Multiple sequence alignment - TraesCS7A01G276200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G276200 chr7A 100.000 4531 0 0 1 4531 288875515 288880045 0.000000e+00 8368.0
1 TraesCS7A01G276200 chr7A 100.000 2090 0 0 4681 6770 288880195 288882284 0.000000e+00 3860.0
2 TraesCS7A01G276200 chr7A 100.000 508 0 0 7141 7648 288882655 288883162 0.000000e+00 939.0
3 TraesCS7A01G276200 chr7A 94.389 499 24 4 2950 3445 449709963 449710460 0.000000e+00 763.0
4 TraesCS7A01G276200 chr7A 97.183 213 4 1 5913 6125 293101194 293100984 7.300000e-95 359.0
5 TraesCS7A01G276200 chr7A 90.984 122 10 1 2744 2864 449709845 449709966 6.140000e-36 163.0
6 TraesCS7A01G276200 chr7A 91.919 99 2 2 2863 2955 692780432 692780334 4.810000e-27 134.0
7 TraesCS7A01G276200 chr7A 86.207 87 12 0 675 761 721020960 721020874 2.270000e-15 95.3
8 TraesCS7A01G276200 chr7A 96.970 33 1 0 4330 4362 644010176 644010144 1.000000e-03 56.5
9 TraesCS7A01G276200 chr7A 96.875 32 1 0 4332 4363 310418569 310418600 4.000000e-03 54.7
10 TraesCS7A01G276200 chr7D 94.970 1332 42 8 778 2107 264738332 264739640 0.000000e+00 2065.0
11 TraesCS7A01G276200 chr7D 94.984 1216 52 4 4702 5914 264743372 264744581 0.000000e+00 1899.0
12 TraesCS7A01G276200 chr7D 95.629 755 19 4 2111 2864 264739976 264740717 0.000000e+00 1199.0
13 TraesCS7A01G276200 chr7D 95.697 674 25 2 3559 4231 264741365 264742035 0.000000e+00 1081.0
14 TraesCS7A01G276200 chr7D 95.745 658 23 3 6114 6770 264744579 264745232 0.000000e+00 1055.0
15 TraesCS7A01G276200 chr7D 98.285 583 10 0 2950 3532 264740714 264741296 0.000000e+00 1022.0
16 TraesCS7A01G276200 chr7D 89.169 674 59 13 1 670 264737654 264738317 0.000000e+00 828.0
17 TraesCS7A01G276200 chr7D 90.329 486 33 9 7143 7620 264745272 264745751 6.520000e-175 625.0
18 TraesCS7A01G276200 chr7D 95.987 299 11 1 4234 4531 264742933 264743231 1.150000e-132 484.0
19 TraesCS7A01G276200 chr7D 92.157 102 1 3 2859 2953 80971094 80971195 3.720000e-28 137.0
20 TraesCS7A01G276200 chr7B 93.308 1330 52 9 792 2110 245058838 245060141 0.000000e+00 1929.0
21 TraesCS7A01G276200 chr7B 94.326 1216 60 4 4702 5914 245062676 245063885 0.000000e+00 1855.0
22 TraesCS7A01G276200 chr7B 96.107 976 32 4 3559 4531 245061560 245062532 0.000000e+00 1587.0
23 TraesCS7A01G276200 chr7B 93.775 755 22 10 2111 2864 245060182 245060912 0.000000e+00 1110.0
24 TraesCS7A01G276200 chr7B 98.971 583 6 0 2950 3532 245060909 245061491 0.000000e+00 1044.0
25 TraesCS7A01G276200 chr7B 93.788 660 35 4 6114 6770 245063883 245064539 0.000000e+00 987.0
26 TraesCS7A01G276200 chr7B 98.039 204 3 1 5914 6117 187630770 187630568 3.390000e-93 353.0
27 TraesCS7A01G276200 chr7B 91.057 246 20 1 7143 7388 245064580 245064823 1.590000e-86 331.0
28 TraesCS7A01G276200 chr7B 91.429 105 2 2 2863 2960 588875013 588874909 3.720000e-28 137.0
29 TraesCS7A01G276200 chr7B 91.176 102 3 1 2859 2954 562993166 562993065 4.810000e-27 134.0
30 TraesCS7A01G276200 chr5A 94.188 499 25 4 2950 3445 641406404 641406901 0.000000e+00 758.0
31 TraesCS7A01G276200 chr5A 84.227 634 77 15 1 631 2116561 2115948 5.110000e-166 595.0
32 TraesCS7A01G276200 chr5A 99.500 200 1 0 5914 6113 261539209 261539010 1.570000e-96 364.0
33 TraesCS7A01G276200 chr5A 97.549 204 5 0 5910 6113 46250758 46250961 4.390000e-92 350.0
34 TraesCS7A01G276200 chr5A 75.179 419 80 18 3128 3532 550643616 550644024 7.890000e-40 176.0
35 TraesCS7A01G276200 chr5A 90.984 122 10 1 2744 2864 641406286 641406407 6.140000e-36 163.0
36 TraesCS7A01G276200 chr5A 100.000 30 0 0 4329 4358 482391020 482390991 1.000000e-03 56.5
37 TraesCS7A01G276200 chr4A 87.217 618 64 12 1 613 675964844 675965451 0.000000e+00 689.0
38 TraesCS7A01G276200 chr4A 93.478 92 6 0 2862 2953 236122217 236122126 3.720000e-28 137.0
39 TraesCS7A01G276200 chr6B 86.201 587 71 10 1 582 693041617 693041036 1.810000e-175 627.0
40 TraesCS7A01G276200 chr6B 97.872 94 2 0 671 764 555210765 555210858 6.140000e-36 163.0
41 TraesCS7A01G276200 chr5D 86.225 559 63 13 1 553 238134808 238134258 1.840000e-165 593.0
42 TraesCS7A01G276200 chr5D 90.291 103 4 1 2859 2955 521371681 521371579 6.230000e-26 130.0
43 TraesCS7A01G276200 chr5D 100.000 29 0 0 4330 4358 113382310 113382338 4.000000e-03 54.7
44 TraesCS7A01G276200 chr5B 85.689 573 67 9 1 570 4544612 4545172 2.380000e-164 590.0
45 TraesCS7A01G276200 chr5B 97.087 206 6 0 5912 6117 251568507 251568712 1.580000e-91 348.0
46 TraesCS7A01G276200 chr5B 75.181 415 80 19 3128 3529 530231021 530231425 2.840000e-39 174.0
47 TraesCS7A01G276200 chr5B 90.476 105 3 2 2855 2953 693583795 693583898 1.730000e-26 132.0
48 TraesCS7A01G276200 chr3A 83.245 567 84 11 10 570 655536971 655537532 1.900000e-140 510.0
49 TraesCS7A01G276200 chr3A 94.884 215 11 0 5914 6128 547947142 547946928 3.420000e-88 337.0
50 TraesCS7A01G276200 chr3A 79.618 157 21 8 3963 4116 57228374 57228522 1.360000e-17 102.0
51 TraesCS7A01G276200 chr6D 80.936 577 91 17 1 570 404615154 404615718 9.110000e-119 438.0
52 TraesCS7A01G276200 chr6D 94.792 96 5 0 671 766 370799731 370799636 4.780000e-32 150.0
53 TraesCS7A01G276200 chr2D 80.104 578 101 13 1 570 4595057 4595628 1.190000e-112 418.0
54 TraesCS7A01G276200 chr2D 94.624 93 5 0 671 763 323391733 323391641 2.220000e-30 145.0
55 TraesCS7A01G276200 chr2D 93.548 93 6 0 671 763 323966244 323966152 1.030000e-28 139.0
56 TraesCS7A01G276200 chr3B 99.024 205 1 1 5913 6117 553623591 553623388 4.360000e-97 366.0
57 TraesCS7A01G276200 chr3B 100.000 30 0 0 4330 4359 8013463 8013434 1.000000e-03 56.5
58 TraesCS7A01G276200 chr2A 97.196 214 3 3 5905 6117 418820240 418820029 7.300000e-95 359.0
59 TraesCS7A01G276200 chr2B 97.073 205 4 2 5912 6116 250063185 250062983 2.040000e-90 344.0
60 TraesCS7A01G276200 chr1A 93.636 110 6 1 672 781 574814037 574813929 6.140000e-36 163.0
61 TraesCS7A01G276200 chr4D 89.815 108 3 2 2856 2955 494042477 494042370 1.730000e-26 132.0
62 TraesCS7A01G276200 chr6A 90.385 104 3 2 2856 2953 596589343 596589445 6.230000e-26 130.0
63 TraesCS7A01G276200 chr1B 100.000 33 0 0 4329 4361 419200599 419200631 2.300000e-05 62.1
64 TraesCS7A01G276200 chr1D 100.000 30 0 0 4330 4359 3763746 3763717 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G276200 chr7A 288875515 288883162 7647 False 4389.000000 8368 100.000000 1 7648 3 chr7A.!!$F2 7647
1 TraesCS7A01G276200 chr7A 449709845 449710460 615 False 463.000000 763 92.686500 2744 3445 2 chr7A.!!$F3 701
2 TraesCS7A01G276200 chr7D 264737654 264745751 8097 False 1139.777778 2065 94.532778 1 7620 9 chr7D.!!$F2 7619
3 TraesCS7A01G276200 chr7B 245058838 245064823 5985 False 1263.285714 1929 94.476000 792 7388 7 chr7B.!!$F1 6596
4 TraesCS7A01G276200 chr5A 2115948 2116561 613 True 595.000000 595 84.227000 1 631 1 chr5A.!!$R1 630
5 TraesCS7A01G276200 chr5A 641406286 641406901 615 False 460.500000 758 92.586000 2744 3445 2 chr5A.!!$F3 701
6 TraesCS7A01G276200 chr4A 675964844 675965451 607 False 689.000000 689 87.217000 1 613 1 chr4A.!!$F1 612
7 TraesCS7A01G276200 chr6B 693041036 693041617 581 True 627.000000 627 86.201000 1 582 1 chr6B.!!$R1 581
8 TraesCS7A01G276200 chr5D 238134258 238134808 550 True 593.000000 593 86.225000 1 553 1 chr5D.!!$R1 552
9 TraesCS7A01G276200 chr5B 4544612 4545172 560 False 590.000000 590 85.689000 1 570 1 chr5B.!!$F1 569
10 TraesCS7A01G276200 chr3A 655536971 655537532 561 False 510.000000 510 83.245000 10 570 1 chr3A.!!$F2 560
11 TraesCS7A01G276200 chr6D 404615154 404615718 564 False 438.000000 438 80.936000 1 570 1 chr6D.!!$F1 569
12 TraesCS7A01G276200 chr2D 4595057 4595628 571 False 418.000000 418 80.104000 1 570 1 chr2D.!!$F1 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
801 822 1.293924 CGACCTACGGACACGAGTAT 58.706 55.000 0.00 0.0 44.60 2.12 F
1128 1161 1.226435 CACGCTGCTCTACGTCTCC 60.226 63.158 0.00 0.0 41.32 3.71 F
2879 3252 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.0 0.00 3.28 F
2880 3253 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.0 0.00 2.44 F
2881 3254 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.0 0.00 1.82 F
2882 3255 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.0 0.00 1.40 F
4800 6145 0.238289 AAGCATTCGACAGCCAAACG 59.762 50.000 4.76 0.0 0.00 3.60 F
5954 7303 0.121197 TCTCCCAGAATTGACCCCCT 59.879 55.000 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1621 1659 0.842635 AGGGAGCTCAGCCAAATAGG 59.157 55.000 17.19 0.0 41.84 2.57 R
2937 3310 0.111832 ACACTACTCACTCCGTCCCA 59.888 55.000 0.00 0.0 0.00 4.37 R
4680 5996 0.179040 GACGGACCAACAACCAAGGA 60.179 55.000 0.00 0.0 0.00 3.36 R
4681 5997 0.464735 TGACGGACCAACAACCAAGG 60.465 55.000 0.00 0.0 0.00 3.61 R
4755 6100 1.330521 CGATCAAAACGCATCCGGAAT 59.669 47.619 9.01 0.0 39.22 3.01 R
4856 6202 1.480954 GGGTAGATTCTCGCCTGAACA 59.519 52.381 0.00 0.0 0.00 3.18 R
5963 7312 0.039618 GAAGTGGCAATTCTGGGGGA 59.960 55.000 19.51 0.0 0.00 4.81 R
7299 8653 0.528924 GATGTGCTGCTCAAATGCCA 59.471 50.000 8.59 0.0 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 131 6.606395 TCGCTTAGATAGAACTCTTTTAGGGT 59.394 38.462 0.00 0.00 0.00 4.34
203 210 7.462571 AAGGGATTTTGTGTTCTATACAACC 57.537 36.000 0.00 0.00 38.80 3.77
204 211 5.646360 AGGGATTTTGTGTTCTATACAACCG 59.354 40.000 0.00 0.00 38.80 4.44
207 215 6.349033 GGATTTTGTGTTCTATACAACCGCTT 60.349 38.462 0.00 0.00 38.80 4.68
216 224 1.847798 TACAACCGCTTGCCCCAGAT 61.848 55.000 0.00 0.00 0.00 2.90
222 230 2.092103 ACCGCTTGCCCCAGATAAAATA 60.092 45.455 0.00 0.00 0.00 1.40
240 248 6.759497 AAAATAGACACAACTTCCTATGGC 57.241 37.500 0.00 0.00 0.00 4.40
371 379 3.307059 GCTAGGTCAAGGTGAGACACATT 60.307 47.826 0.00 0.00 38.95 2.71
523 541 2.461695 AGTCCCTTGTCTCATCGTGAT 58.538 47.619 0.00 0.00 0.00 3.06
619 640 2.359214 TCCTTTGCAACGCACAAACATA 59.641 40.909 0.00 0.00 38.71 2.29
620 641 2.470999 CCTTTGCAACGCACAAACATAC 59.529 45.455 0.00 0.00 38.71 2.39
621 642 3.371168 CTTTGCAACGCACAAACATACT 58.629 40.909 0.00 0.00 38.71 2.12
635 656 7.754924 GCACAAACATACTATTTGCTATTGTGT 59.245 33.333 14.06 0.00 44.10 3.72
657 678 4.387862 GTGATAAACTACAGACACGGTTGG 59.612 45.833 0.00 0.00 0.00 3.77
670 691 2.225491 CACGGTTGGTCGATGATTTTGT 59.775 45.455 0.00 0.00 0.00 2.83
671 692 2.882137 ACGGTTGGTCGATGATTTTGTT 59.118 40.909 0.00 0.00 0.00 2.83
672 693 3.058501 ACGGTTGGTCGATGATTTTGTTC 60.059 43.478 0.00 0.00 0.00 3.18
673 694 3.058570 CGGTTGGTCGATGATTTTGTTCA 60.059 43.478 0.00 0.00 0.00 3.18
676 697 5.572896 GGTTGGTCGATGATTTTGTTCATTC 59.427 40.000 0.00 0.00 36.48 2.67
677 698 5.956068 TGGTCGATGATTTTGTTCATTCA 57.044 34.783 0.00 0.00 36.48 2.57
678 699 5.941733 TGGTCGATGATTTTGTTCATTCAG 58.058 37.500 0.00 0.00 36.48 3.02
679 700 5.106197 TGGTCGATGATTTTGTTCATTCAGG 60.106 40.000 0.00 0.00 36.48 3.86
680 701 5.335127 GTCGATGATTTTGTTCATTCAGGG 58.665 41.667 0.00 0.00 36.48 4.45
681 702 4.107622 CGATGATTTTGTTCATTCAGGGC 58.892 43.478 0.00 0.00 36.48 5.19
682 703 3.959535 TGATTTTGTTCATTCAGGGCC 57.040 42.857 0.00 0.00 0.00 5.80
683 704 3.237746 TGATTTTGTTCATTCAGGGCCA 58.762 40.909 6.18 0.00 0.00 5.36
684 705 3.258872 TGATTTTGTTCATTCAGGGCCAG 59.741 43.478 6.18 0.00 0.00 4.85
685 706 2.673775 TTTGTTCATTCAGGGCCAGA 57.326 45.000 6.18 0.00 0.00 3.86
686 707 2.905415 TTGTTCATTCAGGGCCAGAT 57.095 45.000 6.18 0.00 0.00 2.90
687 708 2.133281 TGTTCATTCAGGGCCAGATG 57.867 50.000 6.18 6.89 0.00 2.90
688 709 1.634973 TGTTCATTCAGGGCCAGATGA 59.365 47.619 6.18 9.34 0.00 2.92
689 710 2.242965 TGTTCATTCAGGGCCAGATGAT 59.757 45.455 6.18 0.00 0.00 2.45
690 711 3.294214 GTTCATTCAGGGCCAGATGATT 58.706 45.455 6.18 0.00 0.00 2.57
691 712 3.675348 TCATTCAGGGCCAGATGATTT 57.325 42.857 6.18 0.00 0.00 2.17
692 713 4.794311 TCATTCAGGGCCAGATGATTTA 57.206 40.909 6.18 0.00 0.00 1.40
693 714 4.464008 TCATTCAGGGCCAGATGATTTAC 58.536 43.478 6.18 0.00 0.00 2.01
694 715 2.620251 TCAGGGCCAGATGATTTACG 57.380 50.000 6.18 0.00 0.00 3.18
695 716 1.837439 TCAGGGCCAGATGATTTACGT 59.163 47.619 6.18 0.00 0.00 3.57
696 717 3.035363 TCAGGGCCAGATGATTTACGTA 58.965 45.455 6.18 0.00 0.00 3.57
697 718 3.646162 TCAGGGCCAGATGATTTACGTAT 59.354 43.478 6.18 0.00 0.00 3.06
698 719 3.748048 CAGGGCCAGATGATTTACGTATG 59.252 47.826 6.18 0.00 0.00 2.39
699 720 3.646162 AGGGCCAGATGATTTACGTATGA 59.354 43.478 6.18 0.00 0.00 2.15
700 721 4.287067 AGGGCCAGATGATTTACGTATGAT 59.713 41.667 6.18 0.00 0.00 2.45
701 722 5.003804 GGGCCAGATGATTTACGTATGATT 58.996 41.667 4.39 0.00 0.00 2.57
702 723 5.473504 GGGCCAGATGATTTACGTATGATTT 59.526 40.000 4.39 0.00 0.00 2.17
703 724 6.373779 GGCCAGATGATTTACGTATGATTTG 58.626 40.000 0.00 0.00 0.00 2.32
704 725 6.017109 GGCCAGATGATTTACGTATGATTTGT 60.017 38.462 0.00 0.00 0.00 2.83
705 726 6.852853 GCCAGATGATTTACGTATGATTTGTG 59.147 38.462 0.00 0.00 0.00 3.33
706 727 7.254761 GCCAGATGATTTACGTATGATTTGTGA 60.255 37.037 0.00 0.00 0.00 3.58
707 728 8.611757 CCAGATGATTTACGTATGATTTGTGAA 58.388 33.333 0.00 0.00 0.00 3.18
708 729 9.986833 CAGATGATTTACGTATGATTTGTGAAA 57.013 29.630 0.00 0.00 0.00 2.69
711 732 8.648422 TGATTTACGTATGATTTGTGAAAACG 57.352 30.769 0.00 0.00 35.17 3.60
712 733 8.496751 TGATTTACGTATGATTTGTGAAAACGA 58.503 29.630 0.00 0.00 33.40 3.85
713 734 8.874745 ATTTACGTATGATTTGTGAAAACGAG 57.125 30.769 0.00 0.00 33.40 4.18
714 735 5.917541 ACGTATGATTTGTGAAAACGAGT 57.082 34.783 0.00 0.00 33.40 4.18
715 736 5.675970 ACGTATGATTTGTGAAAACGAGTG 58.324 37.500 0.00 0.00 33.40 3.51
716 737 5.235616 ACGTATGATTTGTGAAAACGAGTGT 59.764 36.000 0.00 0.00 33.40 3.55
717 738 6.421501 ACGTATGATTTGTGAAAACGAGTGTA 59.578 34.615 0.00 0.00 33.40 2.90
718 739 7.042590 ACGTATGATTTGTGAAAACGAGTGTAA 60.043 33.333 0.00 0.00 33.40 2.41
719 740 7.955324 CGTATGATTTGTGAAAACGAGTGTAAT 59.045 33.333 0.00 0.00 0.00 1.89
720 741 9.051027 GTATGATTTGTGAAAACGAGTGTAATG 57.949 33.333 0.00 0.00 0.00 1.90
721 742 7.252965 TGATTTGTGAAAACGAGTGTAATGA 57.747 32.000 0.00 0.00 0.00 2.57
722 743 7.129622 TGATTTGTGAAAACGAGTGTAATGAC 58.870 34.615 0.00 0.00 0.00 3.06
723 744 6.424176 TTTGTGAAAACGAGTGTAATGACA 57.576 33.333 0.00 0.00 0.00 3.58
724 745 6.612247 TTGTGAAAACGAGTGTAATGACAT 57.388 33.333 0.00 0.00 38.04 3.06
725 746 6.612247 TGTGAAAACGAGTGTAATGACATT 57.388 33.333 5.87 5.87 38.04 2.71
726 747 7.716768 TGTGAAAACGAGTGTAATGACATTA 57.283 32.000 3.68 3.68 38.04 1.90
727 748 7.569297 TGTGAAAACGAGTGTAATGACATTAC 58.431 34.615 25.21 25.21 44.13 1.89
728 749 7.439955 TGTGAAAACGAGTGTAATGACATTACT 59.560 33.333 29.42 18.16 44.17 2.24
729 750 8.280497 GTGAAAACGAGTGTAATGACATTACTT 58.720 33.333 29.42 20.96 44.17 2.24
730 751 9.478768 TGAAAACGAGTGTAATGACATTACTTA 57.521 29.630 29.42 14.53 44.17 2.24
733 754 9.485206 AAACGAGTGTAATGACATTACTTAACT 57.515 29.630 29.42 25.09 44.17 2.24
754 775 7.941795 AACTAATATATTCTCGTTTCACCCG 57.058 36.000 0.00 0.00 0.00 5.28
755 776 5.924825 ACTAATATATTCTCGTTTCACCCGC 59.075 40.000 0.00 0.00 0.00 6.13
756 777 2.684001 ATATTCTCGTTTCACCCGCA 57.316 45.000 0.00 0.00 0.00 5.69
757 778 2.459060 TATTCTCGTTTCACCCGCAA 57.541 45.000 0.00 0.00 0.00 4.85
758 779 1.600023 ATTCTCGTTTCACCCGCAAA 58.400 45.000 0.00 0.00 0.00 3.68
759 780 1.380524 TTCTCGTTTCACCCGCAAAA 58.619 45.000 0.00 0.00 0.00 2.44
760 781 1.380524 TCTCGTTTCACCCGCAAAAA 58.619 45.000 0.00 0.00 0.00 1.94
800 821 1.361668 GCGACCTACGGACACGAGTA 61.362 60.000 0.00 0.00 44.60 2.59
801 822 1.293924 CGACCTACGGACACGAGTAT 58.706 55.000 0.00 0.00 44.60 2.12
814 835 5.573669 GGACACGAGTATCAGAAAAGAAGAC 59.426 44.000 0.00 0.00 33.17 3.01
900 921 3.572682 AGTTCGAACACACTACTGATCCA 59.427 43.478 28.78 0.00 0.00 3.41
927 948 2.887568 CATGTCGCCGCTGTCTCC 60.888 66.667 0.00 0.00 0.00 3.71
986 1007 1.739049 CTGCCCTGAGATCTCCGTC 59.261 63.158 20.03 8.20 0.00 4.79
1042 1063 4.887190 GCCACAACCACCACCCGT 62.887 66.667 0.00 0.00 0.00 5.28
1043 1064 2.904866 CCACAACCACCACCCGTG 60.905 66.667 0.00 0.00 42.62 4.94
1044 1065 3.591835 CACAACCACCACCCGTGC 61.592 66.667 0.00 0.00 41.53 5.34
1045 1066 4.887190 ACAACCACCACCCGTGCC 62.887 66.667 0.00 0.00 41.53 5.01
1128 1161 1.226435 CACGCTGCTCTACGTCTCC 60.226 63.158 0.00 0.00 41.32 3.71
1254 1288 4.034626 CACATCTCTCGATCTAACTCGTGT 59.965 45.833 0.00 0.00 39.62 4.49
1385 1422 4.577834 AGATTAAGCGAGCTAGTTCCTC 57.422 45.455 0.00 0.00 0.00 3.71
1418 1456 5.527214 CAGTATTCACCCAATCGATTTAGCA 59.473 40.000 8.21 0.00 0.00 3.49
1421 1459 5.913137 TTCACCCAATCGATTTAGCATTT 57.087 34.783 8.21 0.00 0.00 2.32
1424 1462 6.353323 TCACCCAATCGATTTAGCATTTAGA 58.647 36.000 8.21 0.00 0.00 2.10
1443 1481 6.899393 TTAGAGAACCAAATCAATTGCACT 57.101 33.333 0.00 0.00 37.73 4.40
1444 1482 5.796424 AGAGAACCAAATCAATTGCACTT 57.204 34.783 0.00 0.00 37.73 3.16
1445 1483 5.535333 AGAGAACCAAATCAATTGCACTTG 58.465 37.500 10.37 10.37 37.73 3.16
1446 1484 4.060205 AGAACCAAATCAATTGCACTTGC 58.940 39.130 11.69 0.00 37.73 4.01
1533 1571 3.997021 CTGTCTTTGTAGCCAATCGTTCT 59.003 43.478 0.00 0.00 0.00 3.01
1556 1594 9.685828 TTCTGTTTATGTGGTTATTGCTTTAAC 57.314 29.630 1.99 1.99 0.00 2.01
1572 1610 6.591935 TGCTTTAACTGGGAGATATAAGTGG 58.408 40.000 0.00 0.00 0.00 4.00
1616 1654 7.540745 GTGCCATTGTAAGTAAATTAGTTGGTG 59.459 37.037 3.49 0.00 0.00 4.17
1660 1698 8.207545 GCTCCCTTTCTATCTTATTTCAGAAGA 58.792 37.037 0.00 0.00 37.34 2.87
1729 1767 5.469084 GGGTTTGTAGAGGTGTGAGTTAAAG 59.531 44.000 0.00 0.00 0.00 1.85
1893 1931 0.954452 CTGCAGAAAGGTGGTTGGAC 59.046 55.000 8.42 0.00 0.00 4.02
2013 2052 8.696043 CCATAGATGGTTGATTAGAATTTCCA 57.304 34.615 0.00 0.00 43.05 3.53
2185 2556 7.484641 CGTTATTTGATGATTGTTACAAGTGGG 59.515 37.037 3.63 0.00 0.00 4.61
2429 2800 6.239858 CCAAAATACCAAGGGTTCTTTTCCAT 60.240 38.462 0.00 0.00 37.09 3.41
2611 2983 3.242381 GCAACTTGCTTGCGTTTTTGAAT 60.242 39.130 6.50 0.00 45.88 2.57
2688 3060 5.645056 TCCCACATATCCAGAATTAAGCA 57.355 39.130 0.00 0.00 0.00 3.91
2864 3237 1.885233 GGCACCTCCCGAGTATAGTAC 59.115 57.143 0.00 0.00 0.00 2.73
2865 3238 2.488710 GGCACCTCCCGAGTATAGTACT 60.489 54.545 0.00 0.00 42.86 2.73
2875 3248 3.786368 AGTATAGTACTCCCTCCGTCC 57.214 52.381 0.00 0.00 32.47 4.79
2876 3249 2.374839 AGTATAGTACTCCCTCCGTCCC 59.625 54.545 0.00 0.00 32.47 4.46
2877 3250 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
2878 3251 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
2879 3252 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2880 3253 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2881 3254 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2882 3255 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2883 3256 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2884 3257 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2885 3258 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2886 3259 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2887 3260 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2888 3261 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2889 3262 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2890 3263 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2891 3264 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2892 3265 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2893 3266 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2894 3267 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
2895 3268 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
2896 3269 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
2897 3270 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
2898 3271 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
2899 3272 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
2900 3273 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
2901 3274 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
2925 3298 9.991906 ACTAATACAAAGTTGTACTAAGCTTGA 57.008 29.630 9.86 0.00 45.47 3.02
2928 3301 6.846325 ACAAAGTTGTACTAAGCTTGAGAC 57.154 37.500 9.86 4.39 40.16 3.36
2929 3302 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
2930 3303 6.480320 ACAAAGTTGTACTAAGCTTGAGACAG 59.520 38.462 9.86 0.00 40.16 3.51
2931 3304 5.793030 AGTTGTACTAAGCTTGAGACAGT 57.207 39.130 9.86 6.64 0.00 3.55
2932 3305 6.163135 AGTTGTACTAAGCTTGAGACAGTT 57.837 37.500 9.86 0.08 0.00 3.16
2933 3306 7.286215 AGTTGTACTAAGCTTGAGACAGTTA 57.714 36.000 9.86 0.00 0.00 2.24
2934 3307 7.897864 AGTTGTACTAAGCTTGAGACAGTTAT 58.102 34.615 9.86 0.00 0.00 1.89
2935 3308 8.368668 AGTTGTACTAAGCTTGAGACAGTTATT 58.631 33.333 9.86 0.00 0.00 1.40
2936 3309 8.989980 GTTGTACTAAGCTTGAGACAGTTATTT 58.010 33.333 9.86 0.00 0.00 1.40
2937 3310 9.555727 TTGTACTAAGCTTGAGACAGTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
2938 3311 8.988934 TGTACTAAGCTTGAGACAGTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
2939 3312 7.440523 ACTAAGCTTGAGACAGTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
2940 3313 5.712152 AAGCTTGAGACAGTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
2941 3314 4.985538 AGCTTGAGACAGTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
2942 3315 4.762251 AGCTTGAGACAGTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
2943 3316 4.378459 GCTTGAGACAGTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
2944 3317 3.670625 TGAGACAGTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2945 3318 3.325425 TGAGACAGTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2946 3319 3.933332 GAGACAGTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
3007 3381 6.690530 TGAGGTCTCTGCAATTTTATTTTGG 58.309 36.000 0.00 0.00 0.00 3.28
3021 3395 9.696917 AATTTTATTTTGGAAGTGAGTAAGCTG 57.303 29.630 0.00 0.00 0.00 4.24
3123 3499 9.686683 ATAACTATGCCCATTATCCTGATTAAC 57.313 33.333 0.00 0.00 0.00 2.01
3184 3560 5.980116 TGCACGTATTTTAAATGCAACACTT 59.020 32.000 10.24 0.00 43.00 3.16
3540 3916 8.396272 AGAAACATGTAAGTATTTGCTCAACT 57.604 30.769 0.00 0.00 0.00 3.16
3541 3917 8.850156 AGAAACATGTAAGTATTTGCTCAACTT 58.150 29.630 0.00 0.00 37.27 2.66
3552 3928 8.840321 AGTATTTGCTCAACTTATTTATCGCAT 58.160 29.630 0.00 0.00 0.00 4.73
3555 3931 7.786178 TTGCTCAACTTATTTATCGCATACT 57.214 32.000 0.00 0.00 0.00 2.12
3557 3933 6.143919 TGCTCAACTTATTTATCGCATACTCG 59.856 38.462 0.00 0.00 0.00 4.18
3559 3935 7.389603 TCAACTTATTTATCGCATACTCGTG 57.610 36.000 0.00 0.00 0.00 4.35
3560 3936 5.824243 ACTTATTTATCGCATACTCGTGC 57.176 39.130 0.00 0.00 41.65 5.34
3590 4009 7.396907 TCATTTGGATGGTATGAACTGTGAAAT 59.603 33.333 0.00 0.00 33.93 2.17
3595 4014 7.125659 TGGATGGTATGAACTGTGAAATAGAGA 59.874 37.037 0.00 0.00 0.00 3.10
3642 4061 4.788075 AGGCCCCAATAGTACATATGCATA 59.212 41.667 9.27 9.27 0.00 3.14
3736 4155 5.070580 GGAGCACTAGGACAATAGGTTATGT 59.929 44.000 0.00 0.00 0.00 2.29
3743 4162 9.026121 ACTAGGACAATAGGTTATGTAGCTATG 57.974 37.037 0.00 0.00 44.66 2.23
3785 4204 3.872696 ACAACCTGCGTGATCATATTGA 58.127 40.909 0.00 0.00 0.00 2.57
3812 4231 2.503895 AATGACTTCTTCTGCTGGGG 57.496 50.000 0.00 0.00 0.00 4.96
3922 4341 8.519526 AGTTGTTTTTGTGACAATGTAAGAGAA 58.480 29.630 0.00 0.00 39.03 2.87
4139 4558 3.376935 AATGCGGGAGAGGAGCACG 62.377 63.158 0.00 0.00 44.12 5.34
4169 4588 3.347216 TGCTCTTCATTTAAGGTGCTCC 58.653 45.455 0.00 0.00 36.61 4.70
4181 4600 2.962859 AGGTGCTCCCACTTCAAATTT 58.037 42.857 0.00 0.00 41.75 1.82
4213 4632 4.986034 CAGCTCACATTTTTCTTTGATGCA 59.014 37.500 0.00 0.00 0.00 3.96
4231 4650 5.942236 TGATGCAAAGTGAGAGAAAGCTTAT 59.058 36.000 0.00 0.00 0.00 1.73
4232 4651 5.869753 TGCAAAGTGAGAGAAAGCTTATC 57.130 39.130 0.00 0.86 0.00 1.75
4382 5697 5.163814 GGTTATCTCATTCTGTGCTGTGAAC 60.164 44.000 0.00 0.00 0.00 3.18
4405 5720 7.783090 ACAGCATAGTTTGATATGAGTCAAG 57.217 36.000 0.00 0.00 39.13 3.02
4430 5745 3.008049 AGTTTAGAGCACAAGGATCGGTT 59.992 43.478 0.00 0.00 36.90 4.44
4431 5746 4.222145 AGTTTAGAGCACAAGGATCGGTTA 59.778 41.667 0.00 0.00 36.90 2.85
4755 6100 2.144078 TTCAACGTCCTCAGGCCCA 61.144 57.895 0.00 0.00 0.00 5.36
4765 6110 2.908940 CAGGCCCATTCCGGATGC 60.909 66.667 4.15 6.08 36.56 3.91
4800 6145 0.238289 AAGCATTCGACAGCCAAACG 59.762 50.000 4.76 0.00 0.00 3.60
4818 6163 2.420138 GCCTCTGGCTCTGATCGTA 58.580 57.895 0.73 0.00 46.69 3.43
4819 6164 0.313672 GCCTCTGGCTCTGATCGTAG 59.686 60.000 0.73 0.00 46.69 3.51
4821 6166 0.313672 CTCTGGCTCTGATCGTAGGC 59.686 60.000 12.23 12.23 38.68 3.93
4856 6202 3.285484 CATTTAGTGGAGATGCAAGCCT 58.715 45.455 0.00 0.00 0.00 4.58
4908 6254 0.466555 TGCTAAAACGCTTGGTGGGT 60.467 50.000 0.00 0.00 44.07 4.51
4942 6288 0.529773 TCGCACGCTTCTCTTTGTGT 60.530 50.000 0.00 0.00 34.86 3.72
4946 6292 1.331756 CACGCTTCTCTTTGTGTGCTT 59.668 47.619 0.00 0.00 37.77 3.91
4947 6293 1.599542 ACGCTTCTCTTTGTGTGCTTC 59.400 47.619 0.00 0.00 0.00 3.86
4956 6302 4.152647 TCTTTGTGTGCTTCTCCTCTCTA 58.847 43.478 0.00 0.00 0.00 2.43
4966 6312 2.360844 TCTCCTCTCTACTGTTCGCTG 58.639 52.381 0.00 0.00 0.00 5.18
4995 6341 7.997803 AGGGGAAAAATCAATTGAAAATGAACA 59.002 29.630 13.09 0.00 0.00 3.18
5010 6356 3.137385 AACAGGCTGCTGCTCCCAA 62.137 57.895 15.89 0.00 39.59 4.12
5048 6395 3.074412 TCCTCACTTCAGGAAAAATCGC 58.926 45.455 0.00 0.00 39.83 4.58
5123 6471 4.284490 TCCTCTGTATATTTGGCTGCTAGG 59.716 45.833 0.00 0.00 0.00 3.02
5164 6512 4.699925 ACTTGGCTAGTGAAGTAAACCA 57.300 40.909 0.00 0.00 35.19 3.67
5165 6513 4.386711 ACTTGGCTAGTGAAGTAAACCAC 58.613 43.478 0.00 0.00 35.19 4.16
5166 6514 4.102681 ACTTGGCTAGTGAAGTAAACCACT 59.897 41.667 0.00 0.00 44.81 4.00
5167 6515 5.306160 ACTTGGCTAGTGAAGTAAACCACTA 59.694 40.000 0.00 0.00 42.86 2.74
5168 6516 6.013639 ACTTGGCTAGTGAAGTAAACCACTAT 60.014 38.462 0.00 0.00 42.76 2.12
5199 6548 5.106038 TGTCTCCATCAGCAAATGTGATTTC 60.106 40.000 0.00 0.00 32.06 2.17
5226 6575 6.280643 GCCCTACTTCTCAAAACAAAAATGT 58.719 36.000 0.00 0.00 0.00 2.71
5230 6579 9.450807 CCTACTTCTCAAAACAAAAATGTACTG 57.549 33.333 0.00 0.00 0.00 2.74
5378 6727 3.555586 GCTACTACGGTGGTGGAGAAAAA 60.556 47.826 12.03 0.00 0.00 1.94
5714 7063 8.454106 CCAATCTTCATACCAAAGAAACAGTAG 58.546 37.037 0.00 0.00 36.41 2.57
5725 7074 6.211515 CAAAGAAACAGTAGCAAGCAAAGAT 58.788 36.000 0.00 0.00 0.00 2.40
5794 7143 4.771590 TTTCATTGTCTGTGATGGAAGC 57.228 40.909 0.00 0.00 0.00 3.86
5914 7263 7.374975 TGGTTTTCCTTGTATAGGGATCTAG 57.625 40.000 0.00 0.00 44.86 2.43
5915 7264 6.329197 TGGTTTTCCTTGTATAGGGATCTAGG 59.671 42.308 0.00 0.00 44.86 3.02
5916 7265 6.239915 GGTTTTCCTTGTATAGGGATCTAGGG 60.240 46.154 0.00 0.00 44.86 3.53
5917 7266 4.062490 TCCTTGTATAGGGATCTAGGGC 57.938 50.000 0.00 0.00 44.86 5.19
5918 7267 3.108376 CCTTGTATAGGGATCTAGGGCC 58.892 54.545 0.00 0.00 40.67 5.80
5919 7268 3.504156 CCTTGTATAGGGATCTAGGGCCA 60.504 52.174 6.18 0.00 40.67 5.36
5920 7269 3.474798 TGTATAGGGATCTAGGGCCAG 57.525 52.381 6.18 0.85 0.00 4.85
5921 7270 2.728013 TGTATAGGGATCTAGGGCCAGT 59.272 50.000 6.18 0.00 0.00 4.00
5922 7271 3.144125 TGTATAGGGATCTAGGGCCAGTT 59.856 47.826 6.18 0.00 0.00 3.16
5923 7272 2.400467 TAGGGATCTAGGGCCAGTTC 57.600 55.000 6.18 5.95 0.00 3.01
5924 7273 0.644937 AGGGATCTAGGGCCAGTTCT 59.355 55.000 6.18 0.00 0.00 3.01
5925 7274 1.010170 AGGGATCTAGGGCCAGTTCTT 59.990 52.381 6.18 0.00 0.00 2.52
5926 7275 1.847088 GGGATCTAGGGCCAGTTCTTT 59.153 52.381 6.18 0.00 0.00 2.52
5927 7276 2.242452 GGGATCTAGGGCCAGTTCTTTT 59.758 50.000 6.18 0.00 0.00 2.27
5928 7277 3.282885 GGATCTAGGGCCAGTTCTTTTG 58.717 50.000 6.18 0.00 0.00 2.44
5929 7278 2.879103 TCTAGGGCCAGTTCTTTTGG 57.121 50.000 6.18 0.00 38.78 3.28
5930 7279 1.354368 TCTAGGGCCAGTTCTTTTGGG 59.646 52.381 6.18 0.00 36.19 4.12
5935 7284 2.549064 GCCAGTTCTTTTGGGCAATT 57.451 45.000 0.00 0.00 45.70 2.32
5936 7285 2.416747 GCCAGTTCTTTTGGGCAATTC 58.583 47.619 0.00 0.00 45.70 2.17
5937 7286 2.037641 GCCAGTTCTTTTGGGCAATTCT 59.962 45.455 0.00 0.00 45.70 2.40
5938 7287 3.862264 GCCAGTTCTTTTGGGCAATTCTC 60.862 47.826 0.00 0.00 45.70 2.87
5939 7288 3.306294 CCAGTTCTTTTGGGCAATTCTCC 60.306 47.826 0.00 0.00 31.87 3.71
5940 7289 2.899900 AGTTCTTTTGGGCAATTCTCCC 59.100 45.455 5.52 5.52 44.17 4.30
5953 7302 0.999712 TTCTCCCAGAATTGACCCCC 59.000 55.000 0.00 0.00 0.00 5.40
5954 7303 0.121197 TCTCCCAGAATTGACCCCCT 59.879 55.000 0.00 0.00 0.00 4.79
5955 7304 0.548510 CTCCCAGAATTGACCCCCTC 59.451 60.000 0.00 0.00 0.00 4.30
5956 7305 0.919289 TCCCAGAATTGACCCCCTCC 60.919 60.000 0.00 0.00 0.00 4.30
5957 7306 1.615262 CCAGAATTGACCCCCTCCC 59.385 63.158 0.00 0.00 0.00 4.30
5958 7307 1.615262 CAGAATTGACCCCCTCCCC 59.385 63.158 0.00 0.00 0.00 4.81
5959 7308 1.165782 AGAATTGACCCCCTCCCCA 59.834 57.895 0.00 0.00 0.00 4.96
5960 7309 0.921256 AGAATTGACCCCCTCCCCAG 60.921 60.000 0.00 0.00 0.00 4.45
5961 7310 2.573893 GAATTGACCCCCTCCCCAGC 62.574 65.000 0.00 0.00 0.00 4.85
5962 7311 3.603330 ATTGACCCCCTCCCCAGCT 62.603 63.158 0.00 0.00 0.00 4.24
5963 7312 3.829311 TTGACCCCCTCCCCAGCTT 62.829 63.158 0.00 0.00 0.00 3.74
5964 7313 3.412408 GACCCCCTCCCCAGCTTC 61.412 72.222 0.00 0.00 0.00 3.86
5970 7319 3.415087 CTCCCCAGCTTCCCCCAG 61.415 72.222 0.00 0.00 0.00 4.45
5971 7320 3.950861 CTCCCCAGCTTCCCCCAGA 62.951 68.421 0.00 0.00 0.00 3.86
5972 7321 2.941025 CCCCAGCTTCCCCCAGAA 60.941 66.667 0.00 0.00 0.00 3.02
5973 7322 2.319762 CCCCAGCTTCCCCCAGAAT 61.320 63.158 0.00 0.00 32.82 2.40
5974 7323 1.699752 CCCAGCTTCCCCCAGAATT 59.300 57.895 0.00 0.00 32.82 2.17
5975 7324 0.685458 CCCAGCTTCCCCCAGAATTG 60.685 60.000 0.00 0.00 32.82 2.32
5976 7325 1.325476 CCAGCTTCCCCCAGAATTGC 61.325 60.000 0.00 0.00 32.82 3.56
5977 7326 1.000866 AGCTTCCCCCAGAATTGCC 59.999 57.895 0.00 0.00 32.82 4.52
5978 7327 1.305213 GCTTCCCCCAGAATTGCCA 60.305 57.895 0.00 0.00 32.82 4.92
5979 7328 1.607801 GCTTCCCCCAGAATTGCCAC 61.608 60.000 0.00 0.00 32.82 5.01
5980 7329 0.040204 CTTCCCCCAGAATTGCCACT 59.960 55.000 0.00 0.00 32.82 4.00
5981 7330 0.486879 TTCCCCCAGAATTGCCACTT 59.513 50.000 0.00 0.00 0.00 3.16
5982 7331 0.039618 TCCCCCAGAATTGCCACTTC 59.960 55.000 0.00 0.00 0.00 3.01
5983 7332 0.251742 CCCCCAGAATTGCCACTTCA 60.252 55.000 0.00 0.00 0.00 3.02
5984 7333 1.620524 CCCCCAGAATTGCCACTTCAT 60.621 52.381 0.00 0.00 0.00 2.57
5985 7334 1.753073 CCCCAGAATTGCCACTTCATC 59.247 52.381 0.00 0.00 0.00 2.92
5986 7335 2.622452 CCCCAGAATTGCCACTTCATCT 60.622 50.000 0.00 0.00 0.00 2.90
5987 7336 3.094572 CCCAGAATTGCCACTTCATCTT 58.905 45.455 0.00 0.00 0.00 2.40
5988 7337 3.512724 CCCAGAATTGCCACTTCATCTTT 59.487 43.478 0.00 0.00 0.00 2.52
5989 7338 4.020839 CCCAGAATTGCCACTTCATCTTTT 60.021 41.667 0.00 0.00 0.00 2.27
5990 7339 5.511888 CCCAGAATTGCCACTTCATCTTTTT 60.512 40.000 0.00 0.00 0.00 1.94
6015 7364 9.662947 TTTTACAATTCCTAGCTAGTTAAGGTC 57.337 33.333 19.31 0.00 37.13 3.85
6016 7365 8.605325 TTACAATTCCTAGCTAGTTAAGGTCT 57.395 34.615 19.31 0.00 37.13 3.85
6017 7366 9.705103 TTACAATTCCTAGCTAGTTAAGGTCTA 57.295 33.333 19.31 5.95 37.13 2.59
6018 7367 8.605325 ACAATTCCTAGCTAGTTAAGGTCTAA 57.395 34.615 19.31 0.00 37.13 2.10
6019 7368 9.214962 ACAATTCCTAGCTAGTTAAGGTCTAAT 57.785 33.333 19.31 0.19 37.13 1.73
6023 7372 8.406730 TCCTAGCTAGTTAAGGTCTAATTAGC 57.593 38.462 19.31 9.70 40.67 3.09
6025 7374 9.517868 CCTAGCTAGTTAAGGTCTAATTAGCTA 57.482 37.037 19.31 19.29 45.18 3.32
6027 7376 8.411991 AGCTAGTTAAGGTCTAATTAGCTAGG 57.588 38.462 15.72 0.00 45.18 3.02
6028 7377 8.226112 AGCTAGTTAAGGTCTAATTAGCTAGGA 58.774 37.037 15.72 0.00 45.18 2.94
6029 7378 8.858094 GCTAGTTAAGGTCTAATTAGCTAGGAA 58.142 37.037 7.67 0.00 41.05 3.36
6033 7382 9.833917 GTTAAGGTCTAATTAGCTAGGAATTGT 57.166 33.333 7.67 0.00 0.00 2.71
6060 7409 5.603170 AAATATCAAGTGGCAATTCTGGG 57.397 39.130 0.00 0.00 0.00 4.45
6061 7410 2.905415 ATCAAGTGGCAATTCTGGGA 57.095 45.000 0.00 0.00 0.00 4.37
6062 7411 2.205022 TCAAGTGGCAATTCTGGGAG 57.795 50.000 0.00 0.00 0.00 4.30
6063 7412 1.704628 TCAAGTGGCAATTCTGGGAGA 59.295 47.619 0.00 0.00 0.00 3.71
6064 7413 2.108075 TCAAGTGGCAATTCTGGGAGAA 59.892 45.455 0.00 0.00 38.78 2.87
6065 7414 2.490903 CAAGTGGCAATTCTGGGAGAAG 59.509 50.000 0.00 0.00 37.69 2.85
6066 7415 0.813821 GTGGCAATTCTGGGAGAAGC 59.186 55.000 0.00 0.00 37.69 3.86
6067 7416 0.700564 TGGCAATTCTGGGAGAAGCT 59.299 50.000 0.00 0.00 37.69 3.74
6068 7417 1.101331 GGCAATTCTGGGAGAAGCTG 58.899 55.000 0.00 0.00 37.69 4.24
6069 7418 1.101331 GCAATTCTGGGAGAAGCTGG 58.899 55.000 0.00 0.00 37.69 4.85
6070 7419 1.760192 CAATTCTGGGAGAAGCTGGG 58.240 55.000 0.00 0.00 37.69 4.45
6071 7420 0.627986 AATTCTGGGAGAAGCTGGGG 59.372 55.000 0.00 0.00 37.69 4.96
6072 7421 0.253347 ATTCTGGGAGAAGCTGGGGA 60.253 55.000 0.00 0.00 37.69 4.81
6073 7422 0.911525 TTCTGGGAGAAGCTGGGGAG 60.912 60.000 0.00 0.00 29.50 4.30
6074 7423 2.285668 TGGGAGAAGCTGGGGAGG 60.286 66.667 0.00 0.00 0.00 4.30
6075 7424 3.093172 GGGAGAAGCTGGGGAGGG 61.093 72.222 0.00 0.00 0.00 4.30
6076 7425 3.093172 GGAGAAGCTGGGGAGGGG 61.093 72.222 0.00 0.00 0.00 4.79
6077 7426 3.093172 GAGAAGCTGGGGAGGGGG 61.093 72.222 0.00 0.00 0.00 5.40
6078 7427 3.952799 GAGAAGCTGGGGAGGGGGT 62.953 68.421 0.00 0.00 0.00 4.95
6079 7428 3.412408 GAAGCTGGGGAGGGGGTC 61.412 72.222 0.00 0.00 0.00 4.46
6080 7429 4.285790 AAGCTGGGGAGGGGGTCA 62.286 66.667 0.00 0.00 0.00 4.02
6081 7430 3.829311 AAGCTGGGGAGGGGGTCAA 62.829 63.158 0.00 0.00 0.00 3.18
6082 7431 3.023735 GCTGGGGAGGGGGTCAAT 61.024 66.667 0.00 0.00 0.00 2.57
6083 7432 2.626467 GCTGGGGAGGGGGTCAATT 61.626 63.158 0.00 0.00 0.00 2.32
6084 7433 1.615262 CTGGGGAGGGGGTCAATTC 59.385 63.158 0.00 0.00 0.00 2.17
6085 7434 0.921256 CTGGGGAGGGGGTCAATTCT 60.921 60.000 0.00 0.00 0.00 2.40
6086 7435 1.214305 TGGGGAGGGGGTCAATTCTG 61.214 60.000 0.00 0.00 0.00 3.02
6087 7436 1.615262 GGGAGGGGGTCAATTCTGG 59.385 63.158 0.00 0.00 0.00 3.86
6088 7437 1.615262 GGAGGGGGTCAATTCTGGG 59.385 63.158 0.00 0.00 0.00 4.45
6089 7438 0.919289 GGAGGGGGTCAATTCTGGGA 60.919 60.000 0.00 0.00 0.00 4.37
6090 7439 0.548510 GAGGGGGTCAATTCTGGGAG 59.451 60.000 0.00 0.00 0.00 4.30
6091 7440 0.121197 AGGGGGTCAATTCTGGGAGA 59.879 55.000 0.00 0.00 0.00 3.71
6092 7441 0.999712 GGGGGTCAATTCTGGGAGAA 59.000 55.000 0.00 0.00 38.78 2.87
6093 7442 1.570979 GGGGGTCAATTCTGGGAGAAT 59.429 52.381 0.00 0.00 46.22 2.40
6108 7457 5.644977 GGGAGAATTACCCAAAAGAACTG 57.355 43.478 13.41 0.00 46.05 3.16
6109 7458 4.462834 GGGAGAATTACCCAAAAGAACTGG 59.537 45.833 13.41 0.00 46.05 4.00
6110 7459 4.082190 GGAGAATTACCCAAAAGAACTGGC 60.082 45.833 0.00 0.00 32.10 4.85
6111 7460 3.832490 AGAATTACCCAAAAGAACTGGCC 59.168 43.478 0.00 0.00 32.10 5.36
6112 7461 2.003937 TTACCCAAAAGAACTGGCCC 57.996 50.000 0.00 0.00 32.10 5.80
6133 7482 5.163237 GCCCCTAATGTTAGTTCTGACCATA 60.163 44.000 0.00 0.00 0.00 2.74
6205 7554 3.265791 CAAATGCGAGAAGGCTCTACTT 58.734 45.455 0.00 0.00 39.06 2.24
6385 7734 1.134228 ACACCGACCAAACCTAACCT 58.866 50.000 0.00 0.00 0.00 3.50
6388 7737 1.770061 ACCGACCAAACCTAACCTTCA 59.230 47.619 0.00 0.00 0.00 3.02
6422 7771 0.975556 TGAGTAATGGCAGCGAGGGA 60.976 55.000 0.00 0.00 0.00 4.20
6423 7772 0.249657 GAGTAATGGCAGCGAGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
6508 7857 2.197577 GGAAGAAGATGACACTAGCGC 58.802 52.381 0.00 0.00 0.00 5.92
6624 7973 3.030291 GTGAGACCAGATGATCCTGAGT 58.970 50.000 0.93 0.00 36.29 3.41
6712 8064 0.401356 TTGGTGAGCAGCTGATGGAA 59.599 50.000 20.43 0.00 0.00 3.53
6713 8065 0.622136 TGGTGAGCAGCTGATGGAAT 59.378 50.000 20.43 0.00 0.00 3.01
6743 8096 8.037758 TGCCCCTTTAAATGTACATATTTTGTG 58.962 33.333 9.21 0.00 39.48 3.33
6744 8097 8.038351 GCCCCTTTAAATGTACATATTTTGTGT 58.962 33.333 9.21 0.00 39.48 3.72
6761 8114 7.691430 TTTTGTGTGTGCTGTGTAAAATATG 57.309 32.000 0.00 0.00 0.00 1.78
6763 8116 4.276926 TGTGTGTGCTGTGTAAAATATGCA 59.723 37.500 0.00 0.00 0.00 3.96
7163 8517 4.404640 TGTTAGTCCGGTATCATAGAGGG 58.595 47.826 0.00 0.00 0.00 4.30
7168 8522 2.091499 TCCGGTATCATAGAGGGTGTGT 60.091 50.000 0.00 0.00 0.00 3.72
7175 8529 3.642141 TCATAGAGGGTGTGTGCTGATA 58.358 45.455 0.00 0.00 0.00 2.15
7209 8563 5.739959 TGTAATGTGTGTGGTATGCTGTAT 58.260 37.500 0.00 0.00 0.00 2.29
7210 8564 6.879400 TGTAATGTGTGTGGTATGCTGTATA 58.121 36.000 0.00 0.00 0.00 1.47
7245 8599 9.176181 TCGTTTGTATTTTATTCACTTTTCTGC 57.824 29.630 0.00 0.00 0.00 4.26
7251 8605 9.677567 GTATTTTATTCACTTTTCTGCAACTCA 57.322 29.630 0.00 0.00 0.00 3.41
7282 8636 4.142071 GGTGTCTAAGATGCACATCTCTGA 60.142 45.833 13.31 11.29 46.75 3.27
7298 8652 6.016024 ACATCTCTGACTTATTTTTGCAGCAA 60.016 34.615 2.83 2.83 0.00 3.91
7299 8653 6.579666 TCTCTGACTTATTTTTGCAGCAAT 57.420 33.333 9.12 0.00 0.00 3.56
7317 8671 1.191535 ATGGCATTTGAGCAGCACAT 58.808 45.000 0.00 0.00 35.83 3.21
7320 8674 0.528924 GCATTTGAGCAGCACATCCA 59.471 50.000 0.00 0.00 0.00 3.41
7355 8709 1.342174 CAGCAAAACTGCCAGGTCAAT 59.658 47.619 0.00 0.00 40.19 2.57
7374 8728 6.153067 GTCAATATACCTTCTGTCCGATCAG 58.847 44.000 0.00 0.00 36.85 2.90
7427 8782 4.382147 GGTTCTAGAATTCTTGTCGCCTCT 60.382 45.833 14.36 0.00 0.00 3.69
7430 8785 3.244033 AGAATTCTTGTCGCCTCTGAG 57.756 47.619 0.88 0.00 0.00 3.35
7450 8805 2.025887 AGGGAGGTTCTACAAATGCCAG 60.026 50.000 0.00 0.00 0.00 4.85
7460 8815 5.689835 TCTACAAATGCCAGGCACATATAA 58.310 37.500 19.10 0.00 43.04 0.98
7467 8828 8.767085 CAAATGCCAGGCACATATAAAAATAAG 58.233 33.333 19.10 0.00 43.04 1.73
7497 8859 2.737544 TGCAGCCATGAAATATGGTGT 58.262 42.857 7.67 0.00 41.17 4.16
7514 8876 3.153919 GGTGTGTTCTTTTGATAGCCCA 58.846 45.455 0.00 0.00 0.00 5.36
7556 8918 1.378250 GCTCTGCTCCAGCCAACAT 60.378 57.895 0.00 0.00 41.18 2.71
7560 8922 1.202915 TCTGCTCCAGCCAACATCAAA 60.203 47.619 0.00 0.00 41.18 2.69
7569 8931 4.398988 CCAGCCAACATCAAAATGCTACTA 59.601 41.667 0.00 0.00 36.26 1.82
7576 8938 4.141482 ACATCAAAATGCTACTACCCCGAT 60.141 41.667 0.00 0.00 36.26 4.18
7578 8940 2.800544 CAAAATGCTACTACCCCGATCG 59.199 50.000 8.51 8.51 0.00 3.69
7579 8941 1.991121 AATGCTACTACCCCGATCGA 58.009 50.000 18.66 0.00 0.00 3.59
7580 8942 1.245732 ATGCTACTACCCCGATCGAC 58.754 55.000 18.66 0.00 0.00 4.20
7581 8943 0.182061 TGCTACTACCCCGATCGACT 59.818 55.000 18.66 0.17 0.00 4.18
7587 8949 2.301009 ACTACCCCGATCGACTTTGTTT 59.699 45.455 18.66 0.00 0.00 2.83
7605 8967 1.789523 TTGGAGCCTTATCCTAGCGT 58.210 50.000 0.00 0.00 40.29 5.07
7623 8985 4.322101 GCGTTGAATTCTTCGCTTAAGA 57.678 40.909 27.12 0.00 44.28 2.10
7624 8986 4.082447 GCGTTGAATTCTTCGCTTAAGAC 58.918 43.478 27.12 0.00 44.02 3.01
7625 8987 4.377022 GCGTTGAATTCTTCGCTTAAGACA 60.377 41.667 27.12 0.00 44.02 3.41
7626 8988 5.308927 CGTTGAATTCTTCGCTTAAGACAG 58.691 41.667 6.67 0.00 44.02 3.51
7627 8989 5.118664 CGTTGAATTCTTCGCTTAAGACAGA 59.881 40.000 6.67 0.61 44.02 3.41
7628 8990 6.529696 GTTGAATTCTTCGCTTAAGACAGAG 58.470 40.000 6.67 0.00 44.02 3.35
7629 8991 6.025749 TGAATTCTTCGCTTAAGACAGAGA 57.974 37.500 6.67 0.67 44.02 3.10
7630 8992 5.864474 TGAATTCTTCGCTTAAGACAGAGAC 59.136 40.000 6.67 0.99 44.02 3.36
7631 8993 4.848562 TTCTTCGCTTAAGACAGAGACA 57.151 40.909 6.67 0.00 44.02 3.41
7632 8994 4.427096 TCTTCGCTTAAGACAGAGACAG 57.573 45.455 6.67 0.00 39.36 3.51
7633 8995 3.821600 TCTTCGCTTAAGACAGAGACAGT 59.178 43.478 6.67 0.00 39.36 3.55
7634 8996 3.833545 TCGCTTAAGACAGAGACAGTC 57.166 47.619 6.67 0.00 36.26 3.51
7635 8997 2.488545 TCGCTTAAGACAGAGACAGTCC 59.511 50.000 6.67 0.00 36.68 3.85
7636 8998 2.229062 CGCTTAAGACAGAGACAGTCCA 59.771 50.000 6.67 0.00 36.68 4.02
7637 8999 3.305403 CGCTTAAGACAGAGACAGTCCAA 60.305 47.826 6.67 0.00 36.68 3.53
7638 9000 4.632153 GCTTAAGACAGAGACAGTCCAAA 58.368 43.478 6.67 0.00 36.68 3.28
7639 9001 4.449405 GCTTAAGACAGAGACAGTCCAAAC 59.551 45.833 6.67 0.00 36.68 2.93
7640 9002 3.477210 AAGACAGAGACAGTCCAAACC 57.523 47.619 0.00 0.00 36.68 3.27
7641 9003 1.694696 AGACAGAGACAGTCCAAACCC 59.305 52.381 0.00 0.00 36.68 4.11
7642 9004 1.416401 GACAGAGACAGTCCAAACCCA 59.584 52.381 0.00 0.00 0.00 4.51
7643 9005 2.039084 GACAGAGACAGTCCAAACCCAT 59.961 50.000 0.00 0.00 0.00 4.00
7644 9006 2.443255 ACAGAGACAGTCCAAACCCATT 59.557 45.455 0.00 0.00 0.00 3.16
7645 9007 3.077359 CAGAGACAGTCCAAACCCATTC 58.923 50.000 0.00 0.00 0.00 2.67
7646 9008 2.711009 AGAGACAGTCCAAACCCATTCA 59.289 45.455 0.00 0.00 0.00 2.57
7647 9009 3.331889 AGAGACAGTCCAAACCCATTCAT 59.668 43.478 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 79 9.320406 GATGATTCGTTTTGTTCGTTATTTACA 57.680 29.630 0.00 0.00 0.00 2.41
97 101 8.353684 CCTAAAAGAGTTCTATCTAAGCGATGA 58.646 37.037 0.00 0.00 33.48 2.92
113 117 8.925338 CAACCTCTATGTATACCCTAAAAGAGT 58.075 37.037 0.00 0.00 0.00 3.24
184 191 6.378582 CAAGCGGTTGTATAGAACACAAAAT 58.621 36.000 18.96 0.00 38.00 1.82
203 210 3.251004 GTCTATTTTATCTGGGGCAAGCG 59.749 47.826 0.00 0.00 0.00 4.68
204 211 4.036852 GTGTCTATTTTATCTGGGGCAAGC 59.963 45.833 0.00 0.00 0.00 4.01
207 215 4.853468 TGTGTCTATTTTATCTGGGGCA 57.147 40.909 0.00 0.00 0.00 5.36
216 224 7.630082 AGCCATAGGAAGTTGTGTCTATTTTA 58.370 34.615 0.00 0.00 0.00 1.52
222 230 5.499004 TTAAGCCATAGGAAGTTGTGTCT 57.501 39.130 0.00 0.00 0.00 3.41
391 399 3.589951 AGCTGCATTGATGAACCCTAT 57.410 42.857 1.02 0.00 0.00 2.57
481 493 9.803315 GGACTTTTAAGAAGTCATTTCAAAAGT 57.197 29.630 21.48 9.53 46.31 2.66
598 617 0.528017 TGTTTGTGCGTTGCAAAGGA 59.472 45.000 14.31 8.61 41.47 3.36
601 620 3.428746 AGTATGTTTGTGCGTTGCAAA 57.571 38.095 0.00 0.00 41.47 3.68
635 656 4.039488 ACCAACCGTGTCTGTAGTTTATCA 59.961 41.667 0.00 0.00 0.00 2.15
646 667 0.895530 ATCATCGACCAACCGTGTCT 59.104 50.000 0.00 0.00 0.00 3.41
657 678 5.335127 CCCTGAATGAACAAAATCATCGAC 58.665 41.667 0.00 0.00 39.08 4.20
670 691 3.675348 AATCATCTGGCCCTGAATGAA 57.325 42.857 0.00 0.00 0.00 2.57
671 692 3.675348 AAATCATCTGGCCCTGAATGA 57.325 42.857 0.00 4.54 0.00 2.57
672 693 3.251729 CGTAAATCATCTGGCCCTGAATG 59.748 47.826 0.00 0.00 0.00 2.67
673 694 3.117888 ACGTAAATCATCTGGCCCTGAAT 60.118 43.478 0.00 0.00 0.00 2.57
676 697 2.332063 ACGTAAATCATCTGGCCCTG 57.668 50.000 0.00 0.00 0.00 4.45
677 698 3.646162 TCATACGTAAATCATCTGGCCCT 59.354 43.478 0.00 0.00 0.00 5.19
678 699 4.002906 TCATACGTAAATCATCTGGCCC 57.997 45.455 0.00 0.00 0.00 5.80
679 700 6.017109 ACAAATCATACGTAAATCATCTGGCC 60.017 38.462 0.00 0.00 0.00 5.36
680 701 6.852853 CACAAATCATACGTAAATCATCTGGC 59.147 38.462 0.00 0.00 0.00 4.85
681 702 8.141835 TCACAAATCATACGTAAATCATCTGG 57.858 34.615 0.00 0.00 0.00 3.86
682 703 9.986833 TTTCACAAATCATACGTAAATCATCTG 57.013 29.630 0.00 0.00 0.00 2.90
685 706 9.272901 CGTTTTCACAAATCATACGTAAATCAT 57.727 29.630 0.00 0.00 0.00 2.45
686 707 8.496751 TCGTTTTCACAAATCATACGTAAATCA 58.503 29.630 0.00 0.00 0.00 2.57
687 708 8.868744 TCGTTTTCACAAATCATACGTAAATC 57.131 30.769 0.00 0.00 0.00 2.17
688 709 8.500773 ACTCGTTTTCACAAATCATACGTAAAT 58.499 29.630 0.00 0.00 0.00 1.40
689 710 7.794810 CACTCGTTTTCACAAATCATACGTAAA 59.205 33.333 0.00 0.00 0.00 2.01
690 711 7.042590 ACACTCGTTTTCACAAATCATACGTAA 60.043 33.333 0.00 0.00 0.00 3.18
691 712 6.421501 ACACTCGTTTTCACAAATCATACGTA 59.578 34.615 0.00 0.00 0.00 3.57
692 713 5.235616 ACACTCGTTTTCACAAATCATACGT 59.764 36.000 0.00 0.00 0.00 3.57
693 714 5.675970 ACACTCGTTTTCACAAATCATACG 58.324 37.500 0.00 0.00 0.00 3.06
694 715 9.051027 CATTACACTCGTTTTCACAAATCATAC 57.949 33.333 0.00 0.00 0.00 2.39
695 716 8.994170 TCATTACACTCGTTTTCACAAATCATA 58.006 29.630 0.00 0.00 0.00 2.15
696 717 7.803189 GTCATTACACTCGTTTTCACAAATCAT 59.197 33.333 0.00 0.00 0.00 2.45
697 718 7.129622 GTCATTACACTCGTTTTCACAAATCA 58.870 34.615 0.00 0.00 0.00 2.57
698 719 7.129622 TGTCATTACACTCGTTTTCACAAATC 58.870 34.615 0.00 0.00 0.00 2.17
699 720 7.022055 TGTCATTACACTCGTTTTCACAAAT 57.978 32.000 0.00 0.00 0.00 2.32
700 721 6.424176 TGTCATTACACTCGTTTTCACAAA 57.576 33.333 0.00 0.00 0.00 2.83
701 722 6.612247 ATGTCATTACACTCGTTTTCACAA 57.388 33.333 0.00 0.00 38.78 3.33
702 723 6.612247 AATGTCATTACACTCGTTTTCACA 57.388 33.333 0.00 0.00 38.78 3.58
703 724 7.793902 AGTAATGTCATTACACTCGTTTTCAC 58.206 34.615 28.94 7.96 45.80 3.18
704 725 7.956420 AGTAATGTCATTACACTCGTTTTCA 57.044 32.000 28.94 0.00 45.80 2.69
707 728 9.485206 AGTTAAGTAATGTCATTACACTCGTTT 57.515 29.630 28.94 18.75 45.80 3.60
728 749 9.467258 CGGGTGAAACGAGAATATATTAGTTAA 57.533 33.333 11.45 4.32 38.12 2.01
729 750 7.596248 GCGGGTGAAACGAGAATATATTAGTTA 59.404 37.037 11.45 0.00 38.12 2.24
730 751 6.423001 GCGGGTGAAACGAGAATATATTAGTT 59.577 38.462 0.00 3.21 38.12 2.24
731 752 5.924825 GCGGGTGAAACGAGAATATATTAGT 59.075 40.000 0.00 0.00 38.12 2.24
732 753 5.924254 TGCGGGTGAAACGAGAATATATTAG 59.076 40.000 0.00 0.00 38.12 1.73
733 754 5.845103 TGCGGGTGAAACGAGAATATATTA 58.155 37.500 0.00 0.00 38.12 0.98
734 755 4.699637 TGCGGGTGAAACGAGAATATATT 58.300 39.130 0.00 0.00 38.12 1.28
735 756 4.330944 TGCGGGTGAAACGAGAATATAT 57.669 40.909 0.00 0.00 38.12 0.86
736 757 3.804786 TGCGGGTGAAACGAGAATATA 57.195 42.857 0.00 0.00 38.12 0.86
737 758 2.684001 TGCGGGTGAAACGAGAATAT 57.316 45.000 0.00 0.00 38.12 1.28
738 759 2.459060 TTGCGGGTGAAACGAGAATA 57.541 45.000 0.00 0.00 38.12 1.75
739 760 1.600023 TTTGCGGGTGAAACGAGAAT 58.400 45.000 0.00 0.00 38.12 2.40
740 761 1.380524 TTTTGCGGGTGAAACGAGAA 58.619 45.000 0.00 0.00 38.12 2.87
741 762 1.380524 TTTTTGCGGGTGAAACGAGA 58.619 45.000 0.00 0.00 38.12 4.04
742 763 3.928343 TTTTTGCGGGTGAAACGAG 57.072 47.368 0.00 0.00 38.12 4.18
800 821 4.261614 GCGGTTTTGGTCTTCTTTTCTGAT 60.262 41.667 0.00 0.00 0.00 2.90
801 822 3.066203 GCGGTTTTGGTCTTCTTTTCTGA 59.934 43.478 0.00 0.00 0.00 3.27
814 835 1.586154 AAGCTGGATCGCGGTTTTGG 61.586 55.000 6.13 0.00 34.40 3.28
900 921 2.520536 GGCGACATGGGAGCCCTAT 61.521 63.158 14.89 0.00 44.80 2.57
1385 1422 5.703978 TTGGGTGAATACTGAACACAATG 57.296 39.130 0.00 0.00 32.44 2.82
1418 1456 7.899973 AGTGCAATTGATTTGGTTCTCTAAAT 58.100 30.769 10.34 0.00 37.43 1.40
1421 1459 6.680810 CAAGTGCAATTGATTTGGTTCTCTA 58.319 36.000 21.79 0.00 35.75 2.43
1424 1462 4.060205 GCAAGTGCAATTGATTTGGTTCT 58.940 39.130 29.48 0.00 41.59 3.01
1447 1485 7.147312 CACCAAACAGAACACAATAATCATGT 58.853 34.615 0.00 0.00 0.00 3.21
1448 1486 6.587226 CCACCAAACAGAACACAATAATCATG 59.413 38.462 0.00 0.00 0.00 3.07
1533 1571 8.085296 CCAGTTAAAGCAATAACCACATAAACA 58.915 33.333 7.74 0.00 36.62 2.83
1556 1594 5.646215 ACCTAGTCCACTTATATCTCCCAG 58.354 45.833 0.00 0.00 0.00 4.45
1572 1610 5.001232 TGGCACACTAAATTGAACCTAGTC 58.999 41.667 0.00 0.00 0.00 2.59
1616 1654 3.206964 GAGCTCAGCCAAATAGGTTACC 58.793 50.000 9.40 0.00 40.61 2.85
1621 1659 0.842635 AGGGAGCTCAGCCAAATAGG 59.157 55.000 17.19 0.00 41.84 2.57
1660 1698 4.261322 CGCTGGAGCATGCAAATATAAGTT 60.261 41.667 21.98 0.00 42.21 2.66
1729 1767 4.260172 CGGCACAGAAAAACAAAAATCCAC 60.260 41.667 0.00 0.00 0.00 4.02
1766 1804 2.552367 AGGGGAAAAGGTCTAGACTGG 58.448 52.381 21.88 0.00 0.00 4.00
1893 1931 2.898738 AGAGGCCATCTGTCGCAG 59.101 61.111 5.01 1.02 36.69 5.18
2011 2050 1.140312 ATGGCCTATGTGGGTACTGG 58.860 55.000 3.32 0.00 36.00 4.00
2013 2052 2.849943 TGAAATGGCCTATGTGGGTACT 59.150 45.455 3.32 0.00 36.00 2.73
2060 2099 9.812347 TTTCCAGGATATGCATTATAAGATTGT 57.188 29.630 3.54 0.00 0.00 2.71
2063 2102 9.417561 CCATTTCCAGGATATGCATTATAAGAT 57.582 33.333 13.20 0.00 0.00 2.40
2064 2103 8.393259 ACCATTTCCAGGATATGCATTATAAGA 58.607 33.333 13.20 0.00 0.00 2.10
2065 2104 8.464404 CACCATTTCCAGGATATGCATTATAAG 58.536 37.037 13.20 1.87 0.00 1.73
2066 2105 7.949565 ACACCATTTCCAGGATATGCATTATAA 59.050 33.333 13.20 0.00 0.00 0.98
2185 2556 2.087646 GTTCTCTGTTGATTGAGGCCC 58.912 52.381 0.00 0.00 0.00 5.80
2305 2676 8.950208 ATTAAGACAGTAGGCTTTCTTCATAC 57.050 34.615 0.00 0.00 39.98 2.39
2522 2893 4.530710 TGTAACGATACCAGCTCAGTTT 57.469 40.909 0.00 0.00 0.00 2.66
2611 2983 6.097554 TGCCTAGAAACCACATCTTTTCAAAA 59.902 34.615 0.00 0.00 34.68 2.44
2666 3038 5.645056 TGCTTAATTCTGGATATGTGGGA 57.355 39.130 0.00 0.00 0.00 4.37
2688 3060 9.922477 ATGAGAAGATATGATCCATATTTGCAT 57.078 29.630 0.00 0.00 37.20 3.96
2740 3112 5.897377 AGCTCTAACTTGTGTTGTGTTTT 57.103 34.783 0.00 0.00 37.59 2.43
2741 3113 5.640732 CAAGCTCTAACTTGTGTTGTGTTT 58.359 37.500 0.00 0.00 41.74 2.83
2742 3114 5.235305 CAAGCTCTAACTTGTGTTGTGTT 57.765 39.130 0.00 0.00 41.74 3.32
2864 3237 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2865 3238 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2866 3239 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2867 3240 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2868 3241 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2869 3242 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2870 3243 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2871 3244 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
2872 3245 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
2873 3246 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
2874 3247 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
2875 3248 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
2882 3255 9.826574 TTGTATTAGTACAAAGTTGAGACACTT 57.173 29.630 8.25 0.00 45.29 3.16
2899 3272 9.991906 TCAAGCTTAGTACAACTTTGTATTAGT 57.008 29.630 0.00 0.00 44.59 2.24
2902 3275 8.989980 GTCTCAAGCTTAGTACAACTTTGTATT 58.010 33.333 0.00 4.04 44.59 1.89
2903 3276 8.148351 TGTCTCAAGCTTAGTACAACTTTGTAT 58.852 33.333 0.00 0.00 44.59 2.29
2904 3277 7.494211 TGTCTCAAGCTTAGTACAACTTTGTA 58.506 34.615 0.00 0.00 42.35 2.41
2905 3278 6.346096 TGTCTCAAGCTTAGTACAACTTTGT 58.654 36.000 0.00 0.00 44.86 2.83
2906 3279 6.480320 ACTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
2907 3280 6.583562 ACTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
2908 3281 6.163135 ACTGTCTCAAGCTTAGTACAACTT 57.837 37.500 0.00 0.00 0.00 2.66
2909 3282 5.793030 ACTGTCTCAAGCTTAGTACAACT 57.207 39.130 0.00 0.00 0.00 3.16
2910 3283 8.535690 AATAACTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
2911 3284 9.555727 AAAATAACTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
2912 3285 8.988934 CAAAATAACTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 2.68 0.00 2.90
2913 3286 8.443937 CCAAAATAACTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
2914 3287 7.606456 CCCAAAATAACTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
2915 3288 6.431234 CCCAAAATAACTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
2916 3289 6.655003 TCCCAAAATAACTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
2917 3290 6.430000 GTCCCAAAATAACTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
2918 3291 5.241728 GTCCCAAAATAACTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
2919 3292 4.762251 GTCCCAAAATAACTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
2920 3293 4.378459 CGTCCCAAAATAACTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
2921 3294 4.154195 CCGTCCCAAAATAACTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
2922 3295 4.069304 CCGTCCCAAAATAACTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2923 3296 3.325425 TCCGTCCCAAAATAACTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2924 3297 3.933332 CTCCGTCCCAAAATAACTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2925 3298 3.326880 ACTCCGTCCCAAAATAACTGTCT 59.673 43.478 0.00 0.00 0.00 3.41
2926 3299 3.435671 CACTCCGTCCCAAAATAACTGTC 59.564 47.826 0.00 0.00 0.00 3.51
2927 3300 3.071892 TCACTCCGTCCCAAAATAACTGT 59.928 43.478 0.00 0.00 0.00 3.55
2928 3301 3.670625 TCACTCCGTCCCAAAATAACTG 58.329 45.455 0.00 0.00 0.00 3.16
2929 3302 3.326880 ACTCACTCCGTCCCAAAATAACT 59.673 43.478 0.00 0.00 0.00 2.24
2930 3303 3.671716 ACTCACTCCGTCCCAAAATAAC 58.328 45.455 0.00 0.00 0.00 1.89
2931 3304 4.529377 ACTACTCACTCCGTCCCAAAATAA 59.471 41.667 0.00 0.00 0.00 1.40
2932 3305 4.081862 CACTACTCACTCCGTCCCAAAATA 60.082 45.833 0.00 0.00 0.00 1.40
2933 3306 2.904434 ACTACTCACTCCGTCCCAAAAT 59.096 45.455 0.00 0.00 0.00 1.82
2934 3307 2.036733 CACTACTCACTCCGTCCCAAAA 59.963 50.000 0.00 0.00 0.00 2.44
2935 3308 1.616865 CACTACTCACTCCGTCCCAAA 59.383 52.381 0.00 0.00 0.00 3.28
2936 3309 1.254026 CACTACTCACTCCGTCCCAA 58.746 55.000 0.00 0.00 0.00 4.12
2937 3310 0.111832 ACACTACTCACTCCGTCCCA 59.888 55.000 0.00 0.00 0.00 4.37
2938 3311 0.526662 CACACTACTCACTCCGTCCC 59.473 60.000 0.00 0.00 0.00 4.46
2939 3312 1.245732 ACACACTACTCACTCCGTCC 58.754 55.000 0.00 0.00 0.00 4.79
2940 3313 3.119919 CCTTACACACTACTCACTCCGTC 60.120 52.174 0.00 0.00 0.00 4.79
2941 3314 2.818432 CCTTACACACTACTCACTCCGT 59.182 50.000 0.00 0.00 0.00 4.69
2942 3315 3.079578 TCCTTACACACTACTCACTCCG 58.920 50.000 0.00 0.00 0.00 4.63
2943 3316 4.463186 ACATCCTTACACACTACTCACTCC 59.537 45.833 0.00 0.00 0.00 3.85
2944 3317 5.403246 CACATCCTTACACACTACTCACTC 58.597 45.833 0.00 0.00 0.00 3.51
2945 3318 4.220821 CCACATCCTTACACACTACTCACT 59.779 45.833 0.00 0.00 0.00 3.41
2946 3319 4.495422 CCACATCCTTACACACTACTCAC 58.505 47.826 0.00 0.00 0.00 3.51
2947 3320 3.056107 GCCACATCCTTACACACTACTCA 60.056 47.826 0.00 0.00 0.00 3.41
2948 3321 3.056107 TGCCACATCCTTACACACTACTC 60.056 47.826 0.00 0.00 0.00 2.59
2949 3322 2.903784 TGCCACATCCTTACACACTACT 59.096 45.455 0.00 0.00 0.00 2.57
2950 3323 3.328382 TGCCACATCCTTACACACTAC 57.672 47.619 0.00 0.00 0.00 2.73
2951 3324 4.323417 CTTTGCCACATCCTTACACACTA 58.677 43.478 0.00 0.00 0.00 2.74
2952 3325 2.949177 TTGCCACATCCTTACACACT 57.051 45.000 0.00 0.00 0.00 3.55
3007 3381 3.257127 ACACTCCTCAGCTTACTCACTTC 59.743 47.826 0.00 0.00 0.00 3.01
3021 3395 4.688413 GTGAAACATGAAGAGACACTCCTC 59.312 45.833 0.00 0.00 36.32 3.71
3123 3499 5.578336 TCAATTATCTGAGAAGAAGCACACG 59.422 40.000 0.00 0.00 0.00 4.49
3532 3908 6.143919 CGAGTATGCGATAAATAAGTTGAGCA 59.856 38.462 0.00 0.00 37.77 4.26
3533 3909 6.144080 ACGAGTATGCGATAAATAAGTTGAGC 59.856 38.462 0.00 0.00 34.83 4.26
3534 3910 7.494130 CACGAGTATGCGATAAATAAGTTGAG 58.506 38.462 0.00 0.00 34.83 3.02
3535 3911 6.074516 GCACGAGTATGCGATAAATAAGTTGA 60.075 38.462 0.00 0.00 35.50 3.18
3536 3912 6.065153 GCACGAGTATGCGATAAATAAGTTG 58.935 40.000 0.00 0.00 35.50 3.16
3537 3913 6.211664 GCACGAGTATGCGATAAATAAGTT 57.788 37.500 0.00 0.00 35.50 2.66
3549 3925 2.231215 AATGAGGAGCACGAGTATGC 57.769 50.000 0.00 0.00 46.50 3.14
3550 3926 2.868583 CCAAATGAGGAGCACGAGTATG 59.131 50.000 0.00 0.00 0.00 2.39
3552 3928 2.176045 TCCAAATGAGGAGCACGAGTA 58.824 47.619 0.00 0.00 32.77 2.59
3553 3929 0.976641 TCCAAATGAGGAGCACGAGT 59.023 50.000 0.00 0.00 32.77 4.18
3554 3930 1.938577 CATCCAAATGAGGAGCACGAG 59.061 52.381 0.00 0.00 41.90 4.18
3555 3931 1.407299 CCATCCAAATGAGGAGCACGA 60.407 52.381 0.00 0.00 41.90 4.35
3557 3933 2.134789 ACCATCCAAATGAGGAGCAC 57.865 50.000 0.00 0.00 41.90 4.40
3559 3935 4.090761 TCATACCATCCAAATGAGGAGC 57.909 45.455 0.00 0.00 41.90 4.70
3560 3936 5.530171 CAGTTCATACCATCCAAATGAGGAG 59.470 44.000 0.00 0.00 41.90 3.69
3658 4077 9.277783 ACATACTCCTCTTTTATGTGCATATTC 57.722 33.333 0.00 0.00 35.56 1.75
3660 4079 9.712305 GTACATACTCCTCTTTTATGTGCATAT 57.288 33.333 0.31 0.31 38.19 1.78
3665 4084 7.011482 GCCTTGTACATACTCCTCTTTTATGTG 59.989 40.741 0.00 0.00 37.11 3.21
3736 4155 9.326413 GTCTAAATTCAGGTTTAAGCATAGCTA 57.674 33.333 0.00 0.00 38.25 3.32
3743 4162 7.381408 GGTTGTTGTCTAAATTCAGGTTTAAGC 59.619 37.037 0.00 0.00 0.00 3.09
3785 4204 6.927381 CCAGCAGAAGAAGTCATTTTGAAAAT 59.073 34.615 0.00 0.00 0.00 1.82
4169 4588 6.872020 AGCTGAATCATGAAAATTTGAAGTGG 59.128 34.615 0.00 0.00 0.00 4.00
4181 4600 7.223260 AGAAAAATGTGAGCTGAATCATGAA 57.777 32.000 0.00 0.00 0.00 2.57
4213 4632 9.685828 GTATATCGATAAGCTTTCTCTCACTTT 57.314 33.333 9.61 0.00 0.00 2.66
4231 4650 5.766670 ACCAAATCAGTAGGTCGTATATCGA 59.233 40.000 0.00 0.00 46.83 3.59
4232 4651 6.010294 ACCAAATCAGTAGGTCGTATATCG 57.990 41.667 0.00 0.00 41.41 2.92
4324 5638 7.817962 CCCTCCGTTCCAAAATATAGTGTATAG 59.182 40.741 0.00 0.00 0.00 1.31
4344 5659 5.322754 TGAGATAACCTAATACTCCCTCCG 58.677 45.833 0.00 0.00 0.00 4.63
4382 5697 7.493645 TGTCTTGACTCATATCAAACTATGCTG 59.506 37.037 2.35 0.00 38.12 4.41
4405 5720 3.614616 CGATCCTTGTGCTCTAAACTGTC 59.385 47.826 0.00 0.00 0.00 3.51
4430 5745 2.041430 TCATCCCCAGCCCGGTTA 59.959 61.111 0.00 0.00 0.00 2.85
4431 5746 3.411517 CTCATCCCCAGCCCGGTT 61.412 66.667 0.00 0.00 0.00 4.44
4680 5996 0.179040 GACGGACCAACAACCAAGGA 60.179 55.000 0.00 0.00 0.00 3.36
4681 5997 0.464735 TGACGGACCAACAACCAAGG 60.465 55.000 0.00 0.00 0.00 3.61
4755 6100 1.330521 CGATCAAAACGCATCCGGAAT 59.669 47.619 9.01 0.00 39.22 3.01
4785 6130 3.263941 GGCGTTTGGCTGTCGAAT 58.736 55.556 0.00 0.00 42.94 3.34
4856 6202 1.480954 GGGTAGATTCTCGCCTGAACA 59.519 52.381 0.00 0.00 0.00 3.18
4864 6210 1.683917 CTGACCTGGGGTAGATTCTCG 59.316 57.143 0.00 0.00 35.25 4.04
4908 6254 2.653115 CGAGCACTGACAGGCTGA 59.347 61.111 23.66 0.00 41.22 4.26
4942 6288 2.750166 CGAACAGTAGAGAGGAGAAGCA 59.250 50.000 0.00 0.00 0.00 3.91
4946 6292 2.360844 CAGCGAACAGTAGAGAGGAGA 58.639 52.381 0.00 0.00 0.00 3.71
4947 6293 1.403679 CCAGCGAACAGTAGAGAGGAG 59.596 57.143 0.00 0.00 0.00 3.69
4956 6302 1.415672 TTCCCCTTCCAGCGAACAGT 61.416 55.000 0.00 0.00 0.00 3.55
4966 6312 7.665145 TCATTTTCAATTGATTTTTCCCCTTCC 59.335 33.333 9.40 0.00 0.00 3.46
4972 6318 7.804600 GCCTGTTCATTTTCAATTGATTTTTCC 59.195 33.333 9.40 0.00 0.00 3.13
4980 6326 4.151689 CAGCAGCCTGTTCATTTTCAATTG 59.848 41.667 0.00 0.00 34.31 2.32
4995 6341 1.152483 TTTTTGGGAGCAGCAGCCT 60.152 52.632 0.00 0.00 43.56 4.58
5018 6364 2.925170 AAGTGAGGAGCGGCTGGT 60.925 61.111 7.50 0.00 0.00 4.00
5024 6371 2.169832 TTTTCCTGAAGTGAGGAGCG 57.830 50.000 0.00 0.00 43.26 5.03
5048 6395 0.821711 TTGTCAGAAAACCAGGCGGG 60.822 55.000 0.79 0.79 44.81 6.13
5083 6430 7.687941 ACAGAGGACCATACTTAATTGTTTG 57.312 36.000 0.00 0.00 0.00 2.93
5123 6471 5.796350 AGTGTGCAATTAATCCTACGAAC 57.204 39.130 0.00 0.00 0.00 3.95
5199 6548 3.140325 TGTTTTGAGAAGTAGGGCCAG 57.860 47.619 6.18 0.00 0.00 4.85
5226 6575 9.724839 GTAAACATTTTTGTAGCTTTGACAGTA 57.275 29.630 0.00 0.00 0.00 2.74
5230 6579 6.422701 GGGGTAAACATTTTTGTAGCTTTGAC 59.577 38.462 0.00 0.00 0.00 3.18
5280 6629 8.973182 TGACAACATTAAAACTAAATATCCCCC 58.027 33.333 0.00 0.00 0.00 5.40
5378 6727 4.219115 TCACACCAAGTTCTCTCTTCTCT 58.781 43.478 0.00 0.00 0.00 3.10
5560 6909 1.208293 CCCACCTCTTCAGGAGTTAGC 59.792 57.143 0.00 0.00 43.65 3.09
5611 6960 7.650504 CCAGAGGCAACATAAATATGAACATTG 59.349 37.037 7.40 3.06 37.15 2.82
5714 7063 0.458025 GCCAGCTCATCTTTGCTTGC 60.458 55.000 0.00 0.00 39.95 4.01
5725 7074 1.471829 TTGAGAACGGAGCCAGCTCA 61.472 55.000 20.56 0.00 44.40 4.26
5794 7143 2.772568 TGTTGGTCACAAAAGCATCG 57.227 45.000 0.00 0.00 38.54 3.84
5809 7158 5.336150 TGGCCATATTACCATTGTTGTTG 57.664 39.130 0.00 0.00 0.00 3.33
5914 7263 1.406860 TTGCCCAAAAGAACTGGCCC 61.407 55.000 0.00 0.00 43.35 5.80
5915 7264 0.686789 ATTGCCCAAAAGAACTGGCC 59.313 50.000 0.00 0.00 43.35 5.36
5916 7265 2.037641 AGAATTGCCCAAAAGAACTGGC 59.962 45.455 0.00 0.00 44.27 4.85
5917 7266 3.306294 GGAGAATTGCCCAAAAGAACTGG 60.306 47.826 0.00 0.00 0.00 4.00
5918 7267 3.306294 GGGAGAATTGCCCAAAAGAACTG 60.306 47.826 7.89 0.00 45.31 3.16
5919 7268 2.899900 GGGAGAATTGCCCAAAAGAACT 59.100 45.455 7.89 0.00 45.31 3.01
5920 7269 3.319137 GGGAGAATTGCCCAAAAGAAC 57.681 47.619 7.89 0.00 45.31 3.01
5933 7282 1.570979 GGGGGTCAATTCTGGGAGAAT 59.429 52.381 0.00 0.00 46.22 2.40
5934 7283 0.999712 GGGGGTCAATTCTGGGAGAA 59.000 55.000 0.00 0.00 38.78 2.87
5935 7284 0.121197 AGGGGGTCAATTCTGGGAGA 59.879 55.000 0.00 0.00 0.00 3.71
5936 7285 0.548510 GAGGGGGTCAATTCTGGGAG 59.451 60.000 0.00 0.00 0.00 4.30
5937 7286 0.919289 GGAGGGGGTCAATTCTGGGA 60.919 60.000 0.00 0.00 0.00 4.37
5938 7287 1.615262 GGAGGGGGTCAATTCTGGG 59.385 63.158 0.00 0.00 0.00 4.45
5939 7288 1.615262 GGGAGGGGGTCAATTCTGG 59.385 63.158 0.00 0.00 0.00 3.86
5940 7289 1.214305 TGGGGAGGGGGTCAATTCTG 61.214 60.000 0.00 0.00 0.00 3.02
5941 7290 0.921256 CTGGGGAGGGGGTCAATTCT 60.921 60.000 0.00 0.00 0.00 2.40
5942 7291 1.615262 CTGGGGAGGGGGTCAATTC 59.385 63.158 0.00 0.00 0.00 2.17
5943 7292 2.626467 GCTGGGGAGGGGGTCAATT 61.626 63.158 0.00 0.00 0.00 2.32
5944 7293 3.023735 GCTGGGGAGGGGGTCAAT 61.024 66.667 0.00 0.00 0.00 2.57
5945 7294 3.829311 AAGCTGGGGAGGGGGTCAA 62.829 63.158 0.00 0.00 0.00 3.18
5946 7295 4.285790 AAGCTGGGGAGGGGGTCA 62.286 66.667 0.00 0.00 0.00 4.02
5947 7296 3.412408 GAAGCTGGGGAGGGGGTC 61.412 72.222 0.00 0.00 0.00 4.46
5953 7302 3.415087 CTGGGGGAAGCTGGGGAG 61.415 72.222 0.00 0.00 0.00 4.30
5954 7303 2.805827 ATTCTGGGGGAAGCTGGGGA 62.806 60.000 0.00 0.00 37.36 4.81
5955 7304 1.878799 AATTCTGGGGGAAGCTGGGG 61.879 60.000 0.00 0.00 37.36 4.96
5956 7305 0.685458 CAATTCTGGGGGAAGCTGGG 60.685 60.000 0.00 0.00 37.36 4.45
5957 7306 1.325476 GCAATTCTGGGGGAAGCTGG 61.325 60.000 0.00 0.00 37.36 4.85
5958 7307 1.325476 GGCAATTCTGGGGGAAGCTG 61.325 60.000 0.00 0.00 37.36 4.24
5959 7308 1.000866 GGCAATTCTGGGGGAAGCT 59.999 57.895 0.00 0.00 37.36 3.74
5960 7309 1.305213 TGGCAATTCTGGGGGAAGC 60.305 57.895 0.00 0.00 37.36 3.86
5961 7310 0.040204 AGTGGCAATTCTGGGGGAAG 59.960 55.000 0.00 0.00 37.36 3.46
5962 7311 0.486879 AAGTGGCAATTCTGGGGGAA 59.513 50.000 0.00 0.00 38.41 3.97
5963 7312 0.039618 GAAGTGGCAATTCTGGGGGA 59.960 55.000 19.51 0.00 0.00 4.81
5964 7313 0.251742 TGAAGTGGCAATTCTGGGGG 60.252 55.000 25.65 0.00 0.00 5.40
5965 7314 1.753073 GATGAAGTGGCAATTCTGGGG 59.247 52.381 25.65 0.00 0.00 4.96
5966 7315 2.731572 AGATGAAGTGGCAATTCTGGG 58.268 47.619 25.65 0.00 0.00 4.45
5967 7316 4.796038 AAAGATGAAGTGGCAATTCTGG 57.204 40.909 25.65 0.00 0.00 3.86
5989 7338 9.662947 GACCTTAACTAGCTAGGAATTGTAAAA 57.337 33.333 24.35 1.45 33.21 1.52
5990 7339 9.043548 AGACCTTAACTAGCTAGGAATTGTAAA 57.956 33.333 24.35 6.07 33.21 2.01
5991 7340 8.605325 AGACCTTAACTAGCTAGGAATTGTAA 57.395 34.615 24.35 10.98 33.21 2.41
5992 7341 9.705103 TTAGACCTTAACTAGCTAGGAATTGTA 57.295 33.333 24.35 8.34 33.21 2.41
5993 7342 8.605325 TTAGACCTTAACTAGCTAGGAATTGT 57.395 34.615 24.35 14.92 33.21 2.71
5997 7346 8.858094 GCTAATTAGACCTTAACTAGCTAGGAA 58.142 37.037 24.35 16.07 33.21 3.36
5998 7347 8.226112 AGCTAATTAGACCTTAACTAGCTAGGA 58.774 37.037 24.35 9.48 33.21 2.94
5999 7348 8.411991 AGCTAATTAGACCTTAACTAGCTAGG 57.588 38.462 24.35 11.75 35.14 3.02
6001 7350 9.517868 CCTAGCTAATTAGACCTTAACTAGCTA 57.482 37.037 16.85 13.29 29.48 3.32
6002 7351 8.226112 TCCTAGCTAATTAGACCTTAACTAGCT 58.774 37.037 16.85 12.62 29.48 3.32
6003 7352 8.406730 TCCTAGCTAATTAGACCTTAACTAGC 57.593 38.462 16.85 0.00 29.48 3.42
6007 7356 9.833917 ACAATTCCTAGCTAATTAGACCTTAAC 57.166 33.333 16.85 0.00 0.00 2.01
6036 7385 6.213195 TCCCAGAATTGCCACTTGATATTTTT 59.787 34.615 0.00 0.00 0.00 1.94
6037 7386 5.721000 TCCCAGAATTGCCACTTGATATTTT 59.279 36.000 0.00 0.00 0.00 1.82
6038 7387 5.271598 TCCCAGAATTGCCACTTGATATTT 58.728 37.500 0.00 0.00 0.00 1.40
6039 7388 4.870636 TCCCAGAATTGCCACTTGATATT 58.129 39.130 0.00 0.00 0.00 1.28
6040 7389 4.166725 TCTCCCAGAATTGCCACTTGATAT 59.833 41.667 0.00 0.00 0.00 1.63
6041 7390 3.523157 TCTCCCAGAATTGCCACTTGATA 59.477 43.478 0.00 0.00 0.00 2.15
6042 7391 2.309755 TCTCCCAGAATTGCCACTTGAT 59.690 45.455 0.00 0.00 0.00 2.57
6043 7392 1.704628 TCTCCCAGAATTGCCACTTGA 59.295 47.619 0.00 0.00 0.00 3.02
6044 7393 2.205022 TCTCCCAGAATTGCCACTTG 57.795 50.000 0.00 0.00 0.00 3.16
6045 7394 2.800250 CTTCTCCCAGAATTGCCACTT 58.200 47.619 0.00 0.00 33.13 3.16
6046 7395 1.615384 GCTTCTCCCAGAATTGCCACT 60.615 52.381 0.00 0.00 33.13 4.00
6047 7396 0.813821 GCTTCTCCCAGAATTGCCAC 59.186 55.000 0.00 0.00 33.13 5.01
6048 7397 0.700564 AGCTTCTCCCAGAATTGCCA 59.299 50.000 0.00 0.00 33.13 4.92
6049 7398 1.101331 CAGCTTCTCCCAGAATTGCC 58.899 55.000 0.00 0.00 33.13 4.52
6050 7399 1.101331 CCAGCTTCTCCCAGAATTGC 58.899 55.000 0.00 0.00 33.13 3.56
6051 7400 1.684248 CCCCAGCTTCTCCCAGAATTG 60.684 57.143 0.00 0.00 33.13 2.32
6052 7401 0.627986 CCCCAGCTTCTCCCAGAATT 59.372 55.000 0.00 0.00 33.13 2.17
6053 7402 0.253347 TCCCCAGCTTCTCCCAGAAT 60.253 55.000 0.00 0.00 33.13 2.40
6054 7403 0.911525 CTCCCCAGCTTCTCCCAGAA 60.912 60.000 0.00 0.00 32.50 3.02
6055 7404 1.306482 CTCCCCAGCTTCTCCCAGA 60.306 63.158 0.00 0.00 0.00 3.86
6056 7405 2.373707 CCTCCCCAGCTTCTCCCAG 61.374 68.421 0.00 0.00 0.00 4.45
6057 7406 2.285668 CCTCCCCAGCTTCTCCCA 60.286 66.667 0.00 0.00 0.00 4.37
6058 7407 3.093172 CCCTCCCCAGCTTCTCCC 61.093 72.222 0.00 0.00 0.00 4.30
6059 7408 3.093172 CCCCTCCCCAGCTTCTCC 61.093 72.222 0.00 0.00 0.00 3.71
6060 7409 3.093172 CCCCCTCCCCAGCTTCTC 61.093 72.222 0.00 0.00 0.00 2.87
6061 7410 3.952799 GACCCCCTCCCCAGCTTCT 62.953 68.421 0.00 0.00 0.00 2.85
6062 7411 3.412408 GACCCCCTCCCCAGCTTC 61.412 72.222 0.00 0.00 0.00 3.86
6063 7412 3.829311 TTGACCCCCTCCCCAGCTT 62.829 63.158 0.00 0.00 0.00 3.74
6064 7413 3.603330 ATTGACCCCCTCCCCAGCT 62.603 63.158 0.00 0.00 0.00 4.24
6065 7414 2.573893 GAATTGACCCCCTCCCCAGC 62.574 65.000 0.00 0.00 0.00 4.85
6066 7415 0.921256 AGAATTGACCCCCTCCCCAG 60.921 60.000 0.00 0.00 0.00 4.45
6067 7416 1.165782 AGAATTGACCCCCTCCCCA 59.834 57.895 0.00 0.00 0.00 4.96
6068 7417 1.615262 CAGAATTGACCCCCTCCCC 59.385 63.158 0.00 0.00 0.00 4.81
6069 7418 1.615262 CCAGAATTGACCCCCTCCC 59.385 63.158 0.00 0.00 0.00 4.30
6070 7419 0.919289 TCCCAGAATTGACCCCCTCC 60.919 60.000 0.00 0.00 0.00 4.30
6071 7420 0.548510 CTCCCAGAATTGACCCCCTC 59.451 60.000 0.00 0.00 0.00 4.30
6072 7421 0.121197 TCTCCCAGAATTGACCCCCT 59.879 55.000 0.00 0.00 0.00 4.79
6073 7422 0.999712 TTCTCCCAGAATTGACCCCC 59.000 55.000 0.00 0.00 0.00 5.40
6086 7435 4.462834 CCAGTTCTTTTGGGTAATTCTCCC 59.537 45.833 10.64 10.64 44.81 4.30
6087 7436 4.082190 GCCAGTTCTTTTGGGTAATTCTCC 60.082 45.833 0.00 0.00 36.19 3.71
6088 7437 4.082190 GGCCAGTTCTTTTGGGTAATTCTC 60.082 45.833 0.00 0.00 36.19 2.87
6089 7438 3.832490 GGCCAGTTCTTTTGGGTAATTCT 59.168 43.478 0.00 0.00 36.19 2.40
6090 7439 3.056107 GGGCCAGTTCTTTTGGGTAATTC 60.056 47.826 4.39 0.00 36.19 2.17
6091 7440 2.903784 GGGCCAGTTCTTTTGGGTAATT 59.096 45.455 4.39 0.00 36.19 1.40
6092 7441 2.536066 GGGCCAGTTCTTTTGGGTAAT 58.464 47.619 4.39 0.00 36.19 1.89
6093 7442 1.481615 GGGGCCAGTTCTTTTGGGTAA 60.482 52.381 4.39 0.00 36.19 2.85
6094 7443 0.113580 GGGGCCAGTTCTTTTGGGTA 59.886 55.000 4.39 0.00 36.19 3.69
6095 7444 1.152333 GGGGCCAGTTCTTTTGGGT 60.152 57.895 4.39 0.00 36.19 4.51
6096 7445 0.407918 TAGGGGCCAGTTCTTTTGGG 59.592 55.000 4.39 0.00 36.19 4.12
6097 7446 2.302587 TTAGGGGCCAGTTCTTTTGG 57.697 50.000 4.39 0.00 38.78 3.28
6098 7447 3.165071 ACATTAGGGGCCAGTTCTTTTG 58.835 45.455 4.39 0.79 0.00 2.44
6099 7448 3.542969 ACATTAGGGGCCAGTTCTTTT 57.457 42.857 4.39 0.00 0.00 2.27
6100 7449 3.542969 AACATTAGGGGCCAGTTCTTT 57.457 42.857 4.39 0.00 0.00 2.52
6101 7450 3.591977 ACTAACATTAGGGGCCAGTTCTT 59.408 43.478 4.39 0.00 35.08 2.52
6102 7451 3.190439 ACTAACATTAGGGGCCAGTTCT 58.810 45.455 4.39 0.00 35.08 3.01
6103 7452 3.646736 ACTAACATTAGGGGCCAGTTC 57.353 47.619 4.39 0.00 35.08 3.01
6104 7453 3.591977 AGAACTAACATTAGGGGCCAGTT 59.408 43.478 4.39 3.25 35.08 3.16
6105 7454 3.054361 CAGAACTAACATTAGGGGCCAGT 60.054 47.826 4.39 0.00 35.08 4.00
6106 7455 3.199946 TCAGAACTAACATTAGGGGCCAG 59.800 47.826 4.39 0.00 35.08 4.85
6107 7456 3.054655 GTCAGAACTAACATTAGGGGCCA 60.055 47.826 4.39 0.00 35.08 5.36
6108 7457 3.542648 GTCAGAACTAACATTAGGGGCC 58.457 50.000 0.00 0.00 35.08 5.80
6109 7458 3.054655 TGGTCAGAACTAACATTAGGGGC 60.055 47.826 3.79 0.00 35.08 5.80
6110 7459 4.837093 TGGTCAGAACTAACATTAGGGG 57.163 45.455 3.79 0.00 35.08 4.79
6111 7460 6.884832 TGTATGGTCAGAACTAACATTAGGG 58.115 40.000 3.79 0.00 35.08 3.53
6112 7461 8.830580 CAATGTATGGTCAGAACTAACATTAGG 58.169 37.037 14.84 4.88 35.08 2.69
6133 7482 1.904865 CTGCCACAGCCACCAATGT 60.905 57.895 0.00 0.00 38.69 2.71
6144 7493 1.770658 CCCAAGATATCTCCTGCCACA 59.229 52.381 5.51 0.00 0.00 4.17
6205 7554 5.620206 TGTTTCCTCTGCTCAAGAATAACA 58.380 37.500 0.00 0.00 33.37 2.41
6385 7734 2.485426 CTCAATCCTTGCTCGCTTTGAA 59.515 45.455 0.00 0.00 0.00 2.69
6388 7737 2.191128 ACTCAATCCTTGCTCGCTTT 57.809 45.000 0.00 0.00 0.00 3.51
6415 7764 2.558380 AATGGCTTTCCCTCCCTCGC 62.558 60.000 0.00 0.00 0.00 5.03
6422 7771 0.107165 GCTCGGTAATGGCTTTCCCT 60.107 55.000 0.00 0.00 0.00 4.20
6423 7772 1.101635 GGCTCGGTAATGGCTTTCCC 61.102 60.000 0.00 0.00 0.00 3.97
6508 7857 2.708386 AGTGTCGTCTTCTTTCTCCG 57.292 50.000 0.00 0.00 0.00 4.63
6671 8022 2.047655 CTGCCGGCTGGTTAACGA 60.048 61.111 29.70 1.91 37.67 3.85
6672 8023 2.047655 TCTGCCGGCTGGTTAACG 60.048 61.111 30.13 8.10 37.67 3.18
6743 8096 4.621034 GGTTGCATATTTTACACAGCACAC 59.379 41.667 0.00 0.00 0.00 3.82
6744 8097 4.321601 GGGTTGCATATTTTACACAGCACA 60.322 41.667 0.00 0.00 0.00 4.57
7140 8494 4.831155 CCCTCTATGATACCGGACTAACAA 59.169 45.833 9.46 0.00 0.00 2.83
7141 8495 4.141088 ACCCTCTATGATACCGGACTAACA 60.141 45.833 9.46 0.00 0.00 2.41
7160 8514 1.195115 ACGATATCAGCACACACCCT 58.805 50.000 3.12 0.00 0.00 4.34
7163 8517 3.254060 ACTCAACGATATCAGCACACAC 58.746 45.455 3.12 0.00 0.00 3.82
7168 8522 6.593770 ACATTACAAACTCAACGATATCAGCA 59.406 34.615 3.12 0.00 0.00 4.41
7175 8529 5.277779 CCACACACATTACAAACTCAACGAT 60.278 40.000 0.00 0.00 0.00 3.73
7220 8574 8.963130 TGCAGAAAAGTGAATAAAATACAAACG 58.037 29.630 0.00 0.00 0.00 3.60
7227 8581 9.768662 AATGAGTTGCAGAAAAGTGAATAAAAT 57.231 25.926 0.00 0.00 0.00 1.82
7245 8599 3.131709 AGACACCACCAGAATGAGTTG 57.868 47.619 0.00 0.00 39.69 3.16
7251 8605 3.264193 TGCATCTTAGACACCACCAGAAT 59.736 43.478 0.00 0.00 0.00 2.40
7252 8606 2.637382 TGCATCTTAGACACCACCAGAA 59.363 45.455 0.00 0.00 0.00 3.02
7282 8636 4.005487 TGCCATTGCTGCAAAAATAAGT 57.995 36.364 20.06 0.00 38.71 2.24
7298 8652 1.136305 GATGTGCTGCTCAAATGCCAT 59.864 47.619 8.59 0.00 0.00 4.40
7299 8653 0.528924 GATGTGCTGCTCAAATGCCA 59.471 50.000 8.59 0.00 0.00 4.92
7317 8671 0.684535 TGAAATGCAGACTCCGTGGA 59.315 50.000 0.00 0.00 0.00 4.02
7355 8709 3.833732 AGCTGATCGGACAGAAGGTATA 58.166 45.455 5.48 0.00 39.94 1.47
7401 8756 3.994392 GCGACAAGAATTCTAGAACCACA 59.006 43.478 8.75 0.00 0.00 4.17
7402 8757 3.371285 GGCGACAAGAATTCTAGAACCAC 59.629 47.826 8.75 2.48 0.00 4.16
7427 8782 2.026262 GGCATTTGTAGAACCTCCCTCA 60.026 50.000 0.00 0.00 0.00 3.86
7430 8785 2.369394 CTGGCATTTGTAGAACCTCCC 58.631 52.381 0.00 0.00 0.00 4.30
7450 8805 5.922544 CAGGCTGCTTATTTTTATATGTGCC 59.077 40.000 0.00 0.00 36.11 5.01
7460 8815 4.119442 CTGCAATCAGGCTGCTTATTTT 57.881 40.909 10.34 0.00 40.59 1.82
7497 8859 4.155826 CGTGATTGGGCTATCAAAAGAACA 59.844 41.667 4.78 0.00 36.37 3.18
7556 8918 3.491964 CGATCGGGGTAGTAGCATTTTGA 60.492 47.826 7.38 0.00 0.00 2.69
7560 8922 1.612463 GTCGATCGGGGTAGTAGCATT 59.388 52.381 16.41 0.00 0.00 3.56
7569 8931 1.519408 CAAACAAAGTCGATCGGGGT 58.481 50.000 16.41 3.87 0.00 4.95
7576 8938 2.341846 AAGGCTCCAAACAAAGTCGA 57.658 45.000 0.00 0.00 0.00 4.20
7578 8940 4.336280 AGGATAAGGCTCCAAACAAAGTC 58.664 43.478 0.00 0.00 37.81 3.01
7579 8941 4.388577 AGGATAAGGCTCCAAACAAAGT 57.611 40.909 0.00 0.00 37.81 2.66
7580 8942 4.336713 GCTAGGATAAGGCTCCAAACAAAG 59.663 45.833 0.00 0.00 37.81 2.77
7581 8943 4.270008 GCTAGGATAAGGCTCCAAACAAA 58.730 43.478 0.00 0.00 37.81 2.83
7587 8949 1.412710 CAACGCTAGGATAAGGCTCCA 59.587 52.381 0.00 0.00 37.81 3.86
7620 8982 2.104963 GGGTTTGGACTGTCTCTGTCTT 59.895 50.000 7.85 0.00 33.75 3.01
7621 8983 1.694696 GGGTTTGGACTGTCTCTGTCT 59.305 52.381 7.85 0.00 33.75 3.41
7622 8984 1.416401 TGGGTTTGGACTGTCTCTGTC 59.584 52.381 7.85 0.00 0.00 3.51
7623 8985 1.507140 TGGGTTTGGACTGTCTCTGT 58.493 50.000 7.85 0.00 0.00 3.41
7624 8986 2.867109 ATGGGTTTGGACTGTCTCTG 57.133 50.000 7.85 0.00 0.00 3.35
7625 8987 2.711009 TGAATGGGTTTGGACTGTCTCT 59.289 45.455 7.85 0.00 0.00 3.10
7626 8988 3.140325 TGAATGGGTTTGGACTGTCTC 57.860 47.619 7.85 0.00 0.00 3.36
7627 8989 3.814504 ATGAATGGGTTTGGACTGTCT 57.185 42.857 7.85 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.