Multiple sequence alignment - TraesCS7A01G272500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G272500 chr7A 100.000 2746 0 0 1 2746 285795673 285792928 0.000000e+00 5072.0
1 TraesCS7A01G272500 chr7A 100.000 1492 0 0 2967 4458 285792707 285791216 0.000000e+00 2756.0
2 TraesCS7A01G272500 chr7A 100.000 227 0 0 4232 4458 442623267 442623493 1.920000e-113 420.0
3 TraesCS7A01G272500 chr7A 94.000 50 3 0 1988 2037 426806083 426806132 4.780000e-10 76.8
4 TraesCS7A01G272500 chr7A 100.000 28 0 0 1985 2012 34230597 34230624 8.000000e-03 52.8
5 TraesCS7A01G272500 chr7D 94.488 1270 58 7 2967 4231 263043786 263042524 0.000000e+00 1947.0
6 TraesCS7A01G272500 chr7D 94.352 1080 48 6 1664 2735 263045158 263044084 0.000000e+00 1644.0
7 TraesCS7A01G272500 chr7D 88.959 1114 83 19 83 1180 263046628 263045539 0.000000e+00 1339.0
8 TraesCS7A01G272500 chr7D 93.805 339 11 3 1177 1506 263045488 263045151 6.660000e-138 501.0
9 TraesCS7A01G272500 chr7B 89.832 1190 79 24 2 1180 240487866 240489024 0.000000e+00 1489.0
10 TraesCS7A01G272500 chr7B 95.078 833 38 2 2967 3797 240490502 240491333 0.000000e+00 1308.0
11 TraesCS7A01G272500 chr7B 93.423 593 30 4 2144 2735 240489827 240490411 0.000000e+00 870.0
12 TraesCS7A01G272500 chr7B 95.546 449 13 2 1661 2105 240489375 240489820 0.000000e+00 712.0
13 TraesCS7A01G272500 chr7B 92.045 440 31 3 3779 4217 240491955 240492391 2.280000e-172 616.0
14 TraesCS7A01G272500 chr7B 86.269 335 10 14 1174 1500 240489073 240489379 9.240000e-87 331.0
15 TraesCS7A01G272500 chr7B 93.333 45 3 0 1989 2033 272742625 272742581 2.880000e-07 67.6
16 TraesCS7A01G272500 chr4A 100.000 229 0 0 4230 4458 548655377 548655149 1.480000e-114 424.0
17 TraesCS7A01G272500 chr4A 99.561 228 1 0 4231 4458 144003531 144003758 2.480000e-112 416.0
18 TraesCS7A01G272500 chr4A 80.569 211 41 0 149 359 685783577 685783787 3.570000e-36 163.0
19 TraesCS7A01G272500 chr6B 100.000 228 0 0 4231 4458 149396783 149397010 5.330000e-114 422.0
20 TraesCS7A01G272500 chr6B 95.082 183 7 2 1485 1665 696480064 696480246 2.030000e-73 287.0
21 TraesCS7A01G272500 chr6A 99.559 227 1 0 4232 4458 377630676 377630450 8.920000e-112 414.0
22 TraesCS7A01G272500 chr6A 88.750 160 16 1 2995 3152 47888154 47888313 1.270000e-45 195.0
23 TraesCS7A01G272500 chr1A 99.559 227 1 0 4232 4458 344499515 344499289 8.920000e-112 414.0
24 TraesCS7A01G272500 chr1A 99.559 227 1 0 4232 4458 479867333 479867107 8.920000e-112 414.0
25 TraesCS7A01G272500 chr1A 99.559 227 1 0 4232 4458 513163983 513163757 8.920000e-112 414.0
26 TraesCS7A01G272500 chr1A 97.126 174 3 1 1492 1665 493543618 493543789 4.360000e-75 292.0
27 TraesCS7A01G272500 chr1A 79.325 237 47 2 154 390 554783403 554783169 9.920000e-37 165.0
28 TraesCS7A01G272500 chr1A 100.000 28 0 0 1990 2017 60285737 60285710 8.000000e-03 52.8
29 TraesCS7A01G272500 chr1B 98.707 232 2 1 4227 4458 672349633 672349863 1.150000e-110 411.0
30 TraesCS7A01G272500 chr1B 97.688 173 3 1 1498 1670 67053882 67054053 3.370000e-76 296.0
31 TraesCS7A01G272500 chr1B 82.394 284 28 7 2967 3228 283124374 283124091 1.250000e-55 228.0
32 TraesCS7A01G272500 chr2B 98.256 172 3 0 1502 1673 161144169 161143998 7.250000e-78 302.0
33 TraesCS7A01G272500 chr2B 97.126 174 4 1 1502 1675 800030492 800030664 4.360000e-75 292.0
34 TraesCS7A01G272500 chr3B 98.246 171 3 0 1495 1665 156649797 156649967 2.610000e-77 300.0
35 TraesCS7A01G272500 chr3B 96.154 182 4 3 1486 1665 520150025 520149845 1.210000e-75 294.0
36 TraesCS7A01G272500 chr3B 97.661 171 4 0 1501 1671 731267202 731267032 1.210000e-75 294.0
37 TraesCS7A01G272500 chr2A 98.802 167 2 0 1499 1665 632622110 632622276 9.370000e-77 298.0
38 TraesCS7A01G272500 chr2A 80.660 212 40 1 148 359 118678130 118678340 3.570000e-36 163.0
39 TraesCS7A01G272500 chr2A 96.774 31 1 0 1983 2013 688628825 688628855 8.000000e-03 52.8
40 TraesCS7A01G272500 chr2D 89.894 188 16 2 2967 3152 28646558 28646744 5.760000e-59 239.0
41 TraesCS7A01G272500 chr2D 89.583 48 5 0 1987 2034 126986586 126986539 1.340000e-05 62.1
42 TraesCS7A01G272500 chr5B 98.400 125 2 0 3019 3143 546057453 546057329 2.090000e-53 220.0
43 TraesCS7A01G272500 chr5B 97.059 102 3 0 2313 2414 546057554 546057453 5.930000e-39 172.0
44 TraesCS7A01G272500 chr5B 96.875 96 3 0 3329 3424 546057331 546057236 1.280000e-35 161.0
45 TraesCS7A01G272500 chr5B 96.629 89 3 0 921 1009 546058111 546058023 9.990000e-32 148.0
46 TraesCS7A01G272500 chr5B 98.000 50 1 0 1000 1049 546057601 546057552 2.210000e-13 87.9
47 TraesCS7A01G272500 chr3D 79.424 243 45 5 147 388 561491041 561491279 2.760000e-37 167.0
48 TraesCS7A01G272500 chr3D 78.571 252 47 5 142 391 300618721 300618475 4.620000e-35 159.0
49 TraesCS7A01G272500 chr3D 78.189 243 50 3 148 390 498428580 498428341 7.720000e-33 152.0
50 TraesCS7A01G272500 chr6D 78.926 242 49 2 149 390 454064139 454064378 3.570000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G272500 chr7A 285791216 285795673 4457 True 3914.000000 5072 100.000000 1 4458 2 chr7A.!!$R1 4457
1 TraesCS7A01G272500 chr7D 263042524 263046628 4104 True 1357.750000 1947 92.901000 83 4231 4 chr7D.!!$R1 4148
2 TraesCS7A01G272500 chr7B 240487866 240492391 4525 False 887.666667 1489 92.032167 2 4217 6 chr7B.!!$F1 4215

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
359 366 0.037590 TTGGGAAGTTGCCGTGCTAT 59.962 50.0 9.07 0.00 0.00 2.97 F
1518 1611 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.0 0.00 0.00 0.00 4.12 F
1613 1706 0.098552 CTCATTTTGCGCCGCATGTA 59.901 50.0 14.63 1.01 38.76 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 1687 0.098552 TACATGCGGCGCAAAATGAG 59.901 50.000 39.46 23.91 43.62 2.90 R
3010 3177 0.178953 ATCCTGCTTTGCCTGTTGGT 60.179 50.000 0.00 0.00 35.27 3.67 R
3504 3671 1.992557 ACAAGGATCAGCCCAAGGTAA 59.007 47.619 0.00 0.00 37.37 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.450578 TCTGATGAAGAAGAAAAACTAAGCAA 57.549 30.769 0.00 0.00 29.54 3.91
40 41 9.651913 TGAAGAAGAAAAACTAAGCAATGTTTT 57.348 25.926 7.55 7.55 44.91 2.43
41 42 9.906111 GAAGAAGAAAAACTAAGCAATGTTTTG 57.094 29.630 12.18 0.00 43.04 2.44
42 43 9.651913 AAGAAGAAAAACTAAGCAATGTTTTGA 57.348 25.926 12.18 0.00 43.04 2.69
58 59 9.748708 CAATGTTTTGATGTAAAAAGAGGAGAA 57.251 29.630 0.00 0.00 39.79 2.87
170 175 9.880064 AGACTTTTATTTAGCGAGAAAACTTTC 57.120 29.630 0.00 0.00 37.45 2.62
261 266 3.762288 ACCATCTAGCGACAACTACAAGA 59.238 43.478 0.00 0.00 0.00 3.02
308 313 1.536922 CGTCATCGTCCCTTCCTCATG 60.537 57.143 0.00 0.00 0.00 3.07
321 328 1.302949 CTCATGGGAGCCGGGAAAA 59.697 57.895 2.18 0.00 33.67 2.29
326 333 1.128809 TGGGAGCCGGGAAAACACTA 61.129 55.000 2.18 0.00 0.00 2.74
329 336 2.092807 GGGAGCCGGGAAAACACTATTA 60.093 50.000 2.18 0.00 0.00 0.98
339 346 7.545965 CCGGGAAAACACTATTATAGCAGATAG 59.454 40.741 0.00 0.00 33.17 2.08
344 351 9.561069 AAAACACTATTATAGCAGATAGTTGGG 57.439 33.333 0.00 0.00 37.06 4.12
349 356 9.160412 ACTATTATAGCAGATAGTTGGGAAGTT 57.840 33.333 0.00 0.00 36.02 2.66
359 366 0.037590 TTGGGAAGTTGCCGTGCTAT 59.962 50.000 9.07 0.00 0.00 2.97
378 385 4.502604 GCTATGGGCTTTATAGGACGAACA 60.503 45.833 0.00 0.00 38.06 3.18
383 390 2.934553 GCTTTATAGGACGAACACACCC 59.065 50.000 0.00 0.00 0.00 4.61
398 405 3.073798 ACACACCCAGAACATTATGGTGA 59.926 43.478 13.46 0.00 37.85 4.02
512 520 1.068434 TGTTCACGAGATCAGTGTGCA 59.932 47.619 17.21 14.48 40.28 4.57
551 559 1.674651 GAAACTGCCGGTTCCCTCC 60.675 63.158 1.90 0.00 37.12 4.30
569 577 4.568592 CCCTCCCTTCTTAAGCTTTCATGT 60.569 45.833 3.20 0.00 0.00 3.21
576 584 8.141268 CCCTTCTTAAGCTTTCATGTGTTTTTA 58.859 33.333 3.20 0.00 0.00 1.52
577 585 9.528018 CCTTCTTAAGCTTTCATGTGTTTTTAA 57.472 29.630 3.20 0.00 0.00 1.52
603 611 6.933514 TTTTTAGATGGGAATCAGGCTTTT 57.066 33.333 0.00 0.00 0.00 2.27
608 616 3.386932 TGGGAATCAGGCTTTTATGCT 57.613 42.857 0.00 0.00 0.00 3.79
609 617 3.711863 TGGGAATCAGGCTTTTATGCTT 58.288 40.909 0.00 0.00 0.00 3.91
629 639 1.134250 TGGCTATAATCGCAAGCACCA 60.134 47.619 0.00 0.00 38.01 4.17
630 640 1.946768 GGCTATAATCGCAAGCACCAA 59.053 47.619 0.00 0.00 38.01 3.67
631 641 2.287009 GGCTATAATCGCAAGCACCAAC 60.287 50.000 0.00 0.00 38.01 3.77
632 642 2.287009 GCTATAATCGCAAGCACCAACC 60.287 50.000 0.00 0.00 36.26 3.77
707 718 7.586664 GGCTACAAGTTAAAAGAAAAACTCGAG 59.413 37.037 11.84 11.84 34.91 4.04
708 719 7.586664 GCTACAAGTTAAAAGAAAAACTCGAGG 59.413 37.037 18.41 0.00 34.91 4.63
716 732 2.101917 AGAAAAACTCGAGGTCGGAACA 59.898 45.455 18.41 0.00 40.29 3.18
749 765 1.375523 GCCTTCGTTCCGTCACCAT 60.376 57.895 0.00 0.00 0.00 3.55
755 776 1.069513 TCGTTCCGTCACCATTCAACT 59.930 47.619 0.00 0.00 0.00 3.16
766 787 6.401474 CGTCACCATTCAACTGAAGTCATTAG 60.401 42.308 0.00 0.00 37.48 1.73
908 933 2.664402 ATGTGGCAAGGTCACTTCTT 57.336 45.000 2.44 0.00 39.12 2.52
946 975 2.547595 CCCACCCACCCAGTCCATT 61.548 63.158 0.00 0.00 0.00 3.16
1059 1088 2.895372 GTCAAGGTATGCCCGCGG 60.895 66.667 21.04 21.04 38.74 6.46
1060 1089 3.078196 TCAAGGTATGCCCGCGGA 61.078 61.111 30.73 8.21 38.74 5.54
1121 1150 4.222847 GTCGGATCCGTCTGCCCC 62.223 72.222 32.15 9.96 40.74 5.80
1155 1185 0.522626 TTCGTGCTGTTCGATCCGTA 59.477 50.000 0.00 0.00 37.18 4.02
1307 1391 3.942115 GACTTGGGCAGATCTACTTTTCC 59.058 47.826 0.00 0.00 0.00 3.13
1326 1410 3.572642 TCCGCTAGGTTGATTGATAGGA 58.427 45.455 0.00 0.00 39.05 2.94
1385 1477 5.414144 GCAAGAAAGAGGAAGAGCAAGTTAT 59.586 40.000 0.00 0.00 0.00 1.89
1410 1502 1.418637 ACACGTTAAGGGGCTCTGAAA 59.581 47.619 0.00 0.00 0.00 2.69
1476 1569 4.526970 ACTTAATGGTTGCTATGGTGGAG 58.473 43.478 0.00 0.00 0.00 3.86
1500 1593 5.447413 GCTAGAGCCAACCGAAAAAGAATAC 60.447 44.000 0.00 0.00 34.31 1.89
1501 1594 4.652822 AGAGCCAACCGAAAAAGAATACT 58.347 39.130 0.00 0.00 0.00 2.12
1506 1599 5.163784 GCCAACCGAAAAAGAATACTACTCC 60.164 44.000 0.00 0.00 0.00 3.85
1507 1600 5.353400 CCAACCGAAAAAGAATACTACTCCC 59.647 44.000 0.00 0.00 0.00 4.30
1508 1601 6.171213 CAACCGAAAAAGAATACTACTCCCT 58.829 40.000 0.00 0.00 0.00 4.20
1509 1602 5.975282 ACCGAAAAAGAATACTACTCCCTC 58.025 41.667 0.00 0.00 0.00 4.30
1510 1603 5.105023 ACCGAAAAAGAATACTACTCCCTCC 60.105 44.000 0.00 0.00 0.00 4.30
1511 1604 5.041940 CGAAAAAGAATACTACTCCCTCCG 58.958 45.833 0.00 0.00 0.00 4.63
1512 1605 5.393896 CGAAAAAGAATACTACTCCCTCCGT 60.394 44.000 0.00 0.00 0.00 4.69
1513 1606 6.370186 AAAAAGAATACTACTCCCTCCGTT 57.630 37.500 0.00 0.00 0.00 4.44
1514 1607 5.595257 AAAGAATACTACTCCCTCCGTTC 57.405 43.478 0.00 0.00 0.00 3.95
1515 1608 3.564264 AGAATACTACTCCCTCCGTTCC 58.436 50.000 0.00 0.00 0.00 3.62
1516 1609 2.378378 ATACTACTCCCTCCGTTCCC 57.622 55.000 0.00 0.00 0.00 3.97
1517 1610 1.002069 TACTACTCCCTCCGTTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1518 1611 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1519 1612 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
1520 1613 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
1521 1614 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1522 1615 1.558294 ACTCCCTCCGTTCCCAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
1523 1616 1.838077 CTCCCTCCGTTCCCAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
1524 1617 2.238898 CTCCCTCCGTTCCCAAATACTT 59.761 50.000 0.00 0.00 0.00 2.24
1525 1618 2.026636 TCCCTCCGTTCCCAAATACTTG 60.027 50.000 0.00 0.00 0.00 3.16
1526 1619 2.290705 CCCTCCGTTCCCAAATACTTGT 60.291 50.000 0.00 0.00 0.00 3.16
1527 1620 3.007635 CCTCCGTTCCCAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
1528 1621 3.307480 CCTCCGTTCCCAAATACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1529 1622 4.324267 CTCCGTTCCCAAATACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
1530 1623 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
1531 1624 4.758165 TCCGTTCCCAAATACTTGTCTTTC 59.242 41.667 0.00 0.00 0.00 2.62
1532 1625 4.760204 CCGTTCCCAAATACTTGTCTTTCT 59.240 41.667 0.00 0.00 0.00 2.52
1533 1626 5.935789 CCGTTCCCAAATACTTGTCTTTCTA 59.064 40.000 0.00 0.00 0.00 2.10
1534 1627 6.092259 CCGTTCCCAAATACTTGTCTTTCTAG 59.908 42.308 0.00 0.00 0.00 2.43
1535 1628 6.092259 CGTTCCCAAATACTTGTCTTTCTAGG 59.908 42.308 0.00 0.00 0.00 3.02
1536 1629 5.497474 TCCCAAATACTTGTCTTTCTAGGC 58.503 41.667 0.00 0.00 0.00 3.93
1537 1630 5.013704 TCCCAAATACTTGTCTTTCTAGGCA 59.986 40.000 0.00 0.00 33.22 4.75
1538 1631 5.888161 CCCAAATACTTGTCTTTCTAGGCAT 59.112 40.000 0.00 0.00 35.56 4.40
1539 1632 6.378280 CCCAAATACTTGTCTTTCTAGGCATT 59.622 38.462 0.00 0.00 35.56 3.56
1540 1633 7.093771 CCCAAATACTTGTCTTTCTAGGCATTT 60.094 37.037 0.00 0.00 35.56 2.32
1541 1634 7.970614 CCAAATACTTGTCTTTCTAGGCATTTC 59.029 37.037 0.00 0.00 35.56 2.17
1542 1635 8.514594 CAAATACTTGTCTTTCTAGGCATTTCA 58.485 33.333 0.00 0.00 35.56 2.69
1543 1636 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
1544 1637 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
1545 1638 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
1546 1639 7.373493 ACTTGTCTTTCTAGGCATTTCAAATG 58.627 34.615 5.68 5.68 35.56 2.32
1547 1640 6.271488 TGTCTTTCTAGGCATTTCAAATGG 57.729 37.500 12.14 0.00 29.10 3.16
1548 1641 6.009589 TGTCTTTCTAGGCATTTCAAATGGA 58.990 36.000 12.14 0.00 29.10 3.41
1549 1642 6.071952 TGTCTTTCTAGGCATTTCAAATGGAC 60.072 38.462 12.14 8.23 29.10 4.02
1550 1643 6.151817 GTCTTTCTAGGCATTTCAAATGGACT 59.848 38.462 12.14 3.08 0.00 3.85
1551 1644 6.375455 TCTTTCTAGGCATTTCAAATGGACTC 59.625 38.462 12.14 0.00 0.00 3.36
1552 1645 5.178096 TCTAGGCATTTCAAATGGACTCA 57.822 39.130 12.14 0.00 0.00 3.41
1553 1646 5.569355 TCTAGGCATTTCAAATGGACTCAA 58.431 37.500 12.14 0.00 0.00 3.02
1554 1647 4.525912 AGGCATTTCAAATGGACTCAAC 57.474 40.909 12.14 0.00 0.00 3.18
1555 1648 3.896888 AGGCATTTCAAATGGACTCAACA 59.103 39.130 12.14 0.00 0.00 3.33
1556 1649 4.529377 AGGCATTTCAAATGGACTCAACAT 59.471 37.500 12.14 0.00 0.00 2.71
1557 1650 5.716228 AGGCATTTCAAATGGACTCAACATA 59.284 36.000 12.14 0.00 0.00 2.29
1558 1651 5.807011 GGCATTTCAAATGGACTCAACATAC 59.193 40.000 12.14 0.00 0.00 2.39
1559 1652 5.512788 GCATTTCAAATGGACTCAACATACG 59.487 40.000 12.14 0.00 0.00 3.06
1560 1653 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
1561 1654 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
1562 1655 5.097742 TCAAATGGACTCAACATACGGAT 57.902 39.130 0.00 0.00 0.00 4.18
1563 1656 4.875536 TCAAATGGACTCAACATACGGATG 59.124 41.667 5.94 5.94 39.16 3.51
1565 1658 5.607939 AATGGACTCAACATACGGATGTA 57.392 39.130 15.10 0.00 45.93 2.29
1566 1659 5.808366 ATGGACTCAACATACGGATGTAT 57.192 39.130 15.10 0.00 45.93 2.29
1603 1696 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
1604 1697 5.536554 AGTGTAGATTCACTCATTTTGCG 57.463 39.130 0.00 0.00 44.07 4.85
1605 1698 4.091424 GTGTAGATTCACTCATTTTGCGC 58.909 43.478 0.00 0.00 35.68 6.09
1606 1699 2.927553 AGATTCACTCATTTTGCGCC 57.072 45.000 4.18 0.00 0.00 6.53
1607 1700 1.131126 AGATTCACTCATTTTGCGCCG 59.869 47.619 4.18 0.00 0.00 6.46
1608 1701 0.456653 ATTCACTCATTTTGCGCCGC 60.457 50.000 4.18 0.00 0.00 6.53
1609 1702 1.790090 TTCACTCATTTTGCGCCGCA 61.790 50.000 8.16 8.16 36.47 5.69
1610 1703 1.153978 CACTCATTTTGCGCCGCAT 60.154 52.632 14.63 0.00 38.76 4.73
1611 1704 1.153978 ACTCATTTTGCGCCGCATG 60.154 52.632 14.63 9.00 38.76 4.06
1612 1705 1.153978 CTCATTTTGCGCCGCATGT 60.154 52.632 14.63 0.00 38.76 3.21
1613 1706 0.098552 CTCATTTTGCGCCGCATGTA 59.901 50.000 14.63 1.01 38.76 2.29
1614 1707 0.098552 TCATTTTGCGCCGCATGTAG 59.901 50.000 14.63 4.03 38.76 2.74
1615 1708 0.179166 CATTTTGCGCCGCATGTAGT 60.179 50.000 14.63 0.00 38.76 2.73
1616 1709 0.098728 ATTTTGCGCCGCATGTAGTC 59.901 50.000 14.63 0.00 38.76 2.59
1617 1710 1.231296 TTTTGCGCCGCATGTAGTCA 61.231 50.000 14.63 0.00 38.76 3.41
1618 1711 1.906994 TTTGCGCCGCATGTAGTCAC 61.907 55.000 14.63 0.00 38.76 3.67
1619 1712 2.509336 GCGCCGCATGTAGTCACT 60.509 61.111 3.15 0.00 0.00 3.41
1620 1713 2.100631 GCGCCGCATGTAGTCACTT 61.101 57.895 3.15 0.00 0.00 3.16
1621 1714 1.709760 CGCCGCATGTAGTCACTTG 59.290 57.895 0.00 0.00 33.92 3.16
1622 1715 1.014044 CGCCGCATGTAGTCACTTGT 61.014 55.000 0.00 0.00 33.46 3.16
1623 1716 1.156736 GCCGCATGTAGTCACTTGTT 58.843 50.000 0.00 0.00 33.46 2.83
1624 1717 1.135972 GCCGCATGTAGTCACTTGTTG 60.136 52.381 0.00 0.00 33.46 3.33
1625 1718 2.412870 CCGCATGTAGTCACTTGTTGA 58.587 47.619 0.00 0.00 33.46 3.18
1626 1719 2.805671 CCGCATGTAGTCACTTGTTGAA 59.194 45.455 0.00 0.00 35.39 2.69
1627 1720 3.249799 CCGCATGTAGTCACTTGTTGAAA 59.750 43.478 0.00 0.00 35.39 2.69
1628 1721 4.083324 CCGCATGTAGTCACTTGTTGAAAT 60.083 41.667 0.00 0.00 35.39 2.17
1629 1722 5.082059 CGCATGTAGTCACTTGTTGAAATC 58.918 41.667 0.00 0.00 35.39 2.17
1630 1723 5.106948 CGCATGTAGTCACTTGTTGAAATCT 60.107 40.000 0.00 0.00 35.39 2.40
1631 1724 6.310197 GCATGTAGTCACTTGTTGAAATCTC 58.690 40.000 0.00 0.00 35.39 2.75
1632 1725 6.148480 GCATGTAGTCACTTGTTGAAATCTCT 59.852 38.462 0.00 0.00 35.39 3.10
1633 1726 7.331934 GCATGTAGTCACTTGTTGAAATCTCTA 59.668 37.037 0.00 0.00 35.39 2.43
1634 1727 8.867935 CATGTAGTCACTTGTTGAAATCTCTAG 58.132 37.037 0.00 0.00 35.39 2.43
1635 1728 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
1636 1729 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
1637 1730 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
1638 1731 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
1639 1732 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
1640 1733 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
1641 1734 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
1642 1735 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
1643 1736 9.050601 ACTTGTTGAAATCTCTAGAAAGACAAG 57.949 33.333 17.75 17.75 33.18 3.16
1644 1737 8.964476 TTGTTGAAATCTCTAGAAAGACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
1659 1752 8.097662 AGAAAGACAAGTATTTAGGAACAGAGG 58.902 37.037 0.00 0.00 0.00 3.69
1660 1753 6.301169 AGACAAGTATTTAGGAACAGAGGG 57.699 41.667 0.00 0.00 0.00 4.30
1661 1754 6.023603 AGACAAGTATTTAGGAACAGAGGGA 58.976 40.000 0.00 0.00 0.00 4.20
1662 1755 6.155393 AGACAAGTATTTAGGAACAGAGGGAG 59.845 42.308 0.00 0.00 0.00 4.30
1663 1756 5.785940 ACAAGTATTTAGGAACAGAGGGAGT 59.214 40.000 0.00 0.00 0.00 3.85
1664 1757 6.958192 ACAAGTATTTAGGAACAGAGGGAGTA 59.042 38.462 0.00 0.00 0.00 2.59
1665 1758 7.624077 ACAAGTATTTAGGAACAGAGGGAGTAT 59.376 37.037 0.00 0.00 0.00 2.12
1666 1759 9.144298 CAAGTATTTAGGAACAGAGGGAGTATA 57.856 37.037 0.00 0.00 0.00 1.47
1667 1760 9.725206 AAGTATTTAGGAACAGAGGGAGTATAA 57.275 33.333 0.00 0.00 0.00 0.98
1668 1761 9.145442 AGTATTTAGGAACAGAGGGAGTATAAC 57.855 37.037 0.00 0.00 0.00 1.89
1669 1762 9.145442 GTATTTAGGAACAGAGGGAGTATAACT 57.855 37.037 0.00 0.00 0.00 2.24
1670 1763 7.657023 TTTAGGAACAGAGGGAGTATAACTC 57.343 40.000 0.00 0.00 44.32 3.01
1671 1764 5.475398 AGGAACAGAGGGAGTATAACTCT 57.525 43.478 6.99 0.00 44.46 3.24
1672 1765 5.844601 AGGAACAGAGGGAGTATAACTCTT 58.155 41.667 6.99 0.00 44.46 2.85
1673 1766 5.659079 AGGAACAGAGGGAGTATAACTCTTG 59.341 44.000 6.99 4.24 44.46 3.02
1674 1767 5.346181 AACAGAGGGAGTATAACTCTTGC 57.654 43.478 6.99 0.00 44.46 4.01
1675 1768 4.353777 ACAGAGGGAGTATAACTCTTGCA 58.646 43.478 6.99 0.00 44.46 4.08
1739 1832 5.350640 GGTATTATGGTATGCTTAAGCGTCC 59.649 44.000 25.08 23.00 45.83 4.79
1888 1981 2.222227 AGGAGACATTTTCTTGGCCC 57.778 50.000 0.00 0.00 33.22 5.80
1929 2026 7.812648 TGTAATTTAGTCACTTATGTGGTTGC 58.187 34.615 8.74 0.00 43.94 4.17
2015 2112 6.973642 TCCCTCTGATCCAAATTAATTGACT 58.026 36.000 0.39 0.00 41.85 3.41
2036 2133 7.494211 TGACTCTGCTTTAGTACAACTTTGTA 58.506 34.615 0.00 0.00 42.35 2.41
2105 2202 8.268850 TCTTCTCTGCAAATATTCTTTGTACC 57.731 34.615 0.00 0.00 0.00 3.34
2108 2205 6.653320 TCTCTGCAAATATTCTTTGTACCGTT 59.347 34.615 0.00 0.00 0.00 4.44
2109 2206 6.607689 TCTGCAAATATTCTTTGTACCGTTG 58.392 36.000 0.00 0.00 0.00 4.10
2110 2207 6.205853 TCTGCAAATATTCTTTGTACCGTTGT 59.794 34.615 0.00 0.00 0.00 3.32
2111 2208 7.388224 TCTGCAAATATTCTTTGTACCGTTGTA 59.612 33.333 0.00 0.00 0.00 2.41
2112 2209 7.299586 TGCAAATATTCTTTGTACCGTTGTAC 58.700 34.615 0.00 0.00 46.22 2.90
2113 2210 6.744082 GCAAATATTCTTTGTACCGTTGTACC 59.256 38.462 0.81 0.00 45.59 3.34
2153 2253 3.070018 ACTGTTAGACTTGTGCAGATGC 58.930 45.455 0.00 0.00 42.50 3.91
2207 2307 7.866393 AGAATTTTGAGAAGAATGTTTGCTCTG 59.134 33.333 0.00 0.00 0.00 3.35
2263 2363 6.542370 AGTGAATACAGTGCAGTGTACTTTTT 59.458 34.615 31.52 22.78 35.74 1.94
2267 2367 5.235305 ACAGTGCAGTGTACTTTTTCTTG 57.765 39.130 25.58 2.23 0.00 3.02
2268 2368 4.096382 ACAGTGCAGTGTACTTTTTCTTGG 59.904 41.667 25.58 0.56 0.00 3.61
2331 2431 1.872952 CAGGCAATCAACACGAACTCA 59.127 47.619 0.00 0.00 0.00 3.41
2374 2474 0.174162 GGGCAATGCATTTCTTCGCT 59.826 50.000 9.83 0.00 0.00 4.93
2473 2573 5.474532 TGAGAAGTTGCTTGATTGTGCTAAT 59.525 36.000 0.00 0.00 0.00 1.73
2575 2675 2.397597 AGGTTGCCCAAAAGTCACATT 58.602 42.857 0.00 0.00 0.00 2.71
2585 2685 5.512921 CCCAAAAGTCACATTATTTGGCCTT 60.513 40.000 3.32 0.00 46.64 4.35
2588 2688 6.909550 AAAGTCACATTATTTGGCCTTGTA 57.090 33.333 3.32 0.00 0.00 2.41
2650 2750 4.514781 TCACTCTAGAAGCGCTTGTTTA 57.485 40.909 30.47 15.48 0.00 2.01
2651 2751 4.878439 TCACTCTAGAAGCGCTTGTTTAA 58.122 39.130 30.47 7.83 0.00 1.52
2652 2752 5.294356 TCACTCTAGAAGCGCTTGTTTAAA 58.706 37.500 30.47 7.41 0.00 1.52
2656 2756 7.591426 CACTCTAGAAGCGCTTGTTTAAAATTT 59.409 33.333 30.47 0.00 0.00 1.82
2684 2784 3.481453 TCACAATGAATCGGTGGACAAA 58.519 40.909 0.00 0.00 33.45 2.83
2733 2833 8.940768 TGCTTTTACTTTTGATAACTTTTGCT 57.059 26.923 0.00 0.00 0.00 3.91
2734 2834 8.816144 TGCTTTTACTTTTGATAACTTTTGCTG 58.184 29.630 0.00 0.00 0.00 4.41
2735 2835 7.793888 GCTTTTACTTTTGATAACTTTTGCTGC 59.206 33.333 0.00 0.00 0.00 5.25
2737 2837 8.574196 TTTACTTTTGATAACTTTTGCTGCTC 57.426 30.769 0.00 0.00 0.00 4.26
2738 2838 6.147864 ACTTTTGATAACTTTTGCTGCTCA 57.852 33.333 0.00 0.00 0.00 4.26
2739 2839 6.572519 ACTTTTGATAACTTTTGCTGCTCAA 58.427 32.000 0.00 0.00 0.00 3.02
2740 2840 7.212274 ACTTTTGATAACTTTTGCTGCTCAAT 58.788 30.769 0.00 0.00 34.12 2.57
2742 2842 5.963176 TGATAACTTTTGCTGCTCAATGA 57.037 34.783 0.00 0.00 34.12 2.57
2744 2844 6.927416 TGATAACTTTTGCTGCTCAATGAAT 58.073 32.000 0.00 0.00 34.12 2.57
3010 3177 9.778741 AACTGACAAGTTCTTTCTGAATATGTA 57.221 29.630 0.00 0.00 43.34 2.29
3110 3277 1.406180 GTTTGCGGTACCACCAAGTTT 59.594 47.619 13.54 0.00 38.47 2.66
3152 3319 3.132289 CACTGGACACGGTAACTATCCAT 59.868 47.826 0.00 0.00 38.40 3.41
3210 3377 2.437085 ACCTAACCTGGCCAAATAGC 57.563 50.000 7.01 0.00 0.00 2.97
3217 3384 1.396653 CTGGCCAAATAGCTCAAGGG 58.603 55.000 7.01 0.00 0.00 3.95
3219 3386 1.077005 TGGCCAAATAGCTCAAGGGTT 59.923 47.619 0.61 0.00 0.00 4.11
3349 3516 0.911769 TCGAGATTGTGATGGGCCTT 59.088 50.000 4.53 0.00 0.00 4.35
3385 3552 3.444805 AGCGTGGAGGAGACGAGC 61.445 66.667 0.00 0.00 39.21 5.03
3427 3594 0.679002 AAGATGCTGCCACGCTCATT 60.679 50.000 0.00 0.00 0.00 2.57
3514 3681 4.691326 AGCTAGTATTCTTACCTTGGGC 57.309 45.455 0.00 0.00 0.00 5.36
3570 3737 2.176798 TGGTGGGTTGGTGATTTTCTCT 59.823 45.455 0.00 0.00 0.00 3.10
3578 3745 5.946377 GGTTGGTGATTTTCTCTGGACTATT 59.054 40.000 0.00 0.00 0.00 1.73
3634 3801 8.936864 GTTAAGTATGTAAGCTGTTGAACATCT 58.063 33.333 0.00 0.00 34.54 2.90
3641 3808 2.738846 AGCTGTTGAACATCTAAGTGCG 59.261 45.455 0.00 0.00 0.00 5.34
3669 3836 3.673484 GCGGCTGTGGTGCATGTT 61.673 61.111 0.00 0.00 34.04 2.71
3696 3863 6.757237 TGTATGCATCTTTTTGTGTCCAAAT 58.243 32.000 0.19 0.00 40.14 2.32
3718 3885 3.139077 GGAAGAATATGCGGGTACAAGG 58.861 50.000 0.00 0.00 0.00 3.61
3760 3927 3.740832 TGTGAATCTGTGATGTGTCGTTC 59.259 43.478 0.00 0.00 0.00 3.95
3762 3929 3.989817 TGAATCTGTGATGTGTCGTTCTG 59.010 43.478 0.00 0.00 0.00 3.02
3763 3930 3.942130 ATCTGTGATGTGTCGTTCTGA 57.058 42.857 0.00 0.00 0.00 3.27
3804 4613 0.747852 GTTCTCTTAGGGCTCGAGGG 59.252 60.000 15.58 0.00 0.00 4.30
3807 4616 1.305802 TCTTAGGGCTCGAGGGCAA 60.306 57.895 15.58 0.00 42.84 4.52
3815 4628 1.680249 GGCTCGAGGGCAAGAGATTTT 60.680 52.381 15.58 0.00 40.53 1.82
3817 4630 2.096657 GCTCGAGGGCAAGAGATTTTTC 59.903 50.000 15.58 0.00 36.65 2.29
3828 4641 7.331934 GGGCAAGAGATTTTTCTTTTACCAATC 59.668 37.037 0.00 0.00 35.28 2.67
3841 4654 8.792830 TCTTTTACCAATCTGTGAAGATTAGG 57.207 34.615 0.85 7.65 36.82 2.69
3859 4672 3.713826 AGGGTGTATTTGTTCGATGGT 57.286 42.857 0.00 0.00 0.00 3.55
3862 4675 5.562635 AGGGTGTATTTGTTCGATGGTTAA 58.437 37.500 0.00 0.00 0.00 2.01
3877 4690 5.051307 CGATGGTTAATGCAGCAATTGATTG 60.051 40.000 10.34 7.79 40.66 2.67
3913 4726 5.163652 TGAGTAGATGTCAGTGATACCAACG 60.164 44.000 0.00 0.00 0.00 4.10
3928 4741 7.062371 GTGATACCAACGCTAGATGATATCAAC 59.938 40.741 9.99 7.23 31.52 3.18
3938 4751 8.066595 CGCTAGATGATATCAACTTTGAAAAGG 58.933 37.037 19.27 2.82 41.13 3.11
4077 4891 8.785329 TTTGCCACAAAAGTTATTTCTTTCTT 57.215 26.923 0.00 0.00 36.75 2.52
4111 4925 3.245990 GTGTTGCTGAAGAAATTGCCAAC 59.754 43.478 0.00 0.00 0.00 3.77
4116 4932 3.557686 GCTGAAGAAATTGCCAACCCAAT 60.558 43.478 0.00 0.00 37.03 3.16
4117 4933 4.322650 GCTGAAGAAATTGCCAACCCAATA 60.323 41.667 0.00 0.00 34.50 1.90
4123 4939 4.972751 AATTGCCAACCCAATACAACTT 57.027 36.364 0.00 0.00 34.50 2.66
4166 4982 1.632589 AATTGCCAACCTCTCCCAAC 58.367 50.000 0.00 0.00 0.00 3.77
4190 5006 0.874175 TTGGTCGGCTATTGCGATCG 60.874 55.000 11.69 11.69 40.82 3.69
4238 5054 8.918202 TTATTACATCCAAACTATTAGCCCTG 57.082 34.615 0.00 0.00 0.00 4.45
4239 5055 4.862641 ACATCCAAACTATTAGCCCTGT 57.137 40.909 0.00 0.00 0.00 4.00
4240 5056 4.526970 ACATCCAAACTATTAGCCCTGTG 58.473 43.478 0.00 0.00 0.00 3.66
4241 5057 2.999331 TCCAAACTATTAGCCCTGTGC 58.001 47.619 0.00 0.00 41.71 4.57
4250 5066 3.284449 GCCCTGTGCGTTCGGTTT 61.284 61.111 0.00 0.00 0.00 3.27
4251 5067 1.962306 GCCCTGTGCGTTCGGTTTA 60.962 57.895 0.00 0.00 0.00 2.01
4252 5068 1.303091 GCCCTGTGCGTTCGGTTTAT 61.303 55.000 0.00 0.00 0.00 1.40
4253 5069 1.161843 CCCTGTGCGTTCGGTTTATT 58.838 50.000 0.00 0.00 0.00 1.40
4254 5070 1.129811 CCCTGTGCGTTCGGTTTATTC 59.870 52.381 0.00 0.00 0.00 1.75
4255 5071 1.201877 CCTGTGCGTTCGGTTTATTCG 60.202 52.381 0.00 0.00 0.00 3.34
4256 5072 0.791422 TGTGCGTTCGGTTTATTCGG 59.209 50.000 0.00 0.00 0.00 4.30
4257 5073 0.792031 GTGCGTTCGGTTTATTCGGT 59.208 50.000 0.00 0.00 0.00 4.69
4258 5074 1.195222 GTGCGTTCGGTTTATTCGGTT 59.805 47.619 0.00 0.00 0.00 4.44
4259 5075 1.872313 TGCGTTCGGTTTATTCGGTTT 59.128 42.857 0.00 0.00 0.00 3.27
4260 5076 3.062763 TGCGTTCGGTTTATTCGGTTTA 58.937 40.909 0.00 0.00 0.00 2.01
4261 5077 3.120718 TGCGTTCGGTTTATTCGGTTTAC 60.121 43.478 0.00 0.00 0.00 2.01
4262 5078 3.120718 GCGTTCGGTTTATTCGGTTTACA 60.121 43.478 0.00 0.00 0.00 2.41
4263 5079 4.435917 GCGTTCGGTTTATTCGGTTTACAT 60.436 41.667 0.00 0.00 0.00 2.29
4264 5080 5.016985 CGTTCGGTTTATTCGGTTTACATG 58.983 41.667 0.00 0.00 0.00 3.21
4265 5081 5.326292 GTTCGGTTTATTCGGTTTACATGG 58.674 41.667 0.00 0.00 0.00 3.66
4266 5082 4.577875 TCGGTTTATTCGGTTTACATGGT 58.422 39.130 0.00 0.00 0.00 3.55
4267 5083 5.002516 TCGGTTTATTCGGTTTACATGGTT 58.997 37.500 0.00 0.00 0.00 3.67
4268 5084 5.122082 TCGGTTTATTCGGTTTACATGGTTC 59.878 40.000 0.00 0.00 0.00 3.62
4269 5085 5.326292 GGTTTATTCGGTTTACATGGTTCG 58.674 41.667 0.00 0.00 0.00 3.95
4270 5086 5.326292 GTTTATTCGGTTTACATGGTTCGG 58.674 41.667 0.00 0.00 0.00 4.30
4271 5087 2.547299 TTCGGTTTACATGGTTCGGT 57.453 45.000 0.00 0.00 0.00 4.69
4272 5088 2.547299 TCGGTTTACATGGTTCGGTT 57.453 45.000 0.00 0.00 0.00 4.44
4273 5089 2.848691 TCGGTTTACATGGTTCGGTTT 58.151 42.857 0.00 0.00 0.00 3.27
4274 5090 4.000331 TCGGTTTACATGGTTCGGTTTA 58.000 40.909 0.00 0.00 0.00 2.01
4275 5091 4.577875 TCGGTTTACATGGTTCGGTTTAT 58.422 39.130 0.00 0.00 0.00 1.40
4276 5092 5.728471 TCGGTTTACATGGTTCGGTTTATA 58.272 37.500 0.00 0.00 0.00 0.98
4277 5093 5.580297 TCGGTTTACATGGTTCGGTTTATAC 59.420 40.000 0.00 0.00 0.00 1.47
4278 5094 5.500610 CGGTTTACATGGTTCGGTTTATACG 60.501 44.000 0.00 0.00 0.00 3.06
4279 5095 5.220643 GGTTTACATGGTTCGGTTTATACGG 60.221 44.000 0.00 0.00 0.00 4.02
4280 5096 3.615224 ACATGGTTCGGTTTATACGGT 57.385 42.857 0.00 0.00 0.00 4.83
4281 5097 3.941573 ACATGGTTCGGTTTATACGGTT 58.058 40.909 0.00 0.00 0.00 4.44
4282 5098 4.325972 ACATGGTTCGGTTTATACGGTTT 58.674 39.130 0.00 0.00 0.00 3.27
4283 5099 4.761227 ACATGGTTCGGTTTATACGGTTTT 59.239 37.500 0.00 0.00 0.00 2.43
4284 5100 5.241285 ACATGGTTCGGTTTATACGGTTTTT 59.759 36.000 0.00 0.00 0.00 1.94
4285 5101 5.355467 TGGTTCGGTTTATACGGTTTTTC 57.645 39.130 0.00 0.00 0.00 2.29
4286 5102 4.084118 TGGTTCGGTTTATACGGTTTTTCG 60.084 41.667 0.00 0.00 0.00 3.46
4287 5103 4.393934 GTTCGGTTTATACGGTTTTTCGG 58.606 43.478 0.00 0.00 0.00 4.30
4288 5104 3.658709 TCGGTTTATACGGTTTTTCGGT 58.341 40.909 0.00 0.00 0.00 4.69
4289 5105 4.810790 TCGGTTTATACGGTTTTTCGGTA 58.189 39.130 0.00 0.00 36.54 4.02
4290 5106 5.415221 TCGGTTTATACGGTTTTTCGGTAT 58.585 37.500 0.00 0.00 42.45 2.73
4291 5107 5.290643 TCGGTTTATACGGTTTTTCGGTATG 59.709 40.000 7.84 0.00 40.85 2.39
4292 5108 5.063312 CGGTTTATACGGTTTTTCGGTATGT 59.937 40.000 7.84 0.00 40.85 2.29
4293 5109 6.254589 CGGTTTATACGGTTTTTCGGTATGTA 59.745 38.462 7.84 0.00 40.85 2.29
4294 5110 7.398746 GGTTTATACGGTTTTTCGGTATGTAC 58.601 38.462 7.84 0.00 40.85 2.90
4295 5111 6.804534 TTATACGGTTTTTCGGTATGTACG 57.195 37.500 7.84 0.00 40.85 3.67
4296 5112 2.336667 ACGGTTTTTCGGTATGTACGG 58.663 47.619 0.00 0.00 0.00 4.02
4297 5113 2.288763 ACGGTTTTTCGGTATGTACGGT 60.289 45.455 0.00 0.00 0.00 4.83
4298 5114 3.057174 ACGGTTTTTCGGTATGTACGGTA 60.057 43.478 0.00 0.00 0.00 4.02
4299 5115 4.111916 CGGTTTTTCGGTATGTACGGTAT 58.888 43.478 0.00 0.00 0.00 2.73
4300 5116 4.566360 CGGTTTTTCGGTATGTACGGTATT 59.434 41.667 0.00 0.00 0.00 1.89
4301 5117 5.746245 CGGTTTTTCGGTATGTACGGTATTA 59.254 40.000 0.00 0.00 0.00 0.98
4302 5118 6.254589 CGGTTTTTCGGTATGTACGGTATTAA 59.745 38.462 0.00 0.00 0.00 1.40
4303 5119 7.042791 CGGTTTTTCGGTATGTACGGTATTAAT 60.043 37.037 0.00 0.00 0.00 1.40
4304 5120 9.255304 GGTTTTTCGGTATGTACGGTATTAATA 57.745 33.333 0.00 0.00 0.00 0.98
4308 5124 9.677567 TTTCGGTATGTACGGTATTAATACTTC 57.322 33.333 21.86 8.30 33.81 3.01
4309 5125 7.518161 TCGGTATGTACGGTATTAATACTTCG 58.482 38.462 21.86 19.44 33.81 3.79
4310 5126 6.742718 CGGTATGTACGGTATTAATACTTCGG 59.257 42.308 21.86 12.82 33.81 4.30
4311 5127 7.573096 CGGTATGTACGGTATTAATACTTCGGT 60.573 40.741 21.86 16.68 33.81 4.69
4312 5128 8.726988 GGTATGTACGGTATTAATACTTCGGTA 58.273 37.037 21.86 15.91 33.81 4.02
4318 5134 8.728088 ACGGTATTAATACTTCGGTAAATACG 57.272 34.615 21.86 15.00 36.24 3.06
4319 5135 7.807907 ACGGTATTAATACTTCGGTAAATACGG 59.192 37.037 21.86 0.00 38.55 4.02
4320 5136 7.807907 CGGTATTAATACTTCGGTAAATACGGT 59.192 37.037 21.86 0.00 36.24 4.83
4327 5143 9.768662 AATACTTCGGTAAATACGGTATGAAAT 57.231 29.630 0.58 0.00 33.79 2.17
4328 5144 9.768662 ATACTTCGGTAAATACGGTATGAAATT 57.231 29.630 0.58 0.00 33.79 1.82
4330 5146 9.598517 ACTTCGGTAAATACGGTATGAAATTAA 57.401 29.630 0.58 0.00 0.00 1.40
4341 5157 7.401080 ACGGTATGAAATTAAAATACGGTTCG 58.599 34.615 10.17 0.00 37.15 3.95
4342 5158 6.847289 CGGTATGAAATTAAAATACGGTTCGG 59.153 38.462 0.00 0.00 0.00 4.30
4343 5159 7.465781 CGGTATGAAATTAAAATACGGTTCGGT 60.466 37.037 0.00 0.00 0.00 4.69
4344 5160 8.183536 GGTATGAAATTAAAATACGGTTCGGTT 58.816 33.333 0.00 0.00 0.00 4.44
4345 5161 9.558648 GTATGAAATTAAAATACGGTTCGGTTT 57.441 29.630 0.00 0.00 0.00 3.27
4346 5162 8.677871 ATGAAATTAAAATACGGTTCGGTTTC 57.322 30.769 0.00 0.00 0.00 2.78
4347 5163 6.796072 TGAAATTAAAATACGGTTCGGTTTCG 59.204 34.615 0.00 0.00 37.82 3.46
4348 5164 4.660352 TTAAAATACGGTTCGGTTTCGG 57.340 40.909 0.00 0.00 36.95 4.30
4349 5165 2.168326 AAATACGGTTCGGTTTCGGT 57.832 45.000 0.00 0.00 36.95 4.69
4350 5166 3.311486 AAATACGGTTCGGTTTCGGTA 57.689 42.857 0.00 0.00 36.95 4.02
4351 5167 3.525268 AATACGGTTCGGTTTCGGTAT 57.475 42.857 0.00 0.00 36.95 2.73
4352 5168 4.647424 AATACGGTTCGGTTTCGGTATA 57.353 40.909 0.00 0.00 36.95 1.47
4353 5169 4.853924 ATACGGTTCGGTTTCGGTATAT 57.146 40.909 0.00 0.00 36.95 0.86
4354 5170 5.957842 ATACGGTTCGGTTTCGGTATATA 57.042 39.130 0.00 0.00 36.95 0.86
4355 5171 3.964909 ACGGTTCGGTTTCGGTATATAC 58.035 45.455 4.14 4.14 36.95 1.47
4356 5172 3.243401 ACGGTTCGGTTTCGGTATATACC 60.243 47.826 20.39 20.39 42.98 2.73
4357 5173 3.243367 CGGTTCGGTTTCGGTATATACCA 60.243 47.826 27.58 14.40 46.80 3.25
4358 5174 4.692228 GGTTCGGTTTCGGTATATACCAA 58.308 43.478 27.58 18.57 46.80 3.67
4359 5175 5.115480 GGTTCGGTTTCGGTATATACCAAA 58.885 41.667 27.58 22.18 46.80 3.28
4360 5176 5.759763 GGTTCGGTTTCGGTATATACCAAAT 59.240 40.000 27.58 0.00 46.80 2.32
4361 5177 6.260714 GGTTCGGTTTCGGTATATACCAAATT 59.739 38.462 27.58 0.00 46.80 1.82
4362 5178 7.440856 GGTTCGGTTTCGGTATATACCAAATTA 59.559 37.037 27.58 14.29 46.80 1.40
4363 5179 8.992073 GTTCGGTTTCGGTATATACCAAATTAT 58.008 33.333 27.58 0.00 46.80 1.28
4364 5180 9.558396 TTCGGTTTCGGTATATACCAAATTATT 57.442 29.630 27.58 0.00 46.80 1.40
4365 5181 9.558396 TCGGTTTCGGTATATACCAAATTATTT 57.442 29.630 27.58 0.00 46.80 1.40
4366 5182 9.815936 CGGTTTCGGTATATACCAAATTATTTC 57.184 33.333 27.58 14.34 46.80 2.17
4367 5183 9.815936 GGTTTCGGTATATACCAAATTATTTCG 57.184 33.333 27.58 12.15 46.80 3.46
4368 5184 9.815936 GTTTCGGTATATACCAAATTATTTCGG 57.184 33.333 27.58 9.93 46.80 4.30
4369 5185 9.558396 TTTCGGTATATACCAAATTATTTCGGT 57.442 29.630 27.58 13.35 46.80 4.69
4378 5194 6.557110 ACCAAATTATTTCGGTATGGTTTCG 58.443 36.000 9.07 0.00 36.32 3.46
4379 5195 5.974751 CCAAATTATTTCGGTATGGTTTCGG 59.025 40.000 0.00 0.00 0.00 4.30
4380 5196 6.404954 CCAAATTATTTCGGTATGGTTTCGGT 60.405 38.462 0.00 0.00 0.00 4.69
4381 5197 7.201714 CCAAATTATTTCGGTATGGTTTCGGTA 60.202 37.037 0.00 0.00 0.00 4.02
4382 5198 8.347035 CAAATTATTTCGGTATGGTTTCGGTAT 58.653 33.333 0.00 0.00 0.00 2.73
4383 5199 9.558396 AAATTATTTCGGTATGGTTTCGGTATA 57.442 29.630 0.00 0.00 0.00 1.47
4384 5200 9.729281 AATTATTTCGGTATGGTTTCGGTATAT 57.271 29.630 0.00 0.00 0.00 0.86
4386 5202 9.638239 TTATTTCGGTATGGTTTCGGTATATAC 57.362 33.333 4.14 4.14 0.00 1.47
4387 5203 5.643379 TCGGTATGGTTTCGGTATATACC 57.357 43.478 20.39 20.39 42.98 2.73
4388 5204 5.076182 TCGGTATGGTTTCGGTATATACCA 58.924 41.667 27.58 13.16 46.80 3.25
4390 5206 6.889177 TCGGTATGGTTTCGGTATATACCATA 59.111 38.462 27.58 17.66 46.65 2.74
4396 5212 8.449251 TGGTTTCGGTATATACCATAAAAACC 57.551 34.615 32.31 32.31 46.80 3.27
4397 5213 8.449251 GGTTTCGGTATATACCATAAAAACCA 57.551 34.615 33.00 15.64 46.80 3.67
4398 5214 8.901793 GGTTTCGGTATATACCATAAAAACCAA 58.098 33.333 33.00 15.19 46.80 3.67
4401 5217 9.683870 TTCGGTATATACCATAAAAACCAAAGT 57.316 29.630 27.58 0.00 46.80 2.66
4402 5218 9.683870 TCGGTATATACCATAAAAACCAAAGTT 57.316 29.630 27.58 0.00 46.80 2.66
4403 5219 9.724839 CGGTATATACCATAAAAACCAAAGTTG 57.275 33.333 27.58 5.19 46.80 3.16
4407 5223 4.364860 ACCATAAAAACCAAAGTTGACGC 58.635 39.130 0.00 0.00 35.97 5.19
4408 5224 3.423867 CCATAAAAACCAAAGTTGACGCG 59.576 43.478 3.53 3.53 35.97 6.01
4409 5225 2.923605 AAAAACCAAAGTTGACGCGA 57.076 40.000 15.93 0.00 35.97 5.87
4410 5226 2.923605 AAAACCAAAGTTGACGCGAA 57.076 40.000 15.93 0.00 35.97 4.70
4411 5227 3.430333 AAAACCAAAGTTGACGCGAAT 57.570 38.095 15.93 0.00 35.97 3.34
4412 5228 3.430333 AAACCAAAGTTGACGCGAATT 57.570 38.095 15.93 0.00 35.97 2.17
4413 5229 3.430333 AACCAAAGTTGACGCGAATTT 57.570 38.095 15.93 0.00 33.97 1.82
4414 5230 2.726633 ACCAAAGTTGACGCGAATTTG 58.273 42.857 15.93 12.71 0.00 2.32
4415 5231 2.356382 ACCAAAGTTGACGCGAATTTGA 59.644 40.909 15.93 0.00 33.69 2.69
4416 5232 3.181495 ACCAAAGTTGACGCGAATTTGAA 60.181 39.130 15.93 0.00 33.69 2.69
4417 5233 3.794028 CCAAAGTTGACGCGAATTTGAAA 59.206 39.130 15.93 0.00 33.69 2.69
4418 5234 4.266502 CCAAAGTTGACGCGAATTTGAAAA 59.733 37.500 15.93 0.00 33.69 2.29
4419 5235 5.051106 CCAAAGTTGACGCGAATTTGAAAAT 60.051 36.000 15.93 0.00 33.69 1.82
4420 5236 5.559694 AAGTTGACGCGAATTTGAAAATG 57.440 34.783 15.93 0.00 0.00 2.32
4421 5237 4.854399 AGTTGACGCGAATTTGAAAATGA 58.146 34.783 15.93 0.00 0.00 2.57
4422 5238 4.675114 AGTTGACGCGAATTTGAAAATGAC 59.325 37.500 15.93 0.00 0.00 3.06
4423 5239 3.222361 TGACGCGAATTTGAAAATGACG 58.778 40.909 15.93 9.63 34.53 4.35
4424 5240 3.223157 GACGCGAATTTGAAAATGACGT 58.777 40.909 15.93 9.40 35.85 4.34
4425 5241 4.084485 TGACGCGAATTTGAAAATGACGTA 60.084 37.500 15.93 0.00 34.40 3.57
4426 5242 4.774586 ACGCGAATTTGAAAATGACGTAA 58.225 34.783 15.93 0.00 33.31 3.18
4427 5243 5.387279 ACGCGAATTTGAAAATGACGTAAT 58.613 33.333 15.93 0.00 33.31 1.89
4428 5244 6.535811 ACGCGAATTTGAAAATGACGTAATA 58.464 32.000 15.93 0.00 33.31 0.98
4429 5245 7.016466 ACGCGAATTTGAAAATGACGTAATAA 58.984 30.769 15.93 0.00 33.31 1.40
4430 5246 7.694784 ACGCGAATTTGAAAATGACGTAATAAT 59.305 29.630 15.93 0.00 33.31 1.28
4431 5247 9.149556 CGCGAATTTGAAAATGACGTAATAATA 57.850 29.630 0.00 0.00 34.20 0.98
4457 5273 9.934190 AATTTGCAAATTTATGACTCAAAACAC 57.066 25.926 27.73 0.00 35.16 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 9.651913 TCAAAACATTGCTTAGTTTTTCTTCTT 57.348 25.926 9.79 0.00 43.26 2.52
88 89 3.624777 TCCCAATCTCAAATGCTTCTCC 58.375 45.455 0.00 0.00 0.00 3.71
136 141 3.952323 GCTAAATAAAAGTCTCCACCCCC 59.048 47.826 0.00 0.00 0.00 5.40
229 234 1.068472 CGCTAGATGGTGTACGGATCC 60.068 57.143 0.00 0.00 0.00 3.36
233 238 0.736636 TGTCGCTAGATGGTGTACGG 59.263 55.000 0.00 0.00 0.00 4.02
238 243 3.503827 TGTAGTTGTCGCTAGATGGTG 57.496 47.619 0.00 0.00 0.00 4.17
261 266 0.969409 GCCTTCAGCTGGCTCCAATT 60.969 55.000 15.13 0.00 46.38 2.32
308 313 0.255033 ATAGTGTTTTCCCGGCTCCC 59.745 55.000 0.00 0.00 0.00 4.30
321 328 8.492415 TTCCCAACTATCTGCTATAATAGTGT 57.508 34.615 0.00 0.00 38.41 3.55
326 333 6.712547 GCAACTTCCCAACTATCTGCTATAAT 59.287 38.462 0.00 0.00 0.00 1.28
329 336 4.455606 GCAACTTCCCAACTATCTGCTAT 58.544 43.478 0.00 0.00 0.00 2.97
339 346 0.887387 TAGCACGGCAACTTCCCAAC 60.887 55.000 0.00 0.00 0.00 3.77
344 351 1.993369 GCCCATAGCACGGCAACTTC 61.993 60.000 0.00 0.00 45.01 3.01
359 366 2.568062 TGTGTTCGTCCTATAAAGCCCA 59.432 45.455 0.00 0.00 0.00 5.36
364 371 3.833650 TCTGGGTGTGTTCGTCCTATAAA 59.166 43.478 0.00 0.00 0.00 1.40
378 385 4.042809 TCTTCACCATAATGTTCTGGGTGT 59.957 41.667 8.76 0.00 46.96 4.16
383 390 7.388776 TGAGAAAGTCTTCACCATAATGTTCTG 59.611 37.037 0.00 0.00 33.64 3.02
512 520 0.526954 GTGACGTCTGTGTTGTCGGT 60.527 55.000 17.92 0.00 35.40 4.69
551 559 9.528018 TTAAAAACACATGAAAGCTTAAGAAGG 57.472 29.630 6.67 0.00 0.00 3.46
580 588 6.933514 AAAAGCCTGATTCCCATCTAAAAA 57.066 33.333 0.00 0.00 0.00 1.94
584 592 5.072741 GCATAAAAGCCTGATTCCCATCTA 58.927 41.667 0.00 0.00 0.00 1.98
585 593 3.893813 GCATAAAAGCCTGATTCCCATCT 59.106 43.478 0.00 0.00 0.00 2.90
586 594 3.893813 AGCATAAAAGCCTGATTCCCATC 59.106 43.478 0.00 0.00 34.23 3.51
587 595 3.919834 AGCATAAAAGCCTGATTCCCAT 58.080 40.909 0.00 0.00 34.23 4.00
590 598 3.739209 GCCAAGCATAAAAGCCTGATTCC 60.739 47.826 0.00 0.00 34.23 3.01
603 611 3.436704 GCTTGCGATTATAGCCAAGCATA 59.563 43.478 19.88 0.00 42.51 3.14
608 616 1.946768 GGTGCTTGCGATTATAGCCAA 59.053 47.619 0.00 0.00 34.03 4.52
609 617 1.134250 TGGTGCTTGCGATTATAGCCA 60.134 47.619 0.00 0.00 34.03 4.75
693 704 3.464111 TCCGACCTCGAGTTTTTCTTT 57.536 42.857 12.31 0.00 43.02 2.52
707 718 1.595093 CTGGCCCAAATGTTCCGACC 61.595 60.000 0.00 0.00 0.00 4.79
708 719 0.608035 TCTGGCCCAAATGTTCCGAC 60.608 55.000 0.00 0.00 0.00 4.79
749 765 6.387465 CCGAGTACTAATGACTTCAGTTGAA 58.613 40.000 0.00 0.00 0.00 2.69
755 776 2.429610 GGGCCGAGTACTAATGACTTCA 59.570 50.000 0.00 0.00 0.00 3.02
766 787 2.813908 CGCACTTGGGCCGAGTAC 60.814 66.667 25.94 19.47 0.00 2.73
908 933 4.741239 GGGGTGGAGCTGAGGGGA 62.741 72.222 0.00 0.00 0.00 4.81
1059 1088 3.195698 GAAGATGGGGCGTGCGTC 61.196 66.667 0.00 0.00 0.00 5.19
1060 1089 3.958147 CTGAAGATGGGGCGTGCGT 62.958 63.158 0.00 0.00 0.00 5.24
1071 1100 1.134280 CAAGGTGGCGGATCTGAAGAT 60.134 52.381 5.48 0.00 37.51 2.40
1121 1150 0.872388 ACGAAAGCTAAAACCCAGCG 59.128 50.000 0.00 0.00 43.97 5.18
1307 1391 3.681897 GCATCCTATCAATCAACCTAGCG 59.318 47.826 0.00 0.00 0.00 4.26
1326 1410 2.561419 AGTAGTAACACCGTGTCTGCAT 59.439 45.455 4.23 0.00 0.00 3.96
1385 1477 3.194116 CAGAGCCCCTTAACGTGTAGTAA 59.806 47.826 0.00 0.00 0.00 2.24
1410 1502 4.626042 CAGCGATCTAAGCCTCTTAACAT 58.374 43.478 0.00 0.00 34.64 2.71
1476 1569 2.423577 TCTTTTTCGGTTGGCTCTAGC 58.576 47.619 0.00 0.00 41.14 3.42
1500 1593 1.272807 TTTGGGAACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
1501 1594 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1506 1599 3.007635 GACAAGTATTTGGGAACGGAGG 58.992 50.000 2.81 0.00 38.66 4.30
1507 1600 3.939066 AGACAAGTATTTGGGAACGGAG 58.061 45.455 2.81 0.00 38.66 4.63
1508 1601 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
1509 1602 4.760204 AGAAAGACAAGTATTTGGGAACGG 59.240 41.667 2.81 0.00 38.66 4.44
1510 1603 5.941948 AGAAAGACAAGTATTTGGGAACG 57.058 39.130 2.81 0.00 38.66 3.95
1511 1604 6.127980 GCCTAGAAAGACAAGTATTTGGGAAC 60.128 42.308 2.81 0.00 38.66 3.62
1512 1605 5.944007 GCCTAGAAAGACAAGTATTTGGGAA 59.056 40.000 2.81 0.00 38.66 3.97
1513 1606 5.013704 TGCCTAGAAAGACAAGTATTTGGGA 59.986 40.000 2.81 0.00 38.66 4.37
1514 1607 5.253330 TGCCTAGAAAGACAAGTATTTGGG 58.747 41.667 2.81 0.00 38.66 4.12
1515 1608 7.396540 AATGCCTAGAAAGACAAGTATTTGG 57.603 36.000 2.81 0.00 38.66 3.28
1516 1609 8.514594 TGAAATGCCTAGAAAGACAAGTATTTG 58.485 33.333 0.00 0.00 40.24 2.32
1517 1610 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
1518 1611 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
1519 1612 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
1520 1613 8.514594 CATTTGAAATGCCTAGAAAGACAAGTA 58.485 33.333 4.82 0.00 0.00 2.24
1521 1614 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
1522 1615 6.810182 CCATTTGAAATGCCTAGAAAGACAAG 59.190 38.462 12.26 0.00 0.00 3.16
1523 1616 6.493115 TCCATTTGAAATGCCTAGAAAGACAA 59.507 34.615 12.26 0.00 0.00 3.18
1524 1617 6.009589 TCCATTTGAAATGCCTAGAAAGACA 58.990 36.000 12.26 0.00 0.00 3.41
1525 1618 6.151817 AGTCCATTTGAAATGCCTAGAAAGAC 59.848 38.462 12.26 10.86 0.00 3.01
1526 1619 6.248433 AGTCCATTTGAAATGCCTAGAAAGA 58.752 36.000 12.26 0.00 0.00 2.52
1527 1620 6.151648 TGAGTCCATTTGAAATGCCTAGAAAG 59.848 38.462 12.26 0.00 0.00 2.62
1528 1621 6.009589 TGAGTCCATTTGAAATGCCTAGAAA 58.990 36.000 12.26 0.00 0.00 2.52
1529 1622 5.569355 TGAGTCCATTTGAAATGCCTAGAA 58.431 37.500 12.26 0.00 0.00 2.10
1530 1623 5.178096 TGAGTCCATTTGAAATGCCTAGA 57.822 39.130 12.26 1.83 0.00 2.43
1531 1624 5.183713 TGTTGAGTCCATTTGAAATGCCTAG 59.816 40.000 12.26 0.00 0.00 3.02
1532 1625 5.076182 TGTTGAGTCCATTTGAAATGCCTA 58.924 37.500 12.26 0.00 0.00 3.93
1533 1626 3.896888 TGTTGAGTCCATTTGAAATGCCT 59.103 39.130 12.26 9.70 0.00 4.75
1534 1627 4.255833 TGTTGAGTCCATTTGAAATGCC 57.744 40.909 12.26 5.23 0.00 4.40
1535 1628 5.512788 CGTATGTTGAGTCCATTTGAAATGC 59.487 40.000 12.26 0.23 0.00 3.56
1536 1629 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
1537 1630 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
1538 1631 5.309638 TCCGTATGTTGAGTCCATTTGAAA 58.690 37.500 0.00 0.00 0.00 2.69
1539 1632 4.900684 TCCGTATGTTGAGTCCATTTGAA 58.099 39.130 0.00 0.00 0.00 2.69
1540 1633 4.545208 TCCGTATGTTGAGTCCATTTGA 57.455 40.909 0.00 0.00 0.00 2.69
1541 1634 4.635765 ACATCCGTATGTTGAGTCCATTTG 59.364 41.667 0.00 0.00 44.07 2.32
1542 1635 4.843728 ACATCCGTATGTTGAGTCCATTT 58.156 39.130 0.00 0.00 44.07 2.32
1543 1636 4.487714 ACATCCGTATGTTGAGTCCATT 57.512 40.909 0.00 0.00 44.07 3.16
1544 1637 5.541845 CATACATCCGTATGTTGAGTCCAT 58.458 41.667 0.00 0.00 46.70 3.41
1545 1638 4.944048 CATACATCCGTATGTTGAGTCCA 58.056 43.478 0.00 0.00 46.70 4.02
1583 1676 4.091424 GCGCAAAATGAGTGAATCTACAC 58.909 43.478 0.30 0.00 40.60 2.90
1584 1677 3.126858 GGCGCAAAATGAGTGAATCTACA 59.873 43.478 10.83 0.00 0.00 2.74
1585 1678 3.685058 GGCGCAAAATGAGTGAATCTAC 58.315 45.455 10.83 0.00 0.00 2.59
1586 1679 2.351418 CGGCGCAAAATGAGTGAATCTA 59.649 45.455 10.83 0.00 0.00 1.98
1587 1680 1.131126 CGGCGCAAAATGAGTGAATCT 59.869 47.619 10.83 0.00 0.00 2.40
1588 1681 1.538276 CGGCGCAAAATGAGTGAATC 58.462 50.000 10.83 0.00 0.00 2.52
1589 1682 0.456653 GCGGCGCAAAATGAGTGAAT 60.457 50.000 29.21 0.00 0.00 2.57
1590 1683 1.081509 GCGGCGCAAAATGAGTGAA 60.082 52.632 29.21 0.00 0.00 3.18
1591 1684 1.585267 ATGCGGCGCAAAATGAGTGA 61.585 50.000 39.46 11.65 43.62 3.41
1592 1685 1.153978 ATGCGGCGCAAAATGAGTG 60.154 52.632 39.46 0.00 43.62 3.51
1593 1686 1.153978 CATGCGGCGCAAAATGAGT 60.154 52.632 39.46 18.13 43.62 3.41
1594 1687 0.098552 TACATGCGGCGCAAAATGAG 59.901 50.000 39.46 23.91 43.62 2.90
1595 1688 0.098552 CTACATGCGGCGCAAAATGA 59.901 50.000 39.46 20.22 43.62 2.57
1596 1689 0.179166 ACTACATGCGGCGCAAAATG 60.179 50.000 39.46 32.29 43.62 2.32
1597 1690 0.098728 GACTACATGCGGCGCAAAAT 59.901 50.000 39.46 27.14 43.62 1.82
1598 1691 1.231296 TGACTACATGCGGCGCAAAA 61.231 50.000 39.46 24.29 43.62 2.44
1599 1692 1.669437 TGACTACATGCGGCGCAAA 60.669 52.632 39.46 24.66 43.62 3.68
1600 1693 2.047750 TGACTACATGCGGCGCAA 60.048 55.556 39.46 21.91 43.62 4.85
1601 1694 2.779951 AAGTGACTACATGCGGCGCA 62.780 55.000 38.09 38.09 44.86 6.09
1602 1695 2.100631 AAGTGACTACATGCGGCGC 61.101 57.895 27.44 27.44 0.00 6.53
1603 1696 1.014044 ACAAGTGACTACATGCGGCG 61.014 55.000 0.51 0.51 0.00 6.46
1604 1697 1.135972 CAACAAGTGACTACATGCGGC 60.136 52.381 0.00 0.00 0.00 6.53
1605 1698 2.412870 TCAACAAGTGACTACATGCGG 58.587 47.619 0.00 0.00 0.00 5.69
1606 1699 4.466567 TTTCAACAAGTGACTACATGCG 57.533 40.909 0.00 0.00 35.39 4.73
1607 1700 6.148480 AGAGATTTCAACAAGTGACTACATGC 59.852 38.462 0.00 0.00 35.39 4.06
1608 1701 7.664082 AGAGATTTCAACAAGTGACTACATG 57.336 36.000 0.00 0.00 35.39 3.21
1609 1702 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
1610 1703 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
1611 1704 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
1612 1705 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
1613 1706 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
1614 1707 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
1615 1708 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
1616 1709 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
1617 1710 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
1618 1711 9.050601 ACTTGTCTTTCTAGAGATTTCAACAAG 57.949 33.333 18.42 18.42 32.73 3.16
1619 1712 8.964476 ACTTGTCTTTCTAGAGATTTCAACAA 57.036 30.769 0.00 0.00 0.00 2.83
1633 1726 8.097662 CCTCTGTTCCTAAATACTTGTCTTTCT 58.902 37.037 0.00 0.00 0.00 2.52
1634 1727 7.334671 CCCTCTGTTCCTAAATACTTGTCTTTC 59.665 40.741 0.00 0.00 0.00 2.62
1635 1728 7.017254 TCCCTCTGTTCCTAAATACTTGTCTTT 59.983 37.037 0.00 0.00 0.00 2.52
1636 1729 6.500751 TCCCTCTGTTCCTAAATACTTGTCTT 59.499 38.462 0.00 0.00 0.00 3.01
1637 1730 6.023603 TCCCTCTGTTCCTAAATACTTGTCT 58.976 40.000 0.00 0.00 0.00 3.41
1638 1731 6.070710 ACTCCCTCTGTTCCTAAATACTTGTC 60.071 42.308 0.00 0.00 0.00 3.18
1639 1732 5.785940 ACTCCCTCTGTTCCTAAATACTTGT 59.214 40.000 0.00 0.00 0.00 3.16
1640 1733 6.301169 ACTCCCTCTGTTCCTAAATACTTG 57.699 41.667 0.00 0.00 0.00 3.16
1641 1734 9.725206 TTATACTCCCTCTGTTCCTAAATACTT 57.275 33.333 0.00 0.00 0.00 2.24
1642 1735 9.145442 GTTATACTCCCTCTGTTCCTAAATACT 57.855 37.037 0.00 0.00 0.00 2.12
1643 1736 9.145442 AGTTATACTCCCTCTGTTCCTAAATAC 57.855 37.037 0.00 0.00 0.00 1.89
1644 1737 9.364653 GAGTTATACTCCCTCTGTTCCTAAATA 57.635 37.037 0.00 0.00 39.28 1.40
1645 1738 8.068733 AGAGTTATACTCCCTCTGTTCCTAAAT 58.931 37.037 3.33 0.00 46.18 1.40
1646 1739 7.420029 AGAGTTATACTCCCTCTGTTCCTAAA 58.580 38.462 3.33 0.00 46.18 1.85
1647 1740 6.982899 AGAGTTATACTCCCTCTGTTCCTAA 58.017 40.000 3.33 0.00 46.18 2.69
1648 1741 6.593759 AGAGTTATACTCCCTCTGTTCCTA 57.406 41.667 3.33 0.00 46.18 2.94
1649 1742 5.475398 AGAGTTATACTCCCTCTGTTCCT 57.525 43.478 3.33 0.00 46.18 3.36
1650 1743 5.682730 GCAAGAGTTATACTCCCTCTGTTCC 60.683 48.000 3.33 0.00 46.18 3.62
1651 1744 5.105310 TGCAAGAGTTATACTCCCTCTGTTC 60.105 44.000 3.33 0.00 46.18 3.18
1652 1745 4.777896 TGCAAGAGTTATACTCCCTCTGTT 59.222 41.667 3.33 0.00 46.18 3.16
1653 1746 4.353777 TGCAAGAGTTATACTCCCTCTGT 58.646 43.478 3.33 0.00 46.18 3.41
1654 1747 5.510520 GGATGCAAGAGTTATACTCCCTCTG 60.511 48.000 0.00 0.00 46.18 3.35
1655 1748 4.591072 GGATGCAAGAGTTATACTCCCTCT 59.409 45.833 0.00 0.00 46.18 3.69
1656 1749 4.591072 AGGATGCAAGAGTTATACTCCCTC 59.409 45.833 0.00 0.00 46.18 4.30
1657 1750 4.561752 AGGATGCAAGAGTTATACTCCCT 58.438 43.478 0.00 0.00 46.18 4.20
1658 1751 4.262678 GGAGGATGCAAGAGTTATACTCCC 60.263 50.000 1.52 0.00 46.18 4.30
1659 1752 4.888917 GGAGGATGCAAGAGTTATACTCC 58.111 47.826 0.00 0.00 46.18 3.85
1660 1753 5.799827 AGGAGGATGCAAGAGTTATACTC 57.200 43.478 0.00 0.00 45.38 2.59
1661 1754 5.245075 GCTAGGAGGATGCAAGAGTTATACT 59.755 44.000 0.00 0.00 0.00 2.12
1662 1755 5.011125 TGCTAGGAGGATGCAAGAGTTATAC 59.989 44.000 0.00 0.00 33.48 1.47
1663 1756 5.011125 GTGCTAGGAGGATGCAAGAGTTATA 59.989 44.000 0.00 0.00 38.50 0.98
1664 1757 3.969976 TGCTAGGAGGATGCAAGAGTTAT 59.030 43.478 0.00 0.00 33.48 1.89
1665 1758 3.133003 GTGCTAGGAGGATGCAAGAGTTA 59.867 47.826 0.00 0.00 38.50 2.24
1666 1759 2.093235 GTGCTAGGAGGATGCAAGAGTT 60.093 50.000 0.00 0.00 38.50 3.01
1667 1760 1.484240 GTGCTAGGAGGATGCAAGAGT 59.516 52.381 0.00 0.00 38.50 3.24
1668 1761 1.761784 AGTGCTAGGAGGATGCAAGAG 59.238 52.381 0.00 0.00 38.50 2.85
1669 1762 1.871418 AGTGCTAGGAGGATGCAAGA 58.129 50.000 0.00 0.00 38.50 3.02
1670 1763 2.706339 AAGTGCTAGGAGGATGCAAG 57.294 50.000 0.00 0.00 38.50 4.01
1671 1764 4.778213 ATTAAGTGCTAGGAGGATGCAA 57.222 40.909 0.00 0.00 38.50 4.08
1672 1765 4.778213 AATTAAGTGCTAGGAGGATGCA 57.222 40.909 0.00 0.00 0.00 3.96
1673 1766 5.825151 AGAAAATTAAGTGCTAGGAGGATGC 59.175 40.000 0.00 0.00 0.00 3.91
1674 1767 8.207545 ACTAGAAAATTAAGTGCTAGGAGGATG 58.792 37.037 14.00 0.00 34.36 3.51
1675 1768 8.325477 ACTAGAAAATTAAGTGCTAGGAGGAT 57.675 34.615 14.00 0.00 34.36 3.24
1739 1832 7.416213 CCAATACAACCACCAATAACACATAGG 60.416 40.741 0.00 0.00 0.00 2.57
1877 1970 2.445525 ACCAACTAGAGGGCCAAGAAAA 59.554 45.455 6.18 0.00 0.00 2.29
1984 2081 5.983333 ATTTGGATCAGAGGGAGTATGTT 57.017 39.130 0.00 0.00 0.00 2.71
2015 2112 6.823497 ACCTACAAAGTTGTACTAAAGCAGA 58.177 36.000 0.00 0.00 42.35 4.26
2105 2202 1.005394 AACTGGCCTCGGTACAACG 60.005 57.895 3.32 0.00 0.00 4.10
2108 2205 0.320374 CTTCAACTGGCCTCGGTACA 59.680 55.000 3.32 0.00 0.00 2.90
2109 2206 1.019805 GCTTCAACTGGCCTCGGTAC 61.020 60.000 3.32 0.00 0.00 3.34
2110 2207 1.192146 AGCTTCAACTGGCCTCGGTA 61.192 55.000 3.32 0.00 0.00 4.02
2111 2208 2.032681 GCTTCAACTGGCCTCGGT 59.967 61.111 3.32 0.00 0.00 4.69
2112 2209 2.037136 CAGCTTCAACTGGCCTCGG 61.037 63.158 3.32 0.00 33.85 4.63
2113 2210 2.684843 GCAGCTTCAACTGGCCTCG 61.685 63.158 3.32 0.00 38.16 4.63
2153 2253 2.620251 TCTGGCAATTCAGTATCCCG 57.380 50.000 0.00 0.00 36.25 5.14
2267 2367 3.129638 TGAGGCAACAAAACTTGTGTACC 59.870 43.478 0.00 0.00 44.59 3.34
2268 2368 4.364415 TGAGGCAACAAAACTTGTGTAC 57.636 40.909 0.00 0.00 44.59 2.90
2331 2431 2.038295 CCTTGCACCAGAGAAAGAGAGT 59.962 50.000 0.00 0.00 0.00 3.24
2473 2573 6.711277 ACTCTACAGAAAAATATCACTGCCA 58.289 36.000 0.00 0.00 34.25 4.92
2630 2730 5.591643 TTTAAACAAGCGCTTCTAGAGTG 57.408 39.130 22.21 10.86 38.94 3.51
2720 2820 5.963176 TCATTGAGCAGCAAAAGTTATCA 57.037 34.783 0.00 0.00 40.48 2.15
2974 3141 6.426646 AGAACTTGTCAGTTATGAAGGACT 57.573 37.500 0.00 0.00 43.79 3.85
3010 3177 0.178953 ATCCTGCTTTGCCTGTTGGT 60.179 50.000 0.00 0.00 35.27 3.67
3110 3277 2.639347 TGAATCAGCTCCAAGGTCAGAA 59.361 45.455 0.00 0.00 0.00 3.02
3161 3328 2.032636 GCTTGGCTCAAAACAAACATGC 60.033 45.455 0.00 0.00 0.00 4.06
3210 3377 3.152341 ACAGCTCATTTGAACCCTTGAG 58.848 45.455 0.00 0.00 38.86 3.02
3238 3405 6.398234 TGCTCTAACACCAAAAAGCATTAA 57.602 33.333 0.00 0.00 35.02 1.40
3239 3406 6.588719 ATGCTCTAACACCAAAAAGCATTA 57.411 33.333 2.00 0.00 45.46 1.90
3240 3407 4.935352 TGCTCTAACACCAAAAAGCATT 57.065 36.364 0.00 0.00 35.02 3.56
3244 3411 7.601856 TCCAATTATGCTCTAACACCAAAAAG 58.398 34.615 0.00 0.00 0.00 2.27
3349 3516 2.744760 CTGATCTGGAACTCCTCCTCA 58.255 52.381 0.00 0.00 45.64 3.86
3501 3668 2.562296 AGGATCAGCCCAAGGTAAGAA 58.438 47.619 0.00 0.00 37.37 2.52
3504 3671 1.992557 ACAAGGATCAGCCCAAGGTAA 59.007 47.619 0.00 0.00 37.37 2.85
3514 3681 6.644347 ACTATGGTAGAACAACAAGGATCAG 58.356 40.000 0.00 0.00 0.00 2.90
3570 3737 2.234661 CACAGCAGGAGACAATAGTCCA 59.765 50.000 0.00 0.00 46.15 4.02
3578 3745 4.526650 TCTTATTACACACAGCAGGAGACA 59.473 41.667 0.00 0.00 0.00 3.41
3634 3801 1.452773 CGCACGAAAACTACGCACTTA 59.547 47.619 0.00 0.00 0.00 2.24
3641 3808 0.110823 CACAGCCGCACGAAAACTAC 60.111 55.000 0.00 0.00 0.00 2.73
3669 3836 6.015603 TTGGACACAAAAAGATGCATACATCA 60.016 34.615 8.63 0.00 43.42 3.07
3690 3857 3.221771 CCCGCATATTCTTCCATTTGGA 58.778 45.455 0.00 0.00 43.73 3.53
3696 3863 3.433031 CCTTGTACCCGCATATTCTTCCA 60.433 47.826 0.00 0.00 0.00 3.53
3718 3885 1.741706 AGCACATGCAGATGTAGTTGC 59.258 47.619 6.64 0.00 41.12 4.17
3760 3927 6.146601 TCTGTTCTGCTGATCTCTAATCAG 57.853 41.667 10.06 10.06 46.12 2.90
3762 3929 6.514947 ACATCTGTTCTGCTGATCTCTAATC 58.485 40.000 0.00 0.00 34.17 1.75
3763 3930 6.482898 ACATCTGTTCTGCTGATCTCTAAT 57.517 37.500 0.00 0.00 34.17 1.73
3790 3959 1.144936 CTTGCCCTCGAGCCCTAAG 59.855 63.158 6.99 4.86 0.00 2.18
3804 4613 8.919661 CAGATTGGTAAAAGAAAAATCTCTTGC 58.080 33.333 0.00 0.00 35.85 4.01
3807 4616 9.354673 TCACAGATTGGTAAAAGAAAAATCTCT 57.645 29.630 0.00 0.00 35.85 3.10
3828 4641 7.413000 CGAACAAATACACCCTAATCTTCACAG 60.413 40.741 0.00 0.00 0.00 3.66
3841 4654 5.741982 GCATTAACCATCGAACAAATACACC 59.258 40.000 0.00 0.00 0.00 4.16
3859 4672 5.791666 TCCAACAATCAATTGCTGCATTAA 58.208 33.333 1.84 0.00 41.38 1.40
3862 4675 3.512329 TCTCCAACAATCAATTGCTGCAT 59.488 39.130 1.84 0.00 41.38 3.96
3877 4690 3.964031 ACATCTACTCATCCCTCTCCAAC 59.036 47.826 0.00 0.00 0.00 3.77
3913 4726 8.897752 ACCTTTTCAAAGTTGATATCATCTAGC 58.102 33.333 15.13 1.39 37.00 3.42
3928 4741 9.848172 CGATCATTTACAAAAACCTTTTCAAAG 57.152 29.630 0.00 0.00 35.79 2.77
4067 4881 6.993902 ACACATGGCATTTTCAAGAAAGAAAT 59.006 30.769 0.00 0.00 37.35 2.17
4077 4891 2.364647 TCAGCAACACATGGCATTTTCA 59.635 40.909 0.00 0.00 0.00 2.69
4111 4925 7.390440 TCAGATGACAAGTTAAGTTGTATTGGG 59.610 37.037 24.99 15.89 40.83 4.12
4116 4932 9.391006 ACTTTTCAGATGACAAGTTAAGTTGTA 57.609 29.630 24.99 15.16 40.88 2.41
4117 4933 8.281212 ACTTTTCAGATGACAAGTTAAGTTGT 57.719 30.769 25.17 25.17 40.88 3.32
4166 4982 0.373716 GCAATAGCCGACCAACTTCG 59.626 55.000 0.00 0.00 38.80 3.79
4173 4989 0.039798 TACGATCGCAATAGCCGACC 60.040 55.000 16.60 0.00 37.52 4.79
4231 5047 2.386064 AAACCGAACGCACAGGGCTA 62.386 55.000 0.00 0.00 41.67 3.93
4232 5048 2.386064 TAAACCGAACGCACAGGGCT 62.386 55.000 0.00 0.00 41.67 5.19
4233 5049 1.303091 ATAAACCGAACGCACAGGGC 61.303 55.000 0.00 0.00 39.90 5.19
4234 5050 1.129811 GAATAAACCGAACGCACAGGG 59.870 52.381 0.00 0.00 0.00 4.45
4235 5051 1.201877 CGAATAAACCGAACGCACAGG 60.202 52.381 0.00 0.00 0.00 4.00
4236 5052 1.201877 CCGAATAAACCGAACGCACAG 60.202 52.381 0.00 0.00 0.00 3.66
4237 5053 0.791422 CCGAATAAACCGAACGCACA 59.209 50.000 0.00 0.00 0.00 4.57
4238 5054 0.792031 ACCGAATAAACCGAACGCAC 59.208 50.000 0.00 0.00 0.00 5.34
4239 5055 1.510776 AACCGAATAAACCGAACGCA 58.489 45.000 0.00 0.00 0.00 5.24
4240 5056 2.599739 AAACCGAATAAACCGAACGC 57.400 45.000 0.00 0.00 0.00 4.84
4241 5057 4.644044 TGTAAACCGAATAAACCGAACG 57.356 40.909 0.00 0.00 0.00 3.95
4242 5058 5.106594 ACCATGTAAACCGAATAAACCGAAC 60.107 40.000 0.00 0.00 0.00 3.95
4243 5059 5.002516 ACCATGTAAACCGAATAAACCGAA 58.997 37.500 0.00 0.00 0.00 4.30
4244 5060 4.577875 ACCATGTAAACCGAATAAACCGA 58.422 39.130 0.00 0.00 0.00 4.69
4245 5061 4.950434 ACCATGTAAACCGAATAAACCG 57.050 40.909 0.00 0.00 0.00 4.44
4246 5062 5.326292 CGAACCATGTAAACCGAATAAACC 58.674 41.667 0.00 0.00 0.00 3.27
4247 5063 5.106594 ACCGAACCATGTAAACCGAATAAAC 60.107 40.000 0.00 0.00 0.00 2.01
4248 5064 5.002516 ACCGAACCATGTAAACCGAATAAA 58.997 37.500 0.00 0.00 0.00 1.40
4249 5065 4.577875 ACCGAACCATGTAAACCGAATAA 58.422 39.130 0.00 0.00 0.00 1.40
4250 5066 4.205065 ACCGAACCATGTAAACCGAATA 57.795 40.909 0.00 0.00 0.00 1.75
4251 5067 3.062122 ACCGAACCATGTAAACCGAAT 57.938 42.857 0.00 0.00 0.00 3.34
4252 5068 2.547299 ACCGAACCATGTAAACCGAA 57.453 45.000 0.00 0.00 0.00 4.30
4253 5069 2.547299 AACCGAACCATGTAAACCGA 57.453 45.000 0.00 0.00 0.00 4.69
4254 5070 4.950434 ATAAACCGAACCATGTAAACCG 57.050 40.909 0.00 0.00 0.00 4.44
4255 5071 5.220643 CCGTATAAACCGAACCATGTAAACC 60.221 44.000 0.00 0.00 0.00 3.27
4256 5072 5.351189 ACCGTATAAACCGAACCATGTAAAC 59.649 40.000 0.00 0.00 0.00 2.01
4257 5073 5.486526 ACCGTATAAACCGAACCATGTAAA 58.513 37.500 0.00 0.00 0.00 2.01
4258 5074 5.083533 ACCGTATAAACCGAACCATGTAA 57.916 39.130 0.00 0.00 0.00 2.41
4259 5075 4.734398 ACCGTATAAACCGAACCATGTA 57.266 40.909 0.00 0.00 0.00 2.29
4260 5076 3.615224 ACCGTATAAACCGAACCATGT 57.385 42.857 0.00 0.00 0.00 3.21
4261 5077 4.950434 AAACCGTATAAACCGAACCATG 57.050 40.909 0.00 0.00 0.00 3.66
4262 5078 5.390779 CGAAAAACCGTATAAACCGAACCAT 60.391 40.000 0.00 0.00 0.00 3.55
4263 5079 4.084118 CGAAAAACCGTATAAACCGAACCA 60.084 41.667 0.00 0.00 0.00 3.67
4264 5080 4.393934 CGAAAAACCGTATAAACCGAACC 58.606 43.478 0.00 0.00 0.00 3.62
4265 5081 4.084066 ACCGAAAAACCGTATAAACCGAAC 60.084 41.667 0.00 0.00 0.00 3.95
4266 5082 4.061596 ACCGAAAAACCGTATAAACCGAA 58.938 39.130 0.00 0.00 0.00 4.30
4267 5083 3.658709 ACCGAAAAACCGTATAAACCGA 58.341 40.909 0.00 0.00 0.00 4.69
4268 5084 5.063312 ACATACCGAAAAACCGTATAAACCG 59.937 40.000 0.00 0.00 0.00 4.44
4269 5085 6.421377 ACATACCGAAAAACCGTATAAACC 57.579 37.500 0.00 0.00 0.00 3.27
4270 5086 7.110511 CGTACATACCGAAAAACCGTATAAAC 58.889 38.462 0.00 0.00 0.00 2.01
4271 5087 6.254589 CCGTACATACCGAAAAACCGTATAAA 59.745 38.462 0.00 0.00 0.00 1.40
4272 5088 5.746245 CCGTACATACCGAAAAACCGTATAA 59.254 40.000 0.00 0.00 0.00 0.98
4273 5089 5.163602 ACCGTACATACCGAAAAACCGTATA 60.164 40.000 0.00 0.00 0.00 1.47
4274 5090 4.111916 CCGTACATACCGAAAAACCGTAT 58.888 43.478 0.00 0.00 0.00 3.06
4275 5091 3.057174 ACCGTACATACCGAAAAACCGTA 60.057 43.478 0.00 0.00 0.00 4.02
4276 5092 2.288763 ACCGTACATACCGAAAAACCGT 60.289 45.455 0.00 0.00 0.00 4.83
4277 5093 2.336667 ACCGTACATACCGAAAAACCG 58.663 47.619 0.00 0.00 0.00 4.44
4278 5094 7.532682 TTAATACCGTACATACCGAAAAACC 57.467 36.000 0.00 0.00 0.00 3.27
4282 5098 9.677567 GAAGTATTAATACCGTACATACCGAAA 57.322 33.333 19.74 0.00 33.79 3.46
4283 5099 8.015087 CGAAGTATTAATACCGTACATACCGAA 58.985 37.037 19.74 0.00 33.79 4.30
4284 5100 7.360861 CCGAAGTATTAATACCGTACATACCGA 60.361 40.741 19.74 0.00 33.79 4.69
4285 5101 6.742718 CCGAAGTATTAATACCGTACATACCG 59.257 42.308 19.74 10.72 33.79 4.02
4286 5102 7.593825 ACCGAAGTATTAATACCGTACATACC 58.406 38.462 19.74 0.00 33.79 2.73
4292 5108 9.820229 CGTATTTACCGAAGTATTAATACCGTA 57.180 33.333 19.74 12.84 32.90 4.02
4293 5109 7.807907 CCGTATTTACCGAAGTATTAATACCGT 59.192 37.037 19.74 13.65 32.90 4.83
4294 5110 7.807907 ACCGTATTTACCGAAGTATTAATACCG 59.192 37.037 19.74 16.55 32.90 4.02
4301 5117 9.768662 ATTTCATACCGTATTTACCGAAGTATT 57.231 29.630 0.00 0.00 0.00 1.89
4302 5118 9.768662 AATTTCATACCGTATTTACCGAAGTAT 57.231 29.630 0.00 0.00 0.00 2.12
4304 5120 9.598517 TTAATTTCATACCGTATTTACCGAAGT 57.401 29.630 0.00 0.00 0.00 3.01
4315 5131 8.538856 CGAACCGTATTTTAATTTCATACCGTA 58.461 33.333 0.00 0.00 0.00 4.02
4316 5132 7.401080 CGAACCGTATTTTAATTTCATACCGT 58.599 34.615 0.00 0.00 0.00 4.83
4317 5133 6.847289 CCGAACCGTATTTTAATTTCATACCG 59.153 38.462 0.00 0.00 0.00 4.02
4318 5134 7.696755 ACCGAACCGTATTTTAATTTCATACC 58.303 34.615 0.00 0.00 0.00 2.73
4319 5135 9.558648 AAACCGAACCGTATTTTAATTTCATAC 57.441 29.630 0.00 0.00 0.00 2.39
4320 5136 9.771915 GAAACCGAACCGTATTTTAATTTCATA 57.228 29.630 0.00 0.00 0.00 2.15
4321 5137 7.482428 CGAAACCGAACCGTATTTTAATTTCAT 59.518 33.333 0.00 0.00 0.00 2.57
4322 5138 6.796072 CGAAACCGAACCGTATTTTAATTTCA 59.204 34.615 0.00 0.00 0.00 2.69
4323 5139 6.249050 CCGAAACCGAACCGTATTTTAATTTC 59.751 38.462 0.00 0.00 0.00 2.17
4324 5140 6.085573 CCGAAACCGAACCGTATTTTAATTT 58.914 36.000 0.00 0.00 0.00 1.82
4325 5141 5.181056 ACCGAAACCGAACCGTATTTTAATT 59.819 36.000 0.00 0.00 0.00 1.40
4326 5142 4.694982 ACCGAAACCGAACCGTATTTTAAT 59.305 37.500 0.00 0.00 0.00 1.40
4327 5143 4.061596 ACCGAAACCGAACCGTATTTTAA 58.938 39.130 0.00 0.00 0.00 1.52
4328 5144 3.658709 ACCGAAACCGAACCGTATTTTA 58.341 40.909 0.00 0.00 0.00 1.52
4329 5145 2.493035 ACCGAAACCGAACCGTATTTT 58.507 42.857 0.00 0.00 0.00 1.82
4330 5146 2.168326 ACCGAAACCGAACCGTATTT 57.832 45.000 0.00 0.00 0.00 1.40
4331 5147 3.525268 ATACCGAAACCGAACCGTATT 57.475 42.857 0.00 0.00 0.00 1.89
4332 5148 4.853924 ATATACCGAAACCGAACCGTAT 57.146 40.909 0.00 0.00 0.00 3.06
4333 5149 4.023536 GGTATATACCGAAACCGAACCGTA 60.024 45.833 16.11 0.00 36.50 4.02
4334 5150 3.243401 GGTATATACCGAAACCGAACCGT 60.243 47.826 16.11 0.00 36.50 4.83
4335 5151 3.308530 GGTATATACCGAAACCGAACCG 58.691 50.000 16.11 0.00 36.50 4.44
4355 5171 5.974751 CCGAAACCATACCGAAATAATTTGG 59.025 40.000 0.00 0.00 44.62 3.28
4356 5172 6.557110 ACCGAAACCATACCGAAATAATTTG 58.443 36.000 0.00 0.00 0.00 2.32
4357 5173 6.762702 ACCGAAACCATACCGAAATAATTT 57.237 33.333 0.00 0.00 0.00 1.82
4358 5174 9.729281 ATATACCGAAACCATACCGAAATAATT 57.271 29.630 0.00 0.00 0.00 1.40
4360 5176 9.638239 GTATATACCGAAACCATACCGAAATAA 57.362 33.333 1.02 0.00 0.00 1.40
4361 5177 8.250332 GGTATATACCGAAACCATACCGAAATA 58.750 37.037 16.11 0.00 36.50 1.40
4362 5178 7.099120 GGTATATACCGAAACCATACCGAAAT 58.901 38.462 16.11 0.00 36.50 2.17
4363 5179 6.454795 GGTATATACCGAAACCATACCGAAA 58.545 40.000 16.11 0.00 36.50 3.46
4364 5180 6.024552 GGTATATACCGAAACCATACCGAA 57.975 41.667 16.11 0.00 36.50 4.30
4365 5181 5.643379 GGTATATACCGAAACCATACCGA 57.357 43.478 16.11 0.00 36.50 4.69
4376 5192 9.683870 AACTTTGGTTTTTATGGTATATACCGA 57.316 29.630 23.82 13.54 39.83 4.69
4377 5193 9.724839 CAACTTTGGTTTTTATGGTATATACCG 57.275 33.333 23.82 9.53 40.37 4.02
4381 5197 7.971722 GCGTCAACTTTGGTTTTTATGGTATAT 59.028 33.333 0.00 0.00 32.73 0.86
4382 5198 7.306953 GCGTCAACTTTGGTTTTTATGGTATA 58.693 34.615 0.00 0.00 32.73 1.47
4383 5199 6.153756 GCGTCAACTTTGGTTTTTATGGTAT 58.846 36.000 0.00 0.00 32.73 2.73
4384 5200 5.521544 GCGTCAACTTTGGTTTTTATGGTA 58.478 37.500 0.00 0.00 32.73 3.25
4385 5201 4.364860 GCGTCAACTTTGGTTTTTATGGT 58.635 39.130 0.00 0.00 32.73 3.55
4386 5202 3.423867 CGCGTCAACTTTGGTTTTTATGG 59.576 43.478 0.00 0.00 32.73 2.74
4387 5203 4.283678 TCGCGTCAACTTTGGTTTTTATG 58.716 39.130 5.77 0.00 32.73 1.90
4388 5204 4.555348 TCGCGTCAACTTTGGTTTTTAT 57.445 36.364 5.77 0.00 32.73 1.40
4389 5205 4.352600 TTCGCGTCAACTTTGGTTTTTA 57.647 36.364 5.77 0.00 32.73 1.52
4390 5206 2.923605 TCGCGTCAACTTTGGTTTTT 57.076 40.000 5.77 0.00 32.73 1.94
4391 5207 2.923605 TTCGCGTCAACTTTGGTTTT 57.076 40.000 5.77 0.00 32.73 2.43
4392 5208 3.430333 AATTCGCGTCAACTTTGGTTT 57.570 38.095 5.77 0.00 32.73 3.27
4393 5209 3.112580 CAAATTCGCGTCAACTTTGGTT 58.887 40.909 5.77 0.00 35.86 3.67
4394 5210 2.356382 TCAAATTCGCGTCAACTTTGGT 59.644 40.909 5.77 0.00 0.00 3.67
4395 5211 2.993545 TCAAATTCGCGTCAACTTTGG 58.006 42.857 5.77 0.00 0.00 3.28
4396 5212 5.368552 TTTTCAAATTCGCGTCAACTTTG 57.631 34.783 5.77 10.10 0.00 2.77
4397 5213 5.746245 TCATTTTCAAATTCGCGTCAACTTT 59.254 32.000 5.77 0.00 0.00 2.66
4398 5214 5.173131 GTCATTTTCAAATTCGCGTCAACTT 59.827 36.000 5.77 0.00 0.00 2.66
4399 5215 4.675114 GTCATTTTCAAATTCGCGTCAACT 59.325 37.500 5.77 0.00 0.00 3.16
4400 5216 4.429812 CGTCATTTTCAAATTCGCGTCAAC 60.430 41.667 5.77 0.00 0.00 3.18
4401 5217 3.661728 CGTCATTTTCAAATTCGCGTCAA 59.338 39.130 5.77 0.00 0.00 3.18
4402 5218 3.222361 CGTCATTTTCAAATTCGCGTCA 58.778 40.909 5.77 0.00 0.00 4.35
4403 5219 3.223157 ACGTCATTTTCAAATTCGCGTC 58.777 40.909 5.77 0.00 31.15 5.19
4404 5220 3.262135 ACGTCATTTTCAAATTCGCGT 57.738 38.095 5.77 0.00 31.15 6.01
4405 5221 5.908240 ATTACGTCATTTTCAAATTCGCG 57.092 34.783 0.00 0.00 31.15 5.87
4431 5247 9.934190 GTGTTTTGAGTCATAAATTTGCAAATT 57.066 25.926 27.73 27.73 40.15 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.