Multiple sequence alignment - TraesCS7A01G276900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G276900 chr7A 100.000 2412 0 0 1 2412 290278076 290280487 0.000000e+00 4455.0
1 TraesCS7A01G276900 chr7A 100.000 194 0 0 2705 2898 290280780 290280973 2.750000e-95 359.0
2 TraesCS7A01G276900 chr7D 95.164 517 24 1 737 1252 265253374 265253890 0.000000e+00 815.0
3 TraesCS7A01G276900 chr7D 86.994 692 40 18 1570 2251 265253898 265254549 0.000000e+00 734.0
4 TraesCS7A01G276900 chr7D 88.323 334 32 1 216 549 265252551 265252877 7.530000e-106 394.0
5 TraesCS7A01G276900 chr7D 88.542 96 3 4 653 740 265252968 265253063 3.050000e-20 110.0
6 TraesCS7A01G276900 chr7B 88.199 644 39 22 1606 2235 245662977 245663597 0.000000e+00 734.0
7 TraesCS7A01G276900 chr7B 89.575 518 27 18 1046 1543 245660754 245661264 1.470000e-177 632.0
8 TraesCS7A01G276900 chr7B 90.885 384 20 8 635 1009 245660376 245660753 4.310000e-138 501.0
9 TraesCS7A01G276900 chr5D 83.951 567 80 6 1 559 476312869 476313432 1.530000e-147 532.0
10 TraesCS7A01G276900 chr1D 84.012 344 27 16 899 1224 24539276 24539609 3.630000e-79 305.0
11 TraesCS7A01G276900 chr1A 83.285 347 27 21 899 1224 25545350 25545686 1.020000e-74 291.0
12 TraesCS7A01G276900 chr1A 83.784 222 32 3 335 555 583331681 583331899 1.050000e-49 207.0
13 TraesCS7A01G276900 chr1B 88.412 233 18 4 991 1223 39854142 39854365 3.680000e-69 272.0
14 TraesCS7A01G276900 chr3A 77.922 154 24 6 2729 2875 607083885 607084035 1.430000e-13 87.9
15 TraesCS7A01G276900 chr3A 75.000 148 33 4 2729 2873 743862896 743862750 6.700000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G276900 chr7A 290278076 290280973 2897 False 2407.000000 4455 100.00000 1 2898 2 chr7A.!!$F1 2897
1 TraesCS7A01G276900 chr7D 265252551 265254549 1998 False 513.250000 815 89.75575 216 2251 4 chr7D.!!$F1 2035
2 TraesCS7A01G276900 chr7B 245660376 245663597 3221 False 622.333333 734 89.55300 635 2235 3 chr7B.!!$F1 1600
3 TraesCS7A01G276900 chr5D 476312869 476313432 563 False 532.000000 532 83.95100 1 559 1 chr5D.!!$F1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
631 654 0.030638 CAACCCACTGGCAAGTTTCG 59.969 55.0 0.0 0.0 32.98 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2307 4356 0.030101 CCGAACCACGCAAAACATGT 59.97 50.0 0.0 0.0 41.07 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 8.722480 TGATCTCCAGTCATGTTTTACTTATG 57.278 34.615 0.00 0.00 0.00 1.90
59 60 9.871238 GTCATGTTTTACTTATGGTCTCTAGAA 57.129 33.333 0.00 0.00 0.00 2.10
108 111 6.588719 TTTTAGGCATGCAATAAGTTCACT 57.411 33.333 21.36 5.52 0.00 3.41
117 120 6.554334 TGCAATAAGTTCACTTTCTGGTAC 57.446 37.500 0.00 0.00 37.40 3.34
119 122 6.204688 TGCAATAAGTTCACTTTCTGGTACTG 59.795 38.462 0.00 0.00 37.40 2.74
132 135 1.628340 TGGTACTGGGGAGTTGATGTG 59.372 52.381 0.00 0.00 0.00 3.21
140 143 3.165071 GGGGAGTTGATGTGTCCATTTT 58.835 45.455 0.00 0.00 31.31 1.82
156 160 7.698130 GTGTCCATTTTCGAAGAATCCATTTAG 59.302 37.037 0.00 0.00 45.90 1.85
161 165 4.487714 TCGAAGAATCCATTTAGTGCCT 57.512 40.909 0.00 0.00 0.00 4.75
165 169 3.285484 AGAATCCATTTAGTGCCTGCAG 58.715 45.455 6.78 6.78 0.00 4.41
177 181 1.202794 TGCCTGCAGTTCACTCATTCA 60.203 47.619 13.81 0.00 0.00 2.57
180 184 2.551721 CCTGCAGTTCACTCATTCACCT 60.552 50.000 13.81 0.00 0.00 4.00
188 192 4.672587 TCACTCATTCACCTACATAGCC 57.327 45.455 0.00 0.00 0.00 3.93
211 218 1.066071 TGTGAATTGGCGTCCCGAATA 60.066 47.619 0.00 0.00 0.00 1.75
234 241 9.799106 AATAACCCAACCTCTATCAATCTATTG 57.201 33.333 0.00 0.00 39.10 1.90
239 246 7.419518 CCCAACCTCTATCAATCTATTGTCACT 60.420 40.741 2.80 0.00 38.84 3.41
247 254 6.857437 TCAATCTATTGTCACTCTTCCTGA 57.143 37.500 2.80 0.00 38.84 3.86
253 260 2.123589 TGTCACTCTTCCTGAACCCAA 58.876 47.619 0.00 0.00 0.00 4.12
284 291 7.270047 CCTAATTCATGGCAATCAACATTTCT 58.730 34.615 0.00 0.00 0.00 2.52
288 295 5.957798 TCATGGCAATCAACATTTCTTCTC 58.042 37.500 0.00 0.00 0.00 2.87
294 301 5.063944 GCAATCAACATTTCTTCTCTAGCGA 59.936 40.000 0.00 0.00 0.00 4.93
312 319 2.607187 CGAAGCATAGACGTTGTCCTT 58.393 47.619 0.00 0.00 32.18 3.36
327 334 2.103432 TGTCCTTGGAAGTAACTCGCAA 59.897 45.455 0.00 0.00 0.00 4.85
431 438 0.761802 TGTGTGTCATGTAGTGGCCA 59.238 50.000 0.00 0.00 0.00 5.36
441 448 1.630369 TGTAGTGGCCAAGCTCATCTT 59.370 47.619 7.24 0.00 34.78 2.40
442 449 2.040278 TGTAGTGGCCAAGCTCATCTTT 59.960 45.455 7.24 0.00 31.27 2.52
446 453 2.297033 GTGGCCAAGCTCATCTTTTTGA 59.703 45.455 7.24 0.00 31.27 2.69
494 502 2.084013 GGTGAATACCGCGGTCAAC 58.916 57.895 38.01 25.99 37.19 3.18
503 511 3.641986 GCGGTCAACGTCGGCAAA 61.642 61.111 0.00 0.00 46.52 3.68
526 534 4.726825 ACATGGGAAGGAGGATAAGCTAAA 59.273 41.667 0.00 0.00 0.00 1.85
533 541 6.987404 GGAAGGAGGATAAGCTAAAACACTAG 59.013 42.308 0.00 0.00 0.00 2.57
534 542 7.147707 GGAAGGAGGATAAGCTAAAACACTAGA 60.148 40.741 0.00 0.00 0.00 2.43
549 557 3.243336 CACTAGAGTGCGGTGTAGAAAC 58.757 50.000 0.00 0.00 39.39 2.78
555 563 0.320374 TGCGGTGTAGAAACAGAGGG 59.680 55.000 0.00 0.00 35.91 4.30
556 564 0.320697 GCGGTGTAGAAACAGAGGGT 59.679 55.000 0.00 0.00 35.91 4.34
594 617 9.952030 CAATACTTTTTAAATTATGGGGGTGTT 57.048 29.630 0.00 0.00 0.00 3.32
619 642 3.742983 TTTTTCCGTTGCAACCCAC 57.257 47.368 23.42 0.00 0.00 4.61
620 643 1.187087 TTTTTCCGTTGCAACCCACT 58.813 45.000 23.42 0.00 0.00 4.00
621 644 0.457851 TTTTCCGTTGCAACCCACTG 59.542 50.000 23.42 9.09 0.00 3.66
623 646 3.977244 CCGTTGCAACCCACTGGC 61.977 66.667 23.42 0.00 33.59 4.85
624 647 3.215568 CGTTGCAACCCACTGGCA 61.216 61.111 23.42 0.00 35.41 4.92
625 648 2.780094 CGTTGCAACCCACTGGCAA 61.780 57.895 23.42 0.00 44.50 4.52
626 649 1.067916 GTTGCAACCCACTGGCAAG 59.932 57.895 19.15 0.00 46.95 4.01
627 650 1.381056 TTGCAACCCACTGGCAAGT 60.381 52.632 0.00 0.00 42.12 3.16
628 651 0.975040 TTGCAACCCACTGGCAAGTT 60.975 50.000 0.00 0.00 42.12 2.66
629 652 0.975040 TGCAACCCACTGGCAAGTTT 60.975 50.000 0.00 0.00 32.98 2.66
630 653 0.249447 GCAACCCACTGGCAAGTTTC 60.249 55.000 0.00 0.00 32.98 2.78
631 654 0.030638 CAACCCACTGGCAAGTTTCG 59.969 55.000 0.00 0.00 32.98 3.46
632 655 0.395173 AACCCACTGGCAAGTTTCGT 60.395 50.000 0.00 0.00 32.98 3.85
633 656 0.470766 ACCCACTGGCAAGTTTCGTA 59.529 50.000 0.00 0.00 32.98 3.43
634 657 0.872388 CCCACTGGCAAGTTTCGTAC 59.128 55.000 0.00 0.00 32.98 3.67
635 658 1.542547 CCCACTGGCAAGTTTCGTACT 60.543 52.381 0.00 0.00 39.32 2.73
636 659 2.289195 CCCACTGGCAAGTTTCGTACTA 60.289 50.000 0.00 0.00 35.54 1.82
637 660 2.993899 CCACTGGCAAGTTTCGTACTAG 59.006 50.000 0.00 0.00 35.54 2.57
638 661 3.554337 CCACTGGCAAGTTTCGTACTAGT 60.554 47.826 0.00 0.00 35.54 2.57
639 662 3.673809 CACTGGCAAGTTTCGTACTAGTC 59.326 47.826 0.00 0.00 35.54 2.59
640 663 3.251571 CTGGCAAGTTTCGTACTAGTCC 58.748 50.000 0.00 0.00 35.54 3.85
641 664 2.028748 TGGCAAGTTTCGTACTAGTCCC 60.029 50.000 0.00 0.00 35.54 4.46
642 665 2.233186 GGCAAGTTTCGTACTAGTCCCT 59.767 50.000 0.00 0.00 35.54 4.20
643 666 3.445096 GGCAAGTTTCGTACTAGTCCCTA 59.555 47.826 0.00 0.00 35.54 3.53
644 667 4.082026 GGCAAGTTTCGTACTAGTCCCTAA 60.082 45.833 0.00 0.00 35.54 2.69
673 706 8.757164 AAATCCGTGAAAATGAAAACTTATCC 57.243 30.769 0.00 0.00 0.00 2.59
674 707 7.703058 ATCCGTGAAAATGAAAACTTATCCT 57.297 32.000 0.00 0.00 0.00 3.24
676 709 6.940298 TCCGTGAAAATGAAAACTTATCCTCT 59.060 34.615 0.00 0.00 0.00 3.69
677 710 7.447238 TCCGTGAAAATGAAAACTTATCCTCTT 59.553 33.333 0.00 0.00 0.00 2.85
678 711 8.726988 CCGTGAAAATGAAAACTTATCCTCTTA 58.273 33.333 0.00 0.00 0.00 2.10
684 717 7.954788 ATGAAAACTTATCCTCTTATCTCGC 57.045 36.000 0.00 0.00 0.00 5.03
685 718 6.281405 TGAAAACTTATCCTCTTATCTCGCC 58.719 40.000 0.00 0.00 0.00 5.54
686 719 4.506886 AACTTATCCTCTTATCTCGCCG 57.493 45.455 0.00 0.00 0.00 6.46
688 721 1.174783 TATCCTCTTATCTCGCCGGC 58.825 55.000 19.07 19.07 0.00 6.13
689 722 1.536943 ATCCTCTTATCTCGCCGGCC 61.537 60.000 23.46 2.84 0.00 6.13
690 723 2.049985 CTCTTATCTCGCCGGCCG 60.050 66.667 23.46 21.04 38.61 6.13
752 1099 1.068753 CGCTCCGAATCTCAGGCAT 59.931 57.895 0.00 0.00 0.00 4.40
976 1331 1.298713 GTGAGCGCACGATCGATCT 60.299 57.895 24.34 12.07 44.24 2.75
1226 1581 0.174389 AGCGACATCTACAGGTGCAG 59.826 55.000 0.00 0.00 0.00 4.41
1228 1583 1.134367 GCGACATCTACAGGTGCAGTA 59.866 52.381 0.00 0.00 0.00 2.74
1272 1627 6.051074 CAGTCTCATCATGGTGCTGTATAAA 58.949 40.000 0.00 0.00 0.00 1.40
1283 1638 4.335594 GGTGCTGTATAAATTCAGTCCACC 59.664 45.833 9.14 9.14 37.52 4.61
1318 1673 3.989698 ATCGACCTGCTTGGCGTCG 62.990 63.158 11.57 11.57 40.22 5.12
1329 1684 2.139888 TTGGCGTCGCGGTACAGTTA 62.140 55.000 11.75 0.00 0.00 2.24
1330 1685 1.870901 GGCGTCGCGGTACAGTTAG 60.871 63.158 11.75 0.00 0.00 2.34
1331 1686 2.502965 GCGTCGCGGTACAGTTAGC 61.503 63.158 6.13 0.00 0.00 3.09
1332 1687 1.136147 CGTCGCGGTACAGTTAGCT 59.864 57.895 6.13 0.00 0.00 3.32
1333 1688 0.860618 CGTCGCGGTACAGTTAGCTC 60.861 60.000 6.13 0.00 0.00 4.09
1335 1690 0.169672 TCGCGGTACAGTTAGCTCAC 59.830 55.000 6.13 0.00 0.00 3.51
1337 1692 0.245539 GCGGTACAGTTAGCTCACCA 59.754 55.000 0.00 0.00 30.78 4.17
1338 1693 1.134788 GCGGTACAGTTAGCTCACCAT 60.135 52.381 0.00 0.00 30.78 3.55
1339 1694 2.810650 CGGTACAGTTAGCTCACCATC 58.189 52.381 0.00 0.00 30.78 3.51
1340 1695 2.481449 CGGTACAGTTAGCTCACCATCC 60.481 54.545 0.00 0.00 30.78 3.51
1341 1696 2.481449 GGTACAGTTAGCTCACCATCCG 60.481 54.545 0.00 0.00 30.78 4.18
1342 1697 1.267121 ACAGTTAGCTCACCATCCGT 58.733 50.000 0.00 0.00 0.00 4.69
1344 1699 2.271800 CAGTTAGCTCACCATCCGTTC 58.728 52.381 0.00 0.00 0.00 3.95
1345 1700 1.207329 AGTTAGCTCACCATCCGTTCC 59.793 52.381 0.00 0.00 0.00 3.62
1346 1701 0.174845 TTAGCTCACCATCCGTTCCG 59.825 55.000 0.00 0.00 0.00 4.30
1347 1702 0.968901 TAGCTCACCATCCGTTCCGT 60.969 55.000 0.00 0.00 0.00 4.69
1348 1703 0.968901 AGCTCACCATCCGTTCCGTA 60.969 55.000 0.00 0.00 0.00 4.02
1349 1704 0.104304 GCTCACCATCCGTTCCGTAT 59.896 55.000 0.00 0.00 0.00 3.06
1350 1705 1.868519 GCTCACCATCCGTTCCGTATC 60.869 57.143 0.00 0.00 0.00 2.24
1351 1706 1.407618 CTCACCATCCGTTCCGTATCA 59.592 52.381 0.00 0.00 0.00 2.15
1352 1707 1.407618 TCACCATCCGTTCCGTATCAG 59.592 52.381 0.00 0.00 0.00 2.90
1358 1713 3.710326 TCCGTTCCGTATCAGAGAATG 57.290 47.619 0.00 0.00 0.00 2.67
1370 1725 0.178767 AGAGAATGCTGCCATGCGTA 59.821 50.000 0.00 0.00 31.80 4.42
1391 1746 1.197721 CGTTCACAGTGATTCCTTGCC 59.802 52.381 3.45 0.00 0.00 4.52
1462 1842 4.101119 CCCTCGACCTGTAATTAGTCCATT 59.899 45.833 0.00 0.00 0.00 3.16
1463 1843 5.303589 CCCTCGACCTGTAATTAGTCCATTA 59.696 44.000 0.00 0.00 0.00 1.90
1464 1844 6.014499 CCCTCGACCTGTAATTAGTCCATTAT 60.014 42.308 0.00 0.00 0.00 1.28
1465 1845 7.177921 CCCTCGACCTGTAATTAGTCCATTATA 59.822 40.741 0.00 0.00 0.00 0.98
1466 1846 8.750298 CCTCGACCTGTAATTAGTCCATTATAT 58.250 37.037 0.00 0.00 0.00 0.86
1500 1880 5.421277 TGCATTTCCAGAGCCAAAATATTG 58.579 37.500 0.00 0.00 36.25 1.90
1543 1923 1.108776 GTATGACTGCGGTGGGAGTA 58.891 55.000 0.80 0.00 45.69 2.59
1545 1925 0.614979 ATGACTGCGGTGGGAGTAGT 60.615 55.000 0.80 0.00 45.69 2.73
1546 1926 0.830444 TGACTGCGGTGGGAGTAGTT 60.830 55.000 0.80 0.00 45.69 2.24
1547 1927 0.320697 GACTGCGGTGGGAGTAGTTT 59.679 55.000 0.80 0.00 45.69 2.66
1548 1928 0.034896 ACTGCGGTGGGAGTAGTTTG 59.965 55.000 0.00 0.00 43.69 2.93
1549 1929 0.673644 CTGCGGTGGGAGTAGTTTGG 60.674 60.000 0.00 0.00 0.00 3.28
1550 1930 2.038837 GCGGTGGGAGTAGTTTGGC 61.039 63.158 0.00 0.00 0.00 4.52
1551 1931 1.373435 CGGTGGGAGTAGTTTGGCA 59.627 57.895 0.00 0.00 0.00 4.92
1552 1932 0.035439 CGGTGGGAGTAGTTTGGCAT 60.035 55.000 0.00 0.00 0.00 4.40
1553 1933 1.208535 CGGTGGGAGTAGTTTGGCATA 59.791 52.381 0.00 0.00 0.00 3.14
1556 1936 3.532542 GTGGGAGTAGTTTGGCATAGAC 58.467 50.000 0.00 0.00 0.00 2.59
1557 1937 3.197983 GTGGGAGTAGTTTGGCATAGACT 59.802 47.826 0.00 0.00 0.00 3.24
1558 1938 4.404715 GTGGGAGTAGTTTGGCATAGACTA 59.595 45.833 0.00 0.00 0.00 2.59
1559 1939 5.027460 TGGGAGTAGTTTGGCATAGACTAA 58.973 41.667 7.27 0.00 0.00 2.24
1561 1941 6.157994 TGGGAGTAGTTTGGCATAGACTAAAT 59.842 38.462 7.27 1.65 0.00 1.40
1562 1942 6.706716 GGGAGTAGTTTGGCATAGACTAAATC 59.293 42.308 7.27 8.33 0.00 2.17
1563 1943 7.272978 GGAGTAGTTTGGCATAGACTAAATCA 58.727 38.462 7.27 0.00 0.00 2.57
1564 1944 7.439655 GGAGTAGTTTGGCATAGACTAAATCAG 59.560 40.741 7.27 0.00 0.00 2.90
1565 1945 8.079211 AGTAGTTTGGCATAGACTAAATCAGA 57.921 34.615 7.27 0.00 0.00 3.27
1566 1946 8.540388 AGTAGTTTGGCATAGACTAAATCAGAA 58.460 33.333 7.27 0.00 0.00 3.02
1567 1947 9.331282 GTAGTTTGGCATAGACTAAATCAGAAT 57.669 33.333 7.27 0.00 0.00 2.40
1604 2920 7.173562 TCGTGTAATTTACCAAGCAGTGTAATT 59.826 33.333 4.17 0.00 0.00 1.40
1633 3663 4.071961 TCTTGTCAGCACAGTGTACAAT 57.928 40.909 14.67 0.00 32.71 2.71
1635 3665 3.751479 TGTCAGCACAGTGTACAATCT 57.249 42.857 0.00 0.00 0.00 2.40
1659 3689 5.073311 TGAGTGGATCAACAGTAAGCTAC 57.927 43.478 2.34 0.00 34.02 3.58
1728 3759 3.185880 AGCCAAGGGTGTAGTAGAAGA 57.814 47.619 0.00 0.00 0.00 2.87
1735 3766 2.622470 GGGTGTAGTAGAAGATCCGTCC 59.378 54.545 0.00 0.00 0.00 4.79
1737 3768 3.285484 GTGTAGTAGAAGATCCGTCCCA 58.715 50.000 0.00 0.00 0.00 4.37
1810 3841 1.774110 TCCCTCAGATCTCTGCTGTC 58.226 55.000 2.21 0.00 43.46 3.51
1846 3877 3.190849 CCTCATGTCGCGGTGCAG 61.191 66.667 6.13 3.46 0.00 4.41
1898 3929 1.093159 GAGGCACAGAAAGGCATGAG 58.907 55.000 0.00 0.00 0.00 2.90
1899 3930 0.964358 AGGCACAGAAAGGCATGAGC 60.964 55.000 0.00 0.00 41.10 4.26
1900 3931 0.964358 GGCACAGAAAGGCATGAGCT 60.964 55.000 0.00 0.00 41.70 4.09
1901 3932 0.886563 GCACAGAAAGGCATGAGCTT 59.113 50.000 0.00 0.00 41.70 3.74
1902 3933 1.402456 GCACAGAAAGGCATGAGCTTG 60.402 52.381 0.00 0.00 41.70 4.01
1903 3934 2.156917 CACAGAAAGGCATGAGCTTGA 58.843 47.619 0.00 0.00 41.70 3.02
1916 3947 3.748083 TGAGCTTGAGCAGAACTTCATT 58.252 40.909 5.70 0.00 45.16 2.57
1919 3953 3.255149 AGCTTGAGCAGAACTTCATTTGG 59.745 43.478 5.70 0.00 45.16 3.28
1929 3963 2.250924 ACTTCATTTGGGAAAGCCTGG 58.749 47.619 0.00 0.00 0.00 4.45
1950 3984 2.190538 CCAAAATGCCCCCTCAGAATT 58.809 47.619 0.00 0.00 0.00 2.17
1975 4009 4.314121 AGTTGAGCTGATTTCTGTGTCTC 58.686 43.478 0.00 0.00 0.00 3.36
1976 4010 4.060900 GTTGAGCTGATTTCTGTGTCTCA 58.939 43.478 0.00 0.00 0.00 3.27
1989 4029 5.340803 TCTGTGTCTCATCTATAAACGTGC 58.659 41.667 0.00 0.00 0.00 5.34
2000 4040 6.403333 TCTATAAACGTGCTGTTGATTGTC 57.597 37.500 0.00 0.00 40.84 3.18
2001 4041 6.163476 TCTATAAACGTGCTGTTGATTGTCT 58.837 36.000 0.00 0.00 40.84 3.41
2003 4043 3.338818 AACGTGCTGTTGATTGTCTTG 57.661 42.857 0.00 0.00 40.00 3.02
2010 4050 5.237344 GTGCTGTTGATTGTCTTGTTACTCT 59.763 40.000 0.00 0.00 0.00 3.24
2018 4058 2.626266 TGTCTTGTTACTCTTCGGCTGA 59.374 45.455 0.00 0.00 0.00 4.26
2039 4079 0.994263 GCTGAAATTGCCGCAATCAC 59.006 50.000 18.76 15.09 32.43 3.06
2055 4095 5.448496 CGCAATCACGGGAAAAAGATTGATA 60.448 40.000 15.74 0.00 46.27 2.15
2060 4100 4.396166 CACGGGAAAAAGATTGATAGTGCT 59.604 41.667 0.00 0.00 0.00 4.40
2061 4101 5.584649 CACGGGAAAAAGATTGATAGTGCTA 59.415 40.000 0.00 0.00 0.00 3.49
2062 4102 5.585047 ACGGGAAAAAGATTGATAGTGCTAC 59.415 40.000 0.00 0.00 0.00 3.58
2063 4103 5.276868 CGGGAAAAAGATTGATAGTGCTACG 60.277 44.000 0.00 0.00 0.00 3.51
2064 4104 5.585047 GGGAAAAAGATTGATAGTGCTACGT 59.415 40.000 0.00 0.00 0.00 3.57
2065 4105 6.759827 GGGAAAAAGATTGATAGTGCTACGTA 59.240 38.462 0.00 0.00 0.00 3.57
2066 4106 7.279313 GGGAAAAAGATTGATAGTGCTACGTAA 59.721 37.037 0.00 0.00 0.00 3.18
2153 4193 8.723942 TCTGAATATTTCTAGAGAAAAGGCAC 57.276 34.615 8.70 2.08 45.81 5.01
2159 4199 4.478206 TCTAGAGAAAAGGCACTCCATG 57.522 45.455 0.00 0.00 38.49 3.66
2206 4255 1.860950 CACCATATCGAGCTGAAACGG 59.139 52.381 0.00 0.00 0.00 4.44
2213 4262 1.344942 CGAGCTGAAACGGAAGGACG 61.345 60.000 0.00 0.00 40.31 4.79
2216 4265 0.391263 GCTGAAACGGAAGGACGGAT 60.391 55.000 0.00 0.00 38.39 4.18
2224 4273 1.335132 GGAAGGACGGATACCTGGCA 61.335 60.000 0.00 0.00 37.85 4.92
2243 4292 2.289547 GCAGCTAAACAACAAGAACGGA 59.710 45.455 0.00 0.00 0.00 4.69
2251 4300 2.429250 ACAACAAGAACGGAAAAAGGGG 59.571 45.455 0.00 0.00 0.00 4.79
2252 4301 1.037493 ACAAGAACGGAAAAAGGGGC 58.963 50.000 0.00 0.00 0.00 5.80
2253 4302 0.039527 CAAGAACGGAAAAAGGGGCG 60.040 55.000 0.00 0.00 0.00 6.13
2254 4303 0.466739 AAGAACGGAAAAAGGGGCGT 60.467 50.000 0.00 0.00 0.00 5.68
2255 4304 0.887836 AGAACGGAAAAAGGGGCGTC 60.888 55.000 0.00 0.00 0.00 5.19
2256 4305 0.887836 GAACGGAAAAAGGGGCGTCT 60.888 55.000 0.00 0.00 0.00 4.18
2257 4306 0.887836 AACGGAAAAAGGGGCGTCTC 60.888 55.000 0.00 0.00 0.00 3.36
2258 4307 2.038837 CGGAAAAAGGGGCGTCTCC 61.039 63.158 0.00 0.00 0.00 3.71
2259 4308 1.074248 GGAAAAAGGGGCGTCTCCA 59.926 57.895 0.00 0.00 36.21 3.86
2260 4309 0.538746 GGAAAAAGGGGCGTCTCCAA 60.539 55.000 0.00 0.00 36.21 3.53
2261 4310 0.596577 GAAAAAGGGGCGTCTCCAAC 59.403 55.000 0.00 0.00 36.21 3.77
2269 4318 3.474806 CGTCTCCAACGCCATCAC 58.525 61.111 0.00 0.00 45.76 3.06
2270 4319 1.374125 CGTCTCCAACGCCATCACA 60.374 57.895 0.00 0.00 45.76 3.58
2271 4320 0.948623 CGTCTCCAACGCCATCACAA 60.949 55.000 0.00 0.00 45.76 3.33
2272 4321 1.234821 GTCTCCAACGCCATCACAAA 58.765 50.000 0.00 0.00 0.00 2.83
2273 4322 1.197721 GTCTCCAACGCCATCACAAAG 59.802 52.381 0.00 0.00 0.00 2.77
2274 4323 0.109597 CTCCAACGCCATCACAAAGC 60.110 55.000 0.00 0.00 0.00 3.51
2275 4324 1.080569 CCAACGCCATCACAAAGCC 60.081 57.895 0.00 0.00 0.00 4.35
2276 4325 1.526575 CCAACGCCATCACAAAGCCT 61.527 55.000 0.00 0.00 0.00 4.58
2277 4326 0.109597 CAACGCCATCACAAAGCCTC 60.110 55.000 0.00 0.00 0.00 4.70
2278 4327 1.244019 AACGCCATCACAAAGCCTCC 61.244 55.000 0.00 0.00 0.00 4.30
2279 4328 2.409870 CGCCATCACAAAGCCTCCC 61.410 63.158 0.00 0.00 0.00 4.30
2280 4329 1.304381 GCCATCACAAAGCCTCCCA 60.304 57.895 0.00 0.00 0.00 4.37
2281 4330 1.598701 GCCATCACAAAGCCTCCCAC 61.599 60.000 0.00 0.00 0.00 4.61
2282 4331 0.251297 CCATCACAAAGCCTCCCACA 60.251 55.000 0.00 0.00 0.00 4.17
2283 4332 1.617804 CCATCACAAAGCCTCCCACAT 60.618 52.381 0.00 0.00 0.00 3.21
2284 4333 2.357050 CCATCACAAAGCCTCCCACATA 60.357 50.000 0.00 0.00 0.00 2.29
2285 4334 2.489938 TCACAAAGCCTCCCACATAC 57.510 50.000 0.00 0.00 0.00 2.39
2286 4335 1.086696 CACAAAGCCTCCCACATACG 58.913 55.000 0.00 0.00 0.00 3.06
2287 4336 0.981183 ACAAAGCCTCCCACATACGA 59.019 50.000 0.00 0.00 0.00 3.43
2288 4337 1.559682 ACAAAGCCTCCCACATACGAT 59.440 47.619 0.00 0.00 0.00 3.73
2289 4338 2.026262 ACAAAGCCTCCCACATACGATT 60.026 45.455 0.00 0.00 0.00 3.34
2290 4339 2.614057 CAAAGCCTCCCACATACGATTC 59.386 50.000 0.00 0.00 0.00 2.52
2291 4340 0.389391 AGCCTCCCACATACGATTCG 59.611 55.000 4.14 4.14 0.00 3.34
2292 4341 0.600255 GCCTCCCACATACGATTCGG 60.600 60.000 11.29 0.00 0.00 4.30
2293 4342 1.037493 CCTCCCACATACGATTCGGA 58.963 55.000 11.29 1.21 0.00 4.55
2294 4343 1.269621 CCTCCCACATACGATTCGGAC 60.270 57.143 11.29 0.00 0.00 4.79
2295 4344 0.748450 TCCCACATACGATTCGGACC 59.252 55.000 11.29 0.00 0.00 4.46
2296 4345 0.462375 CCCACATACGATTCGGACCA 59.538 55.000 11.29 0.00 0.00 4.02
2297 4346 1.567504 CCACATACGATTCGGACCAC 58.432 55.000 11.29 0.00 0.00 4.16
2298 4347 1.197055 CACATACGATTCGGACCACG 58.803 55.000 11.29 0.00 46.11 4.94
2299 4348 0.526954 ACATACGATTCGGACCACGC 60.527 55.000 11.29 0.00 43.86 5.34
2300 4349 1.298863 ATACGATTCGGACCACGCG 60.299 57.895 3.53 3.53 43.86 6.01
2301 4350 2.672908 ATACGATTCGGACCACGCGG 62.673 60.000 12.47 0.00 43.86 6.46
2310 4359 3.305314 ACCACGCGGTATGGACAT 58.695 55.556 19.89 0.00 46.71 3.06
2311 4360 1.153449 ACCACGCGGTATGGACATG 60.153 57.895 19.89 0.87 46.71 3.21
2312 4361 1.153449 CCACGCGGTATGGACATGT 60.153 57.895 12.47 0.00 39.87 3.21
2313 4362 0.742990 CCACGCGGTATGGACATGTT 60.743 55.000 12.47 0.00 39.87 2.71
2314 4363 1.083489 CACGCGGTATGGACATGTTT 58.917 50.000 12.47 0.00 0.00 2.83
2315 4364 1.466950 CACGCGGTATGGACATGTTTT 59.533 47.619 12.47 0.00 0.00 2.43
2316 4365 1.466950 ACGCGGTATGGACATGTTTTG 59.533 47.619 12.47 0.00 0.00 2.44
2317 4366 1.793714 CGCGGTATGGACATGTTTTGC 60.794 52.381 0.00 0.00 0.00 3.68
2318 4367 1.793714 GCGGTATGGACATGTTTTGCG 60.794 52.381 0.00 0.00 0.00 4.85
2319 4368 1.466950 CGGTATGGACATGTTTTGCGT 59.533 47.619 0.00 0.00 0.00 5.24
2320 4369 2.727607 CGGTATGGACATGTTTTGCGTG 60.728 50.000 0.00 0.00 39.90 5.34
2321 4370 2.415357 GGTATGGACATGTTTTGCGTGG 60.415 50.000 0.00 0.00 38.39 4.94
2322 4371 1.327303 ATGGACATGTTTTGCGTGGT 58.673 45.000 0.00 0.00 38.39 4.16
2323 4372 1.107114 TGGACATGTTTTGCGTGGTT 58.893 45.000 0.00 0.00 38.39 3.67
2324 4373 1.066303 TGGACATGTTTTGCGTGGTTC 59.934 47.619 0.00 0.00 38.39 3.62
2325 4374 1.394697 GACATGTTTTGCGTGGTTCG 58.605 50.000 0.00 0.00 38.39 3.95
2326 4375 0.030101 ACATGTTTTGCGTGGTTCGG 59.970 50.000 0.00 0.00 38.39 4.30
2327 4376 0.309302 CATGTTTTGCGTGGTTCGGA 59.691 50.000 0.00 0.00 40.26 4.55
2328 4377 1.068610 CATGTTTTGCGTGGTTCGGAT 60.069 47.619 0.00 0.00 39.99 4.18
2329 4378 0.309302 TGTTTTGCGTGGTTCGGATG 59.691 50.000 0.00 0.00 39.99 3.51
2330 4379 0.309612 GTTTTGCGTGGTTCGGATGT 59.690 50.000 0.00 0.00 39.99 3.06
2331 4380 0.309302 TTTTGCGTGGTTCGGATGTG 59.691 50.000 0.00 0.00 39.99 3.21
2332 4381 0.816018 TTTGCGTGGTTCGGATGTGT 60.816 50.000 0.00 0.00 39.99 3.72
2333 4382 0.816018 TTGCGTGGTTCGGATGTGTT 60.816 50.000 0.00 0.00 39.99 3.32
2334 4383 1.225376 TGCGTGGTTCGGATGTGTTC 61.225 55.000 0.00 0.00 40.26 3.18
2335 4384 0.949105 GCGTGGTTCGGATGTGTTCT 60.949 55.000 0.00 0.00 40.26 3.01
2336 4385 1.670674 GCGTGGTTCGGATGTGTTCTA 60.671 52.381 0.00 0.00 40.26 2.10
2337 4386 2.888594 CGTGGTTCGGATGTGTTCTAT 58.111 47.619 0.00 0.00 35.71 1.98
2338 4387 2.858344 CGTGGTTCGGATGTGTTCTATC 59.142 50.000 0.00 0.00 35.71 2.08
2339 4388 2.858344 GTGGTTCGGATGTGTTCTATCG 59.142 50.000 0.00 0.00 0.00 2.92
2340 4389 2.494471 TGGTTCGGATGTGTTCTATCGT 59.506 45.455 0.00 0.00 0.00 3.73
2341 4390 3.114065 GGTTCGGATGTGTTCTATCGTC 58.886 50.000 0.00 0.00 0.00 4.20
2342 4391 3.181489 GGTTCGGATGTGTTCTATCGTCT 60.181 47.826 0.00 0.00 0.00 4.18
2343 4392 4.036027 GGTTCGGATGTGTTCTATCGTCTA 59.964 45.833 0.00 0.00 0.00 2.59
2344 4393 5.449588 GGTTCGGATGTGTTCTATCGTCTAA 60.450 44.000 0.00 0.00 0.00 2.10
2345 4394 6.207213 GTTCGGATGTGTTCTATCGTCTAAT 58.793 40.000 0.00 0.00 0.00 1.73
2346 4395 5.758924 TCGGATGTGTTCTATCGTCTAATG 58.241 41.667 0.00 0.00 0.00 1.90
2347 4396 4.383052 CGGATGTGTTCTATCGTCTAATGC 59.617 45.833 0.00 0.00 0.00 3.56
2348 4397 4.383052 GGATGTGTTCTATCGTCTAATGCG 59.617 45.833 0.00 0.00 0.00 4.73
2349 4398 3.702330 TGTGTTCTATCGTCTAATGCGG 58.298 45.455 0.00 0.00 0.00 5.69
2350 4399 3.129813 TGTGTTCTATCGTCTAATGCGGT 59.870 43.478 0.00 0.00 0.00 5.68
2351 4400 3.729716 GTGTTCTATCGTCTAATGCGGTC 59.270 47.826 0.00 0.00 0.00 4.79
2352 4401 3.630769 TGTTCTATCGTCTAATGCGGTCT 59.369 43.478 0.00 0.00 0.00 3.85
2353 4402 4.097437 TGTTCTATCGTCTAATGCGGTCTT 59.903 41.667 0.00 0.00 0.00 3.01
2354 4403 4.224715 TCTATCGTCTAATGCGGTCTTG 57.775 45.455 0.00 0.00 0.00 3.02
2355 4404 2.961526 ATCGTCTAATGCGGTCTTGT 57.038 45.000 0.00 0.00 0.00 3.16
2356 4405 4.818005 TCTATCGTCTAATGCGGTCTTGTA 59.182 41.667 0.00 0.00 0.00 2.41
2357 4406 4.585955 ATCGTCTAATGCGGTCTTGTAT 57.414 40.909 0.00 0.00 0.00 2.29
2358 4407 3.961182 TCGTCTAATGCGGTCTTGTATC 58.039 45.455 0.00 0.00 0.00 2.24
2359 4408 3.379057 TCGTCTAATGCGGTCTTGTATCA 59.621 43.478 0.00 0.00 0.00 2.15
2360 4409 3.731216 CGTCTAATGCGGTCTTGTATCAG 59.269 47.826 0.00 0.00 0.00 2.90
2361 4410 4.683832 GTCTAATGCGGTCTTGTATCAGT 58.316 43.478 0.00 0.00 0.00 3.41
2362 4411 4.740695 GTCTAATGCGGTCTTGTATCAGTC 59.259 45.833 0.00 0.00 0.00 3.51
2363 4412 2.604046 ATGCGGTCTTGTATCAGTCC 57.396 50.000 0.00 0.00 0.00 3.85
2364 4413 0.172578 TGCGGTCTTGTATCAGTCCG 59.827 55.000 2.52 2.52 45.15 4.79
2365 4414 0.172803 GCGGTCTTGTATCAGTCCGT 59.827 55.000 7.94 0.00 44.46 4.69
2366 4415 1.798079 GCGGTCTTGTATCAGTCCGTC 60.798 57.143 7.94 0.00 44.46 4.79
2367 4416 1.471287 CGGTCTTGTATCAGTCCGTCA 59.529 52.381 0.00 0.00 39.70 4.35
2368 4417 2.094906 CGGTCTTGTATCAGTCCGTCAA 60.095 50.000 0.00 0.00 39.70 3.18
2369 4418 3.512680 GGTCTTGTATCAGTCCGTCAAG 58.487 50.000 0.00 0.00 37.44 3.02
2370 4419 2.924290 GTCTTGTATCAGTCCGTCAAGC 59.076 50.000 0.00 0.00 36.47 4.01
2371 4420 1.920574 CTTGTATCAGTCCGTCAAGCG 59.079 52.381 0.00 0.00 40.95 4.68
2380 4429 3.786101 CGTCAAGCGGTCTGGATG 58.214 61.111 0.00 0.00 36.85 3.51
2381 4430 2.456119 CGTCAAGCGGTCTGGATGC 61.456 63.158 0.00 0.00 36.85 3.91
2382 4431 1.375908 GTCAAGCGGTCTGGATGCA 60.376 57.895 0.00 0.00 0.00 3.96
2383 4432 1.375908 TCAAGCGGTCTGGATGCAC 60.376 57.895 0.00 0.00 0.00 4.57
2384 4433 1.376424 CAAGCGGTCTGGATGCACT 60.376 57.895 0.00 0.00 0.00 4.40
2385 4434 0.957395 CAAGCGGTCTGGATGCACTT 60.957 55.000 0.00 0.00 0.00 3.16
2386 4435 0.250901 AAGCGGTCTGGATGCACTTT 60.251 50.000 0.00 0.00 0.00 2.66
2387 4436 0.250901 AGCGGTCTGGATGCACTTTT 60.251 50.000 0.00 0.00 0.00 2.27
2388 4437 0.598065 GCGGTCTGGATGCACTTTTT 59.402 50.000 0.00 0.00 0.00 1.94
2389 4438 1.401539 GCGGTCTGGATGCACTTTTTC 60.402 52.381 0.00 0.00 0.00 2.29
2390 4439 2.154462 CGGTCTGGATGCACTTTTTCT 58.846 47.619 0.00 0.00 0.00 2.52
2391 4440 2.160417 CGGTCTGGATGCACTTTTTCTC 59.840 50.000 0.00 0.00 0.00 2.87
2392 4441 2.160417 GGTCTGGATGCACTTTTTCTCG 59.840 50.000 0.00 0.00 0.00 4.04
2393 4442 2.808543 GTCTGGATGCACTTTTTCTCGT 59.191 45.455 0.00 0.00 0.00 4.18
2394 4443 3.994392 GTCTGGATGCACTTTTTCTCGTA 59.006 43.478 0.00 0.00 0.00 3.43
2395 4444 4.451096 GTCTGGATGCACTTTTTCTCGTAA 59.549 41.667 0.00 0.00 0.00 3.18
2396 4445 5.049680 GTCTGGATGCACTTTTTCTCGTAAA 60.050 40.000 0.00 0.00 0.00 2.01
2397 4446 5.705441 TCTGGATGCACTTTTTCTCGTAAAT 59.295 36.000 0.00 0.00 0.00 1.40
2398 4447 6.206634 TCTGGATGCACTTTTTCTCGTAAATT 59.793 34.615 0.00 0.00 0.00 1.82
2399 4448 6.148948 TGGATGCACTTTTTCTCGTAAATTG 58.851 36.000 0.00 0.00 0.00 2.32
2400 4449 6.016693 TGGATGCACTTTTTCTCGTAAATTGA 60.017 34.615 0.00 0.00 0.00 2.57
2401 4450 6.861055 GGATGCACTTTTTCTCGTAAATTGAA 59.139 34.615 0.00 0.00 0.00 2.69
2402 4451 7.381139 GGATGCACTTTTTCTCGTAAATTGAAA 59.619 33.333 0.00 0.00 0.00 2.69
2403 4452 7.678194 TGCACTTTTTCTCGTAAATTGAAAG 57.322 32.000 0.00 0.00 32.36 2.62
2404 4453 7.254852 TGCACTTTTTCTCGTAAATTGAAAGT 58.745 30.769 0.00 0.00 36.59 2.66
2405 4454 8.399425 TGCACTTTTTCTCGTAAATTGAAAGTA 58.601 29.630 0.00 0.00 34.99 2.24
2406 4455 9.228636 GCACTTTTTCTCGTAAATTGAAAGTAA 57.771 29.630 0.00 0.00 34.99 2.24
2411 4460 9.724839 TTTTCTCGTAAATTGAAAGTAAAGTGG 57.275 29.630 0.00 0.00 32.36 4.00
2735 4784 2.800970 AAAAATCCCCTCTCCCGGT 58.199 52.632 0.00 0.00 0.00 5.28
2736 4785 0.624254 AAAAATCCCCTCTCCCGGTC 59.376 55.000 0.00 0.00 0.00 4.79
2737 4786 1.279749 AAAATCCCCTCTCCCGGTCC 61.280 60.000 0.00 0.00 0.00 4.46
2738 4787 2.196304 AAATCCCCTCTCCCGGTCCT 62.196 60.000 0.00 0.00 0.00 3.85
2739 4788 1.301913 AATCCCCTCTCCCGGTCCTA 61.302 60.000 0.00 0.00 0.00 2.94
2740 4789 1.080927 ATCCCCTCTCCCGGTCCTAT 61.081 60.000 0.00 0.00 0.00 2.57
2741 4790 1.236282 CCCCTCTCCCGGTCCTATT 59.764 63.158 0.00 0.00 0.00 1.73
2742 4791 0.832559 CCCCTCTCCCGGTCCTATTC 60.833 65.000 0.00 0.00 0.00 1.75
2743 4792 0.188834 CCCTCTCCCGGTCCTATTCT 59.811 60.000 0.00 0.00 0.00 2.40
2744 4793 1.428139 CCCTCTCCCGGTCCTATTCTA 59.572 57.143 0.00 0.00 0.00 2.10
2745 4794 2.516906 CCTCTCCCGGTCCTATTCTAC 58.483 57.143 0.00 0.00 0.00 2.59
2746 4795 2.108601 CCTCTCCCGGTCCTATTCTACT 59.891 54.545 0.00 0.00 0.00 2.57
2747 4796 3.330110 CCTCTCCCGGTCCTATTCTACTA 59.670 52.174 0.00 0.00 0.00 1.82
2748 4797 4.325972 CTCTCCCGGTCCTATTCTACTAC 58.674 52.174 0.00 0.00 0.00 2.73
2749 4798 3.718434 TCTCCCGGTCCTATTCTACTACA 59.282 47.826 0.00 0.00 0.00 2.74
2750 4799 3.819902 CTCCCGGTCCTATTCTACTACAC 59.180 52.174 0.00 0.00 0.00 2.90
2751 4800 3.461085 TCCCGGTCCTATTCTACTACACT 59.539 47.826 0.00 0.00 0.00 3.55
2752 4801 3.819902 CCCGGTCCTATTCTACTACACTC 59.180 52.174 0.00 0.00 0.00 3.51
2753 4802 3.819902 CCGGTCCTATTCTACTACACTCC 59.180 52.174 0.00 0.00 0.00 3.85
2754 4803 3.497640 CGGTCCTATTCTACTACACTCCG 59.502 52.174 0.00 0.00 0.00 4.63
2755 4804 3.252944 GGTCCTATTCTACTACACTCCGC 59.747 52.174 0.00 0.00 0.00 5.54
2756 4805 3.252944 GTCCTATTCTACTACACTCCGCC 59.747 52.174 0.00 0.00 0.00 6.13
2757 4806 2.557490 CCTATTCTACTACACTCCGCCC 59.443 54.545 0.00 0.00 0.00 6.13
2758 4807 1.411041 ATTCTACTACACTCCGCCCC 58.589 55.000 0.00 0.00 0.00 5.80
2759 4808 0.333993 TTCTACTACACTCCGCCCCT 59.666 55.000 0.00 0.00 0.00 4.79
2760 4809 0.333993 TCTACTACACTCCGCCCCTT 59.666 55.000 0.00 0.00 0.00 3.95
2761 4810 0.745468 CTACTACACTCCGCCCCTTC 59.255 60.000 0.00 0.00 0.00 3.46
2762 4811 0.333993 TACTACACTCCGCCCCTTCT 59.666 55.000 0.00 0.00 0.00 2.85
2763 4812 0.971447 ACTACACTCCGCCCCTTCTC 60.971 60.000 0.00 0.00 0.00 2.87
2764 4813 1.677637 CTACACTCCGCCCCTTCTCC 61.678 65.000 0.00 0.00 0.00 3.71
2765 4814 3.787001 CACTCCGCCCCTTCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
2767 4816 4.806339 CTCCGCCCCTTCTCCCCT 62.806 72.222 0.00 0.00 0.00 4.79
2768 4817 4.348495 TCCGCCCCTTCTCCCCTT 62.348 66.667 0.00 0.00 0.00 3.95
2769 4818 3.339093 CCGCCCCTTCTCCCCTTT 61.339 66.667 0.00 0.00 0.00 3.11
2770 4819 2.044946 CGCCCCTTCTCCCCTTTG 60.045 66.667 0.00 0.00 0.00 2.77
2771 4820 2.363018 GCCCCTTCTCCCCTTTGC 60.363 66.667 0.00 0.00 0.00 3.68
2772 4821 2.923910 GCCCCTTCTCCCCTTTGCT 61.924 63.158 0.00 0.00 0.00 3.91
2773 4822 1.776969 CCCCTTCTCCCCTTTGCTT 59.223 57.895 0.00 0.00 0.00 3.91
2774 4823 0.323816 CCCCTTCTCCCCTTTGCTTC 60.324 60.000 0.00 0.00 0.00 3.86
2775 4824 0.678048 CCCTTCTCCCCTTTGCTTCG 60.678 60.000 0.00 0.00 0.00 3.79
2776 4825 1.308783 CCTTCTCCCCTTTGCTTCGC 61.309 60.000 0.00 0.00 0.00 4.70
2777 4826 0.606401 CTTCTCCCCTTTGCTTCGCA 60.606 55.000 0.00 0.00 36.47 5.10
2778 4827 0.038166 TTCTCCCCTTTGCTTCGCAT 59.962 50.000 0.00 0.00 38.76 4.73
2779 4828 0.392998 TCTCCCCTTTGCTTCGCATC 60.393 55.000 0.00 0.00 38.76 3.91
2780 4829 1.378514 TCCCCTTTGCTTCGCATCC 60.379 57.895 0.00 0.00 38.76 3.51
2781 4830 2.764314 CCCCTTTGCTTCGCATCCG 61.764 63.158 0.00 0.00 38.76 4.18
2782 4831 2.100991 CCTTTGCTTCGCATCCGC 59.899 61.111 0.00 0.00 38.76 5.54
2783 4832 2.689785 CCTTTGCTTCGCATCCGCA 61.690 57.895 0.00 0.00 38.76 5.69
2784 4833 1.512734 CTTTGCTTCGCATCCGCAC 60.513 57.895 0.00 0.00 38.76 5.34
2785 4834 2.855728 CTTTGCTTCGCATCCGCACC 62.856 60.000 0.00 0.00 38.76 5.01
2788 4837 2.436646 CTTCGCATCCGCACCCTT 60.437 61.111 0.00 0.00 38.40 3.95
2789 4838 2.033448 TTCGCATCCGCACCCTTT 59.967 55.556 0.00 0.00 38.40 3.11
2790 4839 1.586154 CTTCGCATCCGCACCCTTTT 61.586 55.000 0.00 0.00 38.40 2.27
2791 4840 1.175983 TTCGCATCCGCACCCTTTTT 61.176 50.000 0.00 0.00 38.40 1.94
2792 4841 1.154035 CGCATCCGCACCCTTTTTC 60.154 57.895 0.00 0.00 38.40 2.29
2793 4842 1.586154 CGCATCCGCACCCTTTTTCT 61.586 55.000 0.00 0.00 38.40 2.52
2794 4843 0.171231 GCATCCGCACCCTTTTTCTC 59.829 55.000 0.00 0.00 38.36 2.87
2795 4844 0.811281 CATCCGCACCCTTTTTCTCC 59.189 55.000 0.00 0.00 0.00 3.71
2796 4845 0.698818 ATCCGCACCCTTTTTCTCCT 59.301 50.000 0.00 0.00 0.00 3.69
2797 4846 0.036306 TCCGCACCCTTTTTCTCCTC 59.964 55.000 0.00 0.00 0.00 3.71
2798 4847 0.036875 CCGCACCCTTTTTCTCCTCT 59.963 55.000 0.00 0.00 0.00 3.69
2799 4848 1.160137 CGCACCCTTTTTCTCCTCTG 58.840 55.000 0.00 0.00 0.00 3.35
2800 4849 0.884514 GCACCCTTTTTCTCCTCTGC 59.115 55.000 0.00 0.00 0.00 4.26
2801 4850 1.539157 CACCCTTTTTCTCCTCTGCC 58.461 55.000 0.00 0.00 0.00 4.85
2802 4851 0.036875 ACCCTTTTTCTCCTCTGCCG 59.963 55.000 0.00 0.00 0.00 5.69
2803 4852 0.324943 CCCTTTTTCTCCTCTGCCGA 59.675 55.000 0.00 0.00 0.00 5.54
2804 4853 1.443802 CCTTTTTCTCCTCTGCCGAC 58.556 55.000 0.00 0.00 0.00 4.79
2805 4854 1.071605 CTTTTTCTCCTCTGCCGACG 58.928 55.000 0.00 0.00 0.00 5.12
2806 4855 0.949105 TTTTTCTCCTCTGCCGACGC 60.949 55.000 0.00 0.00 0.00 5.19
2807 4856 1.816863 TTTTCTCCTCTGCCGACGCT 61.817 55.000 0.00 0.00 35.36 5.07
2808 4857 2.492449 TTTCTCCTCTGCCGACGCTG 62.492 60.000 0.00 0.00 35.36 5.18
2812 4861 4.127040 CTCTGCCGACGCTGCTCT 62.127 66.667 0.00 0.00 35.36 4.09
2813 4862 4.121669 TCTGCCGACGCTGCTCTC 62.122 66.667 0.00 0.00 35.36 3.20
2814 4863 4.127040 CTGCCGACGCTGCTCTCT 62.127 66.667 0.00 0.00 35.36 3.10
2815 4864 2.750237 TGCCGACGCTGCTCTCTA 60.750 61.111 0.00 0.00 35.36 2.43
2816 4865 2.025441 GCCGACGCTGCTCTCTAG 59.975 66.667 0.00 0.00 0.00 2.43
2825 4874 2.818132 GCTCTCTAGCCGCCACAT 59.182 61.111 0.00 0.00 43.40 3.21
2826 4875 1.593750 GCTCTCTAGCCGCCACATG 60.594 63.158 0.00 0.00 43.40 3.21
2827 4876 1.068753 CTCTCTAGCCGCCACATGG 59.931 63.158 0.00 0.00 38.53 3.66
2828 4877 2.109799 CTCTAGCCGCCACATGGG 59.890 66.667 0.00 0.00 40.85 4.00
2837 4886 4.924019 CCACATGGGCATTGCAAG 57.076 55.556 11.39 0.00 0.00 4.01
2838 4887 2.278849 CCACATGGGCATTGCAAGA 58.721 52.632 11.39 0.00 0.00 3.02
2839 4888 0.108520 CCACATGGGCATTGCAAGAC 60.109 55.000 11.39 0.00 0.00 3.01
2840 4889 0.108520 CACATGGGCATTGCAAGACC 60.109 55.000 11.39 9.50 0.00 3.85
2841 4890 0.251922 ACATGGGCATTGCAAGACCT 60.252 50.000 18.06 5.16 0.00 3.85
2842 4891 0.458669 CATGGGCATTGCAAGACCTC 59.541 55.000 18.06 10.55 0.00 3.85
2843 4892 0.685458 ATGGGCATTGCAAGACCTCC 60.685 55.000 18.06 10.07 0.00 4.30
2844 4893 2.409870 GGGCATTGCAAGACCTCCG 61.410 63.158 17.42 0.00 0.00 4.63
2845 4894 2.486966 GCATTGCAAGACCTCCGC 59.513 61.111 4.94 0.00 0.00 5.54
2846 4895 2.334946 GCATTGCAAGACCTCCGCA 61.335 57.895 4.94 0.00 0.00 5.69
2848 4897 3.744559 TTGCAAGACCTCCGCAAC 58.255 55.556 0.00 0.00 40.54 4.17
2849 4898 1.896660 TTGCAAGACCTCCGCAACC 60.897 57.895 0.00 0.00 40.54 3.77
2850 4899 2.281484 GCAAGACCTCCGCAACCA 60.281 61.111 0.00 0.00 0.00 3.67
2851 4900 2.328099 GCAAGACCTCCGCAACCAG 61.328 63.158 0.00 0.00 0.00 4.00
2852 4901 2.032681 AAGACCTCCGCAACCAGC 59.967 61.111 0.00 0.00 40.87 4.85
2853 4902 2.818169 AAGACCTCCGCAACCAGCA 61.818 57.895 0.00 0.00 46.13 4.41
2854 4903 3.050275 GACCTCCGCAACCAGCAC 61.050 66.667 0.00 0.00 46.13 4.40
2855 4904 3.537206 GACCTCCGCAACCAGCACT 62.537 63.158 0.00 0.00 46.13 4.40
2856 4905 3.052082 CCTCCGCAACCAGCACTG 61.052 66.667 0.00 0.00 46.13 3.66
2877 4926 3.423154 CGCCCGCTCACCTTTCAC 61.423 66.667 0.00 0.00 0.00 3.18
2878 4927 3.423154 GCCCGCTCACCTTTCACG 61.423 66.667 0.00 0.00 0.00 4.35
2879 4928 2.742372 CCCGCTCACCTTTCACGG 60.742 66.667 0.00 0.00 43.44 4.94
2880 4929 3.423154 CCGCTCACCTTTCACGGC 61.423 66.667 0.00 0.00 37.05 5.68
2881 4930 3.777925 CGCTCACCTTTCACGGCG 61.778 66.667 4.80 4.80 36.89 6.46
2882 4931 2.357034 GCTCACCTTTCACGGCGA 60.357 61.111 16.62 0.00 0.00 5.54
2883 4932 2.668280 GCTCACCTTTCACGGCGAC 61.668 63.158 16.62 0.00 0.00 5.19
2895 4944 4.124351 GGCGACGTCGTCCATCCA 62.124 66.667 35.48 0.00 42.22 3.41
2896 4945 2.126228 GCGACGTCGTCCATCCAA 60.126 61.111 35.48 0.00 42.22 3.53
2897 4946 2.158959 GCGACGTCGTCCATCCAAG 61.159 63.158 35.48 7.57 42.22 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 100 6.238648 CCCAGTACCAGAAAGTGAACTTATT 58.761 40.000 0.00 0.00 34.61 1.40
99 102 4.041198 CCCCAGTACCAGAAAGTGAACTTA 59.959 45.833 0.00 0.00 34.61 2.24
108 111 2.696775 TCAACTCCCCAGTACCAGAAA 58.303 47.619 0.00 0.00 30.14 2.52
117 120 0.692476 TGGACACATCAACTCCCCAG 59.308 55.000 0.00 0.00 0.00 4.45
119 122 2.514458 AATGGACACATCAACTCCCC 57.486 50.000 0.00 0.00 35.94 4.81
132 135 7.698130 CACTAAATGGATTCTTCGAAAATGGAC 59.302 37.037 0.00 0.00 0.00 4.02
140 143 4.191544 CAGGCACTAAATGGATTCTTCGA 58.808 43.478 0.00 0.00 36.02 3.71
156 160 1.198637 GAATGAGTGAACTGCAGGCAC 59.801 52.381 25.61 25.61 0.00 5.01
161 165 2.936919 AGGTGAATGAGTGAACTGCA 57.063 45.000 0.00 0.00 0.00 4.41
165 169 4.811557 GGCTATGTAGGTGAATGAGTGAAC 59.188 45.833 0.00 0.00 0.00 3.18
211 218 7.092444 TGACAATAGATTGATAGAGGTTGGGTT 60.092 37.037 9.21 0.00 40.14 4.11
234 241 2.495084 GTTGGGTTCAGGAAGAGTGAC 58.505 52.381 0.00 0.00 0.00 3.67
239 246 1.133606 GGTTGGTTGGGTTCAGGAAGA 60.134 52.381 0.00 0.00 0.00 2.87
247 254 3.621682 TGAATTAGGGTTGGTTGGGTT 57.378 42.857 0.00 0.00 0.00 4.11
253 260 2.917713 TGCCATGAATTAGGGTTGGT 57.082 45.000 0.00 0.00 31.27 3.67
284 291 2.943690 ACGTCTATGCTTCGCTAGAGAA 59.056 45.455 8.70 8.70 0.00 2.87
288 295 2.784380 GACAACGTCTATGCTTCGCTAG 59.216 50.000 0.00 0.00 0.00 3.42
294 301 2.301870 TCCAAGGACAACGTCTATGCTT 59.698 45.455 0.00 0.00 32.47 3.91
327 334 2.703007 GCAGGATGTGAGGGATACTCTT 59.297 50.000 0.00 0.00 41.43 2.85
391 398 1.128724 GTCACTGAGTCGCGTCATCG 61.129 60.000 5.77 0.00 40.37 3.84
395 402 0.387367 ACATGTCACTGAGTCGCGTC 60.387 55.000 5.77 0.00 0.00 5.19
396 403 0.664466 CACATGTCACTGAGTCGCGT 60.664 55.000 5.77 0.00 0.00 6.01
431 438 4.525487 TGGCAATCTCAAAAAGATGAGCTT 59.475 37.500 10.57 0.00 44.26 3.74
441 448 6.159299 TCTTTGAACATGGCAATCTCAAAA 57.841 33.333 16.80 9.24 36.03 2.44
442 449 5.787953 TCTTTGAACATGGCAATCTCAAA 57.212 34.783 15.82 15.82 35.37 2.69
446 453 5.011329 ACAACATCTTTGAACATGGCAATCT 59.989 36.000 0.00 0.00 0.00 2.40
494 502 1.501741 CTTCCCATGTTTGCCGACG 59.498 57.895 0.00 0.00 0.00 5.12
503 511 2.781667 AGCTTATCCTCCTTCCCATGT 58.218 47.619 0.00 0.00 0.00 3.21
533 541 2.329379 CTCTGTTTCTACACCGCACTC 58.671 52.381 0.00 0.00 0.00 3.51
534 542 1.000955 CCTCTGTTTCTACACCGCACT 59.999 52.381 0.00 0.00 0.00 4.40
549 557 0.181350 GCTCAATACCCCACCCTCTG 59.819 60.000 0.00 0.00 0.00 3.35
603 626 1.388065 CCAGTGGGTTGCAACGGAAA 61.388 55.000 22.67 5.82 0.00 3.13
604 627 1.826054 CCAGTGGGTTGCAACGGAA 60.826 57.895 22.67 8.34 0.00 4.30
605 628 2.203280 CCAGTGGGTTGCAACGGA 60.203 61.111 22.67 9.19 0.00 4.69
606 629 3.977244 GCCAGTGGGTTGCAACGG 61.977 66.667 22.67 18.02 36.17 4.44
608 631 1.067916 CTTGCCAGTGGGTTGCAAC 59.932 57.895 21.59 21.59 39.86 4.17
609 632 0.975040 AACTTGCCAGTGGGTTGCAA 60.975 50.000 12.15 7.79 42.28 4.08
610 633 0.975040 AAACTTGCCAGTGGGTTGCA 60.975 50.000 12.15 0.00 36.17 4.08
611 634 0.249447 GAAACTTGCCAGTGGGTTGC 60.249 55.000 12.15 1.42 36.17 4.17
612 635 0.030638 CGAAACTTGCCAGTGGGTTG 59.969 55.000 12.15 0.00 36.17 3.77
613 636 0.395173 ACGAAACTTGCCAGTGGGTT 60.395 50.000 12.15 3.74 36.17 4.11
614 637 0.470766 TACGAAACTTGCCAGTGGGT 59.529 50.000 12.15 0.00 36.17 4.51
615 638 0.872388 GTACGAAACTTGCCAGTGGG 59.128 55.000 12.15 0.00 31.60 4.61
616 639 1.878953 AGTACGAAACTTGCCAGTGG 58.121 50.000 4.20 4.20 33.35 4.00
618 641 3.305881 GGACTAGTACGAAACTTGCCAGT 60.306 47.826 0.00 0.00 39.80 4.00
619 642 3.251571 GGACTAGTACGAAACTTGCCAG 58.748 50.000 0.00 0.00 39.80 4.85
620 643 2.028748 GGGACTAGTACGAAACTTGCCA 60.029 50.000 0.00 0.00 39.80 4.92
621 644 2.233186 AGGGACTAGTACGAAACTTGCC 59.767 50.000 0.00 0.00 39.80 4.52
623 646 7.951530 TTTTTAGGGACTAGTACGAAACTTG 57.048 36.000 0.00 0.00 44.25 3.16
673 706 2.049985 CGGCCGGCGAGATAAGAG 60.050 66.667 22.54 0.00 0.00 2.85
674 707 4.280494 GCGGCCGGCGAGATAAGA 62.280 66.667 29.38 0.00 0.00 2.10
690 723 3.470888 TAGCAGGCGGAGGAAGGC 61.471 66.667 0.00 0.00 0.00 4.35
803 1157 2.601299 GAAGGGGGAAATCCGGGG 59.399 66.667 0.00 0.00 36.71 5.73
813 1167 1.054406 TTCAGATAGCGGGAAGGGGG 61.054 60.000 0.00 0.00 0.00 5.40
976 1331 0.685458 GCTCCCCACCTAACGGACTA 60.685 60.000 0.00 0.00 0.00 2.59
1047 1402 0.460987 GCAGTATCAGCTTGTCGCCT 60.461 55.000 0.00 0.00 40.39 5.52
1272 1627 2.811873 GCAGTGACAAGGTGGACTGAAT 60.812 50.000 11.70 0.00 35.31 2.57
1283 1638 1.851053 CGATCGATGAGCAGTGACAAG 59.149 52.381 10.26 0.00 0.00 3.16
1318 1673 0.245539 TGGTGAGCTAACTGTACCGC 59.754 55.000 0.00 0.00 34.10 5.68
1339 1694 4.341036 CAGCATTCTCTGATACGGAACGG 61.341 52.174 0.00 0.00 46.93 4.44
1341 1696 2.541762 GCAGCATTCTCTGATACGGAAC 59.458 50.000 0.00 0.00 36.19 3.62
1342 1697 2.483714 GGCAGCATTCTCTGATACGGAA 60.484 50.000 0.00 0.00 36.19 4.30
1344 1699 1.202568 TGGCAGCATTCTCTGATACGG 60.203 52.381 0.00 0.00 36.19 4.02
1345 1700 2.229675 TGGCAGCATTCTCTGATACG 57.770 50.000 0.00 0.00 36.19 3.06
1346 1701 2.225963 GCATGGCAGCATTCTCTGATAC 59.774 50.000 0.00 0.00 36.19 2.24
1347 1702 2.501261 GCATGGCAGCATTCTCTGATA 58.499 47.619 0.00 0.00 36.19 2.15
1348 1703 1.319541 GCATGGCAGCATTCTCTGAT 58.680 50.000 0.00 0.00 36.19 2.90
1349 1704 1.093496 CGCATGGCAGCATTCTCTGA 61.093 55.000 9.10 0.00 36.19 3.27
1350 1705 1.355563 CGCATGGCAGCATTCTCTG 59.644 57.895 9.10 0.00 37.15 3.35
1351 1706 0.178767 TACGCATGGCAGCATTCTCT 59.821 50.000 9.10 0.00 0.00 3.10
1352 1707 0.305922 GTACGCATGGCAGCATTCTC 59.694 55.000 9.10 0.00 0.00 2.87
1358 1713 2.387445 TGAACGTACGCATGGCAGC 61.387 57.895 16.72 0.00 0.00 5.25
1370 1725 1.873591 GCAAGGAATCACTGTGAACGT 59.126 47.619 15.31 10.51 0.00 3.99
1391 1746 2.222707 TGCATAGCAATCGAAACGTTCG 60.223 45.455 0.00 7.53 44.71 3.95
1464 1844 9.166173 GCTCTGGAAATGCAACATATACATATA 57.834 33.333 0.00 0.00 0.00 0.86
1465 1845 7.121759 GGCTCTGGAAATGCAACATATACATAT 59.878 37.037 0.00 0.00 0.00 1.78
1466 1846 6.430925 GGCTCTGGAAATGCAACATATACATA 59.569 38.462 0.00 0.00 0.00 2.29
1467 1847 5.242393 GGCTCTGGAAATGCAACATATACAT 59.758 40.000 0.00 0.00 0.00 2.29
1500 1880 1.689352 CGATACGGTCCGTTGCCAAC 61.689 60.000 24.36 1.91 41.54 3.77
1528 1908 0.320697 AAACTACTCCCACCGCAGTC 59.679 55.000 0.00 0.00 0.00 3.51
1530 1910 0.673644 CCAAACTACTCCCACCGCAG 60.674 60.000 0.00 0.00 0.00 5.18
1543 1923 9.905713 TTATTCTGATTTAGTCTATGCCAAACT 57.094 29.630 0.00 0.00 0.00 2.66
1568 1948 9.405587 CTTGGTAAATTACACGAAAACATCATT 57.594 29.630 5.45 0.00 0.00 2.57
1590 2906 7.798596 AGATGAATCTAATTACACTGCTTGG 57.201 36.000 0.00 0.00 34.85 3.61
1604 2920 5.173664 CACTGTGCTGACAAGATGAATCTA 58.826 41.667 0.00 0.00 35.76 1.98
1633 3663 4.081972 GCTTACTGTTGATCCACTCAGAGA 60.082 45.833 3.79 0.00 34.68 3.10
1635 3665 3.834813 AGCTTACTGTTGATCCACTCAGA 59.165 43.478 0.00 0.00 34.68 3.27
1659 3689 1.076187 AGGAAGCCAAAAGGAAGGGAG 59.924 52.381 0.00 0.00 0.00 4.30
1728 3759 2.578940 TCCAAAAGGTTATGGGACGGAT 59.421 45.455 0.00 0.00 37.31 4.18
1735 3766 2.747446 CACCGACTCCAAAAGGTTATGG 59.253 50.000 0.00 0.00 38.09 2.74
1737 3768 2.878526 GCCACCGACTCCAAAAGGTTAT 60.879 50.000 0.00 0.00 34.25 1.89
1846 3877 1.445582 CAAGTAGTCCACGACGCCC 60.446 63.158 0.00 0.00 37.67 6.13
1891 3922 0.450983 GTTCTGCTCAAGCTCATGCC 59.549 55.000 3.32 0.00 42.66 4.40
1898 3929 3.572584 CCAAATGAAGTTCTGCTCAAGC 58.427 45.455 4.17 0.00 42.50 4.01
1899 3930 3.822735 TCCCAAATGAAGTTCTGCTCAAG 59.177 43.478 4.17 0.00 0.00 3.02
1900 3931 3.831323 TCCCAAATGAAGTTCTGCTCAA 58.169 40.909 4.17 0.00 0.00 3.02
1901 3932 3.507162 TCCCAAATGAAGTTCTGCTCA 57.493 42.857 4.17 0.00 0.00 4.26
1902 3933 4.802999 CTTTCCCAAATGAAGTTCTGCTC 58.197 43.478 4.17 0.00 0.00 4.26
1903 3934 3.006217 GCTTTCCCAAATGAAGTTCTGCT 59.994 43.478 4.17 0.00 0.00 4.24
1916 3947 0.692419 TTTTGGCCAGGCTTTCCCAA 60.692 50.000 12.43 3.45 35.68 4.12
1919 3953 0.674581 GCATTTTGGCCAGGCTTTCC 60.675 55.000 12.43 0.00 0.00 3.13
1929 3963 0.904394 TTCTGAGGGGGCATTTTGGC 60.904 55.000 0.00 0.00 42.88 4.52
1939 3973 2.089980 CTCAACTGCAATTCTGAGGGG 58.910 52.381 6.24 0.00 33.20 4.79
1950 3984 2.551032 CACAGAAATCAGCTCAACTGCA 59.449 45.455 0.00 0.00 46.76 4.41
1968 4002 5.102313 CAGCACGTTTATAGATGAGACACA 58.898 41.667 0.00 0.00 0.00 3.72
1975 4009 6.775088 ACAATCAACAGCACGTTTATAGATG 58.225 36.000 0.00 0.00 34.86 2.90
1976 4010 6.818644 AGACAATCAACAGCACGTTTATAGAT 59.181 34.615 0.00 0.00 34.86 1.98
1989 4029 6.346919 CCGAAGAGTAACAAGACAATCAACAG 60.347 42.308 0.00 0.00 0.00 3.16
2000 4040 2.349886 GCATCAGCCGAAGAGTAACAAG 59.650 50.000 0.00 0.00 33.58 3.16
2001 4041 2.028112 AGCATCAGCCGAAGAGTAACAA 60.028 45.455 0.00 0.00 43.56 2.83
2003 4043 1.929836 CAGCATCAGCCGAAGAGTAAC 59.070 52.381 0.00 0.00 43.56 2.50
2010 4050 1.135315 GCAATTTCAGCATCAGCCGAA 60.135 47.619 0.00 0.00 43.56 4.30
2018 4058 1.205179 TGATTGCGGCAATTTCAGCAT 59.795 42.857 27.24 5.27 39.50 3.79
2039 4079 5.276868 CGTAGCACTATCAATCTTTTTCCCG 60.277 44.000 0.00 0.00 0.00 5.14
2048 4088 8.728833 ACCTAGTATTACGTAGCACTATCAATC 58.271 37.037 14.95 0.00 0.00 2.67
2055 4095 5.809051 GCAAAACCTAGTATTACGTAGCACT 59.191 40.000 13.62 13.62 0.00 4.40
2060 4100 4.742417 TGCGCAAAACCTAGTATTACGTA 58.258 39.130 8.16 0.00 0.00 3.57
2061 4101 3.587923 TGCGCAAAACCTAGTATTACGT 58.412 40.909 8.16 0.00 0.00 3.57
2062 4102 3.861113 TCTGCGCAAAACCTAGTATTACG 59.139 43.478 13.05 0.00 0.00 3.18
2063 4103 4.868734 AGTCTGCGCAAAACCTAGTATTAC 59.131 41.667 13.05 0.00 0.00 1.89
2064 4104 4.868171 CAGTCTGCGCAAAACCTAGTATTA 59.132 41.667 13.05 0.00 0.00 0.98
2065 4105 3.684788 CAGTCTGCGCAAAACCTAGTATT 59.315 43.478 13.05 0.00 0.00 1.89
2066 4106 3.056107 TCAGTCTGCGCAAAACCTAGTAT 60.056 43.478 13.05 0.00 0.00 2.12
2159 4199 6.075762 TGTCCTTTGCATTATGTATGATGC 57.924 37.500 12.96 12.96 46.36 3.91
2172 4219 4.996758 CGATATGGTGATATGTCCTTTGCA 59.003 41.667 0.00 0.00 0.00 4.08
2178 4225 4.158579 TCAGCTCGATATGGTGATATGTCC 59.841 45.833 1.34 0.00 37.07 4.02
2179 4226 5.316327 TCAGCTCGATATGGTGATATGTC 57.684 43.478 1.34 0.00 37.07 3.06
2180 4227 5.728637 TTCAGCTCGATATGGTGATATGT 57.271 39.130 5.96 0.00 40.83 2.29
2181 4228 5.061435 CGTTTCAGCTCGATATGGTGATATG 59.939 44.000 5.96 3.97 40.83 1.78
2206 4255 0.105039 CTGCCAGGTATCCGTCCTTC 59.895 60.000 0.00 0.00 32.37 3.46
2213 4262 2.683362 GTTGTTTAGCTGCCAGGTATCC 59.317 50.000 4.19 0.00 0.00 2.59
2216 4265 2.940994 TGTTGTTTAGCTGCCAGGTA 57.059 45.000 0.00 0.00 0.00 3.08
2224 4273 5.570234 TTTTCCGTTCTTGTTGTTTAGCT 57.430 34.783 0.00 0.00 0.00 3.32
2243 4292 1.170290 CGTTGGAGACGCCCCTTTTT 61.170 55.000 0.00 0.00 45.86 1.94
2253 4302 1.197721 CTTTGTGATGGCGTTGGAGAC 59.802 52.381 0.00 0.00 0.00 3.36
2254 4303 1.522668 CTTTGTGATGGCGTTGGAGA 58.477 50.000 0.00 0.00 0.00 3.71
2255 4304 0.109597 GCTTTGTGATGGCGTTGGAG 60.110 55.000 0.00 0.00 0.00 3.86
2256 4305 1.523154 GGCTTTGTGATGGCGTTGGA 61.523 55.000 0.00 0.00 0.00 3.53
2257 4306 1.080569 GGCTTTGTGATGGCGTTGG 60.081 57.895 0.00 0.00 0.00 3.77
2258 4307 0.109597 GAGGCTTTGTGATGGCGTTG 60.110 55.000 0.00 0.00 0.00 4.10
2259 4308 1.244019 GGAGGCTTTGTGATGGCGTT 61.244 55.000 0.00 0.00 0.00 4.84
2260 4309 1.675641 GGAGGCTTTGTGATGGCGT 60.676 57.895 0.00 0.00 0.00 5.68
2261 4310 2.409870 GGGAGGCTTTGTGATGGCG 61.410 63.158 0.00 0.00 0.00 5.69
2262 4311 1.304381 TGGGAGGCTTTGTGATGGC 60.304 57.895 0.00 0.00 0.00 4.40
2263 4312 0.251297 TGTGGGAGGCTTTGTGATGG 60.251 55.000 0.00 0.00 0.00 3.51
2264 4313 1.843368 ATGTGGGAGGCTTTGTGATG 58.157 50.000 0.00 0.00 0.00 3.07
2265 4314 2.680805 CGTATGTGGGAGGCTTTGTGAT 60.681 50.000 0.00 0.00 0.00 3.06
2266 4315 1.338674 CGTATGTGGGAGGCTTTGTGA 60.339 52.381 0.00 0.00 0.00 3.58
2267 4316 1.086696 CGTATGTGGGAGGCTTTGTG 58.913 55.000 0.00 0.00 0.00 3.33
2268 4317 0.981183 TCGTATGTGGGAGGCTTTGT 59.019 50.000 0.00 0.00 0.00 2.83
2269 4318 2.332063 ATCGTATGTGGGAGGCTTTG 57.668 50.000 0.00 0.00 0.00 2.77
2270 4319 2.741878 CGAATCGTATGTGGGAGGCTTT 60.742 50.000 0.00 0.00 0.00 3.51
2271 4320 1.202533 CGAATCGTATGTGGGAGGCTT 60.203 52.381 0.00 0.00 0.00 4.35
2272 4321 0.389391 CGAATCGTATGTGGGAGGCT 59.611 55.000 0.00 0.00 0.00 4.58
2273 4322 0.600255 CCGAATCGTATGTGGGAGGC 60.600 60.000 0.82 0.00 0.00 4.70
2274 4323 1.037493 TCCGAATCGTATGTGGGAGG 58.963 55.000 0.82 0.00 0.00 4.30
2275 4324 1.269621 GGTCCGAATCGTATGTGGGAG 60.270 57.143 0.82 0.00 0.00 4.30
2276 4325 0.748450 GGTCCGAATCGTATGTGGGA 59.252 55.000 0.82 0.00 0.00 4.37
2277 4326 0.462375 TGGTCCGAATCGTATGTGGG 59.538 55.000 0.82 0.00 0.00 4.61
2278 4327 1.567504 GTGGTCCGAATCGTATGTGG 58.432 55.000 0.82 0.00 0.00 4.17
2279 4328 1.197055 CGTGGTCCGAATCGTATGTG 58.803 55.000 0.82 0.00 39.56 3.21
2280 4329 0.526954 GCGTGGTCCGAATCGTATGT 60.527 55.000 0.82 0.00 39.56 2.29
2281 4330 1.537289 CGCGTGGTCCGAATCGTATG 61.537 60.000 0.82 0.00 39.56 2.39
2282 4331 1.298863 CGCGTGGTCCGAATCGTAT 60.299 57.895 0.82 0.00 39.56 3.06
2283 4332 2.100797 CGCGTGGTCCGAATCGTA 59.899 61.111 0.82 0.00 39.56 3.43
2284 4333 4.789075 CCGCGTGGTCCGAATCGT 62.789 66.667 6.91 0.00 39.56 3.73
2294 4343 0.742990 AACATGTCCATACCGCGTGG 60.743 55.000 14.93 14.93 42.84 4.94
2295 4344 1.083489 AAACATGTCCATACCGCGTG 58.917 50.000 4.92 0.00 0.00 5.34
2296 4345 1.466950 CAAAACATGTCCATACCGCGT 59.533 47.619 4.92 0.00 0.00 6.01
2297 4346 1.793714 GCAAAACATGTCCATACCGCG 60.794 52.381 0.00 0.00 0.00 6.46
2298 4347 1.793714 CGCAAAACATGTCCATACCGC 60.794 52.381 0.00 0.00 0.00 5.68
2299 4348 1.466950 ACGCAAAACATGTCCATACCG 59.533 47.619 0.00 0.45 0.00 4.02
2300 4349 2.415357 CCACGCAAAACATGTCCATACC 60.415 50.000 0.00 0.00 0.00 2.73
2301 4350 2.227865 ACCACGCAAAACATGTCCATAC 59.772 45.455 0.00 0.00 0.00 2.39
2302 4351 2.509569 ACCACGCAAAACATGTCCATA 58.490 42.857 0.00 0.00 0.00 2.74
2303 4352 1.327303 ACCACGCAAAACATGTCCAT 58.673 45.000 0.00 0.00 0.00 3.41
2304 4353 1.066303 GAACCACGCAAAACATGTCCA 59.934 47.619 0.00 0.00 0.00 4.02
2305 4354 1.766069 GAACCACGCAAAACATGTCC 58.234 50.000 0.00 0.00 0.00 4.02
2306 4355 1.394697 CGAACCACGCAAAACATGTC 58.605 50.000 0.00 0.00 34.51 3.06
2307 4356 0.030101 CCGAACCACGCAAAACATGT 59.970 50.000 0.00 0.00 41.07 3.21
2308 4357 0.309302 TCCGAACCACGCAAAACATG 59.691 50.000 0.00 0.00 41.07 3.21
2309 4358 1.068610 CATCCGAACCACGCAAAACAT 60.069 47.619 0.00 0.00 41.07 2.71
2310 4359 0.309302 CATCCGAACCACGCAAAACA 59.691 50.000 0.00 0.00 41.07 2.83
2311 4360 0.309612 ACATCCGAACCACGCAAAAC 59.690 50.000 0.00 0.00 41.07 2.43
2312 4361 0.309302 CACATCCGAACCACGCAAAA 59.691 50.000 0.00 0.00 41.07 2.44
2313 4362 0.816018 ACACATCCGAACCACGCAAA 60.816 50.000 0.00 0.00 41.07 3.68
2314 4363 0.816018 AACACATCCGAACCACGCAA 60.816 50.000 0.00 0.00 41.07 4.85
2315 4364 1.225376 GAACACATCCGAACCACGCA 61.225 55.000 0.00 0.00 41.07 5.24
2316 4365 0.949105 AGAACACATCCGAACCACGC 60.949 55.000 0.00 0.00 41.07 5.34
2317 4366 2.357327 TAGAACACATCCGAACCACG 57.643 50.000 0.00 0.00 42.18 4.94
2318 4367 2.858344 CGATAGAACACATCCGAACCAC 59.142 50.000 0.00 0.00 39.76 4.16
2319 4368 2.494471 ACGATAGAACACATCCGAACCA 59.506 45.455 0.00 0.00 41.38 3.67
2320 4369 3.114065 GACGATAGAACACATCCGAACC 58.886 50.000 0.00 0.00 41.38 3.62
2321 4370 4.030134 AGACGATAGAACACATCCGAAC 57.970 45.455 0.00 0.00 41.38 3.95
2322 4371 5.823209 TTAGACGATAGAACACATCCGAA 57.177 39.130 0.00 0.00 41.38 4.30
2323 4372 5.758924 CATTAGACGATAGAACACATCCGA 58.241 41.667 0.00 0.00 41.38 4.55
2324 4373 4.383052 GCATTAGACGATAGAACACATCCG 59.617 45.833 0.00 0.00 41.38 4.18
2325 4374 4.383052 CGCATTAGACGATAGAACACATCC 59.617 45.833 0.00 0.00 41.38 3.51
2326 4375 4.383052 CCGCATTAGACGATAGAACACATC 59.617 45.833 0.00 0.00 41.38 3.06
2327 4376 4.202121 ACCGCATTAGACGATAGAACACAT 60.202 41.667 0.00 0.00 41.38 3.21
2328 4377 3.129813 ACCGCATTAGACGATAGAACACA 59.870 43.478 0.00 0.00 41.38 3.72
2329 4378 3.703420 ACCGCATTAGACGATAGAACAC 58.297 45.455 0.00 0.00 41.38 3.32
2330 4379 3.630769 AGACCGCATTAGACGATAGAACA 59.369 43.478 0.00 0.00 41.38 3.18
2331 4380 4.226113 AGACCGCATTAGACGATAGAAC 57.774 45.455 0.00 0.00 41.38 3.01
2332 4381 4.097437 ACAAGACCGCATTAGACGATAGAA 59.903 41.667 0.00 0.00 41.38 2.10
2333 4382 3.630769 ACAAGACCGCATTAGACGATAGA 59.369 43.478 0.00 0.00 41.38 1.98
2334 4383 3.966154 ACAAGACCGCATTAGACGATAG 58.034 45.455 0.00 0.00 46.19 2.08
2335 4384 5.239963 TGATACAAGACCGCATTAGACGATA 59.760 40.000 0.00 0.00 0.00 2.92
2336 4385 2.961526 ACAAGACCGCATTAGACGAT 57.038 45.000 0.00 0.00 0.00 3.73
2337 4386 3.379057 TGATACAAGACCGCATTAGACGA 59.621 43.478 0.00 0.00 0.00 4.20
2338 4387 3.702330 TGATACAAGACCGCATTAGACG 58.298 45.455 0.00 0.00 0.00 4.18
2339 4388 4.683832 ACTGATACAAGACCGCATTAGAC 58.316 43.478 0.00 0.00 0.00 2.59
2340 4389 4.202121 GGACTGATACAAGACCGCATTAGA 60.202 45.833 0.00 0.00 0.00 2.10
2341 4390 4.051922 GGACTGATACAAGACCGCATTAG 58.948 47.826 0.00 0.00 0.00 1.73
2342 4391 3.490249 CGGACTGATACAAGACCGCATTA 60.490 47.826 2.45 0.00 45.67 1.90
2343 4392 2.738643 CGGACTGATACAAGACCGCATT 60.739 50.000 2.45 0.00 45.67 3.56
2344 4393 1.202417 CGGACTGATACAAGACCGCAT 60.202 52.381 2.45 0.00 45.67 4.73
2345 4394 0.172578 CGGACTGATACAAGACCGCA 59.827 55.000 2.45 0.00 45.67 5.69
2346 4395 2.959275 CGGACTGATACAAGACCGC 58.041 57.895 2.45 0.00 45.67 5.68
2348 4397 3.512680 CTTGACGGACTGATACAAGACC 58.487 50.000 0.00 0.00 39.84 3.85
2349 4398 2.924290 GCTTGACGGACTGATACAAGAC 59.076 50.000 17.54 9.72 39.84 3.01
2350 4399 2.415491 CGCTTGACGGACTGATACAAGA 60.415 50.000 17.54 0.00 39.84 3.02
2351 4400 1.920574 CGCTTGACGGACTGATACAAG 59.079 52.381 0.00 0.00 40.24 3.16
2352 4401 1.990799 CGCTTGACGGACTGATACAA 58.009 50.000 0.00 0.00 38.44 2.41
2353 4402 3.713936 CGCTTGACGGACTGATACA 57.286 52.632 0.00 0.00 38.44 2.29
2363 4412 2.456119 GCATCCAGACCGCTTGACG 61.456 63.158 0.00 0.00 43.15 4.35
2364 4413 1.375908 TGCATCCAGACCGCTTGAC 60.376 57.895 0.00 0.00 0.00 3.18
2365 4414 1.375908 GTGCATCCAGACCGCTTGA 60.376 57.895 0.00 0.00 0.00 3.02
2366 4415 0.957395 AAGTGCATCCAGACCGCTTG 60.957 55.000 0.00 0.00 0.00 4.01
2367 4416 0.250901 AAAGTGCATCCAGACCGCTT 60.251 50.000 0.00 0.00 0.00 4.68
2368 4417 0.250901 AAAAGTGCATCCAGACCGCT 60.251 50.000 0.00 0.00 0.00 5.52
2369 4418 0.598065 AAAAAGTGCATCCAGACCGC 59.402 50.000 0.00 0.00 0.00 5.68
2370 4419 2.154462 AGAAAAAGTGCATCCAGACCG 58.846 47.619 0.00 0.00 0.00 4.79
2371 4420 2.160417 CGAGAAAAAGTGCATCCAGACC 59.840 50.000 0.00 0.00 0.00 3.85
2372 4421 2.808543 ACGAGAAAAAGTGCATCCAGAC 59.191 45.455 0.00 0.00 0.00 3.51
2373 4422 3.126001 ACGAGAAAAAGTGCATCCAGA 57.874 42.857 0.00 0.00 0.00 3.86
2374 4423 5.356882 TTTACGAGAAAAAGTGCATCCAG 57.643 39.130 0.00 0.00 0.00 3.86
2375 4424 5.957842 ATTTACGAGAAAAAGTGCATCCA 57.042 34.783 0.00 0.00 0.00 3.41
2376 4425 6.378582 TCAATTTACGAGAAAAAGTGCATCC 58.621 36.000 0.00 0.00 33.25 3.51
2377 4426 7.851822 TTCAATTTACGAGAAAAAGTGCATC 57.148 32.000 0.00 0.00 33.25 3.91
2378 4427 7.920682 ACTTTCAATTTACGAGAAAAAGTGCAT 59.079 29.630 0.00 0.00 34.99 3.96
2379 4428 7.254852 ACTTTCAATTTACGAGAAAAAGTGCA 58.745 30.769 0.00 0.00 34.99 4.57
2380 4429 7.679659 ACTTTCAATTTACGAGAAAAAGTGC 57.320 32.000 0.00 0.00 34.99 4.40
2385 4434 9.724839 CCACTTTACTTTCAATTTACGAGAAAA 57.275 29.630 0.00 0.00 31.59 2.29
2717 4766 0.624254 GACCGGGAGAGGGGATTTTT 59.376 55.000 6.32 0.00 35.02 1.94
2718 4767 1.279749 GGACCGGGAGAGGGGATTTT 61.280 60.000 6.32 0.00 35.02 1.82
2719 4768 1.693103 GGACCGGGAGAGGGGATTT 60.693 63.158 6.32 0.00 35.02 2.17
2720 4769 1.301913 TAGGACCGGGAGAGGGGATT 61.302 60.000 6.32 0.00 35.02 3.01
2721 4770 1.080927 ATAGGACCGGGAGAGGGGAT 61.081 60.000 6.32 0.00 35.02 3.85
2722 4771 1.301913 AATAGGACCGGGAGAGGGGA 61.302 60.000 6.32 0.00 35.02 4.81
2723 4772 0.832559 GAATAGGACCGGGAGAGGGG 60.833 65.000 6.32 0.00 35.02 4.79
2724 4773 0.188834 AGAATAGGACCGGGAGAGGG 59.811 60.000 6.32 0.00 35.02 4.30
2725 4774 2.108601 AGTAGAATAGGACCGGGAGAGG 59.891 54.545 6.32 0.00 37.30 3.69
2726 4775 3.512219 AGTAGAATAGGACCGGGAGAG 57.488 52.381 6.32 0.00 0.00 3.20
2727 4776 3.718434 TGTAGTAGAATAGGACCGGGAGA 59.282 47.826 6.32 0.00 0.00 3.71
2728 4777 3.819902 GTGTAGTAGAATAGGACCGGGAG 59.180 52.174 6.32 0.00 0.00 4.30
2729 4778 3.461085 AGTGTAGTAGAATAGGACCGGGA 59.539 47.826 6.32 0.00 0.00 5.14
2730 4779 3.819902 GAGTGTAGTAGAATAGGACCGGG 59.180 52.174 6.32 0.00 0.00 5.73
2731 4780 3.819902 GGAGTGTAGTAGAATAGGACCGG 59.180 52.174 0.00 0.00 0.00 5.28
2732 4781 3.497640 CGGAGTGTAGTAGAATAGGACCG 59.502 52.174 0.00 0.00 0.00 4.79
2733 4782 3.252944 GCGGAGTGTAGTAGAATAGGACC 59.747 52.174 0.00 0.00 0.00 4.46
2734 4783 3.252944 GGCGGAGTGTAGTAGAATAGGAC 59.747 52.174 0.00 0.00 0.00 3.85
2735 4784 3.484407 GGCGGAGTGTAGTAGAATAGGA 58.516 50.000 0.00 0.00 0.00 2.94
2736 4785 2.557490 GGGCGGAGTGTAGTAGAATAGG 59.443 54.545 0.00 0.00 0.00 2.57
2737 4786 2.557490 GGGGCGGAGTGTAGTAGAATAG 59.443 54.545 0.00 0.00 0.00 1.73
2738 4787 2.176364 AGGGGCGGAGTGTAGTAGAATA 59.824 50.000 0.00 0.00 0.00 1.75
2739 4788 1.063114 AGGGGCGGAGTGTAGTAGAAT 60.063 52.381 0.00 0.00 0.00 2.40
2740 4789 0.333993 AGGGGCGGAGTGTAGTAGAA 59.666 55.000 0.00 0.00 0.00 2.10
2741 4790 0.333993 AAGGGGCGGAGTGTAGTAGA 59.666 55.000 0.00 0.00 0.00 2.59
2742 4791 0.745468 GAAGGGGCGGAGTGTAGTAG 59.255 60.000 0.00 0.00 0.00 2.57
2743 4792 0.333993 AGAAGGGGCGGAGTGTAGTA 59.666 55.000 0.00 0.00 0.00 1.82
2744 4793 0.971447 GAGAAGGGGCGGAGTGTAGT 60.971 60.000 0.00 0.00 0.00 2.73
2745 4794 1.677637 GGAGAAGGGGCGGAGTGTAG 61.678 65.000 0.00 0.00 0.00 2.74
2746 4795 1.684734 GGAGAAGGGGCGGAGTGTA 60.685 63.158 0.00 0.00 0.00 2.90
2747 4796 3.003763 GGAGAAGGGGCGGAGTGT 61.004 66.667 0.00 0.00 0.00 3.55
2748 4797 3.787001 GGGAGAAGGGGCGGAGTG 61.787 72.222 0.00 0.00 0.00 3.51
2750 4799 4.806339 AGGGGAGAAGGGGCGGAG 62.806 72.222 0.00 0.00 0.00 4.63
2751 4800 3.883822 AAAGGGGAGAAGGGGCGGA 62.884 63.158 0.00 0.00 0.00 5.54
2752 4801 3.339093 AAAGGGGAGAAGGGGCGG 61.339 66.667 0.00 0.00 0.00 6.13
2753 4802 2.044946 CAAAGGGGAGAAGGGGCG 60.045 66.667 0.00 0.00 0.00 6.13
2754 4803 2.363018 GCAAAGGGGAGAAGGGGC 60.363 66.667 0.00 0.00 0.00 5.80
2755 4804 0.323816 GAAGCAAAGGGGAGAAGGGG 60.324 60.000 0.00 0.00 0.00 4.79
2756 4805 0.678048 CGAAGCAAAGGGGAGAAGGG 60.678 60.000 0.00 0.00 0.00 3.95
2757 4806 2.859992 CGAAGCAAAGGGGAGAAGG 58.140 57.895 0.00 0.00 0.00 3.46
2775 4824 0.171231 GAGAAAAAGGGTGCGGATGC 59.829 55.000 0.00 0.00 43.20 3.91
2776 4825 0.811281 GGAGAAAAAGGGTGCGGATG 59.189 55.000 0.00 0.00 0.00 3.51
2777 4826 0.698818 AGGAGAAAAAGGGTGCGGAT 59.301 50.000 0.00 0.00 0.00 4.18
2778 4827 0.036306 GAGGAGAAAAAGGGTGCGGA 59.964 55.000 0.00 0.00 0.00 5.54
2779 4828 0.036875 AGAGGAGAAAAAGGGTGCGG 59.963 55.000 0.00 0.00 0.00 5.69
2780 4829 1.160137 CAGAGGAGAAAAAGGGTGCG 58.840 55.000 0.00 0.00 0.00 5.34
2781 4830 0.884514 GCAGAGGAGAAAAAGGGTGC 59.115 55.000 0.00 0.00 0.00 5.01
2782 4831 1.539157 GGCAGAGGAGAAAAAGGGTG 58.461 55.000 0.00 0.00 0.00 4.61
2783 4832 0.036875 CGGCAGAGGAGAAAAAGGGT 59.963 55.000 0.00 0.00 0.00 4.34
2784 4833 0.324943 TCGGCAGAGGAGAAAAAGGG 59.675 55.000 0.00 0.00 0.00 3.95
2785 4834 1.443802 GTCGGCAGAGGAGAAAAAGG 58.556 55.000 0.00 0.00 0.00 3.11
2786 4835 1.071605 CGTCGGCAGAGGAGAAAAAG 58.928 55.000 0.00 0.00 34.40 2.27
2787 4836 0.949105 GCGTCGGCAGAGGAGAAAAA 60.949 55.000 10.81 0.00 39.62 1.94
2788 4837 1.374252 GCGTCGGCAGAGGAGAAAA 60.374 57.895 10.81 0.00 39.62 2.29
2789 4838 2.261671 GCGTCGGCAGAGGAGAAA 59.738 61.111 10.81 0.00 39.62 2.52
2790 4839 2.676822 AGCGTCGGCAGAGGAGAA 60.677 61.111 10.81 0.00 43.41 2.87
2791 4840 3.443925 CAGCGTCGGCAGAGGAGA 61.444 66.667 10.81 0.00 43.41 3.71
2795 4844 4.127040 AGAGCAGCGTCGGCAGAG 62.127 66.667 0.00 0.00 43.41 3.35
2796 4845 4.121669 GAGAGCAGCGTCGGCAGA 62.122 66.667 0.00 0.00 43.41 4.26
2797 4846 2.660553 CTAGAGAGCAGCGTCGGCAG 62.661 65.000 0.00 0.00 43.41 4.85
2798 4847 2.750237 TAGAGAGCAGCGTCGGCA 60.750 61.111 0.00 0.00 43.41 5.69
2799 4848 2.025441 CTAGAGAGCAGCGTCGGC 59.975 66.667 0.00 0.00 40.37 5.54
2809 4858 1.068753 CCATGTGGCGGCTAGAGAG 59.931 63.158 11.43 0.00 0.00 3.20
2810 4859 2.434843 CCCATGTGGCGGCTAGAGA 61.435 63.158 11.43 0.00 0.00 3.10
2811 4860 2.109799 CCCATGTGGCGGCTAGAG 59.890 66.667 11.43 0.00 0.00 2.43
2820 4869 0.108520 GTCTTGCAATGCCCATGTGG 60.109 55.000 1.53 0.00 37.09 4.17
2821 4870 0.108520 GGTCTTGCAATGCCCATGTG 60.109 55.000 1.53 0.00 0.00 3.21
2822 4871 0.251922 AGGTCTTGCAATGCCCATGT 60.252 50.000 13.73 0.00 0.00 3.21
2823 4872 0.458669 GAGGTCTTGCAATGCCCATG 59.541 55.000 13.73 0.00 0.00 3.66
2824 4873 0.685458 GGAGGTCTTGCAATGCCCAT 60.685 55.000 13.73 0.00 0.00 4.00
2825 4874 1.304381 GGAGGTCTTGCAATGCCCA 60.304 57.895 13.73 0.00 0.00 5.36
2826 4875 2.409870 CGGAGGTCTTGCAATGCCC 61.410 63.158 13.73 8.09 0.00 5.36
2827 4876 3.056313 GCGGAGGTCTTGCAATGCC 62.056 63.158 1.53 5.39 0.00 4.40
2828 4877 1.865788 TTGCGGAGGTCTTGCAATGC 61.866 55.000 0.00 0.00 43.13 3.56
2829 4878 2.256391 TTGCGGAGGTCTTGCAATG 58.744 52.632 0.00 0.00 43.13 2.82
2830 4879 4.819783 TTGCGGAGGTCTTGCAAT 57.180 50.000 0.00 0.00 43.13 3.56
2831 4880 1.896660 GGTTGCGGAGGTCTTGCAA 60.897 57.895 0.00 0.00 45.54 4.08
2832 4881 2.281484 GGTTGCGGAGGTCTTGCA 60.281 61.111 0.00 0.00 36.72 4.08
2833 4882 2.281484 TGGTTGCGGAGGTCTTGC 60.281 61.111 0.00 0.00 0.00 4.01
2834 4883 2.328099 GCTGGTTGCGGAGGTCTTG 61.328 63.158 0.00 0.00 0.00 3.02
2835 4884 2.032681 GCTGGTTGCGGAGGTCTT 59.967 61.111 0.00 0.00 0.00 3.01
2836 4885 3.241530 TGCTGGTTGCGGAGGTCT 61.242 61.111 0.00 0.00 46.63 3.85
2837 4886 3.050275 GTGCTGGTTGCGGAGGTC 61.050 66.667 0.00 0.00 46.63 3.85
2838 4887 3.560251 AGTGCTGGTTGCGGAGGT 61.560 61.111 0.00 0.00 46.63 3.85
2839 4888 3.052082 CAGTGCTGGTTGCGGAGG 61.052 66.667 0.00 0.00 46.63 4.30
2840 4889 3.052082 CCAGTGCTGGTTGCGGAG 61.052 66.667 9.96 0.00 45.53 4.63
2860 4909 3.423154 GTGAAAGGTGAGCGGGCG 61.423 66.667 0.00 0.00 0.00 6.13
2861 4910 3.423154 CGTGAAAGGTGAGCGGGC 61.423 66.667 0.00 0.00 0.00 6.13
2862 4911 2.742372 CCGTGAAAGGTGAGCGGG 60.742 66.667 0.00 0.00 38.86 6.13
2863 4912 3.423154 GCCGTGAAAGGTGAGCGG 61.423 66.667 0.00 0.00 44.60 5.52
2864 4913 3.777925 CGCCGTGAAAGGTGAGCG 61.778 66.667 0.00 0.00 44.18 5.03
2865 4914 2.357034 TCGCCGTGAAAGGTGAGC 60.357 61.111 0.00 0.00 44.98 4.26
2878 4927 3.636313 TTGGATGGACGACGTCGCC 62.636 63.158 35.92 33.20 44.43 5.54
2879 4928 2.126228 TTGGATGGACGACGTCGC 60.126 61.111 35.92 26.80 44.43 5.19
2880 4929 4.072913 CTTGGATGGACGACGTCG 57.927 61.111 34.58 34.58 46.33 5.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.