333 0.00 0.00 0.00 3.06
56 57 9.618890 AGAGTAGCAATCACACATTTATTACAT 57.381 29.630 0.00 0.00 0.00 2.29
57 58 8.882736 CAGAGTAGCAATCACACATTTATTACA 58.117 33.333 0.00 0.00 0.00 2.41
58 59 8.883731 ACAGAGTAGCAATCACACATTTATTAC 58.116 33.333 0.00 0.00 0.00 1.89
59 60 9.448438 AACAGAGTAGCAATCACACATTTATTA 57.552 29.630 0.00 0.00 0.00 0.98
60 61 7.928307 ACAGAGTAGCAATCACACATTTATT 57.072 32.000 0.00 0.00 0.00 1.40
61 62 7.928307 AACAGAGTAGCAATCACACATTTAT 57.072 32.000 0.00 0.00 0.00 1.40
63 64 7.928307 ATAACAGAGTAGCAATCACACATTT 57.072 32.000 0.00 0.00 0.00 2.32
64 65 9.448438 TTTATAACAGAGTAGCAATCACACATT 57.552 29.630 0.00 0.00 0.00 2.71
65 66 9.618890 ATTTATAACAGAGTAGCAATCACACAT 57.381 29.630 0.00 0.00 0.00 3.21
66 67 9.098355 GATTTATAACAGAGTAGCAATCACACA 57.902 33.333 0.00 0.00 0.00 3.72
67 68 8.552034 GGATTTATAACAGAGTAGCAATCACAC 58.448 37.037 0.00 0.00 0.00 3.82
68 69 8.486210 AGGATTTATAACAGAGTAGCAATCACA 58.514 33.333 0.00 0.00 0.00 3.58
69 70 8.894768 AGGATTTATAACAGAGTAGCAATCAC 57.105 34.615 0.00 0.00 0.00 3.06
70 71 8.150945 GGAGGATTTATAACAGAGTAGCAATCA 58.849 37.037 0.00 0.00 0.00 2.57
71 72 7.329717 CGGAGGATTTATAACAGAGTAGCAATC 59.670 40.741 0.00 0.00 0.00 2.67
72 73 7.015292 TCGGAGGATTTATAACAGAGTAGCAAT 59.985 37.037 0.00 0.00 0.00 3.56
73 74 6.322969 TCGGAGGATTTATAACAGAGTAGCAA 59.677 38.462 0.00 0.00 0.00 3.91
74 75 5.831525 TCGGAGGATTTATAACAGAGTAGCA 59.168 40.000 0.00 0.00 0.00 3.49
75 76 6.016108 ACTCGGAGGATTTATAACAGAGTAGC 60.016 42.308 10.23 0.00 35.20 3.58
76 77 7.513371 ACTCGGAGGATTTATAACAGAGTAG 57.487 40.000 10.23 0.00 35.20 2.57
77 78 8.216423 AGTACTCGGAGGATTTATAACAGAGTA 58.784 37.037 10.23 0.00 37.28 2.59
78 79 7.013464 CAGTACTCGGAGGATTTATAACAGAGT 59.987 40.741 10.23 9.57 38.82 3.24
79 80 7.013464 ACAGTACTCGGAGGATTTATAACAGAG 59.987 40.741 10.23 0.00 0.00 3.35
80 81 6.832384 ACAGTACTCGGAGGATTTATAACAGA 59.168 38.462 10.23 0.00 0.00 3.41
81 82 6.918569 CACAGTACTCGGAGGATTTATAACAG 59.081 42.308 10.23 0.00 0.00 3.16
82 83 6.379133 ACACAGTACTCGGAGGATTTATAACA 59.621 38.462 10.23 0.00 0.00 2.41
83 84 6.696148 CACACAGTACTCGGAGGATTTATAAC 59.304 42.308 10.23 0.00 0.00 1.89
84 85 6.183360 CCACACAGTACTCGGAGGATTTATAA 60.183 42.308 10.23 0.00 0.00 0.98
85 86 5.301045 CCACACAGTACTCGGAGGATTTATA 59.699 44.000 10.23 0.00 0.00 0.98
86 87 4.099573 CCACACAGTACTCGGAGGATTTAT 59.900 45.833 10.23 0.00 0.00 1.40
87 88 3.446161 CCACACAGTACTCGGAGGATTTA 59.554 47.826 10.23 0.00 0.00 1.40
88 89 2.233922 CCACACAGTACTCGGAGGATTT 59.766 50.000 10.23 0.00 0.00 2.17
89 90 1.825474 CCACACAGTACTCGGAGGATT 59.175 52.381 10.23 0.00 0.00 3.01
90 91 1.272536 ACCACACAGTACTCGGAGGAT 60.273 52.381 10.23 0.00 0.00 3.24
91 92 0.111832 ACCACACAGTACTCGGAGGA 59.888 55.000 10.23 0.00 0.00 3.71
92 93 0.243907 CACCACACAGTACTCGGAGG 59.756 60.000 10.23 0.00 0.00 4.30
93 94 0.959553 ACACCACACAGTACTCGGAG 59.040 55.000 2.83 2.83 0.00 4.63
94 95 0.956633 GACACCACACAGTACTCGGA 59.043 55.000 0.00 0.00 0.00 4.55
95 96 0.671796 TGACACCACACAGTACTCGG 59.328 55.000 0.00 0.00 0.00 4.63
96 97 1.930817 GCTGACACCACACAGTACTCG 60.931 57.143 0.00 0.00 36.62 4.18
97 98 1.068588 TGCTGACACCACACAGTACTC 59.931 52.381 0.00 0.00 36.62 2.59
98 99 1.119684 TGCTGACACCACACAGTACT 58.880 50.000 0.00 0.00 36.62 2.73
99 100 2.169832 ATGCTGACACCACACAGTAC 57.830 50.000 0.00 0.00 36.62 2.73
100 101 2.928801 AATGCTGACACCACACAGTA 57.071 45.000 0.00 0.00 36.62 2.74
101 102 2.104792 AGTAATGCTGACACCACACAGT 59.895 45.455 0.00 0.00 36.62 3.55
102 103 2.771089 AGTAATGCTGACACCACACAG 58.229 47.619 0.00 0.00 37.22 3.66
103 104 2.928801 AGTAATGCTGACACCACACA 57.071 45.000 0.00 0.00 0.00 3.72
113 114 4.514441 GTCATTCCTGGATCAGTAATGCTG 59.486 45.833 0.00 0.00 46.34 4.41
114 115 4.164796 TGTCATTCCTGGATCAGTAATGCT 59.835 41.667 0.00 0.00 37.60 3.79
115 116 4.274459 GTGTCATTCCTGGATCAGTAATGC 59.726 45.833 0.00 5.20 37.60 3.56
116 117 4.818546 GGTGTCATTCCTGGATCAGTAATG 59.181 45.833 0.00 6.81 38.55 1.90
117 118 4.443457 CGGTGTCATTCCTGGATCAGTAAT 60.443 45.833 0.00 0.00 0.00 1.89
118 119 3.118775 CGGTGTCATTCCTGGATCAGTAA 60.119 47.826 0.00 0.00 0.00 2.24
119 120 2.430694 CGGTGTCATTCCTGGATCAGTA 59.569 50.000 0.00 0.00 0.00 2.74
120 121 1.208052 CGGTGTCATTCCTGGATCAGT 59.792 52.381 0.00 0.00 0.00 3.41
121 122 1.473965 CCGGTGTCATTCCTGGATCAG 60.474 57.143 0.00 0.00 0.00 2.90
122 123 0.541392 CCGGTGTCATTCCTGGATCA 59.459 55.000 0.00 0.00 0.00 2.92
123 124 0.830648 TCCGGTGTCATTCCTGGATC 59.169 55.000 0.00 0.00 0.00 3.36
124 125 0.833287 CTCCGGTGTCATTCCTGGAT 59.167 55.000 0.00 0.00 31.40 3.41
125 126 1.899437 GCTCCGGTGTCATTCCTGGA 61.899 60.000 0.00 0.00 0.00 3.86
126 127 1.450312 GCTCCGGTGTCATTCCTGG 60.450 63.158 0.00 0.00 0.00 4.45
127 128 1.021390 GTGCTCCGGTGTCATTCCTG 61.021 60.000 0.00 0.00 0.00 3.86
128 129 1.296715 GTGCTCCGGTGTCATTCCT 59.703 57.895 0.00 0.00 0.00 3.36
129 130 1.003839 TGTGCTCCGGTGTCATTCC 60.004 57.895 0.00 0.00 0.00 3.01
130 131 0.037326 TCTGTGCTCCGGTGTCATTC 60.037 55.000 0.00 0.00 0.00 2.67
131 132 0.036952 CTCTGTGCTCCGGTGTCATT 60.037 55.000 0.00 0.00 0.00 2.57
132 133 0.900182 TCTCTGTGCTCCGGTGTCAT 60.900 55.000 0.00 0.00 0.00 3.06
133 134 0.900182 ATCTCTGTGCTCCGGTGTCA 60.900 55.000 0.00 2.40 0.00 3.58
134 135 0.179124 GATCTCTGTGCTCCGGTGTC 60.179 60.000 0.00 0.00 0.00 3.67
135 136 0.900182 TGATCTCTGTGCTCCGGTGT 60.900 55.000 0.00 0.00 0.00 4.16
136 137 0.179116 CTGATCTCTGTGCTCCGGTG 60.179 60.000 0.00 0.00 0.00 4.94
137 138 0.323816 TCTGATCTCTGTGCTCCGGT 60.324 55.000 0.00 0.00 0.00 5.28
138 139 0.102120 GTCTGATCTCTGTGCTCCGG 59.898 60.000 0.00 0.00 0.00 5.14
139 140 0.102120 GGTCTGATCTCTGTGCTCCG 59.898 60.000 0.00 0.00 0.00 4.63
140 141 0.102120 CGGTCTGATCTCTGTGCTCC 59.898 60.000 0.00 0.00 0.00 4.70
141 142 0.814457 ACGGTCTGATCTCTGTGCTC 59.186 55.000 0.00 0.00 0.00 4.26
142 143 1.261480 AACGGTCTGATCTCTGTGCT 58.739 50.000 0.00 0.00 0.00 4.40
143 144 2.086054 AAACGGTCTGATCTCTGTGC 57.914 50.000 0.00 0.00 0.00 4.57
144 145 5.060662 TCTTAAACGGTCTGATCTCTGTG 57.939 43.478 0.00 0.00 0.00 3.66
145 146 5.654650 AGATCTTAAACGGTCTGATCTCTGT 59.345 40.000 6.90 0.00 39.44 3.41
146 147 5.976534 CAGATCTTAAACGGTCTGATCTCTG 59.023 44.000 9.05 0.00 41.01 3.35
147 148 5.068460 CCAGATCTTAAACGGTCTGATCTCT 59.932 44.000 6.56 0.00 41.01 3.10
148 149 5.163499 ACCAGATCTTAAACGGTCTGATCTC 60.163 44.000 6.56 0.00 41.01 2.75
149 150 4.712337 ACCAGATCTTAAACGGTCTGATCT 59.288 41.667 6.56 6.90 42.92 2.75
150 151 5.012328 ACCAGATCTTAAACGGTCTGATC 57.988 43.478 6.56 3.13 40.30 2.92
151 152 4.440250 CGACCAGATCTTAAACGGTCTGAT 60.440 45.833 20.87 0.00 43.27 2.90
152 153 3.119602 CGACCAGATCTTAAACGGTCTGA 60.120 47.826 20.87 0.00 43.27 3.27
153 154 3.179830 CGACCAGATCTTAAACGGTCTG 58.820 50.000 20.87 13.47 43.27 3.51
154 155 2.416972 GCGACCAGATCTTAAACGGTCT 60.417 50.000 20.87 0.00 43.27 3.85
155 156 1.925185 GCGACCAGATCTTAAACGGTC 59.075 52.381 15.90 15.90 42.25 4.79
156 157 1.549170 AGCGACCAGATCTTAAACGGT 59.451 47.619 1.42 1.42 0.00 4.83
157 158 2.295253 AGCGACCAGATCTTAAACGG 57.705 50.000 0.00 0.00 0.00 4.44
158 159 3.766151 TGTAGCGACCAGATCTTAAACG 58.234 45.455 0.00 0.00 0.00 3.60
159 160 4.563184 CACTGTAGCGACCAGATCTTAAAC 59.437 45.833 0.00 0.00 34.04 2.01
160 161 4.219944 ACACTGTAGCGACCAGATCTTAAA 59.780 41.667 0.00 0.00 34.04 1.52
161 162 3.762288 ACACTGTAGCGACCAGATCTTAA 59.238 43.478 0.00 0.00 34.04 1.85
162 163 3.353557 ACACTGTAGCGACCAGATCTTA 58.646 45.455 0.00 0.00 34.04 2.10
163 164 2.171840 ACACTGTAGCGACCAGATCTT 58.828 47.619 0.00 0.00 34.04 2.40
164 165 1.840737 ACACTGTAGCGACCAGATCT 58.159 50.000 7.22 0.00 34.04 2.75
165 166 2.531206 GAACACTGTAGCGACCAGATC 58.469 52.381 7.22 0.00 34.04 2.75
166 167 1.204941 GGAACACTGTAGCGACCAGAT 59.795 52.381 7.22 0.00 34.04 2.90
167 168 0.601558 GGAACACTGTAGCGACCAGA 59.398 55.000 7.22 0.00 34.04 3.86
168 169 0.603569 AGGAACACTGTAGCGACCAG 59.396 55.000 0.00 0.00 36.01 4.00
169 170 0.601558 GAGGAACACTGTAGCGACCA 59.398 55.000 0.00 0.00 0.00 4.02
170 171 0.108756 GGAGGAACACTGTAGCGACC 60.109 60.000 0.00 0.00 0.00 4.79
171 172 0.456312 CGGAGGAACACTGTAGCGAC 60.456 60.000 0.00 0.00 0.00 5.19
172 173 0.607217 TCGGAGGAACACTGTAGCGA 60.607 55.000 0.00 0.00 0.00 4.93
173 174 0.242825 TTCGGAGGAACACTGTAGCG 59.757 55.000 0.00 0.00 0.00 4.26
174 175 2.450609 TTTCGGAGGAACACTGTAGC 57.549 50.000 0.00 0.00 0.00 3.58
175 176 4.567159 GCTATTTTCGGAGGAACACTGTAG 59.433 45.833 0.00 0.00 0.00 2.74
176 177 4.020928 TGCTATTTTCGGAGGAACACTGTA 60.021 41.667 0.00 0.00 0.00 2.74
177 178 3.244422 TGCTATTTTCGGAGGAACACTGT 60.244 43.478 0.00 0.00 0.00 3.55
178 179 3.125316 GTGCTATTTTCGGAGGAACACTG 59.875 47.826 0.00 0.00 0.00 3.66
191 192 7.172532 TCGGCGATTATAATGAAGTGCTATTTT 59.827 33.333 4.99 0.00 0.00 1.82
193 194 6.163476 TCGGCGATTATAATGAAGTGCTATT 58.837 36.000 4.99 0.00 0.00 1.73
213 214 1.948104 TACCTTATGTGTGCATCGGC 58.052 50.000 0.00 0.00 41.68 5.54
222 223 9.388506 AGAAGTGAATCTGAATTACCTTATGTG 57.611 33.333 0.00 0.00 0.00 3.21
400 402 3.031736 GGTCTGGCTATCTACTGGAACA 58.968 50.000 0.00 0.00 0.00 3.18
498 500 5.610398 TCTGCAAGAAACACAAGTATGAGA 58.390 37.500 0.00 0.00 42.31 3.27
522 524 2.058125 TTTGCCCCTTCCGTGCTGTA 62.058 55.000 0.00 0.00 0.00 2.74
524 526 2.597217 TTTGCCCCTTCCGTGCTG 60.597 61.111 0.00 0.00 0.00 4.41
558 560 0.319641 ACGACGGTTCAAGAGCTTCC 60.320 55.000 0.00 0.00 0.00 3.46
567 569 2.232296 GCAACGACACGACGGTTCA 61.232 57.895 0.00 0.00 37.61 3.18
577 579 3.053291 GCGGGATTGGCAACGACA 61.053 61.111 12.21 0.00 42.51 4.35
610 612 3.062639 GCCGCCAGTCATTATGAATATCG 59.937 47.826 0.00 2.91 0.00 2.92
620 622 1.741770 GAGTTCGCCGCCAGTCATT 60.742 57.895 0.00 0.00 0.00 2.57
652 740 3.653539 TCCGATTCTGTTTCGACTTGA 57.346 42.857 0.00 0.00 38.88 3.02
659 747 5.048713 ACATCTGGTTTTCCGATTCTGTTTC 60.049 40.000 0.00 0.00 44.36 2.78
668 756 3.981071 AGATCACATCTGGTTTTCCGA 57.019 42.857 0.00 0.00 44.36 4.55
683 771 5.245977 TGAAGTAGATGTTGGTGTCAGATCA 59.754 40.000 0.00 0.00 0.00 2.92
705 793 2.274104 GGGGTTTAGCCGCCATGA 59.726 61.111 0.00 0.00 43.72 3.07
768 856 0.390472 CGTCTTCCTCCCAGCACTTC 60.390 60.000 0.00 0.00 0.00 3.01
776 864 1.437986 CGATCCACGTCTTCCTCCC 59.562 63.158 0.00 0.00 37.22 4.30
832 920 2.417787 GGTTTAACTACTCCGACGGCAT 60.418 50.000 9.66 1.53 0.00 4.40
838 926 3.941483 CGACTAGGGTTTAACTACTCCGA 59.059 47.826 0.00 0.00 0.00 4.55
878 966 0.104304 AGTAGTTGGCGGCGGAATAG 59.896 55.000 9.78 0.00 0.00 1.73
882 970 2.992689 TGAGTAGTTGGCGGCGGA 60.993 61.111 9.78 0.00 0.00 5.54
883 971 1.940883 TACTGAGTAGTTGGCGGCGG 61.941 60.000 9.78 0.00 38.36 6.13
884 972 0.108992 TTACTGAGTAGTTGGCGGCG 60.109 55.000 0.51 0.51 38.36 6.46
885 973 2.202566 GATTACTGAGTAGTTGGCGGC 58.797 52.381 0.00 0.00 38.36 6.53
886 974 2.460918 CGATTACTGAGTAGTTGGCGG 58.539 52.381 0.00 0.00 38.36 6.13
887 975 1.852895 GCGATTACTGAGTAGTTGGCG 59.147 52.381 4.77 0.00 38.36 5.69
888 976 3.166489 AGCGATTACTGAGTAGTTGGC 57.834 47.619 4.77 4.72 38.36 4.52
889 977 3.307242 GCAAGCGATTACTGAGTAGTTGG 59.693 47.826 4.77 0.00 38.36 3.77
890 978 4.177026 AGCAAGCGATTACTGAGTAGTTG 58.823 43.478 0.00 0.00 38.36 3.16
891 979 4.457834 AGCAAGCGATTACTGAGTAGTT 57.542 40.909 0.00 0.00 38.36 2.24
892 980 4.457834 AAGCAAGCGATTACTGAGTAGT 57.542 40.909 0.00 0.00 40.99 2.73
893 981 5.786401 AAAAGCAAGCGATTACTGAGTAG 57.214 39.130 0.00 0.00 0.00 2.57
894 982 7.676338 GCATAAAAAGCAAGCGATTACTGAGTA 60.676 37.037 0.00 0.00 0.00 2.59
895 983 6.546395 CATAAAAAGCAAGCGATTACTGAGT 58.454 36.000 0.00 0.00 0.00 3.41
896 984 5.453587 GCATAAAAAGCAAGCGATTACTGAG 59.546 40.000 0.00 0.00 0.00 3.35
897 985 5.331902 GCATAAAAAGCAAGCGATTACTGA 58.668 37.500 0.00 0.00 0.00 3.41
898 986 5.610908 GCATAAAAAGCAAGCGATTACTG 57.389 39.130 0.00 0.00 0.00 2.74
906 994 5.331902 TCATAACTCGCATAAAAAGCAAGC 58.668 37.500 0.00 0.00 0.00 4.01
907 995 5.967674 CCTCATAACTCGCATAAAAAGCAAG 59.032 40.000 0.00 0.00 0.00 4.01
908 996 5.163663 CCCTCATAACTCGCATAAAAAGCAA 60.164 40.000 0.00 0.00 0.00 3.91
909 997 4.335315 CCCTCATAACTCGCATAAAAAGCA 59.665 41.667 0.00 0.00 0.00 3.91
910 998 4.574828 TCCCTCATAACTCGCATAAAAAGC 59.425 41.667 0.00 0.00 0.00 3.51
911 999 6.677781 TTCCCTCATAACTCGCATAAAAAG 57.322 37.500 0.00 0.00 0.00 2.27
912 1000 6.601613 ACATTCCCTCATAACTCGCATAAAAA 59.398 34.615 0.00 0.00 0.00 1.94
913 1001 6.119536 ACATTCCCTCATAACTCGCATAAAA 58.880 36.000 0.00 0.00 0.00 1.52
914 1002 5.680619 ACATTCCCTCATAACTCGCATAAA 58.319 37.500 0.00 0.00 0.00 1.40
915 1003 5.290493 ACATTCCCTCATAACTCGCATAA 57.710 39.130 0.00 0.00 0.00 1.90
916 1004 4.955811 ACATTCCCTCATAACTCGCATA 57.044 40.909 0.00 0.00 0.00 3.14
917 1005 3.845781 ACATTCCCTCATAACTCGCAT 57.154 42.857 0.00 0.00 0.00 4.73
918 1006 3.270027 CAACATTCCCTCATAACTCGCA 58.730 45.455 0.00 0.00 0.00 5.10
919 1007 2.614057 CCAACATTCCCTCATAACTCGC 59.386 50.000 0.00 0.00 0.00 5.03
920 1008 3.206150 CCCAACATTCCCTCATAACTCG 58.794 50.000 0.00 0.00 0.00 4.18
921 1009 3.947834 CACCCAACATTCCCTCATAACTC 59.052 47.826 0.00 0.00 0.00 3.01
922 1010 3.591527 TCACCCAACATTCCCTCATAACT 59.408 43.478 0.00 0.00 0.00 2.24
923 1011 3.694566 GTCACCCAACATTCCCTCATAAC 59.305 47.826 0.00 0.00 0.00 1.89
924 1012 3.308832 GGTCACCCAACATTCCCTCATAA 60.309 47.826 0.00 0.00 0.00 1.90
925 1013 2.241176 GGTCACCCAACATTCCCTCATA 59.759 50.000 0.00 0.00 0.00 2.15
926 1014 1.005924 GGTCACCCAACATTCCCTCAT 59.994 52.381 0.00 0.00 0.00 2.90
930 1018 0.325602 TACGGTCACCCAACATTCCC 59.674 55.000 0.00 0.00 0.00 3.97
933 1021 2.253610 TCTCTACGGTCACCCAACATT 58.746 47.619 0.00 0.00 0.00 2.71
937 1025 2.600790 TCTTTCTCTACGGTCACCCAA 58.399 47.619 0.00 0.00 0.00 4.12
938 1026 2.297698 TCTTTCTCTACGGTCACCCA 57.702 50.000 0.00 0.00 0.00 4.51
946 1034 4.081087 TCCCCAATTCCTTCTTTCTCTACG 60.081 45.833 0.00 0.00 0.00 3.51
1002 1092 1.302285 CATGTCTCTGCTGGGCCTT 59.698 57.895 4.53 0.00 0.00 4.35
1009 1099 0.901124 GGAGTCACCATGTCTCTGCT 59.099 55.000 0.00 0.00 38.79 4.24
1011 1101 1.133982 CTCGGAGTCACCATGTCTCTG 59.866 57.143 0.00 5.78 39.29 3.35
1068 1164 1.190643 CTCTCTCTCCGCCTTCCTTT 58.809 55.000 0.00 0.00 0.00 3.11
1166 1279 0.528470 CGCCTCTTCTTCTTCTCCGT 59.472 55.000 0.00 0.00 0.00 4.69
1366 1479 3.897239 AGATCTCTATCCATCTAGGCGG 58.103 50.000 0.00 0.00 37.29 6.13
1540 1654 2.742053 CGAGAACACATCGGGAACAATT 59.258 45.455 0.00 0.00 36.54 2.32
1595 1709 9.580916 CATTGACGACGGAATATAACAAATTAG 57.419 33.333 0.00 0.00 0.00 1.73
1597 1711 7.981142 ACATTGACGACGGAATATAACAAATT 58.019 30.769 0.00 0.00 0.00 1.82
1658 1772 1.876714 CCGAACACGGCTACATCGG 60.877 63.158 0.00 0.00 45.88 4.18
1743 1857 1.205657 CGCAATGAAATGGAGCATGC 58.794 50.000 10.51 10.51 0.00 4.06
1775 1889 4.880120 AGACTCCGATACACGATCTTTACA 59.120 41.667 0.00 0.00 45.77 2.41
1776 1890 5.421212 AGACTCCGATACACGATCTTTAC 57.579 43.478 0.00 0.00 45.77 2.01
1778 1892 4.985538 AAGACTCCGATACACGATCTTT 57.014 40.909 0.00 0.00 45.77 2.52
1779 1893 4.985538 AAAGACTCCGATACACGATCTT 57.014 40.909 0.00 0.00 45.77 2.40
2139 2269 1.139853 CAGGAAGCTACCAGGATCACC 59.860 57.143 0.00 0.00 0.00 4.02
2140 2270 1.474143 GCAGGAAGCTACCAGGATCAC 60.474 57.143 0.00 0.00 41.15 3.06
2141 2271 0.833287 GCAGGAAGCTACCAGGATCA 59.167 55.000 0.00 0.00 41.15 2.92
2142 2272 3.696306 GCAGGAAGCTACCAGGATC 57.304 57.895 0.00 0.00 41.15 3.36
2182 2312 5.048224 CAGGAGAATCAGCAATTGTTCTGTT 60.048 40.000 12.34 7.02 38.75 3.16
2183 2313 4.458295 CAGGAGAATCAGCAATTGTTCTGT 59.542 41.667 12.34 0.00 38.75 3.41
2184 2314 4.142447 CCAGGAGAATCAGCAATTGTTCTG 60.142 45.833 12.34 9.56 41.76 3.02
2185 2315 4.015084 CCAGGAGAATCAGCAATTGTTCT 58.985 43.478 7.40 7.95 36.25 3.01
2186 2316 3.760684 ACCAGGAGAATCAGCAATTGTTC 59.239 43.478 7.40 2.96 36.25 3.18
2188 2318 3.446442 ACCAGGAGAATCAGCAATTGT 57.554 42.857 7.40 0.00 36.25 2.71
2189 2319 3.314635 GCTACCAGGAGAATCAGCAATTG 59.685 47.826 0.00 0.00 36.25 2.32
2191 2321 2.776536 AGCTACCAGGAGAATCAGCAAT 59.223 45.455 0.00 0.00 36.25 3.56
2192 2322 2.191400 AGCTACCAGGAGAATCAGCAA 58.809 47.619 0.00 0.00 36.25 3.91
2193 2323 1.871418 AGCTACCAGGAGAATCAGCA 58.129 50.000 0.00 0.00 36.25 4.41
2194 2324 2.484594 GGAAGCTACCAGGAGAATCAGC 60.485 54.545 0.00 0.00 36.25 4.26
2195 2325 3.037549 AGGAAGCTACCAGGAGAATCAG 58.962 50.000 0.00 0.00 36.25 2.90
2196 2326 2.768527 CAGGAAGCTACCAGGAGAATCA 59.231 50.000 0.00 0.00 36.25 2.57
2197 2327 2.484594 GCAGGAAGCTACCAGGAGAATC 60.485 54.545 0.00 0.00 41.15 2.52
2199 2329 0.905357 GCAGGAAGCTACCAGGAGAA 59.095 55.000 0.00 0.00 41.15 2.87
2200 2330 2.596776 GCAGGAAGCTACCAGGAGA 58.403 57.895 0.00 0.00 41.15 3.71
2210 2340 1.078143 ATCACCGGAAGCAGGAAGC 60.078 57.895 9.46 0.00 46.19 3.86
2211 2341 0.745845 CCATCACCGGAAGCAGGAAG 60.746 60.000 9.46 0.00 0.00 3.46
2212 2342 1.299648 CCATCACCGGAAGCAGGAA 59.700 57.895 9.46 0.00 0.00 3.36
2213 2343 2.669133 CCCATCACCGGAAGCAGGA 61.669 63.158 9.46 0.00 0.00 3.86
2214 2344 1.987807 ATCCCATCACCGGAAGCAGG 61.988 60.000 9.46 2.92 31.75 4.85
2216 2346 1.208706 TTATCCCATCACCGGAAGCA 58.791 50.000 9.46 0.00 31.75 3.91
2217 2347 1.947456 GTTTATCCCATCACCGGAAGC 59.053 52.381 9.46 0.00 31.75 3.86
2218 2348 3.560636 AGTTTATCCCATCACCGGAAG 57.439 47.619 9.46 0.00 31.75 3.46
2219 2349 5.438698 TTTAGTTTATCCCATCACCGGAA 57.561 39.130 9.46 0.00 31.75 4.30
2220 2350 5.640158 ATTTAGTTTATCCCATCACCGGA 57.360 39.130 9.46 0.00 0.00 5.14
2222 2352 6.649557 GTCCTATTTAGTTTATCCCATCACCG 59.350 42.308 0.00 0.00 0.00 4.94
2223 2353 7.514721 TGTCCTATTTAGTTTATCCCATCACC 58.485 38.462 0.00 0.00 0.00 4.02
2224 2354 8.974060 TTGTCCTATTTAGTTTATCCCATCAC 57.026 34.615 0.00 0.00 0.00 3.06
2227 2357 8.860088 GCAATTGTCCTATTTAGTTTATCCCAT 58.140 33.333 7.40 0.00 0.00 4.00
2228 2358 8.058847 AGCAATTGTCCTATTTAGTTTATCCCA 58.941 33.333 7.40 0.00 0.00 4.37
2229 2359 8.352942 CAGCAATTGTCCTATTTAGTTTATCCC 58.647 37.037 7.40 0.00 0.00 3.85
2230 2360 9.120538 TCAGCAATTGTCCTATTTAGTTTATCC 57.879 33.333 7.40 0.00 0.00 2.59
2234 2364 9.247861 AGAATCAGCAATTGTCCTATTTAGTTT 57.752 29.630 7.40 0.00 0.00 2.66
2245 2375 5.465056 GCTACTAGGAGAATCAGCAATTGTC 59.535 44.000 6.02 0.00 37.01 3.18
2246 2376 5.130145 AGCTACTAGGAGAATCAGCAATTGT 59.870 40.000 6.02 0.00 36.25 2.71
2247 2377 5.609423 AGCTACTAGGAGAATCAGCAATTG 58.391 41.667 6.02 0.00 36.25 2.32
2248 2378 5.885449 AGCTACTAGGAGAATCAGCAATT 57.115 39.130 6.02 0.00 36.25 2.32
2249 2379 5.221621 GGAAGCTACTAGGAGAATCAGCAAT 60.222 44.000 6.02 0.00 36.25 3.56
2250 2380 4.100189 GGAAGCTACTAGGAGAATCAGCAA 59.900 45.833 6.02 0.00 36.25 3.91
2251 2381 3.639094 GGAAGCTACTAGGAGAATCAGCA 59.361 47.826 6.02 0.00 36.25 4.41
2252 2382 3.895041 AGGAAGCTACTAGGAGAATCAGC 59.105 47.826 6.02 0.00 36.25 4.26
2253 2383 4.261994 GCAGGAAGCTACTAGGAGAATCAG 60.262 50.000 6.02 1.07 41.15 2.90
2254 2384 3.639094 GCAGGAAGCTACTAGGAGAATCA 59.361 47.826 6.02 0.00 41.15 2.57
2255 2385 4.251543 GCAGGAAGCTACTAGGAGAATC 57.748 50.000 6.02 2.36 41.15 2.52
2268 2398 1.078143 ATCACCGGAAGCAGGAAGC 60.078 57.895 9.46 0.00 46.19 3.86
2269 2399 0.745845 CCATCACCGGAAGCAGGAAG 60.746 60.000 9.46 0.00 0.00 3.46
2270 2400 1.299648 CCATCACCGGAAGCAGGAA 59.700 57.895 9.46 0.00 0.00 3.36
2273 2403 0.758734 TATCCCATCACCGGAAGCAG 59.241 55.000 9.46 0.00 31.75 4.24
2274 2404 1.208706 TTATCCCATCACCGGAAGCA 58.791 50.000 9.46 0.00 31.75 3.91
2275 2405 1.947456 GTTTATCCCATCACCGGAAGC 59.053 52.381 9.46 0.00 31.75 3.86
2276 2406 3.560636 AGTTTATCCCATCACCGGAAG 57.439 47.619 9.46 0.00 31.75 3.46
2277 2407 5.438698 TTTAGTTTATCCCATCACCGGAA 57.561 39.130 9.46 0.00 31.75 4.30
2278 2408 5.640158 ATTTAGTTTATCCCATCACCGGA 57.360 39.130 9.46 0.00 0.00 5.14
2279 2409 5.938125 CCTATTTAGTTTATCCCATCACCGG 59.062 44.000 0.00 0.00 0.00 5.28
2280 2410 6.649557 GTCCTATTTAGTTTATCCCATCACCG 59.350 42.308 0.00 0.00 0.00 4.94
2299 3304 6.753913 TCCTAGAATCAGCAATTGTCCTAT 57.246 37.500 7.40 0.00 0.00 2.57
2365 3370 6.524734 CATGGCAGGATGTAACAGATACTTA 58.475 40.000 0.00 0.00 39.31 2.24
2390 3464 9.768662 TTCATAATATGATATGATCCCATCACG 57.231 33.333 3.54 0.00 40.85 4.35
2412 3486 9.492973 CCCTCTGAAACAAAACATAAAATTCAT 57.507 29.630 0.00 0.00 0.00 2.57
2413 3487 8.700051 TCCCTCTGAAACAAAACATAAAATTCA 58.300 29.630 0.00 0.00 0.00 2.57
2428 3502 3.507233 TCAATGCATTGTCCCTCTGAAAC 59.493 43.478 32.67 0.00 38.84 2.78
2434 3508 3.294214 AGGAATCAATGCATTGTCCCTC 58.706 45.455 30.99 23.80 34.96 4.30
2440 3514 5.163622 ACGGTTCTAAGGAATCAATGCATTG 60.164 40.000 29.75 29.75 39.10 2.82
2444 3518 4.965119 AACGGTTCTAAGGAATCAATGC 57.035 40.909 0.00 0.00 32.42 3.56
2447 3521 5.472137 CAGGAAAACGGTTCTAAGGAATCAA 59.528 40.000 0.00 0.00 32.42 2.57
2448 3522 5.001232 CAGGAAAACGGTTCTAAGGAATCA 58.999 41.667 0.00 0.00 32.42 2.57
2463 3537 5.468540 AGTATCCTTTTTGCCAGGAAAAC 57.531 39.130 0.00 0.00 43.93 2.43
2480 3554 6.879458 TGGAAAGAAGCTGGTTCTAAAGTATC 59.121 38.462 21.09 12.43 45.44 2.24
2485 3559 6.068010 TGAATGGAAAGAAGCTGGTTCTAAA 58.932 36.000 21.09 8.74 45.44 1.85
2532 3606 1.069823 AGACTGCCATCTTATCCAGCG 59.930 52.381 0.00 0.00 0.00 5.18
2536 3610 4.141846 TGAGTTCAGACTGCCATCTTATCC 60.142 45.833 0.00 0.00 35.88 2.59
2546 3620 5.447010 GCAGAATAACATGAGTTCAGACTGC 60.447 44.000 0.00 0.00 40.09 4.40
2561 3635 4.327680 AGGAAGTGGAAGTGCAGAATAAC 58.672 43.478 0.00 0.00 0.00 1.89
2578 3652 0.609131 AATCACCCGGCACAAGGAAG 60.609 55.000 0.00 0.00 0.00 3.46
2582 3656 2.752354 TCATAAAATCACCCGGCACAAG 59.248 45.455 0.00 0.00 0.00 3.16
2622 3696 5.734311 ACAAACACTAAGTTCACGATTTCG 58.266 37.500 0.00 0.00 40.26 3.46
2638 3712 5.992729 TGCGGTAGAAGAAATAACAAACAC 58.007 37.500 0.00 0.00 0.00 3.32
2639 3713 5.761234 ACTGCGGTAGAAGAAATAACAAACA 59.239 36.000 0.00 0.00 0.00 2.83
2640 3714 6.237313 ACTGCGGTAGAAGAAATAACAAAC 57.763 37.500 0.00 0.00 0.00 2.93
2668 3742 0.175760 TGTAGATCCTGTTCCTGCGC 59.824 55.000 0.00 0.00 0.00 6.09
2779 3853 5.408204 AAGCACTTGCAGCAAATAAAAAC 57.592 34.783 9.65 0.00 45.16 2.43
2785 3879 1.042229 TGGAAGCACTTGCAGCAAAT 58.958 45.000 9.65 0.00 45.16 2.32
2832 3926 3.778629 GTGGGAGGGTAGAATGTTTAGGA 59.221 47.826 0.00 0.00 0.00 2.94
2874 3970 5.411361 CCAAGGTTGTTTATCGAACTCATGA 59.589 40.000 0.00 0.00 39.08 3.07
2902 3998 4.717233 TCTCAAACATGCACAAACTTGT 57.283 36.364 0.00 0.00 43.36 3.16
2953 4049 4.308265 TGCACAAACATCATGTTTCATGG 58.692 39.130 13.09 4.89 46.61 3.66
2986 4082 3.872511 TGCCATGAAATTGCTACAAGG 57.127 42.857 0.00 0.00 35.71 3.61
2993 4089 4.084745 CGCAGAATAATGCCATGAAATTGC 60.085 41.667 0.00 0.00 43.49 3.56
2995 4091 5.045215 CACGCAGAATAATGCCATGAAATT 58.955 37.500 0.00 0.00 43.49 1.82
2996 4092 4.338964 TCACGCAGAATAATGCCATGAAAT 59.661 37.500 0.00 0.00 43.49 2.17
2997 4093 3.693578 TCACGCAGAATAATGCCATGAAA 59.306 39.130 0.00 0.00 43.49 2.69
2999 4095 2.874086 CTCACGCAGAATAATGCCATGA 59.126 45.455 0.00 0.00 43.49 3.07
3001 4097 3.198409 TCTCACGCAGAATAATGCCAT 57.802 42.857 0.00 0.00 43.49 4.40
3003 4099 3.623060 TCTTTCTCACGCAGAATAATGCC 59.377 43.478 0.00 0.00 43.49 4.40
3004 4100 4.784710 GCTCTTTCTCACGCAGAATAATGC 60.785 45.833 0.00 0.00 41.02 3.56
3006 4102 4.507710 TGCTCTTTCTCACGCAGAATAAT 58.492 39.130 0.00 0.00 41.02 1.28
3007 4103 3.925379 TGCTCTTTCTCACGCAGAATAA 58.075 40.909 0.00 0.00 41.02 1.40
3008 4104 3.592898 TGCTCTTTCTCACGCAGAATA 57.407 42.857 0.00 0.00 41.02 1.75
3011 4107 1.202521 TGTTGCTCTTTCTCACGCAGA 60.203 47.619 0.00 0.00 33.48 4.26
3014 4110 0.111089 CGTGTTGCTCTTTCTCACGC 60.111 55.000 0.00 0.00 43.39 5.34
3016 4112 2.158449 CCATCGTGTTGCTCTTTCTCAC 59.842 50.000 0.00 0.00 0.00 3.51
3018 4114 2.417719 ACCATCGTGTTGCTCTTTCTC 58.582 47.619 0.00 0.00 0.00 2.87
3019 4115 2.550830 ACCATCGTGTTGCTCTTTCT 57.449 45.000 0.00 0.00 0.00 2.52
3020 4116 2.548057 TGAACCATCGTGTTGCTCTTTC 59.452 45.455 0.00 0.00 0.00 2.62
3021 4117 2.571212 TGAACCATCGTGTTGCTCTTT 58.429 42.857 0.00 0.00 0.00 2.52
3022 4118 2.254546 TGAACCATCGTGTTGCTCTT 57.745 45.000 0.00 0.00 0.00 2.85
3024 4120 3.435327 TGTATTGAACCATCGTGTTGCTC 59.565 43.478 0.00 0.00 0.00 4.26
3026 4122 3.822594 TGTATTGAACCATCGTGTTGC 57.177 42.857 0.00 0.00 0.00 4.17
3027 4123 5.102020 TGTTGTATTGAACCATCGTGTTG 57.898 39.130 0.00 0.00 0.00 3.33
3028 4124 4.819630 ACTGTTGTATTGAACCATCGTGTT 59.180 37.500 0.00 0.00 0.00 3.32
3029 4125 4.385825 ACTGTTGTATTGAACCATCGTGT 58.614 39.130 0.00 0.00 0.00 4.49
3031 4127 7.681939 AATTACTGTTGTATTGAACCATCGT 57.318 32.000 0.00 0.00 0.00 3.73
3034 4130 9.859427 CATGAAATTACTGTTGTATTGAACCAT 57.141 29.630 0.00 0.00 0.00 3.55
3035 4131 8.303156 CCATGAAATTACTGTTGTATTGAACCA 58.697 33.333 0.00 0.00 0.00 3.67
3037 4133 7.812191 TGCCATGAAATTACTGTTGTATTGAAC 59.188 33.333 0.00 0.00 0.00 3.18
3038 4134 7.890515 TGCCATGAAATTACTGTTGTATTGAA 58.109 30.769 0.00 0.00 0.00 2.69
3039 4135 7.459795 TGCCATGAAATTACTGTTGTATTGA 57.540 32.000 0.00 0.00 0.00 2.57
3040 4136 8.706492 AATGCCATGAAATTACTGTTGTATTG 57.294 30.769 0.00 0.00 0.00 1.90
3042 4138 9.723601 AAAAATGCCATGAAATTACTGTTGTAT 57.276 25.926 0.00 0.00 0.00 2.29
3043 4139 9.202273 GAAAAATGCCATGAAATTACTGTTGTA 57.798 29.630 0.00 0.00 0.00 2.41
3045 4141 8.225107 CAGAAAAATGCCATGAAATTACTGTTG 58.775 33.333 0.00 0.00 0.00 3.33
3046 4142 7.095102 GCAGAAAAATGCCATGAAATTACTGTT 60.095 33.333 0.00 0.00 40.43 3.16
3047 4143 6.369615 GCAGAAAAATGCCATGAAATTACTGT 59.630 34.615 0.00 0.00 40.43 3.55
3048 4144 6.454583 CGCAGAAAAATGCCATGAAATTACTG 60.455 38.462 0.00 6.14 43.49 2.74
3054 4438 3.058450 CACGCAGAAAAATGCCATGAAA 58.942 40.909 0.00 0.00 43.49 2.69
3066 4450 0.392706 TGCTCCTTCTCACGCAGAAA 59.607 50.000 0.00 0.00 40.83 2.52
3073 4457 1.728971 CATCGTGTTGCTCCTTCTCAC 59.271 52.381 0.00 0.00 0.00 3.51
3074 4458 1.338105 CCATCGTGTTGCTCCTTCTCA 60.338 52.381 0.00 0.00 0.00 3.27
3075 4459 1.338200 ACCATCGTGTTGCTCCTTCTC 60.338 52.381 0.00 0.00 0.00 2.87
3080 4464 1.234821 TTGAACCATCGTGTTGCTCC 58.765 50.000 0.00 0.00 0.00 4.70
3148 4532 0.393808 AACTGAACACAGGCCACGTT 60.394 50.000 5.01 4.58 36.12 3.99
3150 4534 0.865769 GTAACTGAACACAGGCCACG 59.134 55.000 5.01 0.00 36.12 4.94
3154 4538 4.377897 AGTAACAGTAACTGAACACAGGC 58.622 43.478 0.00 0.00 36.12 4.85
3155 4539 5.175126 CGAAGTAACAGTAACTGAACACAGG 59.825 44.000 0.00 0.00 36.12 4.00
3156 4540 5.332355 GCGAAGTAACAGTAACTGAACACAG 60.332 44.000 0.00 0.00 35.18 3.66
3157 4541 4.505191 GCGAAGTAACAGTAACTGAACACA 59.495 41.667 0.00 0.00 35.18 3.72
3159 4543 4.940463 AGCGAAGTAACAGTAACTGAACA 58.060 39.130 0.00 0.00 35.18 3.18
3169 4563 3.376540 GGATGAGCTAGCGAAGTAACAG 58.623 50.000 9.55 0.00 0.00 3.16
3178 4572 0.600557 AATCTCGGGATGAGCTAGCG 59.399 55.000 9.55 0.00 44.86 4.26
3191 4585 7.092716 AGAATCCAAAAATCCAAACAATCTCG 58.907 34.615 0.00 0.00 0.00 4.04
3201 4595 6.659242 GTGAGAAGGTAGAATCCAAAAATCCA 59.341 38.462 0.00 0.00 0.00 3.41
3202 4596 6.659242 TGTGAGAAGGTAGAATCCAAAAATCC 59.341 38.462 0.00 0.00 0.00 3.01
3203 4597 7.687941 TGTGAGAAGGTAGAATCCAAAAATC 57.312 36.000 0.00 0.00 0.00 2.17
3204 4598 8.477419 TTTGTGAGAAGGTAGAATCCAAAAAT 57.523 30.769 0.00 0.00 0.00 1.82
3205 4599 7.889873 TTTGTGAGAAGGTAGAATCCAAAAA 57.110 32.000 0.00 0.00 0.00 1.94
3206 4600 8.359642 CAATTTGTGAGAAGGTAGAATCCAAAA 58.640 33.333 0.00 0.00 0.00 2.44
3207 4601 7.723616 TCAATTTGTGAGAAGGTAGAATCCAAA 59.276 33.333 0.00 0.00 0.00 3.28
3208 4602 7.230747 TCAATTTGTGAGAAGGTAGAATCCAA 58.769 34.615 0.00 0.00 0.00 3.53
3209 4603 6.778821 TCAATTTGTGAGAAGGTAGAATCCA 58.221 36.000 0.00 0.00 0.00 3.41
3260 4657 6.447162 ACGGAAGAAAAATCTTCACCATTTC 58.553 36.000 17.54 0.00 45.76 2.17
3283 4703 4.404507 ACGATCACACACTTGCATTAAC 57.595 40.909 0.00 0.00 0.00 2.01
3287 4707 2.771089 AGAACGATCACACACTTGCAT 58.229 42.857 0.00 0.00 0.00 3.96
3293 4713 4.449068 ACATTCTGAAGAACGATCACACAC 59.551 41.667 0.00 0.00 36.80 3.82
3337 4758 7.502060 ACATGCCTATATTATTAGAGCCTGT 57.498 36.000 0.00 0.00 0.00 4.00
3354 4775 5.893255 ACCAAATTGACACATATACATGCCT 59.107 36.000 0.00 0.00 35.39 4.75
3355 4776 5.978919 CACCAAATTGACACATATACATGCC 59.021 40.000 0.00 0.00 35.39 4.40
3356 4777 6.563422 ACACCAAATTGACACATATACATGC 58.437 36.000 0.00 0.00 35.39 4.06
3357 4778 8.984891 AAACACCAAATTGACACATATACATG 57.015 30.769 0.00 0.00 38.21 3.21
3358 4779 8.801299 TGAAACACCAAATTGACACATATACAT 58.199 29.630 0.00 0.00 0.00 2.29
3359 4780 8.171164 TGAAACACCAAATTGACACATATACA 57.829 30.769 0.00 0.00 0.00 2.29
3360 4781 7.273381 GCTGAAACACCAAATTGACACATATAC 59.727 37.037 0.00 0.00 0.00 1.47
3361 4782 7.312154 GCTGAAACACCAAATTGACACATATA 58.688 34.615 0.00 0.00 0.00 0.86
3362 4783 6.158598 GCTGAAACACCAAATTGACACATAT 58.841 36.000 0.00 0.00 0.00 1.78
3363 4784 5.508825 GGCTGAAACACCAAATTGACACATA 60.509 40.000 0.00 0.00 0.00 2.29
3364 4785 4.370917 GCTGAAACACCAAATTGACACAT 58.629 39.130 0.00 0.00 0.00 3.21
3387 4808 6.386654 ACCATAAAACAAGGCTTTATGAACG 58.613 36.000 15.10 4.80 44.29 3.95
3405 4826 7.747155 TTTTCCGTACTGAATCAAACCATAA 57.253 32.000 0.20 0.00 0.00 1.90
3423 4844 8.616076 AGTGCTATATCTTTTCTTCATTTTCCG 58.384 33.333 0.00 0.00 0.00 4.30
3424 4845 9.727627 CAGTGCTATATCTTTTCTTCATTTTCC 57.272 33.333 0.00 0.00 0.00 3.13
3429 4850 8.798859 ACAACAGTGCTATATCTTTTCTTCAT 57.201 30.769 0.00 0.00 0.00 2.57
3430 4851 8.506437 CAACAACAGTGCTATATCTTTTCTTCA 58.494 33.333 0.00 0.00 0.00 3.02
3441 4862 8.511321 CCACTTAAAATCAACAACAGTGCTATA 58.489 33.333 0.00 0.00 30.80 1.31
3471 4892 0.512518 TGTGCAACGAATTCTGCTCG 59.487 50.000 17.57 2.07 42.39 5.03
3558 5149 7.275560 GTCACTGTAGCTTTGTTTTGTGAAAAT 59.724 33.333 0.00 0.00 35.43 1.82
3559 5150 6.584563 GTCACTGTAGCTTTGTTTTGTGAAAA 59.415 34.615 0.00 0.00 35.43 2.29
3568 5160 6.449635 TTTCATTGTCACTGTAGCTTTGTT 57.550 33.333 0.00 0.00 0.00 2.83
3643 5236 3.963374 AGCTAATGTACATCCTGCTCTGA 59.037 43.478 18.41 0.00 0.00 3.27
3654 5247 6.055588 GCTTGGGAATAAGAGCTAATGTACA 58.944 40.000 0.00 0.00 32.54 2.90
3715 5308 3.503748 CCAGATGTGAGAGGTGGTTTTTC 59.496 47.826 0.00 0.00 0.00 2.29
3858 5459 0.238553 TGAAGCTCACGTCTGACTCG 59.761 55.000 6.21 0.00 0.00 4.18
3998 5600 0.463474 GAGACCATGAGCTCAAGGCC 60.463 60.000 32.56 24.63 43.05 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.