Multiple sequence alignment - TraesCS7A01G274200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G274200 chr7A 100.000 2714 0 0 1 2714 287498741 287501454 0.000000e+00 5012
1 TraesCS7A01G274200 chr7A 93.415 1382 59 17 417 1775 287491551 287492923 0.000000e+00 2019
2 TraesCS7A01G274200 chr7A 92.263 1383 82 16 410 1775 287525834 287527208 0.000000e+00 1938
3 TraesCS7A01G274200 chr7A 91.324 219 17 1 2498 2714 716399040 716399258 5.680000e-77 298
4 TraesCS7A01G274200 chr7D 95.765 1228 39 5 1286 2505 264052648 264053870 0.000000e+00 1967
5 TraesCS7A01G274200 chr7D 92.020 1391 87 16 417 1790 264034236 264035619 0.000000e+00 1932
6 TraesCS7A01G274200 chr7D 84.703 1497 169 38 1001 2469 264026872 264028336 0.000000e+00 1441
7 TraesCS7A01G274200 chr7D 90.955 984 61 16 818 1790 264054301 264055267 0.000000e+00 1299
8 TraesCS7A01G274200 chr7D 88.596 570 47 12 417 969 264044633 264045201 0.000000e+00 676
9 TraesCS7A01G274200 chr7D 96.375 331 11 1 957 1287 264047453 264047782 6.610000e-151 544
10 TraesCS7A01G274200 chr7D 89.677 155 13 3 222 373 567728398 567728552 7.670000e-46 195
11 TraesCS7A01G274200 chr7B 92.788 1234 79 4 550 1773 244409617 244410850 0.000000e+00 1777
12 TraesCS7A01G274200 chr7B 90.730 1219 95 7 574 1775 244404675 244405892 0.000000e+00 1609
13 TraesCS7A01G274200 chr7B 86.792 1272 140 14 1001 2248 244394122 244395389 0.000000e+00 1393
14 TraesCS7A01G274200 chr7B 91.964 224 18 0 1 224 721316098 721316321 5.640000e-82 315
15 TraesCS7A01G274200 chr7B 88.462 260 21 6 2252 2505 244395459 244395715 3.400000e-79 305
16 TraesCS7A01G274200 chr7B 92.647 136 10 0 219 354 115356614 115356749 2.130000e-46 196
17 TraesCS7A01G274200 chr7B 89.032 155 13 2 223 373 361572122 361572276 3.570000e-44 189
18 TraesCS7A01G274200 chr6A 98.122 213 4 0 2502 2714 420952262 420952474 3.300000e-99 372
19 TraesCS7A01G274200 chr6A 97.170 212 6 0 2503 2714 579110428 579110217 2.570000e-95 359
20 TraesCS7A01G274200 chr6A 95.775 213 5 1 2506 2714 186999837 187000049 9.310000e-90 340
21 TraesCS7A01G274200 chr6D 95.982 224 9 0 1 224 289510773 289510996 5.520000e-97 364
22 TraesCS7A01G274200 chr6D 91.964 224 18 0 1 224 461650931 461651154 5.640000e-82 315
23 TraesCS7A01G274200 chr6D 93.382 136 9 0 222 357 116858452 116858317 4.580000e-48 202
24 TraesCS7A01G274200 chr1A 97.183 213 6 0 2502 2714 98591799 98592011 7.140000e-96 361
25 TraesCS7A01G274200 chr1A 93.985 133 8 0 225 357 589613549 589613417 4.580000e-48 202
26 TraesCS7A01G274200 chr5D 94.196 224 13 0 1 224 544489040 544489263 2.590000e-90 342
27 TraesCS7A01G274200 chr3A 96.190 210 7 1 2505 2714 46013597 46013805 2.590000e-90 342
28 TraesCS7A01G274200 chr1D 94.144 222 13 0 1 222 451197494 451197715 3.350000e-89 339
29 TraesCS7A01G274200 chr3D 93.694 222 14 0 3 224 598603315 598603536 1.560000e-87 333
30 TraesCS7A01G274200 chr3D 93.382 136 9 0 222 357 449119490 449119355 4.580000e-48 202
31 TraesCS7A01G274200 chr3D 92.647 136 10 0 222 357 905352 905217 2.130000e-46 196
32 TraesCS7A01G274200 chr5B 92.857 224 16 0 1 224 693951293 693951516 2.610000e-85 326
33 TraesCS7A01G274200 chr5B 92.857 224 16 0 1 224 693953809 693954032 2.610000e-85 326
34 TraesCS7A01G274200 chr5B 89.952 209 18 2 2504 2712 473602131 473601926 1.600000e-67 267
35 TraesCS7A01G274200 chr5B 93.939 132 8 0 222 353 712875244 712875113 1.650000e-47 200
36 TraesCS7A01G274200 chr4D 92.411 224 17 0 1 224 380340379 380340156 1.210000e-83 320
37 TraesCS7A01G274200 chr4B 91.667 216 16 2 2499 2712 58033906 58034121 5.680000e-77 298
38 TraesCS7A01G274200 chr4A 90.000 210 19 2 2505 2712 674632223 674632014 1.240000e-68 270
39 TraesCS7A01G274200 chr6B 91.608 143 10 1 222 362 493115281 493115139 2.130000e-46 196


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G274200 chr7A 287498741 287501454 2713 False 5012 5012 100.0000 1 2714 1 chr7A.!!$F2 2713
1 TraesCS7A01G274200 chr7A 287491551 287492923 1372 False 2019 2019 93.4150 417 1775 1 chr7A.!!$F1 1358
2 TraesCS7A01G274200 chr7A 287525834 287527208 1374 False 1938 1938 92.2630 410 1775 1 chr7A.!!$F3 1365
3 TraesCS7A01G274200 chr7D 264034236 264035619 1383 False 1932 1932 92.0200 417 1790 1 chr7D.!!$F2 1373
4 TraesCS7A01G274200 chr7D 264052648 264055267 2619 False 1633 1967 93.3600 818 2505 2 chr7D.!!$F5 1687
5 TraesCS7A01G274200 chr7D 264026872 264028336 1464 False 1441 1441 84.7030 1001 2469 1 chr7D.!!$F1 1468
6 TraesCS7A01G274200 chr7D 264044633 264047782 3149 False 610 676 92.4855 417 1287 2 chr7D.!!$F4 870
7 TraesCS7A01G274200 chr7B 244404675 244410850 6175 False 1693 1777 91.7590 550 1775 2 chr7B.!!$F5 1225
8 TraesCS7A01G274200 chr7B 244394122 244395715 1593 False 849 1393 87.6270 1001 2505 2 chr7B.!!$F4 1504
9 TraesCS7A01G274200 chr5B 693951293 693954032 2739 False 326 326 92.8570 1 224 2 chr5B.!!$F1 223

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 650 0.179009 ACACCAGTGCTGCAACTCAT 60.179 50.0 2.77 0.0 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 10399 0.46362 CAGGGAACTAGAGCTCAGGC 59.536 60.0 17.77 7.86 40.21 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.690778 GGAGCGGTGTGGCATCAAC 61.691 63.158 0.00 0.00 34.64 3.18
27 28 0.650512 GTGTGGCATCAACCGTATCG 59.349 55.000 0.00 0.00 0.00 2.92
67 68 1.986757 ATGGCGCAGTGGAGACTCT 60.987 57.895 10.83 0.00 33.64 3.24
109 110 0.748729 CTCGCGTAGGAGGAGGAAGT 60.749 60.000 5.77 0.00 0.00 3.01
114 115 2.448453 CGTAGGAGGAGGAAGTTGTCT 58.552 52.381 0.00 0.00 0.00 3.41
128 129 3.127533 GTCTGGCGTCATGGTGGC 61.128 66.667 0.00 0.00 0.00 5.01
206 207 2.899900 CCGATGGAAGATGGAGGTCATA 59.100 50.000 0.00 0.00 35.97 2.15
262 378 6.602410 TCATCAAGAGGATAGGAATAGCAG 57.398 41.667 0.00 0.00 33.95 4.24
265 381 4.282957 TCAAGAGGATAGGAATAGCAGCAG 59.717 45.833 0.00 0.00 0.00 4.24
279 395 3.266964 GCAGCGTTGCCAAGATGA 58.733 55.556 13.92 0.00 44.74 2.92
312 428 7.663081 CAGGCTTATTGATGTATCACCTTGTAT 59.337 37.037 0.00 0.00 36.36 2.29
360 484 3.333189 CATGCATCGTCGAGGCCG 61.333 66.667 27.02 15.49 38.67 6.13
384 508 5.746990 AGGTACATCCTAGAATATGCACC 57.253 43.478 11.38 11.38 46.10 5.01
386 510 5.606749 AGGTACATCCTAGAATATGCACCAA 59.393 40.000 17.44 0.00 46.10 3.67
388 512 4.392940 ACATCCTAGAATATGCACCAAGC 58.607 43.478 0.00 0.00 45.96 4.01
398 522 2.629656 GCACCAAGCATGCTTCCGT 61.630 57.895 29.81 23.87 44.79 4.69
401 525 1.019278 ACCAAGCATGCTTCCGTACG 61.019 55.000 29.81 17.00 33.42 3.67
402 526 0.739462 CCAAGCATGCTTCCGTACGA 60.739 55.000 29.81 0.00 33.42 3.43
403 527 1.075542 CAAGCATGCTTCCGTACGAA 58.924 50.000 29.81 8.33 33.42 3.85
404 528 1.076332 AAGCATGCTTCCGTACGAAC 58.924 50.000 27.21 3.31 0.00 3.95
414 538 3.000164 CGTACGAACGGCGAACTTA 58.000 52.632 16.62 1.92 45.50 2.24
415 539 1.326576 CGTACGAACGGCGAACTTAA 58.673 50.000 16.62 0.00 45.50 1.85
454 578 5.294356 AGCAAAATACTGTTCGTGTAGTCA 58.706 37.500 0.00 0.00 0.00 3.41
497 621 0.389025 CTGCCCTTTTGTTGTGGGAC 59.611 55.000 0.91 0.00 43.47 4.46
514 638 1.668419 GACTGCTGAAACACACCAGT 58.332 50.000 0.00 0.00 44.87 4.00
525 649 1.096967 CACACCAGTGCTGCAACTCA 61.097 55.000 2.77 0.00 39.21 3.41
526 650 0.179009 ACACCAGTGCTGCAACTCAT 60.179 50.000 2.77 0.00 0.00 2.90
527 651 0.520404 CACCAGTGCTGCAACTCATC 59.480 55.000 2.77 0.00 0.00 2.92
528 652 0.607489 ACCAGTGCTGCAACTCATCC 60.607 55.000 2.77 0.00 0.00 3.51
529 653 0.322277 CCAGTGCTGCAACTCATCCT 60.322 55.000 2.77 0.00 0.00 3.24
532 656 2.417933 CAGTGCTGCAACTCATCCTAAC 59.582 50.000 2.77 0.00 0.00 2.34
533 657 1.394917 GTGCTGCAACTCATCCTAACG 59.605 52.381 2.77 0.00 0.00 3.18
534 658 1.001974 TGCTGCAACTCATCCTAACGT 59.998 47.619 0.00 0.00 0.00 3.99
535 659 2.076863 GCTGCAACTCATCCTAACGTT 58.923 47.619 5.88 5.88 0.00 3.99
536 660 2.159653 GCTGCAACTCATCCTAACGTTG 60.160 50.000 11.99 0.68 39.64 4.10
539 663 2.356135 CAACTCATCCTAACGTTGGGG 58.644 52.381 27.99 20.34 34.61 4.96
542 666 2.027469 ACTCATCCTAACGTTGGGGAAC 60.027 50.000 27.99 0.00 32.53 3.62
571 4965 7.464710 GCGGAGAACAAGACTAAACTAATCATG 60.465 40.741 0.00 0.00 0.00 3.07
590 4984 1.890041 TCAGCAACACGAAACCCGG 60.890 57.895 0.00 0.00 43.93 5.73
611 5005 4.441913 CGGATTGCATTTCCTTGGCTAATT 60.442 41.667 12.84 0.00 0.00 1.40
622 5016 5.769835 TCCTTGGCTAATTTTCCATGATCT 58.230 37.500 0.00 0.00 31.37 2.75
668 5064 0.867746 TCAATGAACACTCGTGCAGC 59.132 50.000 0.00 0.00 32.77 5.25
704 5106 2.513204 CCGAGACATGCCAGGCAG 60.513 66.667 21.51 14.22 43.65 4.85
947 6276 1.069049 CCCTTGTCTTGCCAACCTTTG 59.931 52.381 0.00 0.00 0.00 2.77
1139 9456 0.960364 ACGGCATGCGAAGGTTTGAT 60.960 50.000 12.44 0.00 0.00 2.57
1338 9858 3.892918 CAAGAGCTCTTGTTGGTTCTG 57.107 47.619 37.56 17.89 46.11 3.02
1355 9875 4.023291 GTTCTGAAGAGAGGAGAGGATGT 58.977 47.826 0.00 0.00 0.00 3.06
1496 10152 5.415077 CAGAAGCAAGAGAGATCACCATTTT 59.585 40.000 0.00 0.00 0.00 1.82
1592 10274 2.754552 TGCAGAAGAGCAAAGTTGTGTT 59.245 40.909 0.00 0.00 42.46 3.32
1650 10332 2.614520 CGAAGATCTTGAGAGCGGAGTA 59.385 50.000 14.00 0.00 35.26 2.59
1659 10341 3.422796 TGAGAGCGGAGTAGAACTTCTT 58.577 45.455 0.00 0.00 0.00 2.52
1717 10399 9.809096 TTCTCAATGCTCTTAGTTTGTAGATAG 57.191 33.333 0.00 0.00 0.00 2.08
1739 10422 0.323451 TGAGCTCTAGTTCCCTGCGA 60.323 55.000 16.19 0.00 0.00 5.10
1743 10426 1.576356 CTCTAGTTCCCTGCGATTGC 58.424 55.000 0.00 0.00 43.20 3.56
1784 10467 6.475076 GGATTAGTCGATCATCATCATAGCAC 59.525 42.308 0.00 0.00 0.00 4.40
1821 10505 6.534475 ACAATTGTGGATATGTGCAGAAAT 57.466 33.333 11.07 0.00 32.89 2.17
1832 10517 8.682710 GGATATGTGCAGAAATTTACTTAACCA 58.317 33.333 0.00 0.00 0.00 3.67
1839 10524 7.043059 TGCAGAAATTTACTTAACCAAAAAGCG 60.043 33.333 0.00 0.00 0.00 4.68
1944 10635 7.873505 ACTAACTGACTTGGTTTCTCATAACTC 59.126 37.037 0.00 0.00 0.00 3.01
1956 10647 8.722394 GGTTTCTCATAACTCGAAGAAAAGATT 58.278 33.333 8.81 0.00 34.09 2.40
1973 10664 9.447157 AGAAAAGATTTCTCTCCTCAAACATAG 57.553 33.333 0.00 0.00 0.00 2.23
2017 10708 4.103342 ACAATAACATGGAATTTGGGGCT 58.897 39.130 0.00 0.00 0.00 5.19
2154 10881 0.955178 ACTCAGAGTCACAGGTGTCG 59.045 55.000 0.00 0.00 0.00 4.35
2189 10916 0.944386 TGAAACAAGCCAGCTCGAAC 59.056 50.000 0.00 0.00 0.00 3.95
2228 10962 2.039746 TGCATTATCATTACCGAGGGGG 59.960 50.000 0.00 0.00 43.62 5.40
2250 11059 5.879223 GGGAATACCTAATGATGCTGATGAG 59.121 44.000 0.00 0.00 35.85 2.90
2251 11060 6.471146 GGAATACCTAATGATGCTGATGAGT 58.529 40.000 0.00 0.00 0.00 3.41
2252 11061 6.370994 GGAATACCTAATGATGCTGATGAGTG 59.629 42.308 0.00 0.00 0.00 3.51
2253 11062 6.676990 ATACCTAATGATGCTGATGAGTGA 57.323 37.500 0.00 0.00 0.00 3.41
2254 11063 5.563876 ACCTAATGATGCTGATGAGTGAT 57.436 39.130 0.00 0.00 0.00 3.06
2255 11064 5.938279 ACCTAATGATGCTGATGAGTGATT 58.062 37.500 0.00 0.00 0.00 2.57
2256 11065 7.071069 ACCTAATGATGCTGATGAGTGATTA 57.929 36.000 0.00 0.00 0.00 1.75
2273 11082 8.486210 TGAGTGATTACTAACAATAATCAGGCT 58.514 33.333 7.51 3.54 45.30 4.58
2298 11107 6.194796 ACACATGCAACCAATAATACTGAC 57.805 37.500 0.00 0.00 0.00 3.51
2301 11110 5.357878 ACATGCAACCAATAATACTGACCAG 59.642 40.000 0.00 0.00 0.00 4.00
2311 11120 7.201821 CCAATAATACTGACCAGAACAAATCCC 60.202 40.741 3.76 0.00 0.00 3.85
2326 11135 5.510430 ACAAATCCCCTGAAGATCCTTAAC 58.490 41.667 0.00 0.00 0.00 2.01
2335 11144 7.213678 CCCTGAAGATCCTTAACTCTTATCAC 58.786 42.308 0.00 0.00 31.99 3.06
2374 11183 6.547141 CCCTTCTGCTTCCAAATGATACAATA 59.453 38.462 0.00 0.00 0.00 1.90
2392 11201 9.831054 GATACAATAAACTTCACGTTTCTATCG 57.169 33.333 0.00 0.00 44.39 2.92
2395 11204 4.905412 AAACTTCACGTTTCTATCGCTC 57.095 40.909 0.00 0.00 41.93 5.03
2399 11208 3.687572 TCACGTTTCTATCGCTCTACC 57.312 47.619 0.00 0.00 0.00 3.18
2403 11212 2.545526 CGTTTCTATCGCTCTACCGGTA 59.454 50.000 14.95 14.95 0.00 4.02
2414 11223 4.201685 CGCTCTACCGGTAATGTTCAAAAG 60.202 45.833 16.65 1.18 0.00 2.27
2420 11229 5.227152 ACCGGTAATGTTCAAAAGAATTGC 58.773 37.500 4.49 0.00 0.00 3.56
2471 11280 1.420138 ACCAGAAGTCGACCAAACCAT 59.580 47.619 13.01 0.00 0.00 3.55
2472 11281 2.158667 ACCAGAAGTCGACCAAACCATT 60.159 45.455 13.01 0.00 0.00 3.16
2473 11282 3.071892 ACCAGAAGTCGACCAAACCATTA 59.928 43.478 13.01 0.00 0.00 1.90
2474 11283 4.069304 CCAGAAGTCGACCAAACCATTAA 58.931 43.478 13.01 0.00 0.00 1.40
2475 11284 4.154195 CCAGAAGTCGACCAAACCATTAAG 59.846 45.833 13.01 0.00 0.00 1.85
2476 11285 4.755123 CAGAAGTCGACCAAACCATTAAGT 59.245 41.667 13.01 0.00 0.00 2.24
2477 11286 4.755123 AGAAGTCGACCAAACCATTAAGTG 59.245 41.667 13.01 0.00 0.00 3.16
2484 11299 6.920758 TCGACCAAACCATTAAGTGATTTTTG 59.079 34.615 0.00 0.00 0.00 2.44
2505 11320 5.769484 TGGTTTTTGCGACCATAACTTTA 57.231 34.783 0.00 0.00 42.06 1.85
2506 11321 5.521544 TGGTTTTTGCGACCATAACTTTAC 58.478 37.500 0.00 0.00 42.06 2.01
2507 11322 4.919168 GGTTTTTGCGACCATAACTTTACC 59.081 41.667 0.00 0.00 37.14 2.85
2508 11323 4.407496 TTTTGCGACCATAACTTTACCG 57.593 40.909 0.00 0.00 0.00 4.02
2509 11324 3.316071 TTGCGACCATAACTTTACCGA 57.684 42.857 0.00 0.00 0.00 4.69
2510 11325 3.316071 TGCGACCATAACTTTACCGAA 57.684 42.857 0.00 0.00 0.00 4.30
2511 11326 3.661944 TGCGACCATAACTTTACCGAAA 58.338 40.909 0.00 0.00 0.00 3.46
2512 11327 4.063689 TGCGACCATAACTTTACCGAAAA 58.936 39.130 0.00 0.00 0.00 2.29
2513 11328 4.514441 TGCGACCATAACTTTACCGAAAAA 59.486 37.500 0.00 0.00 0.00 1.94
2514 11329 5.084055 GCGACCATAACTTTACCGAAAAAG 58.916 41.667 7.62 7.62 41.35 2.27
2515 11330 5.624292 CGACCATAACTTTACCGAAAAAGG 58.376 41.667 12.25 0.00 40.16 3.11
2516 11331 5.381174 ACCATAACTTTACCGAAAAAGGC 57.619 39.130 12.25 0.00 40.16 4.35
2517 11332 5.074804 ACCATAACTTTACCGAAAAAGGCT 58.925 37.500 12.25 0.00 40.16 4.58
2518 11333 5.537295 ACCATAACTTTACCGAAAAAGGCTT 59.463 36.000 12.25 0.00 40.16 4.35
2519 11334 6.041182 ACCATAACTTTACCGAAAAAGGCTTT 59.959 34.615 6.68 6.68 40.16 3.51
2520 11335 6.584942 CCATAACTTTACCGAAAAAGGCTTTC 59.415 38.462 13.76 0.41 40.16 2.62
2522 11337 2.691984 TTACCGAAAAAGGCTTTCGC 57.308 45.000 13.76 7.41 46.89 4.70
2532 11347 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
2533 11348 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
2534 11349 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
2535 11350 1.607148 GCTTTCGCCCCGCTTTATATT 59.393 47.619 0.00 0.00 0.00 1.28
2536 11351 2.809696 GCTTTCGCCCCGCTTTATATTA 59.190 45.455 0.00 0.00 0.00 0.98
2537 11352 3.439129 GCTTTCGCCCCGCTTTATATTAT 59.561 43.478 0.00 0.00 0.00 1.28
2538 11353 4.632688 GCTTTCGCCCCGCTTTATATTATA 59.367 41.667 0.00 0.00 0.00 0.98
2539 11354 5.122711 GCTTTCGCCCCGCTTTATATTATAA 59.877 40.000 0.00 0.00 0.00 0.98
2540 11355 6.348704 GCTTTCGCCCCGCTTTATATTATAAA 60.349 38.462 8.26 8.26 0.00 1.40
2541 11356 6.730960 TTCGCCCCGCTTTATATTATAAAG 57.269 37.500 23.28 23.28 37.53 1.85
2552 11367 7.569639 TTTATATTATAAAGCCAACCGCACA 57.430 32.000 5.01 0.00 41.38 4.57
2553 11368 7.569639 TTATATTATAAAGCCAACCGCACAA 57.430 32.000 0.00 0.00 41.38 3.33
2554 11369 6.648879 ATATTATAAAGCCAACCGCACAAT 57.351 33.333 0.00 0.00 41.38 2.71
2555 11370 7.753309 ATATTATAAAGCCAACCGCACAATA 57.247 32.000 0.00 0.00 41.38 1.90
2556 11371 5.899120 TTATAAAGCCAACCGCACAATAA 57.101 34.783 0.00 0.00 41.38 1.40
2557 11372 4.792521 ATAAAGCCAACCGCACAATAAA 57.207 36.364 0.00 0.00 41.38 1.40
2558 11373 2.432206 AAGCCAACCGCACAATAAAC 57.568 45.000 0.00 0.00 41.38 2.01
2559 11374 1.323412 AGCCAACCGCACAATAAACA 58.677 45.000 0.00 0.00 41.38 2.83
2560 11375 1.892474 AGCCAACCGCACAATAAACAT 59.108 42.857 0.00 0.00 41.38 2.71
2561 11376 2.094752 AGCCAACCGCACAATAAACATC 60.095 45.455 0.00 0.00 41.38 3.06
2562 11377 2.874849 CCAACCGCACAATAAACATCC 58.125 47.619 0.00 0.00 0.00 3.51
2563 11378 2.230025 CCAACCGCACAATAAACATCCA 59.770 45.455 0.00 0.00 0.00 3.41
2564 11379 3.305676 CCAACCGCACAATAAACATCCAA 60.306 43.478 0.00 0.00 0.00 3.53
2565 11380 3.569250 ACCGCACAATAAACATCCAAC 57.431 42.857 0.00 0.00 0.00 3.77
2566 11381 2.887783 ACCGCACAATAAACATCCAACA 59.112 40.909 0.00 0.00 0.00 3.33
2567 11382 3.241701 CCGCACAATAAACATCCAACAC 58.758 45.455 0.00 0.00 0.00 3.32
2568 11383 3.304996 CCGCACAATAAACATCCAACACA 60.305 43.478 0.00 0.00 0.00 3.72
2569 11384 3.913763 CGCACAATAAACATCCAACACAG 59.086 43.478 0.00 0.00 0.00 3.66
2570 11385 4.320129 CGCACAATAAACATCCAACACAGA 60.320 41.667 0.00 0.00 0.00 3.41
2571 11386 4.917415 GCACAATAAACATCCAACACAGAC 59.083 41.667 0.00 0.00 0.00 3.51
2572 11387 5.460646 CACAATAAACATCCAACACAGACC 58.539 41.667 0.00 0.00 0.00 3.85
2573 11388 5.009510 CACAATAAACATCCAACACAGACCA 59.990 40.000 0.00 0.00 0.00 4.02
2574 11389 5.596361 ACAATAAACATCCAACACAGACCAA 59.404 36.000 0.00 0.00 0.00 3.67
2575 11390 5.705609 ATAAACATCCAACACAGACCAAC 57.294 39.130 0.00 0.00 0.00 3.77
2576 11391 2.727123 ACATCCAACACAGACCAACA 57.273 45.000 0.00 0.00 0.00 3.33
2577 11392 2.297701 ACATCCAACACAGACCAACAC 58.702 47.619 0.00 0.00 0.00 3.32
2578 11393 2.296792 CATCCAACACAGACCAACACA 58.703 47.619 0.00 0.00 0.00 3.72
2579 11394 1.745232 TCCAACACAGACCAACACAC 58.255 50.000 0.00 0.00 0.00 3.82
2580 11395 0.738389 CCAACACAGACCAACACACC 59.262 55.000 0.00 0.00 0.00 4.16
2581 11396 1.458398 CAACACAGACCAACACACCA 58.542 50.000 0.00 0.00 0.00 4.17
2582 11397 1.132262 CAACACAGACCAACACACCAC 59.868 52.381 0.00 0.00 0.00 4.16
2583 11398 0.326595 ACACAGACCAACACACCACA 59.673 50.000 0.00 0.00 0.00 4.17
2584 11399 1.271652 ACACAGACCAACACACCACAA 60.272 47.619 0.00 0.00 0.00 3.33
2585 11400 1.815613 CACAGACCAACACACCACAAA 59.184 47.619 0.00 0.00 0.00 2.83
2586 11401 1.816224 ACAGACCAACACACCACAAAC 59.184 47.619 0.00 0.00 0.00 2.93
2587 11402 1.815613 CAGACCAACACACCACAAACA 59.184 47.619 0.00 0.00 0.00 2.83
2588 11403 1.816224 AGACCAACACACCACAAACAC 59.184 47.619 0.00 0.00 0.00 3.32
2589 11404 1.542030 GACCAACACACCACAAACACA 59.458 47.619 0.00 0.00 0.00 3.72
2590 11405 1.271102 ACCAACACACCACAAACACAC 59.729 47.619 0.00 0.00 0.00 3.82
2591 11406 1.270826 CCAACACACCACAAACACACA 59.729 47.619 0.00 0.00 0.00 3.72
2592 11407 2.323959 CAACACACCACAAACACACAC 58.676 47.619 0.00 0.00 0.00 3.82
2593 11408 1.610363 ACACACCACAAACACACACA 58.390 45.000 0.00 0.00 0.00 3.72
2594 11409 1.268352 ACACACCACAAACACACACAC 59.732 47.619 0.00 0.00 0.00 3.82
2595 11410 1.268079 CACACCACAAACACACACACA 59.732 47.619 0.00 0.00 0.00 3.72
2596 11411 1.268352 ACACCACAAACACACACACAC 59.732 47.619 0.00 0.00 0.00 3.82
2597 11412 0.519519 ACCACAAACACACACACACG 59.480 50.000 0.00 0.00 0.00 4.49
2598 11413 0.179176 CCACAAACACACACACACGG 60.179 55.000 0.00 0.00 0.00 4.94
2599 11414 0.799393 CACAAACACACACACACGGA 59.201 50.000 0.00 0.00 0.00 4.69
2600 11415 1.083489 ACAAACACACACACACGGAG 58.917 50.000 0.00 0.00 0.00 4.63
2601 11416 0.376852 CAAACACACACACACGGAGG 59.623 55.000 0.00 0.00 0.00 4.30
2602 11417 0.035820 AAACACACACACACGGAGGT 60.036 50.000 0.00 0.00 0.00 3.85
2603 11418 0.461339 AACACACACACACGGAGGTC 60.461 55.000 0.00 0.00 0.00 3.85
2604 11419 1.594293 CACACACACACGGAGGTCC 60.594 63.158 0.00 0.00 0.00 4.46
2605 11420 2.061578 ACACACACACGGAGGTCCA 61.062 57.895 0.00 0.00 35.14 4.02
2606 11421 1.594293 CACACACACGGAGGTCCAC 60.594 63.158 0.00 0.00 35.14 4.02
2607 11422 2.061578 ACACACACGGAGGTCCACA 61.062 57.895 0.00 0.00 35.14 4.17
2608 11423 1.300931 CACACACGGAGGTCCACAG 60.301 63.158 0.00 0.00 35.14 3.66
2609 11424 2.343758 CACACGGAGGTCCACAGG 59.656 66.667 0.00 0.00 35.14 4.00
2610 11425 2.200370 ACACGGAGGTCCACAGGA 59.800 61.111 0.00 0.00 35.14 3.86
2611 11426 1.458777 ACACGGAGGTCCACAGGAA 60.459 57.895 0.00 0.00 31.38 3.36
2612 11427 1.004918 CACGGAGGTCCACAGGAAC 60.005 63.158 0.00 0.00 40.27 3.62
2613 11428 2.214920 ACGGAGGTCCACAGGAACC 61.215 63.158 0.00 0.00 41.02 3.62
2614 11429 2.214216 CGGAGGTCCACAGGAACCA 61.214 63.158 0.00 0.00 41.02 3.67
2615 11430 1.375326 GGAGGTCCACAGGAACCAC 59.625 63.158 0.00 0.00 41.02 4.16
2616 11431 1.415672 GGAGGTCCACAGGAACCACA 61.416 60.000 0.00 0.00 41.02 4.17
2617 11432 0.472471 GAGGTCCACAGGAACCACAA 59.528 55.000 0.00 0.00 41.02 3.33
2618 11433 0.923358 AGGTCCACAGGAACCACAAA 59.077 50.000 0.00 0.00 41.02 2.83
2619 11434 1.133792 AGGTCCACAGGAACCACAAAG 60.134 52.381 0.00 0.00 41.02 2.77
2620 11435 1.318576 GTCCACAGGAACCACAAAGG 58.681 55.000 0.00 0.00 45.67 3.11
2632 11447 1.960689 CCACAAAGGTACACCAAAGGG 59.039 52.381 0.38 0.00 38.89 3.95
2644 11459 2.338577 CCAAAGGGTCATAGCTGAGG 57.661 55.000 0.00 0.00 30.18 3.86
2645 11460 1.133976 CCAAAGGGTCATAGCTGAGGG 60.134 57.143 0.00 0.00 30.18 4.30
2646 11461 0.548510 AAAGGGTCATAGCTGAGGGC 59.451 55.000 0.00 0.00 42.19 5.19
2647 11462 0.621571 AAGGGTCATAGCTGAGGGCA 60.622 55.000 0.00 0.00 44.79 5.36
2648 11463 1.147153 GGGTCATAGCTGAGGGCAC 59.853 63.158 0.00 0.00 44.79 5.01
2649 11464 1.626356 GGGTCATAGCTGAGGGCACA 61.626 60.000 0.00 0.00 44.79 4.57
2650 11465 0.179062 GGTCATAGCTGAGGGCACAG 60.179 60.000 0.00 6.57 44.79 3.66
2656 11471 3.348236 CTGAGGGCACAGCACAAC 58.652 61.111 0.00 0.00 32.33 3.32
2657 11472 1.526686 CTGAGGGCACAGCACAACA 60.527 57.895 0.00 0.00 32.33 3.33
2658 11473 1.077140 TGAGGGCACAGCACAACAA 60.077 52.632 0.00 0.00 32.33 2.83
2659 11474 1.102809 TGAGGGCACAGCACAACAAG 61.103 55.000 0.00 0.00 32.33 3.16
2660 11475 2.028043 GGGCACAGCACAACAAGC 59.972 61.111 0.00 0.00 0.00 4.01
2661 11476 2.028043 GGCACAGCACAACAAGCC 59.972 61.111 0.00 0.00 34.71 4.35
2662 11477 2.028043 GCACAGCACAACAAGCCC 59.972 61.111 0.00 0.00 0.00 5.19
2663 11478 2.492773 GCACAGCACAACAAGCCCT 61.493 57.895 0.00 0.00 0.00 5.19
2664 11479 1.172180 GCACAGCACAACAAGCCCTA 61.172 55.000 0.00 0.00 0.00 3.53
2665 11480 1.317613 CACAGCACAACAAGCCCTAA 58.682 50.000 0.00 0.00 0.00 2.69
2666 11481 1.680735 CACAGCACAACAAGCCCTAAA 59.319 47.619 0.00 0.00 0.00 1.85
2667 11482 2.100584 CACAGCACAACAAGCCCTAAAA 59.899 45.455 0.00 0.00 0.00 1.52
2668 11483 2.100749 ACAGCACAACAAGCCCTAAAAC 59.899 45.455 0.00 0.00 0.00 2.43
2669 11484 1.686587 AGCACAACAAGCCCTAAAACC 59.313 47.619 0.00 0.00 0.00 3.27
2670 11485 1.410882 GCACAACAAGCCCTAAAACCA 59.589 47.619 0.00 0.00 0.00 3.67
2671 11486 2.159028 GCACAACAAGCCCTAAAACCAA 60.159 45.455 0.00 0.00 0.00 3.67
2672 11487 3.680196 GCACAACAAGCCCTAAAACCAAA 60.680 43.478 0.00 0.00 0.00 3.28
2673 11488 4.508662 CACAACAAGCCCTAAAACCAAAA 58.491 39.130 0.00 0.00 0.00 2.44
2674 11489 4.570369 CACAACAAGCCCTAAAACCAAAAG 59.430 41.667 0.00 0.00 0.00 2.27
2675 11490 4.468153 ACAACAAGCCCTAAAACCAAAAGA 59.532 37.500 0.00 0.00 0.00 2.52
2676 11491 4.665833 ACAAGCCCTAAAACCAAAAGAC 57.334 40.909 0.00 0.00 0.00 3.01
2677 11492 3.067601 ACAAGCCCTAAAACCAAAAGACG 59.932 43.478 0.00 0.00 0.00 4.18
2678 11493 1.611977 AGCCCTAAAACCAAAAGACGC 59.388 47.619 0.00 0.00 0.00 5.19
2679 11494 1.338655 GCCCTAAAACCAAAAGACGCA 59.661 47.619 0.00 0.00 0.00 5.24
2680 11495 2.860971 GCCCTAAAACCAAAAGACGCAC 60.861 50.000 0.00 0.00 0.00 5.34
2681 11496 2.603652 CCCTAAAACCAAAAGACGCACG 60.604 50.000 0.00 0.00 0.00 5.34
2682 11497 2.041244 CTAAAACCAAAAGACGCACGC 58.959 47.619 0.00 0.00 0.00 5.34
2683 11498 0.526739 AAAACCAAAAGACGCACGCC 60.527 50.000 0.00 0.00 0.00 5.68
2684 11499 1.658686 AAACCAAAAGACGCACGCCA 61.659 50.000 0.00 0.00 0.00 5.69
2685 11500 2.051345 CCAAAAGACGCACGCCAC 60.051 61.111 0.00 0.00 0.00 5.01
2686 11501 2.712539 CAAAAGACGCACGCCACA 59.287 55.556 0.00 0.00 0.00 4.17
2687 11502 1.063327 CAAAAGACGCACGCCACAA 59.937 52.632 0.00 0.00 0.00 3.33
2688 11503 0.524392 CAAAAGACGCACGCCACAAA 60.524 50.000 0.00 0.00 0.00 2.83
2689 11504 0.524604 AAAAGACGCACGCCACAAAC 60.525 50.000 0.00 0.00 0.00 2.93
2690 11505 2.331019 AAAGACGCACGCCACAAACC 62.331 55.000 0.00 0.00 0.00 3.27
2691 11506 3.578272 GACGCACGCCACAAACCA 61.578 61.111 0.00 0.00 0.00 3.67
2692 11507 3.800323 GACGCACGCCACAAACCAC 62.800 63.158 0.00 0.00 0.00 4.16
2693 11508 3.882013 CGCACGCCACAAACCACA 61.882 61.111 0.00 0.00 0.00 4.17
2694 11509 2.727544 GCACGCCACAAACCACAT 59.272 55.556 0.00 0.00 0.00 3.21
2695 11510 1.846849 CGCACGCCACAAACCACATA 61.847 55.000 0.00 0.00 0.00 2.29
2696 11511 0.109781 GCACGCCACAAACCACATAG 60.110 55.000 0.00 0.00 0.00 2.23
2697 11512 1.518325 CACGCCACAAACCACATAGA 58.482 50.000 0.00 0.00 0.00 1.98
2698 11513 2.083774 CACGCCACAAACCACATAGAT 58.916 47.619 0.00 0.00 0.00 1.98
2699 11514 2.083774 ACGCCACAAACCACATAGATG 58.916 47.619 0.00 0.00 0.00 2.90
2700 11515 1.202177 CGCCACAAACCACATAGATGC 60.202 52.381 0.00 0.00 0.00 3.91
2701 11516 1.134946 GCCACAAACCACATAGATGCC 59.865 52.381 0.00 0.00 0.00 4.40
2702 11517 2.445427 CCACAAACCACATAGATGCCA 58.555 47.619 0.00 0.00 0.00 4.92
2703 11518 2.424601 CCACAAACCACATAGATGCCAG 59.575 50.000 0.00 0.00 0.00 4.85
2704 11519 2.424601 CACAAACCACATAGATGCCAGG 59.575 50.000 0.00 0.00 0.00 4.45
2705 11520 1.406539 CAAACCACATAGATGCCAGGC 59.593 52.381 3.66 3.66 0.00 4.85
2706 11521 0.464373 AACCACATAGATGCCAGGCG 60.464 55.000 7.03 0.00 0.00 5.52
2707 11522 1.598962 CCACATAGATGCCAGGCGG 60.599 63.158 7.03 0.00 0.00 6.13
2708 11523 1.447217 CACATAGATGCCAGGCGGA 59.553 57.895 7.03 0.00 0.00 5.54
2709 11524 0.882042 CACATAGATGCCAGGCGGAC 60.882 60.000 7.03 0.21 0.00 4.79
2710 11525 1.050988 ACATAGATGCCAGGCGGACT 61.051 55.000 7.03 8.43 0.00 3.85
2711 11526 0.969149 CATAGATGCCAGGCGGACTA 59.031 55.000 7.03 10.40 0.00 2.59
2712 11527 1.344438 CATAGATGCCAGGCGGACTAA 59.656 52.381 7.03 0.00 0.00 2.24
2713 11528 1.717032 TAGATGCCAGGCGGACTAAT 58.283 50.000 7.03 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.112341 CCGAGACCCACCGTCGAC 62.112 72.222 5.18 5.18 46.92 4.20
109 110 1.302431 CCACCATGACGCCAGACAA 60.302 57.895 0.00 0.00 0.00 3.18
114 115 4.634703 AACGCCACCATGACGCCA 62.635 61.111 0.00 0.00 0.00 5.69
128 129 0.534412 AGGCCTCTCTGTCATCAACG 59.466 55.000 0.00 0.00 0.00 4.10
158 159 4.285020 TCCTCAGAGTAGAACTGATGCAT 58.715 43.478 0.00 0.00 42.32 3.96
279 395 3.907221 ACATCAATAAGCCTGAAGCCAT 58.093 40.909 0.00 0.00 45.47 4.40
289 405 7.445402 ACCATACAAGGTGATACATCAATAAGC 59.555 37.037 0.00 0.00 41.30 3.09
381 505 0.447801 GTACGGAAGCATGCTTGGTG 59.552 55.000 36.48 25.33 36.26 4.17
383 507 0.739462 TCGTACGGAAGCATGCTTGG 60.739 55.000 36.48 27.48 36.26 3.61
384 508 1.075542 TTCGTACGGAAGCATGCTTG 58.924 50.000 36.48 24.57 36.26 4.01
386 510 1.076533 CGTTCGTACGGAAGCATGCT 61.077 55.000 16.30 16.30 43.94 3.79
398 522 7.928908 AATAATATTAAGTTCGCCGTTCGTA 57.071 32.000 0.00 0.00 39.67 3.43
454 578 4.885907 CCATGTAAGTGGATGCAGATTCTT 59.114 41.667 0.00 0.00 42.02 2.52
514 638 1.001974 ACGTTAGGATGAGTTGCAGCA 59.998 47.619 2.55 0.00 33.64 4.41
520 644 2.262637 TCCCCAACGTTAGGATGAGTT 58.737 47.619 14.81 0.00 0.00 3.01
525 649 1.280998 CTGGTTCCCCAACGTTAGGAT 59.719 52.381 14.81 0.00 41.27 3.24
526 650 0.688487 CTGGTTCCCCAACGTTAGGA 59.312 55.000 14.81 14.21 41.27 2.94
527 651 0.958876 GCTGGTTCCCCAACGTTAGG 60.959 60.000 5.70 5.70 41.27 2.69
528 652 1.296056 CGCTGGTTCCCCAACGTTAG 61.296 60.000 0.00 0.00 43.68 2.34
529 653 1.301874 CGCTGGTTCCCCAACGTTA 60.302 57.895 0.00 0.00 43.68 3.18
533 657 2.359975 CTCCGCTGGTTCCCCAAC 60.360 66.667 0.00 0.00 41.27 3.77
534 658 2.150719 TTCTCCGCTGGTTCCCCAA 61.151 57.895 0.00 0.00 41.27 4.12
535 659 2.528127 TTCTCCGCTGGTTCCCCA 60.528 61.111 0.00 0.00 38.87 4.96
536 660 2.046217 GTTCTCCGCTGGTTCCCC 60.046 66.667 0.00 0.00 0.00 4.81
539 663 1.149148 GTCTTGTTCTCCGCTGGTTC 58.851 55.000 0.00 0.00 0.00 3.62
542 666 2.737252 GTTTAGTCTTGTTCTCCGCTGG 59.263 50.000 0.00 0.00 0.00 4.85
543 667 3.654414 AGTTTAGTCTTGTTCTCCGCTG 58.346 45.455 0.00 0.00 0.00 5.18
544 668 5.464030 TTAGTTTAGTCTTGTTCTCCGCT 57.536 39.130 0.00 0.00 0.00 5.52
545 669 5.867716 TGATTAGTTTAGTCTTGTTCTCCGC 59.132 40.000 0.00 0.00 0.00 5.54
546 670 7.545965 ACATGATTAGTTTAGTCTTGTTCTCCG 59.454 37.037 0.00 0.00 31.75 4.63
547 671 8.779354 ACATGATTAGTTTAGTCTTGTTCTCC 57.221 34.615 0.00 0.00 31.75 3.71
549 673 9.429359 CTGACATGATTAGTTTAGTCTTGTTCT 57.571 33.333 0.00 0.00 34.50 3.01
551 675 7.661437 TGCTGACATGATTAGTTTAGTCTTGTT 59.339 33.333 0.00 0.00 34.50 2.83
553 677 7.601073 TGCTGACATGATTAGTTTAGTCTTG 57.399 36.000 0.00 0.00 0.00 3.02
571 4965 1.278637 CGGGTTTCGTGTTGCTGAC 59.721 57.895 0.00 0.00 0.00 3.51
590 4984 6.037500 GGAAAATTAGCCAAGGAAATGCAATC 59.962 38.462 0.00 0.00 0.00 2.67
622 5016 6.425735 TCGGATCTGGATACGGGTTATATAA 58.574 40.000 14.18 0.00 44.91 0.98
668 5064 1.196808 GGTCATTGGTTACACAGTGCG 59.803 52.381 0.00 0.00 0.00 5.34
678 5074 1.453155 GCATGTCTCGGTCATTGGTT 58.547 50.000 0.00 0.00 0.00 3.67
704 5106 7.518052 GCAAGTGTGAATCAGTGAGCTTATATC 60.518 40.741 0.00 0.00 32.33 1.63
947 6276 4.766375 TCTTCGGTATGGAAATGGAAGAC 58.234 43.478 0.00 0.00 36.07 3.01
1139 9456 3.368843 GCTGTAGATGTCTTCCAGCTTCA 60.369 47.826 19.04 1.91 40.99 3.02
1287 9807 1.942776 TCAGCTCCATCAAGGTCTCA 58.057 50.000 0.00 0.00 39.02 3.27
1338 9858 5.681179 GCAAGTTACATCCTCTCCTCTCTTC 60.681 48.000 0.00 0.00 0.00 2.87
1437 9989 6.385176 TCACCATCCTAGAATCATTCTTGTCT 59.615 38.462 4.90 0.00 41.14 3.41
1479 10135 7.038659 CGAGAAGTAAAATGGTGATCTCTCTT 58.961 38.462 0.00 0.00 31.84 2.85
1496 10152 3.181475 GCAGGATGTGGATTCGAGAAGTA 60.181 47.826 0.00 0.00 39.31 2.24
1592 10274 0.740868 CCGCAATTGCTCCTCTTCGA 60.741 55.000 26.86 0.00 39.32 3.71
1650 10332 7.038017 TGGATCAATCTCCTGTAAAGAAGTTCT 60.038 37.037 0.00 0.00 36.20 3.01
1659 10341 5.721480 TCTGTTCTGGATCAATCTCCTGTAA 59.279 40.000 0.00 0.00 36.10 2.41
1717 10399 0.463620 CAGGGAACTAGAGCTCAGGC 59.536 60.000 17.77 7.86 40.21 4.85
1734 10417 1.033746 AAGGTGGATGGCAATCGCAG 61.034 55.000 0.00 0.00 41.24 5.18
1739 10422 4.824479 CCTTTAAAAGGTGGATGGCAAT 57.176 40.909 0.00 0.00 43.95 3.56
1812 10496 8.061857 GCTTTTTGGTTAAGTAAATTTCTGCAC 58.938 33.333 0.00 0.00 0.00 4.57
1821 10505 7.556733 TCTCTTCGCTTTTTGGTTAAGTAAA 57.443 32.000 0.00 0.00 0.00 2.01
1832 10517 6.456853 GCCAAAATTGTTTCTCTTCGCTTTTT 60.457 34.615 0.00 0.00 0.00 1.94
1839 10524 7.918643 TGAAATTGCCAAAATTGTTTCTCTTC 58.081 30.769 3.08 0.00 0.00 2.87
1902 10589 9.174166 AGTCAGTTAGTCACTTGTTTAACAAAT 57.826 29.630 11.80 0.00 37.69 2.32
1922 10613 5.010719 TCGAGTTATGAGAAACCAAGTCAGT 59.989 40.000 0.00 0.00 0.00 3.41
1944 10635 7.041780 TGTTTGAGGAGAGAAATCTTTTCTTCG 60.042 37.037 4.16 0.00 0.00 3.79
2017 10708 7.581213 AGACAACATTTTATGTGACAGGAAA 57.419 32.000 0.00 0.00 44.07 3.13
2049 10776 7.497595 TCTTGTGACATCACTAGTGTAAAGTT 58.502 34.615 21.99 2.73 45.47 2.66
2051 10778 7.653713 ACTTCTTGTGACATCACTAGTGTAAAG 59.346 37.037 21.99 16.59 45.47 1.85
2082 10809 9.775539 TGAGACTAATAGGCCATTTAGAGATAT 57.224 33.333 23.94 7.71 31.36 1.63
2084 10811 7.180051 CCTGAGACTAATAGGCCATTTAGAGAT 59.820 40.741 23.94 12.96 31.36 2.75
2090 10817 6.824958 TTACCTGAGACTAATAGGCCATTT 57.175 37.500 5.01 0.00 34.93 2.32
2102 10829 6.353951 CCCTTGGGAAATAATTACCTGAGACT 60.354 42.308 0.00 0.00 40.59 3.24
2189 10916 1.670811 GCATAATCACAAGGTCGTGGG 59.329 52.381 0.00 0.00 37.50 4.61
2228 10962 7.157347 TCACTCATCAGCATCATTAGGTATTC 58.843 38.462 0.00 0.00 0.00 1.75
2253 11062 9.899661 TGTGTTAGCCTGATTATTGTTAGTAAT 57.100 29.630 0.00 0.00 0.00 1.89
2254 11063 9.899661 ATGTGTTAGCCTGATTATTGTTAGTAA 57.100 29.630 0.00 0.00 0.00 2.24
2255 11064 9.325198 CATGTGTTAGCCTGATTATTGTTAGTA 57.675 33.333 0.00 0.00 0.00 1.82
2256 11065 7.201732 GCATGTGTTAGCCTGATTATTGTTAGT 60.202 37.037 0.00 0.00 0.00 2.24
2273 11082 7.148154 GGTCAGTATTATTGGTTGCATGTGTTA 60.148 37.037 0.00 0.00 0.00 2.41
2298 11107 3.439857 TCTTCAGGGGATTTGTTCTGG 57.560 47.619 0.00 0.00 0.00 3.86
2301 11110 4.242336 AGGATCTTCAGGGGATTTGTTC 57.758 45.455 0.00 0.00 0.00 3.18
2311 11120 6.920758 CGTGATAAGAGTTAAGGATCTTCAGG 59.079 42.308 0.00 0.00 37.05 3.86
2326 11135 5.347907 GGAAGGTACAACAACGTGATAAGAG 59.652 44.000 0.00 0.00 0.00 2.85
2335 11144 2.806244 CAGAAGGGAAGGTACAACAACG 59.194 50.000 0.00 0.00 0.00 4.10
2387 11196 4.023450 TGAACATTACCGGTAGAGCGATAG 60.023 45.833 15.20 3.37 0.00 2.08
2392 11201 4.933400 TCTTTTGAACATTACCGGTAGAGC 59.067 41.667 15.20 4.91 0.00 4.09
2395 11204 6.526674 GCAATTCTTTTGAACATTACCGGTAG 59.473 38.462 15.20 6.87 41.77 3.18
2399 11208 6.616260 GCTTGCAATTCTTTTGAACATTACCG 60.616 38.462 0.00 0.00 41.77 4.02
2403 11212 6.664515 CATGCTTGCAATTCTTTTGAACATT 58.335 32.000 0.00 0.00 41.77 2.71
2420 11229 9.563898 CATATATAACTTAATGGTGCATGCTTG 57.436 33.333 20.33 0.00 0.00 4.01
2439 11248 6.213677 GTCGACTTCTGGTTGCACATATATA 58.786 40.000 8.70 0.00 0.00 0.86
2440 11249 5.050490 GTCGACTTCTGGTTGCACATATAT 58.950 41.667 8.70 0.00 0.00 0.86
2441 11250 4.430007 GTCGACTTCTGGTTGCACATATA 58.570 43.478 8.70 0.00 0.00 0.86
2471 11280 6.036191 GGTCGCAAAAACCAAAAATCACTTAA 59.964 34.615 0.00 0.00 36.75 1.85
2472 11281 5.520649 GGTCGCAAAAACCAAAAATCACTTA 59.479 36.000 0.00 0.00 36.75 2.24
2473 11282 4.331443 GGTCGCAAAAACCAAAAATCACTT 59.669 37.500 0.00 0.00 36.75 3.16
2474 11283 3.868661 GGTCGCAAAAACCAAAAATCACT 59.131 39.130 0.00 0.00 36.75 3.41
2475 11284 3.619038 TGGTCGCAAAAACCAAAAATCAC 59.381 39.130 0.00 0.00 43.72 3.06
2476 11285 3.861840 TGGTCGCAAAAACCAAAAATCA 58.138 36.364 0.00 0.00 43.72 2.57
2484 11299 4.919168 GGTAAAGTTATGGTCGCAAAAACC 59.081 41.667 0.00 0.00 37.31 3.27
2516 11331 6.730960 TTATAATATAAAGCGGGGCGAAAG 57.269 37.500 0.00 0.00 0.00 2.62
2517 11332 6.348704 GCTTTATAATATAAAGCGGGGCGAAA 60.349 38.462 30.20 0.57 46.31 3.46
2518 11333 5.122711 GCTTTATAATATAAAGCGGGGCGAA 59.877 40.000 30.20 0.00 46.31 4.70
2519 11334 4.632688 GCTTTATAATATAAAGCGGGGCGA 59.367 41.667 30.20 0.05 46.31 5.54
2520 11335 4.905269 GCTTTATAATATAAAGCGGGGCG 58.095 43.478 30.20 10.34 46.31 6.13
2527 11342 7.644490 TGTGCGGTTGGCTTTATAATATAAAG 58.356 34.615 22.11 22.11 44.05 1.85
2528 11343 7.569639 TGTGCGGTTGGCTTTATAATATAAA 57.430 32.000 5.46 5.46 44.05 1.40
2529 11344 7.569639 TTGTGCGGTTGGCTTTATAATATAA 57.430 32.000 0.00 0.00 44.05 0.98
2530 11345 7.753309 ATTGTGCGGTTGGCTTTATAATATA 57.247 32.000 0.00 0.00 44.05 0.86
2531 11346 6.648879 ATTGTGCGGTTGGCTTTATAATAT 57.351 33.333 0.00 0.00 44.05 1.28
2532 11347 7.569639 TTATTGTGCGGTTGGCTTTATAATA 57.430 32.000 0.00 0.00 44.05 0.98
2533 11348 6.458232 TTATTGTGCGGTTGGCTTTATAAT 57.542 33.333 0.00 0.00 44.05 1.28
2534 11349 5.899120 TTATTGTGCGGTTGGCTTTATAA 57.101 34.783 0.00 0.00 44.05 0.98
2535 11350 5.183331 TGTTTATTGTGCGGTTGGCTTTATA 59.817 36.000 0.00 0.00 44.05 0.98
2536 11351 4.021894 TGTTTATTGTGCGGTTGGCTTTAT 60.022 37.500 0.00 0.00 44.05 1.40
2537 11352 3.318275 TGTTTATTGTGCGGTTGGCTTTA 59.682 39.130 0.00 0.00 44.05 1.85
2538 11353 2.101582 TGTTTATTGTGCGGTTGGCTTT 59.898 40.909 0.00 0.00 44.05 3.51
2539 11354 1.683917 TGTTTATTGTGCGGTTGGCTT 59.316 42.857 0.00 0.00 44.05 4.35
2540 11355 1.323412 TGTTTATTGTGCGGTTGGCT 58.677 45.000 0.00 0.00 44.05 4.75
2541 11356 2.258755 GATGTTTATTGTGCGGTTGGC 58.741 47.619 0.00 0.00 43.96 4.52
2542 11357 2.230025 TGGATGTTTATTGTGCGGTTGG 59.770 45.455 0.00 0.00 0.00 3.77
2543 11358 3.567576 TGGATGTTTATTGTGCGGTTG 57.432 42.857 0.00 0.00 0.00 3.77
2544 11359 3.319405 TGTTGGATGTTTATTGTGCGGTT 59.681 39.130 0.00 0.00 0.00 4.44
2545 11360 2.887783 TGTTGGATGTTTATTGTGCGGT 59.112 40.909 0.00 0.00 0.00 5.68
2546 11361 3.241701 GTGTTGGATGTTTATTGTGCGG 58.758 45.455 0.00 0.00 0.00 5.69
2547 11362 3.894920 TGTGTTGGATGTTTATTGTGCG 58.105 40.909 0.00 0.00 0.00 5.34
2548 11363 4.917415 GTCTGTGTTGGATGTTTATTGTGC 59.083 41.667 0.00 0.00 0.00 4.57
2549 11364 5.009510 TGGTCTGTGTTGGATGTTTATTGTG 59.990 40.000 0.00 0.00 0.00 3.33
2550 11365 5.136828 TGGTCTGTGTTGGATGTTTATTGT 58.863 37.500 0.00 0.00 0.00 2.71
2551 11366 5.703978 TGGTCTGTGTTGGATGTTTATTG 57.296 39.130 0.00 0.00 0.00 1.90
2552 11367 5.596361 TGTTGGTCTGTGTTGGATGTTTATT 59.404 36.000 0.00 0.00 0.00 1.40
2553 11368 5.009610 GTGTTGGTCTGTGTTGGATGTTTAT 59.990 40.000 0.00 0.00 0.00 1.40
2554 11369 4.336993 GTGTTGGTCTGTGTTGGATGTTTA 59.663 41.667 0.00 0.00 0.00 2.01
2555 11370 3.130340 GTGTTGGTCTGTGTTGGATGTTT 59.870 43.478 0.00 0.00 0.00 2.83
2556 11371 2.687935 GTGTTGGTCTGTGTTGGATGTT 59.312 45.455 0.00 0.00 0.00 2.71
2557 11372 2.297701 GTGTTGGTCTGTGTTGGATGT 58.702 47.619 0.00 0.00 0.00 3.06
2558 11373 2.033299 GTGTGTTGGTCTGTGTTGGATG 59.967 50.000 0.00 0.00 0.00 3.51
2559 11374 2.297701 GTGTGTTGGTCTGTGTTGGAT 58.702 47.619 0.00 0.00 0.00 3.41
2560 11375 1.680555 GGTGTGTTGGTCTGTGTTGGA 60.681 52.381 0.00 0.00 0.00 3.53
2561 11376 0.738389 GGTGTGTTGGTCTGTGTTGG 59.262 55.000 0.00 0.00 0.00 3.77
2562 11377 1.132262 GTGGTGTGTTGGTCTGTGTTG 59.868 52.381 0.00 0.00 0.00 3.33
2563 11378 1.271652 TGTGGTGTGTTGGTCTGTGTT 60.272 47.619 0.00 0.00 0.00 3.32
2564 11379 0.326595 TGTGGTGTGTTGGTCTGTGT 59.673 50.000 0.00 0.00 0.00 3.72
2565 11380 1.458398 TTGTGGTGTGTTGGTCTGTG 58.542 50.000 0.00 0.00 0.00 3.66
2566 11381 1.816224 GTTTGTGGTGTGTTGGTCTGT 59.184 47.619 0.00 0.00 0.00 3.41
2567 11382 1.815613 TGTTTGTGGTGTGTTGGTCTG 59.184 47.619 0.00 0.00 0.00 3.51
2568 11383 1.816224 GTGTTTGTGGTGTGTTGGTCT 59.184 47.619 0.00 0.00 0.00 3.85
2569 11384 1.542030 TGTGTTTGTGGTGTGTTGGTC 59.458 47.619 0.00 0.00 0.00 4.02
2570 11385 1.271102 GTGTGTTTGTGGTGTGTTGGT 59.729 47.619 0.00 0.00 0.00 3.67
2571 11386 1.270826 TGTGTGTTTGTGGTGTGTTGG 59.729 47.619 0.00 0.00 0.00 3.77
2572 11387 2.287849 TGTGTGTGTTTGTGGTGTGTTG 60.288 45.455 0.00 0.00 0.00 3.33
2573 11388 1.957177 TGTGTGTGTTTGTGGTGTGTT 59.043 42.857 0.00 0.00 0.00 3.32
2574 11389 1.268352 GTGTGTGTGTTTGTGGTGTGT 59.732 47.619 0.00 0.00 0.00 3.72
2575 11390 1.268079 TGTGTGTGTGTTTGTGGTGTG 59.732 47.619 0.00 0.00 0.00 3.82
2576 11391 1.268352 GTGTGTGTGTGTTTGTGGTGT 59.732 47.619 0.00 0.00 0.00 4.16
2577 11392 1.727535 CGTGTGTGTGTGTTTGTGGTG 60.728 52.381 0.00 0.00 0.00 4.17
2578 11393 0.519519 CGTGTGTGTGTGTTTGTGGT 59.480 50.000 0.00 0.00 0.00 4.16
2579 11394 0.179176 CCGTGTGTGTGTGTTTGTGG 60.179 55.000 0.00 0.00 0.00 4.17
2580 11395 0.799393 TCCGTGTGTGTGTGTTTGTG 59.201 50.000 0.00 0.00 0.00 3.33
2581 11396 1.083489 CTCCGTGTGTGTGTGTTTGT 58.917 50.000 0.00 0.00 0.00 2.83
2582 11397 0.376852 CCTCCGTGTGTGTGTGTTTG 59.623 55.000 0.00 0.00 0.00 2.93
2583 11398 0.035820 ACCTCCGTGTGTGTGTGTTT 60.036 50.000 0.00 0.00 0.00 2.83
2584 11399 0.461339 GACCTCCGTGTGTGTGTGTT 60.461 55.000 0.00 0.00 0.00 3.32
2585 11400 1.143183 GACCTCCGTGTGTGTGTGT 59.857 57.895 0.00 0.00 0.00 3.72
2586 11401 1.594293 GGACCTCCGTGTGTGTGTG 60.594 63.158 0.00 0.00 0.00 3.82
2587 11402 2.061578 TGGACCTCCGTGTGTGTGT 61.062 57.895 0.00 0.00 39.43 3.72
2588 11403 1.594293 GTGGACCTCCGTGTGTGTG 60.594 63.158 0.00 0.00 39.43 3.82
2589 11404 2.028125 CTGTGGACCTCCGTGTGTGT 62.028 60.000 0.00 0.00 39.43 3.72
2590 11405 1.300931 CTGTGGACCTCCGTGTGTG 60.301 63.158 0.00 0.00 39.43 3.82
2591 11406 2.507854 CCTGTGGACCTCCGTGTGT 61.508 63.158 0.00 0.00 39.43 3.72
2592 11407 1.754380 TTCCTGTGGACCTCCGTGTG 61.754 60.000 0.00 0.00 39.43 3.82
2593 11408 1.458777 TTCCTGTGGACCTCCGTGT 60.459 57.895 0.00 0.00 39.43 4.49
2594 11409 1.004918 GTTCCTGTGGACCTCCGTG 60.005 63.158 0.00 0.00 39.43 4.94
2595 11410 2.214920 GGTTCCTGTGGACCTCCGT 61.215 63.158 0.00 0.00 39.43 4.69
2596 11411 2.214216 TGGTTCCTGTGGACCTCCG 61.214 63.158 0.00 0.00 39.43 4.63
2597 11412 1.375326 GTGGTTCCTGTGGACCTCC 59.625 63.158 0.00 0.00 0.00 4.30
2598 11413 0.472471 TTGTGGTTCCTGTGGACCTC 59.528 55.000 0.00 0.00 0.00 3.85
2599 11414 0.923358 TTTGTGGTTCCTGTGGACCT 59.077 50.000 0.00 0.00 0.00 3.85
2600 11415 1.318576 CTTTGTGGTTCCTGTGGACC 58.681 55.000 0.00 0.00 0.00 4.46
2601 11416 1.318576 CCTTTGTGGTTCCTGTGGAC 58.681 55.000 0.00 0.00 0.00 4.02
2602 11417 3.819245 CCTTTGTGGTTCCTGTGGA 57.181 52.632 0.00 0.00 0.00 4.02
2610 11425 6.661419 ACCCTTTGGTGTACCTTTGTGGTT 62.661 45.833 2.32 0.00 45.73 3.67
2612 11427 1.960689 CCCTTTGGTGTACCTTTGTGG 59.039 52.381 2.32 0.00 42.93 4.17
2613 11428 2.661718 ACCCTTTGGTGTACCTTTGTG 58.338 47.619 2.32 0.00 45.58 3.33
2625 11440 1.133976 CCCTCAGCTATGACCCTTTGG 60.134 57.143 0.00 0.00 37.80 3.28
2626 11441 1.748591 GCCCTCAGCTATGACCCTTTG 60.749 57.143 0.00 0.00 38.99 2.77
2627 11442 0.548510 GCCCTCAGCTATGACCCTTT 59.451 55.000 0.00 0.00 38.99 3.11
2628 11443 0.621571 TGCCCTCAGCTATGACCCTT 60.622 55.000 0.00 0.00 44.23 3.95
2629 11444 1.003442 TGCCCTCAGCTATGACCCT 59.997 57.895 0.00 0.00 44.23 4.34
2630 11445 1.147153 GTGCCCTCAGCTATGACCC 59.853 63.158 0.00 0.00 44.23 4.46
2631 11446 0.179062 CTGTGCCCTCAGCTATGACC 60.179 60.000 0.00 0.00 44.23 4.02
2632 11447 3.376218 CTGTGCCCTCAGCTATGAC 57.624 57.895 0.00 0.00 44.23 3.06
2639 11454 1.102809 TTGTTGTGCTGTGCCCTCAG 61.103 55.000 0.00 0.00 38.35 3.35
2640 11455 1.077140 TTGTTGTGCTGTGCCCTCA 60.077 52.632 0.00 0.00 0.00 3.86
2641 11456 1.656441 CTTGTTGTGCTGTGCCCTC 59.344 57.895 0.00 0.00 0.00 4.30
2642 11457 2.492773 GCTTGTTGTGCTGTGCCCT 61.493 57.895 0.00 0.00 0.00 5.19
2643 11458 2.028043 GCTTGTTGTGCTGTGCCC 59.972 61.111 0.00 0.00 0.00 5.36
2644 11459 2.028043 GGCTTGTTGTGCTGTGCC 59.972 61.111 0.00 0.00 0.00 5.01
2645 11460 1.172180 TAGGGCTTGTTGTGCTGTGC 61.172 55.000 0.00 0.00 0.00 4.57
2646 11461 1.317613 TTAGGGCTTGTTGTGCTGTG 58.682 50.000 0.00 0.00 0.00 3.66
2647 11462 2.065899 TTTAGGGCTTGTTGTGCTGT 57.934 45.000 0.00 0.00 0.00 4.40
2648 11463 2.545742 GGTTTTAGGGCTTGTTGTGCTG 60.546 50.000 0.00 0.00 0.00 4.41
2649 11464 1.686587 GGTTTTAGGGCTTGTTGTGCT 59.313 47.619 0.00 0.00 0.00 4.40
2650 11465 1.410882 TGGTTTTAGGGCTTGTTGTGC 59.589 47.619 0.00 0.00 0.00 4.57
2651 11466 3.810310 TTGGTTTTAGGGCTTGTTGTG 57.190 42.857 0.00 0.00 0.00 3.33
2652 11467 4.468153 TCTTTTGGTTTTAGGGCTTGTTGT 59.532 37.500 0.00 0.00 0.00 3.32
2653 11468 4.808895 GTCTTTTGGTTTTAGGGCTTGTTG 59.191 41.667 0.00 0.00 0.00 3.33
2654 11469 4.440940 CGTCTTTTGGTTTTAGGGCTTGTT 60.441 41.667 0.00 0.00 0.00 2.83
2655 11470 3.067601 CGTCTTTTGGTTTTAGGGCTTGT 59.932 43.478 0.00 0.00 0.00 3.16
2656 11471 3.638484 CGTCTTTTGGTTTTAGGGCTTG 58.362 45.455 0.00 0.00 0.00 4.01
2657 11472 2.035449 GCGTCTTTTGGTTTTAGGGCTT 59.965 45.455 0.00 0.00 0.00 4.35
2658 11473 1.611977 GCGTCTTTTGGTTTTAGGGCT 59.388 47.619 0.00 0.00 0.00 5.19
2659 11474 1.338655 TGCGTCTTTTGGTTTTAGGGC 59.661 47.619 0.00 0.00 0.00 5.19
2660 11475 2.603652 CGTGCGTCTTTTGGTTTTAGGG 60.604 50.000 0.00 0.00 0.00 3.53
2661 11476 2.646250 CGTGCGTCTTTTGGTTTTAGG 58.354 47.619 0.00 0.00 0.00 2.69
2662 11477 2.041244 GCGTGCGTCTTTTGGTTTTAG 58.959 47.619 0.00 0.00 0.00 1.85
2663 11478 1.268640 GGCGTGCGTCTTTTGGTTTTA 60.269 47.619 0.00 0.00 0.00 1.52
2664 11479 0.526739 GGCGTGCGTCTTTTGGTTTT 60.527 50.000 0.00 0.00 0.00 2.43
2665 11480 1.065109 GGCGTGCGTCTTTTGGTTT 59.935 52.632 0.00 0.00 0.00 3.27
2666 11481 2.115911 TGGCGTGCGTCTTTTGGTT 61.116 52.632 0.00 0.00 0.00 3.67
2667 11482 2.515057 TGGCGTGCGTCTTTTGGT 60.515 55.556 0.00 0.00 0.00 3.67
2668 11483 2.051345 GTGGCGTGCGTCTTTTGG 60.051 61.111 0.00 0.00 0.00 3.28
2669 11484 0.524392 TTTGTGGCGTGCGTCTTTTG 60.524 50.000 0.00 0.00 0.00 2.44
2670 11485 0.524604 GTTTGTGGCGTGCGTCTTTT 60.525 50.000 0.00 0.00 0.00 2.27
2671 11486 1.063488 GTTTGTGGCGTGCGTCTTT 59.937 52.632 0.00 0.00 0.00 2.52
2672 11487 2.713154 GTTTGTGGCGTGCGTCTT 59.287 55.556 0.00 0.00 0.00 3.01
2673 11488 3.276846 GGTTTGTGGCGTGCGTCT 61.277 61.111 0.00 0.00 0.00 4.18
2674 11489 3.578272 TGGTTTGTGGCGTGCGTC 61.578 61.111 0.00 0.00 0.00 5.19
2675 11490 3.883180 GTGGTTTGTGGCGTGCGT 61.883 61.111 0.00 0.00 0.00 5.24
2676 11491 1.846849 TATGTGGTTTGTGGCGTGCG 61.847 55.000 0.00 0.00 0.00 5.34
2677 11492 0.109781 CTATGTGGTTTGTGGCGTGC 60.110 55.000 0.00 0.00 0.00 5.34
2678 11493 1.518325 TCTATGTGGTTTGTGGCGTG 58.482 50.000 0.00 0.00 0.00 5.34
2679 11494 2.083774 CATCTATGTGGTTTGTGGCGT 58.916 47.619 0.00 0.00 0.00 5.68
2680 11495 1.202177 GCATCTATGTGGTTTGTGGCG 60.202 52.381 0.00 0.00 0.00 5.69
2681 11496 1.134946 GGCATCTATGTGGTTTGTGGC 59.865 52.381 0.00 0.00 0.00 5.01
2682 11497 2.424601 CTGGCATCTATGTGGTTTGTGG 59.575 50.000 0.00 0.00 0.00 4.17
2683 11498 2.424601 CCTGGCATCTATGTGGTTTGTG 59.575 50.000 0.00 0.00 0.00 3.33
2684 11499 2.726821 CCTGGCATCTATGTGGTTTGT 58.273 47.619 0.00 0.00 0.00 2.83
2685 11500 1.406539 GCCTGGCATCTATGTGGTTTG 59.593 52.381 15.17 0.00 0.00 2.93
2686 11501 1.767759 GCCTGGCATCTATGTGGTTT 58.232 50.000 15.17 0.00 0.00 3.27
2687 11502 0.464373 CGCCTGGCATCTATGTGGTT 60.464 55.000 20.29 0.00 0.00 3.67
2688 11503 1.146930 CGCCTGGCATCTATGTGGT 59.853 57.895 20.29 0.00 0.00 4.16
2689 11504 1.598962 CCGCCTGGCATCTATGTGG 60.599 63.158 20.29 4.98 0.00 4.17
2690 11505 0.882042 GTCCGCCTGGCATCTATGTG 60.882 60.000 20.29 0.00 34.14 3.21
2691 11506 1.050988 AGTCCGCCTGGCATCTATGT 61.051 55.000 20.29 0.00 34.14 2.29
2692 11507 0.969149 TAGTCCGCCTGGCATCTATG 59.031 55.000 20.29 0.28 34.14 2.23
2693 11508 1.717032 TTAGTCCGCCTGGCATCTAT 58.283 50.000 20.29 2.57 34.14 1.98
2694 11509 1.717032 ATTAGTCCGCCTGGCATCTA 58.283 50.000 20.29 13.83 34.14 1.98
2695 11510 2.532854 ATTAGTCCGCCTGGCATCT 58.467 52.632 20.29 14.81 34.14 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.