Multiple sequence alignment - TraesCS7A01G264000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G264000 chr7A 100.000 5331 0 0 1 5331 262463539 262468869 0.000000e+00 9845.0
1 TraesCS7A01G264000 chr7D 95.075 2335 82 10 1 2334 246028213 246030515 0.000000e+00 3644.0
2 TraesCS7A01G264000 chr7D 96.855 1113 35 0 3550 4662 246031783 246032895 0.000000e+00 1862.0
3 TraesCS7A01G264000 chr7D 90.515 485 19 10 4873 5331 246033150 246033633 2.730000e-172 616.0
4 TraesCS7A01G264000 chr7D 85.992 257 16 6 3161 3417 246031472 246031708 1.900000e-64 257.0
5 TraesCS7A01G264000 chr7D 96.063 127 5 0 4657 4783 246033018 246033144 1.950000e-49 207.0
6 TraesCS7A01G264000 chr7D 90.385 156 10 4 2413 2565 246030522 246030675 3.260000e-47 200.0
7 TraesCS7A01G264000 chr7D 84.483 174 25 1 2751 2922 469243878 469243705 2.550000e-38 171.0
8 TraesCS7A01G264000 chr7D 97.778 45 0 1 2371 2415 358722557 358722514 5.730000e-10 76.8
9 TraesCS7A01G264000 chr7B 94.395 2230 85 19 1 2211 222303918 222306126 0.000000e+00 3389.0
10 TraesCS7A01G264000 chr7B 96.676 1113 37 0 3550 4662 222307818 222308930 0.000000e+00 1851.0
11 TraesCS7A01G264000 chr7B 90.071 705 33 16 4657 5331 222309053 222309750 0.000000e+00 880.0
12 TraesCS7A01G264000 chr7B 88.716 257 17 5 3161 3417 222307499 222307743 2.410000e-78 303.0
13 TraesCS7A01G264000 chr7B 87.975 158 11 5 2413 2565 222306220 222306374 4.240000e-41 180.0
14 TraesCS7A01G264000 chr7B 83.908 174 26 2 2751 2922 456541200 456541027 1.190000e-36 165.0
15 TraesCS7A01G264000 chr7B 94.000 100 6 0 2247 2346 222306122 222306221 9.250000e-33 152.0
16 TraesCS7A01G264000 chr7B 97.917 48 1 0 2371 2418 242718369 242718322 3.420000e-12 84.2
17 TraesCS7A01G264000 chr2D 84.444 180 26 1 2745 2922 46191113 46191292 5.490000e-40 176.0
18 TraesCS7A01G264000 chr2A 84.444 180 26 1 2745 2922 7798139 7798318 5.490000e-40 176.0
19 TraesCS7A01G264000 chr2A 84.483 174 25 1 2751 2922 159095230 159095057 2.550000e-38 171.0
20 TraesCS7A01G264000 chr2A 84.795 171 24 1 2754 2922 443131798 443131628 2.550000e-38 171.0
21 TraesCS7A01G264000 chr2A 83.908 174 26 1 2751 2922 358061600 358061427 1.190000e-36 165.0
22 TraesCS7A01G264000 chr1B 85.057 174 24 1 2751 2922 105938249 105938076 5.490000e-40 176.0
23 TraesCS7A01G264000 chr1B 95.833 48 2 0 2371 2418 411568746 411568793 1.590000e-10 78.7
24 TraesCS7A01G264000 chr5B 83.333 180 28 1 2745 2922 649851542 649851721 1.190000e-36 165.0
25 TraesCS7A01G264000 chr2B 97.826 46 1 0 2371 2416 206114778 206114823 4.430000e-11 80.5
26 TraesCS7A01G264000 chr4B 94.000 50 3 0 2368 2417 471335776 471335825 5.730000e-10 76.8
27 TraesCS7A01G264000 chr3A 86.486 74 4 3 2345 2414 109148681 109148752 5.730000e-10 76.8
28 TraesCS7A01G264000 chr3A 84.722 72 6 5 2345 2414 699881924 699881856 3.450000e-07 67.6
29 TraesCS7A01G264000 chr5A 93.878 49 3 0 2369 2417 11064126 11064174 2.060000e-09 75.0
30 TraesCS7A01G264000 chr3D 95.745 47 1 1 2372 2417 115025348 115025302 2.060000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G264000 chr7A 262463539 262468869 5330 False 9845.000000 9845 100.000000 1 5331 1 chr7A.!!$F1 5330
1 TraesCS7A01G264000 chr7D 246028213 246033633 5420 False 1131.000000 3644 92.480833 1 5331 6 chr7D.!!$F1 5330
2 TraesCS7A01G264000 chr7B 222303918 222309750 5832 False 1125.833333 3389 91.972167 1 5331 6 chr7B.!!$F1 5330

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
806 825 1.197036 GGAAGTTAACGCTGTTCCTGC 59.803 52.381 14.20 0.0 36.34 4.85 F
1131 1150 0.249489 CATCCTTCTTCGCCCTACCG 60.249 60.000 0.00 0.0 0.00 4.02 F
2582 2606 0.105778 TCGTGGTGTCATTGACTGCA 59.894 50.000 17.26 0.0 33.15 4.41 F
2909 2936 0.035458 GCCCCGATCCGATTCAGAAT 59.965 55.000 0.00 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1734 1753 0.039798 ACAGCTGCAGAACAATTGCG 60.040 50.0 20.43 0.0 44.40 4.85 R
2890 2917 0.035458 ATTCTGAATCGGATCGGGGC 59.965 55.0 0.00 0.0 0.00 5.80 R
3540 4310 0.178961 GGAAAAGGCAGACCCAAGGT 60.179 55.0 0.00 0.0 39.44 3.50 R
4828 5727 0.038166 TGACCAGGGCATCAAGAACC 59.962 55.0 0.00 0.0 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 4.787551 ACAGTAACCAGAACCAACATTCA 58.212 39.130 0.00 0.00 0.00 2.57
80 81 5.530171 ACATTCACATACTGCTGGATCAATC 59.470 40.000 0.00 0.00 0.00 2.67
84 85 3.134623 ACATACTGCTGGATCAATCGGAA 59.865 43.478 0.00 0.00 0.00 4.30
211 229 3.096092 ACTGTGGAATGAGAGAGGAGTC 58.904 50.000 0.00 0.00 0.00 3.36
214 232 2.755655 GTGGAATGAGAGAGGAGTCGAA 59.244 50.000 0.00 0.00 0.00 3.71
216 234 3.193691 TGGAATGAGAGAGGAGTCGAAAC 59.806 47.826 0.00 0.00 0.00 2.78
728 747 1.431488 CGCGTCATCCACCTTCATGG 61.431 60.000 0.00 0.00 41.57 3.66
802 821 4.806342 TTTCAGGAAGTTAACGCTGTTC 57.194 40.909 0.00 0.00 0.00 3.18
806 825 1.197036 GGAAGTTAACGCTGTTCCTGC 59.803 52.381 14.20 0.00 36.34 4.85
816 835 2.055689 CTGTTCCTGCTGGACCACCA 62.056 60.000 12.53 6.13 43.06 4.17
821 840 3.557903 CTGCTGGACCACCACCCTG 62.558 68.421 0.00 0.00 41.77 4.45
829 848 1.379044 CCACCACCCTGCTCCATTC 60.379 63.158 0.00 0.00 0.00 2.67
832 851 2.615465 CCACCCTGCTCCATTCCCA 61.615 63.158 0.00 0.00 0.00 4.37
887 906 4.538490 TGACAGGTGGTCCCTTATTTACAT 59.462 41.667 0.00 0.00 42.73 2.29
1098 1117 1.136110 CTCTTCTTCTTCCTCGCCTCC 59.864 57.143 0.00 0.00 0.00 4.30
1131 1150 0.249489 CATCCTTCTTCGCCCTACCG 60.249 60.000 0.00 0.00 0.00 4.02
1194 1213 3.587498 TCTTCTGGACTCTTCCTGGAAA 58.413 45.455 10.86 1.31 43.31 3.13
1371 1390 3.691609 GTCAGAGTTTAGGATTGGCTTGG 59.308 47.826 0.00 0.00 0.00 3.61
1394 1413 4.549458 GTTGTGGTGATGATTGGTTTCTG 58.451 43.478 0.00 0.00 0.00 3.02
1533 1552 9.720769 CTTGTAATGGAGTAAGACTTCCTTTTA 57.279 33.333 0.00 0.00 36.34 1.52
1562 1581 9.378551 TGTATGTACTGTTAAACTTGGATCATC 57.621 33.333 0.00 0.00 0.00 2.92
1576 1595 2.369860 GGATCATCTGGCCATGTACTGA 59.630 50.000 5.51 5.59 0.00 3.41
1614 1633 4.762765 AGTATAGGCTCGTGGAGTCAATAG 59.237 45.833 0.00 0.00 36.65 1.73
1701 1720 3.615056 CGTTGTCGATTGGCTATGTTACA 59.385 43.478 0.00 0.00 39.71 2.41
1704 1723 4.827692 TGTCGATTGGCTATGTTACAAGT 58.172 39.130 0.00 0.00 0.00 3.16
1830 1849 2.025981 TGAGGTTGCTGCATACTGGAAT 60.026 45.455 1.84 0.00 0.00 3.01
1858 1877 1.349067 GTACTGGAGTCACTTGGGGT 58.651 55.000 0.00 0.00 0.00 4.95
1883 1902 3.805207 ACGAAGGCTTCTACTGTTGTTT 58.195 40.909 23.74 0.00 0.00 2.83
1905 1924 5.722021 TCTATGTAGTGCACTTCTGTTCA 57.278 39.130 27.06 14.38 0.00 3.18
1906 1925 6.096673 TCTATGTAGTGCACTTCTGTTCAA 57.903 37.500 27.06 0.09 0.00 2.69
1927 1946 9.624697 GTTCAAAAACTAATCATGTGCTTATCA 57.375 29.630 0.00 0.00 32.36 2.15
2002 2021 5.012664 TGAGCAAACTAGAGGTTATGTGGAA 59.987 40.000 0.00 0.00 37.12 3.53
2008 2027 3.703001 AGAGGTTATGTGGAAGTGGTG 57.297 47.619 0.00 0.00 0.00 4.17
2114 2133 6.484977 AGAAACAGTTCTTCCAGCTCTTTTAG 59.515 38.462 0.00 0.00 41.55 1.85
2125 2144 6.273825 TCCAGCTCTTTTAGAACATCGATAC 58.726 40.000 0.00 0.00 0.00 2.24
2172 2191 5.733373 GCCAAAGAAAAGATAGGTATTGCCG 60.733 44.000 0.00 0.00 43.70 5.69
2174 2193 6.238484 CCAAAGAAAAGATAGGTATTGCCGAG 60.238 42.308 0.00 0.00 43.70 4.63
2242 2261 8.319057 ACCAATTATCTTAGTCATACTGTCCA 57.681 34.615 0.00 0.00 0.00 4.02
2243 2262 8.938883 ACCAATTATCTTAGTCATACTGTCCAT 58.061 33.333 0.00 0.00 0.00 3.41
2244 2263 9.784531 CCAATTATCTTAGTCATACTGTCCATT 57.215 33.333 0.00 0.00 0.00 3.16
2279 2298 6.700960 CCAAGCTATTTTGTTCATTGTTCACA 59.299 34.615 0.00 0.00 0.00 3.58
2290 2309 6.096705 TGTTCATTGTTCACATCAAAGGTCTT 59.903 34.615 0.00 0.00 0.00 3.01
2332 2351 6.327365 TGAGGATCTTAGCATAATGTGAAGGA 59.673 38.462 0.00 0.00 34.92 3.36
2349 2368 8.367660 TGTGAAGGATGGATATAGAATACTCC 57.632 38.462 0.00 0.00 0.00 3.85
2350 2369 7.400339 TGTGAAGGATGGATATAGAATACTCCC 59.600 40.741 0.00 0.00 0.00 4.30
2351 2370 7.621683 GTGAAGGATGGATATAGAATACTCCCT 59.378 40.741 0.00 0.00 0.00 4.20
2352 2371 7.841729 TGAAGGATGGATATAGAATACTCCCTC 59.158 40.741 0.00 0.00 0.00 4.30
2353 2372 6.688554 AGGATGGATATAGAATACTCCCTCC 58.311 44.000 4.69 4.69 39.13 4.30
2354 2373 5.536916 GGATGGATATAGAATACTCCCTCCG 59.463 48.000 0.00 0.00 33.77 4.63
2355 2374 5.791303 TGGATATAGAATACTCCCTCCGA 57.209 43.478 0.00 0.00 0.00 4.55
2356 2375 6.342819 TGGATATAGAATACTCCCTCCGAT 57.657 41.667 0.00 0.00 0.00 4.18
2357 2376 6.366340 TGGATATAGAATACTCCCTCCGATC 58.634 44.000 0.00 0.00 0.00 3.69
2358 2377 6.160636 TGGATATAGAATACTCCCTCCGATCT 59.839 42.308 0.00 0.00 0.00 2.75
2359 2378 7.064229 GGATATAGAATACTCCCTCCGATCTT 58.936 42.308 0.00 0.00 0.00 2.40
2360 2379 8.219178 GGATATAGAATACTCCCTCCGATCTTA 58.781 40.741 0.00 0.00 0.00 2.10
2361 2380 9.280174 GATATAGAATACTCCCTCCGATCTTAG 57.720 40.741 0.00 0.00 0.00 2.18
2362 2381 4.083565 AGAATACTCCCTCCGATCTTAGC 58.916 47.826 0.00 0.00 0.00 3.09
2363 2382 3.527507 ATACTCCCTCCGATCTTAGCA 57.472 47.619 0.00 0.00 0.00 3.49
2364 2383 2.390225 ACTCCCTCCGATCTTAGCAT 57.610 50.000 0.00 0.00 0.00 3.79
2365 2384 3.527507 ACTCCCTCCGATCTTAGCATA 57.472 47.619 0.00 0.00 0.00 3.14
2366 2385 3.845860 ACTCCCTCCGATCTTAGCATAA 58.154 45.455 0.00 0.00 0.00 1.90
2367 2386 4.421131 ACTCCCTCCGATCTTAGCATAAT 58.579 43.478 0.00 0.00 0.00 1.28
2368 2387 4.221703 ACTCCCTCCGATCTTAGCATAATG 59.778 45.833 0.00 0.00 0.00 1.90
2369 2388 4.160329 TCCCTCCGATCTTAGCATAATGT 58.840 43.478 0.00 0.00 0.00 2.71
2370 2389 4.220821 TCCCTCCGATCTTAGCATAATGTC 59.779 45.833 0.00 0.00 0.00 3.06
2371 2390 4.021104 CCCTCCGATCTTAGCATAATGTCA 60.021 45.833 0.00 0.00 0.00 3.58
2372 2391 5.337894 CCCTCCGATCTTAGCATAATGTCAT 60.338 44.000 0.00 0.00 0.00 3.06
2373 2392 6.169094 CCTCCGATCTTAGCATAATGTCATT 58.831 40.000 3.06 3.06 0.00 2.57
2374 2393 6.091849 CCTCCGATCTTAGCATAATGTCATTG 59.908 42.308 8.39 0.00 0.00 2.82
2375 2394 6.524734 TCCGATCTTAGCATAATGTCATTGT 58.475 36.000 8.39 0.00 0.00 2.71
2376 2395 7.666623 TCCGATCTTAGCATAATGTCATTGTA 58.333 34.615 8.39 0.00 0.00 2.41
2377 2396 8.314021 TCCGATCTTAGCATAATGTCATTGTAT 58.686 33.333 8.39 0.00 0.00 2.29
2378 2397 9.586435 CCGATCTTAGCATAATGTCATTGTATA 57.414 33.333 8.39 0.00 0.00 1.47
2383 2402 8.777865 TTAGCATAATGTCATTGTATAGAGGC 57.222 34.615 8.39 0.64 0.00 4.70
2384 2403 7.013823 AGCATAATGTCATTGTATAGAGGCT 57.986 36.000 8.39 2.98 0.00 4.58
2385 2404 6.877855 AGCATAATGTCATTGTATAGAGGCTG 59.122 38.462 8.39 0.00 0.00 4.85
2386 2405 6.402983 GCATAATGTCATTGTATAGAGGCTGC 60.403 42.308 8.39 0.00 0.00 5.25
2387 2406 4.694760 ATGTCATTGTATAGAGGCTGCA 57.305 40.909 0.50 0.00 0.00 4.41
2388 2407 4.694760 TGTCATTGTATAGAGGCTGCAT 57.305 40.909 0.50 0.00 0.00 3.96
2389 2408 4.635223 TGTCATTGTATAGAGGCTGCATC 58.365 43.478 6.12 6.12 0.00 3.91
2390 2409 4.101430 TGTCATTGTATAGAGGCTGCATCA 59.899 41.667 17.19 3.11 0.00 3.07
2391 2410 5.059161 GTCATTGTATAGAGGCTGCATCAA 58.941 41.667 17.19 2.44 0.00 2.57
2392 2411 5.704515 GTCATTGTATAGAGGCTGCATCAAT 59.295 40.000 17.19 4.81 0.00 2.57
2393 2412 6.206243 GTCATTGTATAGAGGCTGCATCAATT 59.794 38.462 17.19 3.21 0.00 2.32
2394 2413 7.388776 GTCATTGTATAGAGGCTGCATCAATTA 59.611 37.037 17.19 0.58 0.00 1.40
2395 2414 7.938490 TCATTGTATAGAGGCTGCATCAATTAA 59.062 33.333 17.19 5.44 0.00 1.40
2396 2415 8.737175 CATTGTATAGAGGCTGCATCAATTAAT 58.263 33.333 17.19 7.38 0.00 1.40
2397 2416 8.696043 TTGTATAGAGGCTGCATCAATTAATT 57.304 30.769 17.19 0.00 0.00 1.40
2398 2417 8.327941 TGTATAGAGGCTGCATCAATTAATTC 57.672 34.615 17.19 1.34 0.00 2.17
2399 2418 4.825546 AGAGGCTGCATCAATTAATTCG 57.174 40.909 17.19 0.00 0.00 3.34
2400 2419 3.567164 AGAGGCTGCATCAATTAATTCGG 59.433 43.478 17.19 0.00 0.00 4.30
2401 2420 3.554934 AGGCTGCATCAATTAATTCGGA 58.445 40.909 0.50 0.00 0.00 4.55
2402 2421 4.147321 AGGCTGCATCAATTAATTCGGAT 58.853 39.130 0.50 0.00 0.00 4.18
2403 2422 4.217118 AGGCTGCATCAATTAATTCGGATC 59.783 41.667 0.50 0.00 0.00 3.36
2404 2423 4.153986 GCTGCATCAATTAATTCGGATCG 58.846 43.478 0.00 0.00 0.00 3.69
2405 2424 4.715896 CTGCATCAATTAATTCGGATCGG 58.284 43.478 0.00 0.00 0.00 4.18
2406 2425 4.384940 TGCATCAATTAATTCGGATCGGA 58.615 39.130 0.00 0.00 0.00 4.55
2407 2426 4.452114 TGCATCAATTAATTCGGATCGGAG 59.548 41.667 0.00 0.00 0.00 4.63
2408 2427 4.142816 GCATCAATTAATTCGGATCGGAGG 60.143 45.833 0.00 0.00 0.00 4.30
2409 2428 4.002906 TCAATTAATTCGGATCGGAGGG 57.997 45.455 0.00 0.00 0.00 4.30
2410 2429 3.644265 TCAATTAATTCGGATCGGAGGGA 59.356 43.478 0.00 0.00 0.00 4.20
2411 2430 3.963428 ATTAATTCGGATCGGAGGGAG 57.037 47.619 2.99 0.00 0.00 4.30
2412 2431 2.376695 TAATTCGGATCGGAGGGAGT 57.623 50.000 2.99 0.00 0.00 3.85
2413 2432 2.376695 AATTCGGATCGGAGGGAGTA 57.623 50.000 2.99 0.00 0.00 2.59
2414 2433 1.618487 ATTCGGATCGGAGGGAGTAC 58.382 55.000 2.99 0.00 0.00 2.73
2439 2458 1.649664 CTGGCGATGAAGTTCTCCAG 58.350 55.000 14.76 14.76 35.68 3.86
2445 2464 3.849911 CGATGAAGTTCTCCAGTGCTAA 58.150 45.455 4.17 0.00 0.00 3.09
2453 2472 7.936847 TGAAGTTCTCCAGTGCTAAAATTCTTA 59.063 33.333 4.17 0.00 0.00 2.10
2455 2474 9.959721 AAGTTCTCCAGTGCTAAAATTCTTATA 57.040 29.630 0.00 0.00 0.00 0.98
2517 2536 8.085296 AGTAGATAGATTGCAGTAATCCTTTCG 58.915 37.037 7.56 0.00 45.15 3.46
2523 2542 7.830739 AGATTGCAGTAATCCTTTCGAAAAAT 58.169 30.769 12.41 5.88 45.15 1.82
2524 2543 8.956426 AGATTGCAGTAATCCTTTCGAAAAATA 58.044 29.630 12.41 0.59 45.15 1.40
2525 2544 9.736023 GATTGCAGTAATCCTTTCGAAAAATAT 57.264 29.630 12.41 3.01 39.43 1.28
2565 2589 4.631377 TGTTCCTTGTATGAAGCAGATTCG 59.369 41.667 0.00 0.00 41.14 3.34
2566 2590 4.471904 TCCTTGTATGAAGCAGATTCGT 57.528 40.909 0.00 0.00 41.14 3.85
2567 2591 4.183865 TCCTTGTATGAAGCAGATTCGTG 58.816 43.478 3.23 0.00 41.14 4.35
2568 2592 3.310774 CCTTGTATGAAGCAGATTCGTGG 59.689 47.826 3.23 0.00 41.14 4.94
2569 2593 3.610040 TGTATGAAGCAGATTCGTGGT 57.390 42.857 3.23 0.00 41.14 4.16
2570 2594 3.261580 TGTATGAAGCAGATTCGTGGTG 58.738 45.455 3.23 0.00 41.14 4.17
2571 2595 2.479566 ATGAAGCAGATTCGTGGTGT 57.520 45.000 0.00 0.00 41.14 4.16
2572 2596 1.795768 TGAAGCAGATTCGTGGTGTC 58.204 50.000 0.00 0.00 41.14 3.67
2573 2597 1.069978 TGAAGCAGATTCGTGGTGTCA 59.930 47.619 0.00 0.00 41.14 3.58
2574 2598 2.289631 TGAAGCAGATTCGTGGTGTCAT 60.290 45.455 0.00 0.00 41.14 3.06
2575 2599 2.479566 AGCAGATTCGTGGTGTCATT 57.520 45.000 0.00 0.00 0.00 2.57
2576 2600 2.079158 AGCAGATTCGTGGTGTCATTG 58.921 47.619 0.00 0.00 0.00 2.82
2577 2601 2.076100 GCAGATTCGTGGTGTCATTGA 58.924 47.619 0.00 0.00 0.00 2.57
2578 2602 2.159653 GCAGATTCGTGGTGTCATTGAC 60.160 50.000 9.93 9.93 0.00 3.18
2579 2603 3.329386 CAGATTCGTGGTGTCATTGACT 58.671 45.455 17.26 0.00 33.15 3.41
2580 2604 3.124128 CAGATTCGTGGTGTCATTGACTG 59.876 47.826 17.26 0.36 33.15 3.51
2581 2605 1.225855 TTCGTGGTGTCATTGACTGC 58.774 50.000 17.26 10.11 33.15 4.40
2582 2606 0.105778 TCGTGGTGTCATTGACTGCA 59.894 50.000 17.26 0.00 33.15 4.41
2583 2607 1.159285 CGTGGTGTCATTGACTGCAT 58.841 50.000 17.26 0.00 33.15 3.96
2584 2608 1.536766 CGTGGTGTCATTGACTGCATT 59.463 47.619 17.26 0.00 33.15 3.56
2585 2609 2.413239 CGTGGTGTCATTGACTGCATTC 60.413 50.000 17.26 0.00 33.15 2.67
2586 2610 2.816087 GTGGTGTCATTGACTGCATTCT 59.184 45.455 17.26 0.00 33.15 2.40
2587 2611 3.254166 GTGGTGTCATTGACTGCATTCTT 59.746 43.478 17.26 0.00 33.15 2.52
2588 2612 4.455533 GTGGTGTCATTGACTGCATTCTTA 59.544 41.667 17.26 0.00 33.15 2.10
2589 2613 5.048782 GTGGTGTCATTGACTGCATTCTTAA 60.049 40.000 17.26 0.00 33.15 1.85
2590 2614 5.181811 TGGTGTCATTGACTGCATTCTTAAG 59.818 40.000 17.26 0.00 33.15 1.85
2591 2615 5.182001 GGTGTCATTGACTGCATTCTTAAGT 59.818 40.000 17.26 0.00 33.15 2.24
2592 2616 6.294176 GGTGTCATTGACTGCATTCTTAAGTT 60.294 38.462 17.26 0.00 33.15 2.66
2593 2617 6.580041 GTGTCATTGACTGCATTCTTAAGTTG 59.420 38.462 17.26 3.34 33.15 3.16
2594 2618 6.088824 GTCATTGACTGCATTCTTAAGTTGG 58.911 40.000 9.59 0.00 0.00 3.77
2595 2619 4.503741 TTGACTGCATTCTTAAGTTGGC 57.496 40.909 5.59 5.35 0.00 4.52
2596 2620 3.485394 TGACTGCATTCTTAAGTTGGCA 58.515 40.909 5.59 13.90 0.00 4.92
2597 2621 4.081406 TGACTGCATTCTTAAGTTGGCAT 58.919 39.130 14.63 8.07 0.00 4.40
2598 2622 5.252547 TGACTGCATTCTTAAGTTGGCATA 58.747 37.500 14.63 5.83 0.00 3.14
2640 2664 8.618677 CATCAAGCAGTGTAGAAAATCATATGT 58.381 33.333 1.90 0.00 0.00 2.29
2670 2694 8.279800 TGTCGTATTTGTCTTTGTTTAGATGTG 58.720 33.333 0.00 0.00 0.00 3.21
2685 2709 3.954200 AGATGTGTGATGTAACCATGCA 58.046 40.909 0.00 0.00 0.00 3.96
2700 2724 6.865834 AACCATGCAAATTATTTCCCTGTA 57.134 33.333 0.00 0.00 0.00 2.74
2745 2772 7.816995 GTGCAAATTGGGAGTGAATATGTTAAA 59.183 33.333 0.00 0.00 0.00 1.52
2746 2773 8.370940 TGCAAATTGGGAGTGAATATGTTAAAA 58.629 29.630 0.00 0.00 0.00 1.52
2747 2774 8.872845 GCAAATTGGGAGTGAATATGTTAAAAG 58.127 33.333 0.00 0.00 0.00 2.27
2748 2775 9.927668 CAAATTGGGAGTGAATATGTTAAAAGT 57.072 29.630 0.00 0.00 0.00 2.66
2751 2778 9.975218 ATTGGGAGTGAATATGTTAAAAGTAGT 57.025 29.630 0.00 0.00 0.00 2.73
2752 2779 9.444600 TTGGGAGTGAATATGTTAAAAGTAGTC 57.555 33.333 0.00 0.00 0.00 2.59
2753 2780 8.598916 TGGGAGTGAATATGTTAAAAGTAGTCA 58.401 33.333 0.00 0.00 0.00 3.41
2754 2781 9.099454 GGGAGTGAATATGTTAAAAGTAGTCAG 57.901 37.037 0.00 0.00 0.00 3.51
2755 2782 9.871238 GGAGTGAATATGTTAAAAGTAGTCAGA 57.129 33.333 0.00 0.00 0.00 3.27
2760 2787 9.851043 GAATATGTTAAAAGTAGTCAGAATCGC 57.149 33.333 0.00 0.00 0.00 4.58
2761 2788 5.756950 TGTTAAAAGTAGTCAGAATCGCG 57.243 39.130 0.00 0.00 0.00 5.87
2762 2789 5.463286 TGTTAAAAGTAGTCAGAATCGCGA 58.537 37.500 13.09 13.09 0.00 5.87
2763 2790 6.097356 TGTTAAAAGTAGTCAGAATCGCGAT 58.903 36.000 17.62 17.62 0.00 4.58
2764 2791 6.588756 TGTTAAAAGTAGTCAGAATCGCGATT 59.411 34.615 32.97 32.97 0.00 3.34
2765 2792 5.704217 AAAAGTAGTCAGAATCGCGATTC 57.296 39.130 41.15 41.15 45.66 2.52
2774 2801 3.206271 GAATCGCGATTCTGTTGTACG 57.794 47.619 40.72 0.00 42.85 3.67
2775 2802 2.554806 ATCGCGATTCTGTTGTACGA 57.445 45.000 17.62 0.00 0.00 3.43
2776 2803 2.554806 TCGCGATTCTGTTGTACGAT 57.445 45.000 3.71 0.00 0.00 3.73
2777 2804 2.871133 TCGCGATTCTGTTGTACGATT 58.129 42.857 3.71 0.00 0.00 3.34
2778 2805 2.850060 TCGCGATTCTGTTGTACGATTC 59.150 45.455 3.71 0.00 0.00 2.52
2779 2806 2.852413 CGCGATTCTGTTGTACGATTCT 59.148 45.455 0.00 0.00 0.00 2.40
2780 2807 4.033019 CGCGATTCTGTTGTACGATTCTA 58.967 43.478 0.00 0.00 0.00 2.10
2781 2808 4.086227 CGCGATTCTGTTGTACGATTCTAC 60.086 45.833 0.00 0.00 0.00 2.59
2782 2809 4.086227 GCGATTCTGTTGTACGATTCTACG 60.086 45.833 0.00 0.00 39.31 3.51
2783 2810 5.260900 CGATTCTGTTGTACGATTCTACGA 58.739 41.667 0.00 0.00 37.03 3.43
2784 2811 5.169208 CGATTCTGTTGTACGATTCTACGAC 59.831 44.000 0.00 0.00 37.03 4.34
2785 2812 5.618056 TTCTGTTGTACGATTCTACGACT 57.382 39.130 0.00 0.00 33.61 4.18
2786 2813 5.618056 TCTGTTGTACGATTCTACGACTT 57.382 39.130 0.00 0.00 33.61 3.01
2787 2814 5.388111 TCTGTTGTACGATTCTACGACTTG 58.612 41.667 0.00 0.00 33.61 3.16
2788 2815 5.179929 TCTGTTGTACGATTCTACGACTTGA 59.820 40.000 0.00 0.00 33.61 3.02
2789 2816 5.149273 TGTTGTACGATTCTACGACTTGAC 58.851 41.667 0.00 0.00 33.61 3.18
2790 2817 5.149273 GTTGTACGATTCTACGACTTGACA 58.851 41.667 0.00 0.00 37.03 3.58
2791 2818 5.361135 TGTACGATTCTACGACTTGACAA 57.639 39.130 0.00 0.00 37.03 3.18
2792 2819 5.946298 TGTACGATTCTACGACTTGACAAT 58.054 37.500 0.00 0.00 37.03 2.71
2793 2820 6.025896 TGTACGATTCTACGACTTGACAATC 58.974 40.000 0.00 0.00 37.03 2.67
2794 2821 4.421948 ACGATTCTACGACTTGACAATCC 58.578 43.478 0.00 0.00 37.03 3.01
2795 2822 4.082408 ACGATTCTACGACTTGACAATCCA 60.082 41.667 0.00 0.00 37.03 3.41
2796 2823 4.862574 CGATTCTACGACTTGACAATCCAA 59.137 41.667 0.00 0.00 35.09 3.53
2797 2824 5.347635 CGATTCTACGACTTGACAATCCAAA 59.652 40.000 0.00 0.00 35.09 3.28
2798 2825 5.917541 TTCTACGACTTGACAATCCAAAC 57.082 39.130 0.00 0.00 0.00 2.93
2799 2826 5.209818 TCTACGACTTGACAATCCAAACT 57.790 39.130 0.00 0.00 0.00 2.66
2800 2827 6.335471 TCTACGACTTGACAATCCAAACTA 57.665 37.500 0.00 0.00 0.00 2.24
2801 2828 6.751157 TCTACGACTTGACAATCCAAACTAA 58.249 36.000 0.00 0.00 0.00 2.24
2802 2829 5.668558 ACGACTTGACAATCCAAACTAAC 57.331 39.130 0.00 0.00 0.00 2.34
2803 2830 5.365619 ACGACTTGACAATCCAAACTAACT 58.634 37.500 0.00 0.00 0.00 2.24
2804 2831 5.465724 ACGACTTGACAATCCAAACTAACTC 59.534 40.000 0.00 0.00 0.00 3.01
2805 2832 5.465390 CGACTTGACAATCCAAACTAACTCA 59.535 40.000 0.00 0.00 0.00 3.41
2806 2833 6.147821 CGACTTGACAATCCAAACTAACTCAT 59.852 38.462 0.00 0.00 0.00 2.90
2807 2834 7.206981 ACTTGACAATCCAAACTAACTCATG 57.793 36.000 0.00 0.00 0.00 3.07
2808 2835 6.998074 ACTTGACAATCCAAACTAACTCATGA 59.002 34.615 0.00 0.00 0.00 3.07
2809 2836 7.667219 ACTTGACAATCCAAACTAACTCATGAT 59.333 33.333 0.00 0.00 0.00 2.45
2810 2837 8.408043 TTGACAATCCAAACTAACTCATGATT 57.592 30.769 0.00 0.00 0.00 2.57
2811 2838 8.044060 TGACAATCCAAACTAACTCATGATTC 57.956 34.615 0.00 0.00 0.00 2.52
2812 2839 7.884877 TGACAATCCAAACTAACTCATGATTCT 59.115 33.333 0.00 0.00 0.00 2.40
2813 2840 9.383519 GACAATCCAAACTAACTCATGATTCTA 57.616 33.333 0.00 0.00 0.00 2.10
2814 2841 9.911788 ACAATCCAAACTAACTCATGATTCTAT 57.088 29.630 0.00 0.00 0.00 1.98
2826 2853 8.447924 ACTCATGATTCTATGATTCTGTTTGG 57.552 34.615 0.00 0.00 36.55 3.28
2827 2854 8.051535 ACTCATGATTCTATGATTCTGTTTGGT 58.948 33.333 0.00 0.00 36.55 3.67
2828 2855 9.551734 CTCATGATTCTATGATTCTGTTTGGTA 57.448 33.333 0.00 0.00 36.55 3.25
2829 2856 9.904198 TCATGATTCTATGATTCTGTTTGGTAA 57.096 29.630 0.00 0.00 32.39 2.85
2844 2871 9.349713 TCTGTTTGGTAAAATCTATGTTTCTGT 57.650 29.630 0.00 0.00 0.00 3.41
2845 2872 9.398170 CTGTTTGGTAAAATCTATGTTTCTGTG 57.602 33.333 0.00 0.00 0.00 3.66
2846 2873 9.126151 TGTTTGGTAAAATCTATGTTTCTGTGA 57.874 29.630 0.00 0.00 0.00 3.58
2856 2883 9.436957 AATCTATGTTTCTGTGATTTTCGTAGT 57.563 29.630 0.00 0.00 0.00 2.73
2857 2884 8.239681 TCTATGTTTCTGTGATTTTCGTAGTG 57.760 34.615 0.00 0.00 0.00 2.74
2858 2885 8.085909 TCTATGTTTCTGTGATTTTCGTAGTGA 58.914 33.333 0.00 0.00 0.00 3.41
2859 2886 6.912203 TGTTTCTGTGATTTTCGTAGTGAA 57.088 33.333 0.00 0.00 33.85 3.18
2860 2887 6.943981 TGTTTCTGTGATTTTCGTAGTGAAG 58.056 36.000 0.00 0.00 37.99 3.02
2861 2888 6.759356 TGTTTCTGTGATTTTCGTAGTGAAGA 59.241 34.615 0.00 0.00 37.99 2.87
2862 2889 7.441157 TGTTTCTGTGATTTTCGTAGTGAAGAT 59.559 33.333 0.00 0.00 37.99 2.40
2863 2890 7.962964 TTCTGTGATTTTCGTAGTGAAGATT 57.037 32.000 0.00 0.00 37.99 2.40
2864 2891 7.582435 TCTGTGATTTTCGTAGTGAAGATTC 57.418 36.000 0.00 0.00 37.99 2.52
2865 2892 7.378966 TCTGTGATTTTCGTAGTGAAGATTCT 58.621 34.615 0.00 0.00 37.99 2.40
2866 2893 7.329471 TCTGTGATTTTCGTAGTGAAGATTCTG 59.671 37.037 0.00 0.00 37.99 3.02
2867 2894 6.128553 TGTGATTTTCGTAGTGAAGATTCTGC 60.129 38.462 0.00 0.00 37.99 4.26
2868 2895 4.903638 TTTTCGTAGTGAAGATTCTGCG 57.096 40.909 0.00 0.00 37.99 5.18
2869 2896 3.842732 TTCGTAGTGAAGATTCTGCGA 57.157 42.857 0.00 0.00 44.08 5.10
2870 2897 4.371855 TTCGTAGTGAAGATTCTGCGAT 57.628 40.909 6.25 0.00 44.79 4.58
2871 2898 5.494632 TTCGTAGTGAAGATTCTGCGATA 57.505 39.130 6.25 0.00 44.79 2.92
2872 2899 5.690997 TCGTAGTGAAGATTCTGCGATAT 57.309 39.130 0.00 0.00 41.89 1.63
2873 2900 5.452777 TCGTAGTGAAGATTCTGCGATATG 58.547 41.667 0.00 0.00 41.89 1.78
2874 2901 4.089208 CGTAGTGAAGATTCTGCGATATGC 59.911 45.833 0.00 0.00 40.93 3.14
2883 2910 4.573162 GCGATATGCGACCCTACC 57.427 61.111 0.00 0.00 44.57 3.18
2884 2911 1.663739 GCGATATGCGACCCTACCA 59.336 57.895 0.00 0.00 44.57 3.25
2885 2912 0.246635 GCGATATGCGACCCTACCAT 59.753 55.000 0.00 0.00 44.57 3.55
2886 2913 1.337823 GCGATATGCGACCCTACCATT 60.338 52.381 0.00 0.00 44.57 3.16
2887 2914 2.094390 GCGATATGCGACCCTACCATTA 60.094 50.000 0.00 0.00 44.57 1.90
2888 2915 3.770666 CGATATGCGACCCTACCATTAG 58.229 50.000 0.00 0.00 44.57 1.73
2889 2916 3.428999 CGATATGCGACCCTACCATTAGG 60.429 52.174 0.00 0.00 43.01 2.69
2895 2922 3.157680 CCTACCATTAGGGCCCCG 58.842 66.667 21.43 4.38 41.41 5.73
2896 2923 1.460689 CCTACCATTAGGGCCCCGA 60.461 63.158 21.43 7.88 41.41 5.14
2897 2924 0.840722 CCTACCATTAGGGCCCCGAT 60.841 60.000 21.43 10.35 41.41 4.18
2898 2925 0.613777 CTACCATTAGGGCCCCGATC 59.386 60.000 21.43 0.00 42.05 3.69
2899 2926 0.838987 TACCATTAGGGCCCCGATCC 60.839 60.000 21.43 0.00 42.05 3.36
2900 2927 2.347490 CATTAGGGCCCCGATCCG 59.653 66.667 21.43 0.00 0.00 4.18
2901 2928 2.203182 ATTAGGGCCCCGATCCGA 59.797 61.111 21.43 0.00 0.00 4.55
2902 2929 1.229529 ATTAGGGCCCCGATCCGAT 60.230 57.895 21.43 0.00 0.00 4.18
2903 2930 0.840722 ATTAGGGCCCCGATCCGATT 60.841 55.000 21.43 0.00 0.00 3.34
2904 2931 1.477685 TTAGGGCCCCGATCCGATTC 61.478 60.000 21.43 0.00 0.00 2.52
2905 2932 2.666469 TAGGGCCCCGATCCGATTCA 62.666 60.000 21.43 0.00 0.00 2.57
2906 2933 2.031163 GGCCCCGATCCGATTCAG 59.969 66.667 0.00 0.00 0.00 3.02
2907 2934 2.507854 GGCCCCGATCCGATTCAGA 61.508 63.158 0.00 0.00 0.00 3.27
2908 2935 1.445942 GCCCCGATCCGATTCAGAA 59.554 57.895 0.00 0.00 0.00 3.02
2909 2936 0.035458 GCCCCGATCCGATTCAGAAT 59.965 55.000 0.00 0.00 0.00 2.40
2910 2937 1.941668 GCCCCGATCCGATTCAGAATC 60.942 57.143 12.62 12.62 34.52 2.52
2911 2938 1.344438 CCCCGATCCGATTCAGAATCA 59.656 52.381 20.87 4.98 37.78 2.57
2912 2939 2.408050 CCCGATCCGATTCAGAATCAC 58.592 52.381 20.87 9.34 37.78 3.06
2913 2940 2.054363 CCGATCCGATTCAGAATCACG 58.946 52.381 20.87 17.86 37.78 4.35
2914 2941 2.287608 CCGATCCGATTCAGAATCACGA 60.288 50.000 20.87 15.55 37.78 4.35
2915 2942 3.569548 CGATCCGATTCAGAATCACGAT 58.430 45.455 20.87 18.83 37.78 3.73
2916 2943 3.983988 CGATCCGATTCAGAATCACGATT 59.016 43.478 20.87 7.53 37.78 3.34
2917 2944 4.089208 CGATCCGATTCAGAATCACGATTC 59.911 45.833 20.87 11.11 45.66 2.52
2932 2959 5.651530 TCACGATTCTGACTATCAACCTTC 58.348 41.667 0.00 0.00 0.00 3.46
2949 2976 0.456482 TTCGAATTTGGCATGCTGCG 60.456 50.000 18.92 8.27 46.21 5.18
2952 2979 1.467204 CGAATTTGGCATGCTGCGTTA 60.467 47.619 18.92 0.00 46.21 3.18
2953 2980 1.919918 GAATTTGGCATGCTGCGTTAC 59.080 47.619 18.92 0.00 46.21 2.50
2970 2997 5.406175 TGCGTTACTATCCAAAACTGTACAC 59.594 40.000 0.00 0.00 0.00 2.90
3026 3053 0.266152 TTCCCCCTTTCCCTTTGCAA 59.734 50.000 0.00 0.00 0.00 4.08
3046 3073 5.826208 TGCAATCATCTTGAGCTCACATAAT 59.174 36.000 18.03 4.71 0.00 1.28
3064 3091 9.567776 TCACATAATTGGAATAAATACACCGAT 57.432 29.630 0.00 0.00 0.00 4.18
3067 3094 9.967245 CATAATTGGAATAAATACACCGATACG 57.033 33.333 0.00 0.00 0.00 3.06
3079 3106 5.700722 ACACCGATACGCTATATTCTTGA 57.299 39.130 0.00 0.00 0.00 3.02
3126 3153 3.057736 GTCAGTTCATGCAATGCAAGACT 60.058 43.478 13.45 13.32 46.21 3.24
3127 3154 3.570975 TCAGTTCATGCAATGCAAGACTT 59.429 39.130 13.45 0.80 46.21 3.01
3128 3155 4.038282 TCAGTTCATGCAATGCAAGACTTT 59.962 37.500 13.45 0.00 46.21 2.66
3129 3156 4.384846 CAGTTCATGCAATGCAAGACTTTC 59.615 41.667 13.45 4.25 46.21 2.62
3132 3159 2.404265 TGCAATGCAAGACTTTCACG 57.596 45.000 5.01 0.00 34.76 4.35
3133 3160 1.675483 TGCAATGCAAGACTTTCACGT 59.325 42.857 5.01 0.00 34.76 4.49
3134 3161 2.046313 GCAATGCAAGACTTTCACGTG 58.954 47.619 9.94 9.94 0.00 4.49
3135 3162 2.046313 CAATGCAAGACTTTCACGTGC 58.954 47.619 11.67 0.00 41.52 5.34
3136 3163 0.593128 ATGCAAGACTTTCACGTGCC 59.407 50.000 11.67 0.00 40.74 5.01
3138 3165 1.166531 GCAAGACTTTCACGTGCCCT 61.167 55.000 11.67 0.00 36.93 5.19
3139 3166 1.876416 GCAAGACTTTCACGTGCCCTA 60.876 52.381 11.67 0.00 36.93 3.53
3140 3167 2.489971 CAAGACTTTCACGTGCCCTAA 58.510 47.619 11.67 0.00 0.00 2.69
3160 3192 7.666623 CCCTAAATTTGTTGGTTACATGACTT 58.333 34.615 0.00 0.00 36.44 3.01
3161 3193 7.812669 CCCTAAATTTGTTGGTTACATGACTTC 59.187 37.037 0.00 0.00 36.44 3.01
3162 3194 8.576442 CCTAAATTTGTTGGTTACATGACTTCT 58.424 33.333 0.00 0.00 36.44 2.85
3177 3209 6.935208 ACATGACTTCTTTACTAACTCCAACC 59.065 38.462 0.00 0.00 0.00 3.77
3180 3212 6.099269 TGACTTCTTTACTAACTCCAACCACT 59.901 38.462 0.00 0.00 0.00 4.00
3181 3213 6.896883 ACTTCTTTACTAACTCCAACCACTT 58.103 36.000 0.00 0.00 0.00 3.16
3188 3958 5.063880 ACTAACTCCAACCACTTCATCAAC 58.936 41.667 0.00 0.00 0.00 3.18
3197 3967 6.659242 CCAACCACTTCATCAACTTACCTAAT 59.341 38.462 0.00 0.00 0.00 1.73
3199 3969 7.259088 ACCACTTCATCAACTTACCTAATCT 57.741 36.000 0.00 0.00 0.00 2.40
3224 3994 7.218228 TGATTTGTTGTCTGCTTTGTGATAT 57.782 32.000 0.00 0.00 0.00 1.63
3226 3996 6.389830 TTTGTTGTCTGCTTTGTGATATGT 57.610 33.333 0.00 0.00 0.00 2.29
3260 4030 3.733443 AATTTGTGCTGGGTTCTGTTC 57.267 42.857 0.00 0.00 0.00 3.18
3287 4057 7.798596 ATGATTGTCATCAGTCCAAGAATAC 57.201 36.000 0.00 0.00 42.93 1.89
3289 4059 7.397221 TGATTGTCATCAGTCCAAGAATACTT 58.603 34.615 0.00 0.00 34.22 2.24
3290 4060 7.884877 TGATTGTCATCAGTCCAAGAATACTTT 59.115 33.333 0.00 0.00 34.22 2.66
3291 4061 8.641498 ATTGTCATCAGTCCAAGAATACTTTT 57.359 30.769 0.00 0.00 33.70 2.27
3292 4062 7.672983 TGTCATCAGTCCAAGAATACTTTTC 57.327 36.000 0.00 0.00 33.70 2.29
3293 4063 7.223584 TGTCATCAGTCCAAGAATACTTTTCA 58.776 34.615 0.00 0.00 33.70 2.69
3294 4064 7.173218 TGTCATCAGTCCAAGAATACTTTTCAC 59.827 37.037 0.00 0.00 33.70 3.18
3295 4065 7.173218 GTCATCAGTCCAAGAATACTTTTCACA 59.827 37.037 0.00 0.00 33.70 3.58
3296 4066 7.388776 TCATCAGTCCAAGAATACTTTTCACAG 59.611 37.037 0.00 0.00 33.70 3.66
3306 4076 8.888579 AGAATACTTTTCACAGGTATAATCCG 57.111 34.615 0.00 0.00 0.00 4.18
3314 4084 3.187227 CACAGGTATAATCCGCAAGATGC 59.813 47.826 0.00 0.00 40.69 3.91
3322 4092 1.825090 TCCGCAAGATGCAGATTTGT 58.175 45.000 2.99 0.00 45.36 2.83
3333 4103 7.707624 AGATGCAGATTTGTGGAGAATAAAA 57.292 32.000 0.00 0.00 0.00 1.52
3334 4104 7.542025 AGATGCAGATTTGTGGAGAATAAAAC 58.458 34.615 0.00 0.00 0.00 2.43
3339 4109 7.063780 GCAGATTTGTGGAGAATAAAACCATTG 59.936 37.037 0.00 0.00 36.09 2.82
3422 4192 4.794169 ACAATGTTTTCATGGTTACTCGC 58.206 39.130 0.00 0.00 41.26 5.03
3423 4193 4.277174 ACAATGTTTTCATGGTTACTCGCA 59.723 37.500 0.00 0.00 41.26 5.10
3424 4194 5.218885 CAATGTTTTCATGGTTACTCGCAA 58.781 37.500 0.00 0.00 40.79 4.85
3425 4195 5.643379 ATGTTTTCATGGTTACTCGCAAT 57.357 34.783 0.00 0.00 39.30 3.56
3426 4196 6.751514 ATGTTTTCATGGTTACTCGCAATA 57.248 33.333 0.00 0.00 39.30 1.90
3427 4197 6.751514 TGTTTTCATGGTTACTCGCAATAT 57.248 33.333 0.00 0.00 0.00 1.28
3428 4198 6.781138 TGTTTTCATGGTTACTCGCAATATC 58.219 36.000 0.00 0.00 0.00 1.63
3429 4199 6.597672 TGTTTTCATGGTTACTCGCAATATCT 59.402 34.615 0.00 0.00 0.00 1.98
3430 4200 7.120579 TGTTTTCATGGTTACTCGCAATATCTT 59.879 33.333 0.00 0.00 0.00 2.40
3431 4201 8.609176 GTTTTCATGGTTACTCGCAATATCTTA 58.391 33.333 0.00 0.00 0.00 2.10
3432 4202 8.902540 TTTCATGGTTACTCGCAATATCTTAT 57.097 30.769 0.00 0.00 0.00 1.73
3433 4203 7.889589 TCATGGTTACTCGCAATATCTTATG 57.110 36.000 0.00 0.00 0.00 1.90
3434 4204 7.666623 TCATGGTTACTCGCAATATCTTATGA 58.333 34.615 0.00 0.00 0.00 2.15
3435 4205 8.147704 TCATGGTTACTCGCAATATCTTATGAA 58.852 33.333 0.00 0.00 0.00 2.57
3436 4206 7.709269 TGGTTACTCGCAATATCTTATGAAC 57.291 36.000 0.00 0.00 0.00 3.18
3437 4207 6.704493 TGGTTACTCGCAATATCTTATGAACC 59.296 38.462 0.00 0.00 33.60 3.62
3438 4208 6.929606 GGTTACTCGCAATATCTTATGAACCT 59.070 38.462 0.00 0.00 0.00 3.50
3439 4209 8.086522 GGTTACTCGCAATATCTTATGAACCTA 58.913 37.037 0.00 0.00 0.00 3.08
3440 4210 9.472361 GTTACTCGCAATATCTTATGAACCTAA 57.528 33.333 0.00 0.00 0.00 2.69
3442 4212 8.958119 ACTCGCAATATCTTATGAACCTAAAA 57.042 30.769 0.00 0.00 0.00 1.52
3443 4213 9.391006 ACTCGCAATATCTTATGAACCTAAAAA 57.609 29.630 0.00 0.00 0.00 1.94
3452 4222 8.477984 TCTTATGAACCTAAAAATTGCATTGC 57.522 30.769 0.46 0.46 0.00 3.56
3453 4223 8.313292 TCTTATGAACCTAAAAATTGCATTGCT 58.687 29.630 10.49 0.00 0.00 3.91
3456 4226 7.650834 TGAACCTAAAAATTGCATTGCTAAC 57.349 32.000 10.49 0.00 0.00 2.34
3469 4239 9.880157 ATTGCATTGCTAACTTTTCTATTCATT 57.120 25.926 10.49 0.00 0.00 2.57
3470 4240 8.692110 TGCATTGCTAACTTTTCTATTCATTG 57.308 30.769 10.49 0.00 0.00 2.82
3492 4262 6.086785 TGTGTCATTGATTTGATTGCTGAA 57.913 33.333 0.00 0.00 0.00 3.02
3497 4267 8.092068 TGTCATTGATTTGATTGCTGAATTCTT 58.908 29.630 7.05 0.00 0.00 2.52
3498 4268 8.380644 GTCATTGATTTGATTGCTGAATTCTTG 58.619 33.333 7.05 1.00 0.00 3.02
3499 4269 7.547722 TCATTGATTTGATTGCTGAATTCTTGG 59.452 33.333 7.05 0.00 0.00 3.61
3500 4270 6.349243 TGATTTGATTGCTGAATTCTTGGT 57.651 33.333 7.05 0.00 0.00 3.67
3501 4271 6.160684 TGATTTGATTGCTGAATTCTTGGTG 58.839 36.000 7.05 0.00 0.00 4.17
3502 4272 5.534207 TTTGATTGCTGAATTCTTGGTGT 57.466 34.783 7.05 0.00 0.00 4.16
3503 4273 4.508461 TGATTGCTGAATTCTTGGTGTG 57.492 40.909 7.05 0.00 0.00 3.82
3504 4274 3.890756 TGATTGCTGAATTCTTGGTGTGT 59.109 39.130 7.05 0.00 0.00 3.72
3505 4275 4.341806 TGATTGCTGAATTCTTGGTGTGTT 59.658 37.500 7.05 0.00 0.00 3.32
3509 4279 3.066621 GCTGAATTCTTGGTGTGTTGTCA 59.933 43.478 7.05 0.00 0.00 3.58
3521 4291 8.608844 TTGGTGTGTTGTCAATTTTAAACTTT 57.391 26.923 0.00 0.00 0.00 2.66
3543 4313 9.582648 ACTTTTTACTGTGGTAATTATTCACCT 57.417 29.630 14.98 6.82 37.69 4.00
3546 4316 7.931578 TTACTGTGGTAATTATTCACCTTGG 57.068 36.000 14.98 8.37 35.73 3.61
3547 4317 5.261216 ACTGTGGTAATTATTCACCTTGGG 58.739 41.667 14.98 0.00 35.73 4.12
3548 4318 5.222254 ACTGTGGTAATTATTCACCTTGGGT 60.222 40.000 14.98 0.00 35.73 4.51
3558 4328 0.961753 CACCTTGGGTCTGCCTTTTC 59.038 55.000 0.00 0.00 31.02 2.29
3587 4357 8.949177 CATGCTGATGTATATGCCTGTATTTTA 58.051 33.333 0.00 0.00 0.00 1.52
3644 4414 1.826385 AGGTTGCTACAATGCACTCC 58.174 50.000 0.00 0.00 43.20 3.85
3792 4562 4.768968 CCTTTCTTCCAAATCACTGGATGT 59.231 41.667 5.68 0.00 45.03 3.06
3830 4600 2.777692 GGGGAGGACAGGAATGTATTGA 59.222 50.000 0.00 0.00 0.00 2.57
3846 4616 1.089112 TTGATTGGTGATGCTGCTCG 58.911 50.000 0.00 0.00 0.00 5.03
3889 4659 1.347707 TGCCCTCTAACACCAAGTGAG 59.652 52.381 0.96 0.00 36.96 3.51
3973 4743 3.467803 GGATGGGTTAATGGAACTCGAG 58.532 50.000 11.84 11.84 38.21 4.04
4042 4812 5.585445 CCTGACTCATGAAGATTTTGAGAGG 59.415 44.000 6.19 0.40 39.36 3.69
4069 4839 1.601412 GGCAACACAAAAGCTGCTCTC 60.601 52.381 1.00 0.00 35.13 3.20
4111 4881 2.935849 CAGCGATGCTTATGTTACCACA 59.064 45.455 0.00 0.00 36.40 4.17
4165 4935 1.250328 TGAGAACAATGCAAGGGCTG 58.750 50.000 0.00 0.00 41.91 4.85
4204 4974 1.025113 GTAGGAGGGCCTTCGCAAAC 61.025 60.000 7.89 0.23 43.90 2.93
4261 5031 2.123428 GGCCATGTGGGATGCTCAC 61.123 63.158 0.00 0.00 40.01 3.51
4312 5082 2.165998 GCTCTCCCTGAACATTGCTTT 58.834 47.619 0.00 0.00 0.00 3.51
4331 5101 5.414454 TGCTTTTGTGAGTTCAAGTTGTAGT 59.586 36.000 2.11 0.00 0.00 2.73
4368 5138 3.679824 AACACAAGGGCTAGTCTACAC 57.320 47.619 0.00 0.00 0.00 2.90
4369 5139 1.544691 ACACAAGGGCTAGTCTACACG 59.455 52.381 0.00 0.00 0.00 4.49
4390 5160 1.890573 GCCACCTTCCAATTGGTAGCA 60.891 52.381 23.76 1.54 39.97 3.49
4557 5327 4.202172 GCCTCTCCTCCTGTATACTGTTTC 60.202 50.000 4.17 0.00 0.00 2.78
4592 5362 3.766676 AGTAGCTCAGACATGTACACG 57.233 47.619 0.00 0.00 0.00 4.49
4595 5365 0.994995 GCTCAGACATGTACACGCAG 59.005 55.000 0.00 0.00 0.00 5.18
4621 5391 7.231722 GGCTTACTACCTAGAGAATCATTCTGA 59.768 40.741 4.06 0.00 40.87 3.27
4633 5403 9.745018 AGAGAATCATTCTGATGTTTCCTTTTA 57.255 29.630 4.06 0.00 40.47 1.52
4695 5593 6.422223 CGTAATGGCTTGTGATTAATCTCAC 58.578 40.000 17.52 10.35 44.70 3.51
4719 5617 4.199310 CACCACTGGGAAATACACCATAG 58.801 47.826 0.00 0.00 35.93 2.23
4736 5634 8.685838 ACACCATAGTTACATAGTTTGTTGTT 57.314 30.769 0.00 0.00 39.87 2.83
4791 5690 2.785477 GCATCGCAATGTTTACATGCTC 59.215 45.455 0.00 0.27 36.56 4.26
4807 5706 5.888105 ACATGCTCAACTGCTTATTCATTC 58.112 37.500 0.00 0.00 0.00 2.67
4816 5715 5.509498 ACTGCTTATTCATTCCTTTGGCTA 58.491 37.500 0.00 0.00 0.00 3.93
4821 5720 3.366052 TTCATTCCTTTGGCTAGGGAC 57.634 47.619 0.00 0.00 35.90 4.46
4828 5727 2.558359 CCTTTGGCTAGGGACTTGTTTG 59.442 50.000 0.00 0.00 41.75 2.93
4830 5729 1.145571 TGGCTAGGGACTTGTTTGGT 58.854 50.000 0.00 0.00 41.75 3.67
4848 5747 1.457346 GTTCTTGATGCCCTGGTCAG 58.543 55.000 0.00 0.00 0.00 3.51
4871 5770 5.872070 AGTTTTGCTTCTAGAAGGAGAATCG 59.128 40.000 29.22 7.11 39.87 3.34
4872 5771 4.392921 TTGCTTCTAGAAGGAGAATCGG 57.607 45.455 29.22 6.44 39.87 4.18
4873 5772 3.632333 TGCTTCTAGAAGGAGAATCGGA 58.368 45.455 29.22 4.60 38.80 4.55
4874 5773 4.219115 TGCTTCTAGAAGGAGAATCGGAT 58.781 43.478 29.22 0.00 38.80 4.18
4875 5774 4.651503 TGCTTCTAGAAGGAGAATCGGATT 59.348 41.667 29.22 2.19 38.80 3.01
4876 5775 5.221342 TGCTTCTAGAAGGAGAATCGGATTC 60.221 44.000 29.22 20.48 38.80 2.52
4877 5776 5.440234 TTCTAGAAGGAGAATCGGATTCG 57.560 43.478 21.48 8.01 43.92 3.34
4895 5794 1.165270 CGGATTCCAACAACTGTCCC 58.835 55.000 3.09 0.00 0.00 4.46
4896 5795 1.544537 CGGATTCCAACAACTGTCCCA 60.545 52.381 3.09 0.00 0.00 4.37
4920 5819 6.480524 TCTCGATTGTTAACAAGTCAATGG 57.519 37.500 24.22 10.16 39.47 3.16
4944 5843 5.710567 GGAACTATGTTTAACAAGAAGCCCT 59.289 40.000 0.66 0.00 0.00 5.19
5032 5932 7.807907 GGTTGATACATTAAACAACACTTCCAG 59.192 37.037 0.00 0.00 42.61 3.86
5151 6052 4.644103 ATAAATTGGTGCTGAGCATGTC 57.356 40.909 11.58 4.39 41.91 3.06
5176 6077 4.624024 TCTTTAACTGTATTCCGTTGCTCG 59.376 41.667 0.00 0.00 39.52 5.03
5177 6078 1.076332 AACTGTATTCCGTTGCTCGC 58.924 50.000 0.00 0.00 38.35 5.03
5211 6113 0.950116 AGCTGAAGCAAGCAACAGAC 59.050 50.000 17.69 11.14 46.08 3.51
5289 6218 1.657594 CGCAGACTGATGCAAGTAGTG 59.342 52.381 6.65 1.83 46.87 2.74
5326 6255 0.871722 TGAAACATGCTGCACGTACC 59.128 50.000 3.57 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 2.700371 TCCGATTGATCCAGCAGTATGT 59.300 45.455 0.00 0.00 39.31 2.29
80 81 2.031157 AGGCTTTTGTTGATTCGTTCCG 60.031 45.455 0.00 0.00 0.00 4.30
84 85 1.535462 CCGAGGCTTTTGTTGATTCGT 59.465 47.619 0.00 0.00 0.00 3.85
194 207 2.808906 TCGACTCCTCTCTCATTCCA 57.191 50.000 0.00 0.00 0.00 3.53
211 229 1.193874 GTAACAAGGTGAGGCGTTTCG 59.806 52.381 0.00 0.00 0.00 3.46
214 232 0.601841 CGGTAACAAGGTGAGGCGTT 60.602 55.000 0.00 0.00 0.00 4.84
216 234 0.108329 ATCGGTAACAAGGTGAGGCG 60.108 55.000 0.00 0.00 0.00 5.52
565 584 2.600731 CCCACACCCACAACCTGT 59.399 61.111 0.00 0.00 0.00 4.00
671 690 0.442310 CGACACGCACATACCCTTTG 59.558 55.000 0.00 0.00 0.00 2.77
728 747 1.338973 TGTCAGGGTCACGAAGTACAC 59.661 52.381 0.00 0.00 41.61 2.90
806 825 3.252284 AGCAGGGTGGTGGTCCAG 61.252 66.667 0.00 0.00 45.24 3.86
816 835 1.852157 TGTGGGAATGGAGCAGGGT 60.852 57.895 0.00 0.00 0.00 4.34
821 840 3.134127 GGCGTGTGGGAATGGAGC 61.134 66.667 0.00 0.00 0.00 4.70
829 848 4.742201 CGAGAGGTGGCGTGTGGG 62.742 72.222 0.00 0.00 0.00 4.61
832 851 1.679305 AGATCGAGAGGTGGCGTGT 60.679 57.895 0.00 0.00 0.00 4.49
887 906 2.350895 CAGAATGCGGGTCCCACA 59.649 61.111 9.12 4.54 0.00 4.17
907 926 2.261215 ACGGAAGTACGACCTGTCC 58.739 57.895 9.08 0.00 46.88 4.02
1194 1213 1.202927 CCAATGCGGGGGATCTGTAAT 60.203 52.381 0.00 0.00 0.00 1.89
1371 1390 3.573967 AGAAACCAATCATCACCACAACC 59.426 43.478 0.00 0.00 0.00 3.77
1394 1413 2.896443 CTGAAGGAGAGCGGGGAC 59.104 66.667 0.00 0.00 0.00 4.46
1535 1554 9.905713 ATGATCCAAGTTTAACAGTACATACAT 57.094 29.630 0.00 0.00 0.00 2.29
1536 1555 9.378551 GATGATCCAAGTTTAACAGTACATACA 57.621 33.333 0.00 0.00 0.00 2.29
1537 1556 9.601217 AGATGATCCAAGTTTAACAGTACATAC 57.399 33.333 0.00 0.00 0.00 2.39
1562 1581 1.402968 GTGCATTCAGTACATGGCCAG 59.597 52.381 13.05 6.08 32.52 4.85
1576 1595 4.396166 GCCTATACTTGTCACTTGTGCATT 59.604 41.667 0.00 0.00 0.00 3.56
1614 1633 8.103305 TCCTAAAGCTAAATCATATGATCCCAC 58.897 37.037 18.44 9.17 32.75 4.61
1654 1673 5.355071 CACACCACTGCACAACATTCTATAT 59.645 40.000 0.00 0.00 0.00 0.86
1701 1720 6.598064 CCAGAATAATTACAACCGAGGAACTT 59.402 38.462 0.00 0.00 41.55 2.66
1704 1723 4.879545 GCCAGAATAATTACAACCGAGGAA 59.120 41.667 0.00 0.00 0.00 3.36
1734 1753 0.039798 ACAGCTGCAGAACAATTGCG 60.040 50.000 20.43 0.00 44.40 4.85
1830 1849 3.587951 AGTGACTCCAGTACCTAGACTCA 59.412 47.826 0.00 0.00 0.00 3.41
1858 1877 3.746045 ACAGTAGAAGCCTTCGTTTCA 57.254 42.857 0.00 0.00 32.00 2.69
1883 1902 5.722021 TGAACAGAAGTGCACTACATAGA 57.278 39.130 22.01 0.00 0.00 1.98
1927 1946 4.685924 CAAAACCACTGACAAAGCATTCT 58.314 39.130 0.00 0.00 0.00 2.40
2002 2021 0.469917 CGGGCATATCCTTCACCACT 59.530 55.000 0.00 0.00 34.39 4.00
2008 2027 1.633774 TCTCCTCGGGCATATCCTTC 58.366 55.000 0.00 0.00 34.39 3.46
2114 2133 6.019479 GGTGTCAGAGAAATGTATCGATGTTC 60.019 42.308 8.54 6.52 0.00 3.18
2125 2144 2.189594 TGGCAGGTGTCAGAGAAATG 57.810 50.000 0.00 0.00 0.00 2.32
2217 2236 8.319057 TGGACAGTATGACTAAGATAATTGGT 57.681 34.615 0.00 0.00 39.69 3.67
2218 2237 9.784531 AATGGACAGTATGACTAAGATAATTGG 57.215 33.333 0.00 0.00 39.69 3.16
2234 2253 9.474313 AGCTTGGAAAATAATAAATGGACAGTA 57.526 29.630 0.00 0.00 0.00 2.74
2235 2254 8.366359 AGCTTGGAAAATAATAAATGGACAGT 57.634 30.769 0.00 0.00 0.00 3.55
2248 2267 9.995003 ACAATGAACAAAATAGCTTGGAAAATA 57.005 25.926 0.00 0.00 0.00 1.40
2249 2268 8.907222 ACAATGAACAAAATAGCTTGGAAAAT 57.093 26.923 0.00 0.00 0.00 1.82
2279 2298 6.888632 AGCAGATACAATTCAAGACCTTTGAT 59.111 34.615 0.00 0.00 0.00 2.57
2285 2304 3.944015 AGCAGCAGATACAATTCAAGACC 59.056 43.478 0.00 0.00 0.00 3.85
2290 2309 3.198417 TCCTCAGCAGCAGATACAATTCA 59.802 43.478 0.00 0.00 0.00 2.57
2332 2351 6.342819 TCGGAGGGAGTATTCTATATCCAT 57.657 41.667 0.00 0.00 33.24 3.41
2341 2360 3.827302 TGCTAAGATCGGAGGGAGTATTC 59.173 47.826 0.00 0.00 0.00 1.75
2346 2365 4.221703 ACATTATGCTAAGATCGGAGGGAG 59.778 45.833 0.00 0.00 0.00 4.30
2347 2366 4.160329 ACATTATGCTAAGATCGGAGGGA 58.840 43.478 0.00 0.00 0.00 4.20
2348 2367 4.021104 TGACATTATGCTAAGATCGGAGGG 60.021 45.833 0.00 0.00 0.00 4.30
2349 2368 5.139435 TGACATTATGCTAAGATCGGAGG 57.861 43.478 0.00 0.00 0.00 4.30
2350 2369 6.648310 ACAATGACATTATGCTAAGATCGGAG 59.352 38.462 0.00 0.00 0.00 4.63
2351 2370 6.524734 ACAATGACATTATGCTAAGATCGGA 58.475 36.000 0.00 0.00 0.00 4.55
2352 2371 6.791887 ACAATGACATTATGCTAAGATCGG 57.208 37.500 0.00 0.00 0.00 4.18
2357 2376 8.877779 GCCTCTATACAATGACATTATGCTAAG 58.122 37.037 0.00 0.00 0.00 2.18
2358 2377 8.597167 AGCCTCTATACAATGACATTATGCTAA 58.403 33.333 0.00 0.00 0.00 3.09
2359 2378 8.037166 CAGCCTCTATACAATGACATTATGCTA 58.963 37.037 0.00 0.00 0.00 3.49
2360 2379 6.877855 CAGCCTCTATACAATGACATTATGCT 59.122 38.462 0.00 0.00 0.00 3.79
2361 2380 6.402983 GCAGCCTCTATACAATGACATTATGC 60.403 42.308 0.00 0.00 0.00 3.14
2362 2381 6.652062 TGCAGCCTCTATACAATGACATTATG 59.348 38.462 0.00 0.00 0.00 1.90
2363 2382 6.772605 TGCAGCCTCTATACAATGACATTAT 58.227 36.000 0.00 0.00 0.00 1.28
2364 2383 6.173427 TGCAGCCTCTATACAATGACATTA 57.827 37.500 0.00 0.00 0.00 1.90
2365 2384 5.039920 TGCAGCCTCTATACAATGACATT 57.960 39.130 0.00 0.00 0.00 2.71
2366 2385 4.694760 TGCAGCCTCTATACAATGACAT 57.305 40.909 0.00 0.00 0.00 3.06
2367 2386 4.101430 TGATGCAGCCTCTATACAATGACA 59.899 41.667 0.00 0.00 0.00 3.58
2368 2387 4.635223 TGATGCAGCCTCTATACAATGAC 58.365 43.478 0.00 0.00 0.00 3.06
2369 2388 4.961438 TGATGCAGCCTCTATACAATGA 57.039 40.909 0.00 0.00 0.00 2.57
2370 2389 6.570672 AATTGATGCAGCCTCTATACAATG 57.429 37.500 0.00 0.00 0.00 2.82
2371 2390 8.874744 ATTAATTGATGCAGCCTCTATACAAT 57.125 30.769 0.00 0.00 0.00 2.71
2372 2391 8.696043 AATTAATTGATGCAGCCTCTATACAA 57.304 30.769 0.00 0.00 0.00 2.41
2373 2392 7.118245 CGAATTAATTGATGCAGCCTCTATACA 59.882 37.037 5.17 0.00 0.00 2.29
2374 2393 7.413438 CCGAATTAATTGATGCAGCCTCTATAC 60.413 40.741 5.17 0.00 0.00 1.47
2375 2394 6.595326 CCGAATTAATTGATGCAGCCTCTATA 59.405 38.462 5.17 0.00 0.00 1.31
2376 2395 5.413833 CCGAATTAATTGATGCAGCCTCTAT 59.586 40.000 5.17 0.00 0.00 1.98
2377 2396 4.756642 CCGAATTAATTGATGCAGCCTCTA 59.243 41.667 5.17 0.00 0.00 2.43
2378 2397 3.567164 CCGAATTAATTGATGCAGCCTCT 59.433 43.478 5.17 0.00 0.00 3.69
2379 2398 3.565482 TCCGAATTAATTGATGCAGCCTC 59.435 43.478 5.17 0.00 0.00 4.70
2380 2399 3.554934 TCCGAATTAATTGATGCAGCCT 58.445 40.909 5.17 0.00 0.00 4.58
2381 2400 3.988379 TCCGAATTAATTGATGCAGCC 57.012 42.857 5.17 0.00 0.00 4.85
2382 2401 4.153986 CGATCCGAATTAATTGATGCAGC 58.846 43.478 5.17 0.00 0.00 5.25
2383 2402 4.452114 TCCGATCCGAATTAATTGATGCAG 59.548 41.667 5.17 0.00 0.00 4.41
2384 2403 4.384940 TCCGATCCGAATTAATTGATGCA 58.615 39.130 5.17 0.00 0.00 3.96
2385 2404 4.142816 CCTCCGATCCGAATTAATTGATGC 60.143 45.833 5.17 0.00 0.00 3.91
2386 2405 4.393062 CCCTCCGATCCGAATTAATTGATG 59.607 45.833 5.17 0.00 0.00 3.07
2387 2406 4.286032 TCCCTCCGATCCGAATTAATTGAT 59.714 41.667 5.17 3.10 0.00 2.57
2388 2407 3.644265 TCCCTCCGATCCGAATTAATTGA 59.356 43.478 5.17 0.00 0.00 2.57
2389 2408 3.997021 CTCCCTCCGATCCGAATTAATTG 59.003 47.826 5.17 0.00 0.00 2.32
2390 2409 3.646637 ACTCCCTCCGATCCGAATTAATT 59.353 43.478 0.00 0.00 0.00 1.40
2391 2410 3.240302 ACTCCCTCCGATCCGAATTAAT 58.760 45.455 0.00 0.00 0.00 1.40
2392 2411 2.674420 ACTCCCTCCGATCCGAATTAA 58.326 47.619 0.00 0.00 0.00 1.40
2393 2412 2.376695 ACTCCCTCCGATCCGAATTA 57.623 50.000 0.00 0.00 0.00 1.40
2394 2413 1.962100 GTACTCCCTCCGATCCGAATT 59.038 52.381 0.00 0.00 0.00 2.17
2395 2414 1.145325 AGTACTCCCTCCGATCCGAAT 59.855 52.381 0.00 0.00 0.00 3.34
2396 2415 0.549950 AGTACTCCCTCCGATCCGAA 59.450 55.000 0.00 0.00 0.00 4.30
2397 2416 1.427809 TAGTACTCCCTCCGATCCGA 58.572 55.000 0.00 0.00 0.00 4.55
2398 2417 2.152830 CTTAGTACTCCCTCCGATCCG 58.847 57.143 0.00 0.00 0.00 4.18
2399 2418 2.516906 CCTTAGTACTCCCTCCGATCC 58.483 57.143 0.00 0.00 0.00 3.36
2400 2419 1.887854 GCCTTAGTACTCCCTCCGATC 59.112 57.143 0.00 0.00 0.00 3.69
2401 2420 1.499870 AGCCTTAGTACTCCCTCCGAT 59.500 52.381 0.00 0.00 0.00 4.18
2402 2421 0.924823 AGCCTTAGTACTCCCTCCGA 59.075 55.000 0.00 0.00 0.00 4.55
2403 2422 1.033574 CAGCCTTAGTACTCCCTCCG 58.966 60.000 0.00 0.00 0.00 4.63
2404 2423 1.415200 CCAGCCTTAGTACTCCCTCC 58.585 60.000 0.00 0.00 0.00 4.30
2405 2424 0.753867 GCCAGCCTTAGTACTCCCTC 59.246 60.000 0.00 0.00 0.00 4.30
2406 2425 1.043673 CGCCAGCCTTAGTACTCCCT 61.044 60.000 0.00 0.00 0.00 4.20
2407 2426 1.041447 TCGCCAGCCTTAGTACTCCC 61.041 60.000 0.00 0.00 0.00 4.30
2408 2427 1.041437 ATCGCCAGCCTTAGTACTCC 58.959 55.000 0.00 0.00 0.00 3.85
2409 2428 1.681793 TCATCGCCAGCCTTAGTACTC 59.318 52.381 0.00 0.00 0.00 2.59
2410 2429 1.776662 TCATCGCCAGCCTTAGTACT 58.223 50.000 0.00 0.00 0.00 2.73
2411 2430 2.159085 ACTTCATCGCCAGCCTTAGTAC 60.159 50.000 0.00 0.00 0.00 2.73
2412 2431 2.108168 ACTTCATCGCCAGCCTTAGTA 58.892 47.619 0.00 0.00 0.00 1.82
2413 2432 0.905357 ACTTCATCGCCAGCCTTAGT 59.095 50.000 0.00 0.00 0.00 2.24
2414 2433 1.936547 GAACTTCATCGCCAGCCTTAG 59.063 52.381 0.00 0.00 0.00 2.18
2445 2464 6.202954 CGTGCCCTCGAAAGATATAAGAATTT 59.797 38.462 0.00 0.00 40.84 1.82
2453 2472 5.652891 AGATATACGTGCCCTCGAAAGATAT 59.347 40.000 0.00 0.00 40.84 1.63
2455 2474 3.827302 AGATATACGTGCCCTCGAAAGAT 59.173 43.478 0.00 0.00 40.84 2.40
2523 2542 8.951614 AGGAACACCTACTACTGCAATATATA 57.048 34.615 0.00 0.00 31.52 0.86
2524 2543 7.857404 AGGAACACCTACTACTGCAATATAT 57.143 36.000 0.00 0.00 31.52 0.86
2525 2544 7.125204 ACAAGGAACACCTACTACTGCAATATA 59.875 37.037 0.00 0.00 33.17 0.86
2542 2563 4.631377 CGAATCTGCTTCATACAAGGAACA 59.369 41.667 0.00 0.00 33.10 3.18
2565 2589 2.816087 AGAATGCAGTCAATGACACCAC 59.184 45.455 17.53 2.38 34.60 4.16
2566 2590 3.144657 AGAATGCAGTCAATGACACCA 57.855 42.857 17.53 11.74 34.60 4.17
2567 2591 5.182001 ACTTAAGAATGCAGTCAATGACACC 59.818 40.000 17.53 6.28 34.60 4.16
2568 2592 6.246420 ACTTAAGAATGCAGTCAATGACAC 57.754 37.500 17.53 7.76 34.60 3.67
2569 2593 6.294120 CCAACTTAAGAATGCAGTCAATGACA 60.294 38.462 17.53 0.00 34.60 3.58
2570 2594 6.088824 CCAACTTAAGAATGCAGTCAATGAC 58.911 40.000 17.53 5.02 0.00 3.06
2571 2595 5.335897 GCCAACTTAAGAATGCAGTCAATGA 60.336 40.000 17.53 0.71 0.00 2.57
2572 2596 4.860907 GCCAACTTAAGAATGCAGTCAATG 59.139 41.667 17.53 8.61 0.00 2.82
2573 2597 4.523943 TGCCAACTTAAGAATGCAGTCAAT 59.476 37.500 17.53 7.31 0.00 2.57
2574 2598 3.888323 TGCCAACTTAAGAATGCAGTCAA 59.112 39.130 17.53 1.68 0.00 3.18
2575 2599 3.485394 TGCCAACTTAAGAATGCAGTCA 58.515 40.909 17.53 0.00 0.00 3.41
2576 2600 4.708726 ATGCCAACTTAAGAATGCAGTC 57.291 40.909 10.09 5.91 31.53 3.51
2577 2601 5.009631 TGTATGCCAACTTAAGAATGCAGT 58.990 37.500 10.09 0.00 31.53 4.40
2578 2602 5.565592 TGTATGCCAACTTAAGAATGCAG 57.434 39.130 10.09 0.00 31.53 4.41
2579 2603 5.651576 TCATGTATGCCAACTTAAGAATGCA 59.348 36.000 10.09 13.77 0.00 3.96
2580 2604 6.038603 TCTCATGTATGCCAACTTAAGAATGC 59.961 38.462 10.09 8.52 0.00 3.56
2581 2605 7.066163 TGTCTCATGTATGCCAACTTAAGAATG 59.934 37.037 10.09 7.69 0.00 2.67
2582 2606 7.112122 TGTCTCATGTATGCCAACTTAAGAAT 58.888 34.615 10.09 0.00 0.00 2.40
2583 2607 6.472016 TGTCTCATGTATGCCAACTTAAGAA 58.528 36.000 10.09 0.00 0.00 2.52
2584 2608 6.048732 TGTCTCATGTATGCCAACTTAAGA 57.951 37.500 10.09 0.00 0.00 2.10
2585 2609 6.932356 ATGTCTCATGTATGCCAACTTAAG 57.068 37.500 0.00 0.00 0.00 1.85
2586 2610 7.564793 ACTATGTCTCATGTATGCCAACTTAA 58.435 34.615 0.00 0.00 0.00 1.85
2587 2611 7.124573 ACTATGTCTCATGTATGCCAACTTA 57.875 36.000 0.00 0.00 0.00 2.24
2588 2612 5.994250 ACTATGTCTCATGTATGCCAACTT 58.006 37.500 0.00 0.00 0.00 2.66
2589 2613 5.620738 ACTATGTCTCATGTATGCCAACT 57.379 39.130 0.00 0.00 0.00 3.16
2590 2614 7.154656 TGATACTATGTCTCATGTATGCCAAC 58.845 38.462 0.00 0.00 0.00 3.77
2591 2615 7.301868 TGATACTATGTCTCATGTATGCCAA 57.698 36.000 0.00 0.00 0.00 4.52
2592 2616 6.916360 TGATACTATGTCTCATGTATGCCA 57.084 37.500 0.00 0.00 0.00 4.92
2593 2617 7.550712 TGATGATACTATGTCTCATGTATGCC 58.449 38.462 3.83 0.00 31.22 4.40
2594 2618 8.992835 TTGATGATACTATGTCTCATGTATGC 57.007 34.615 3.83 0.00 31.22 3.14
2595 2619 9.085250 GCTTGATGATACTATGTCTCATGTATG 57.915 37.037 3.83 0.00 31.22 2.39
2596 2620 8.810041 TGCTTGATGATACTATGTCTCATGTAT 58.190 33.333 3.83 0.00 31.22 2.29
2597 2621 8.181904 TGCTTGATGATACTATGTCTCATGTA 57.818 34.615 3.83 0.00 31.22 2.29
2598 2622 7.059202 TGCTTGATGATACTATGTCTCATGT 57.941 36.000 3.83 0.00 31.22 3.21
2644 2668 8.279800 CACATCTAAACAAAGACAAATACGACA 58.720 33.333 0.00 0.00 0.00 4.35
2654 2678 8.015658 GGTTACATCACACATCTAAACAAAGAC 58.984 37.037 0.00 0.00 0.00 3.01
2656 2680 7.870826 TGGTTACATCACACATCTAAACAAAG 58.129 34.615 0.00 0.00 0.00 2.77
2670 2694 7.224557 GGGAAATAATTTGCATGGTTACATCAC 59.775 37.037 0.00 0.00 34.35 3.06
2675 2699 6.639563 ACAGGGAAATAATTTGCATGGTTAC 58.360 36.000 0.00 0.00 45.16 2.50
2712 2736 3.318839 CACTCCCAATTTGCACTGAGAAA 59.681 43.478 0.00 0.00 0.00 2.52
2754 2781 2.850060 TCGTACAACAGAATCGCGATTC 59.150 45.455 41.15 41.15 45.66 2.52
2755 2782 2.871133 TCGTACAACAGAATCGCGATT 58.129 42.857 32.97 32.97 0.00 3.34
2756 2783 2.554806 TCGTACAACAGAATCGCGAT 57.445 45.000 17.62 17.62 0.00 4.58
2757 2784 2.554806 ATCGTACAACAGAATCGCGA 57.445 45.000 13.09 13.09 0.00 5.87
2758 2785 2.852413 AGAATCGTACAACAGAATCGCG 59.148 45.455 0.00 0.00 0.00 5.87
2759 2786 4.086227 CGTAGAATCGTACAACAGAATCGC 60.086 45.833 0.00 0.00 0.00 4.58
2760 2787 5.169208 GTCGTAGAATCGTACAACAGAATCG 59.831 44.000 0.00 0.00 39.69 3.34
2761 2788 6.256686 AGTCGTAGAATCGTACAACAGAATC 58.743 40.000 0.00 0.00 39.69 2.52
2762 2789 6.192234 AGTCGTAGAATCGTACAACAGAAT 57.808 37.500 0.00 0.00 39.69 2.40
2763 2790 5.618056 AGTCGTAGAATCGTACAACAGAA 57.382 39.130 0.00 0.00 39.69 3.02
2764 2791 5.179929 TCAAGTCGTAGAATCGTACAACAGA 59.820 40.000 0.00 0.00 39.69 3.41
2765 2792 5.283247 GTCAAGTCGTAGAATCGTACAACAG 59.717 44.000 0.00 0.00 39.69 3.16
2766 2793 5.149273 GTCAAGTCGTAGAATCGTACAACA 58.851 41.667 0.00 0.00 39.69 3.33
2767 2794 5.149273 TGTCAAGTCGTAGAATCGTACAAC 58.851 41.667 0.00 0.00 39.69 3.32
2768 2795 5.361135 TGTCAAGTCGTAGAATCGTACAA 57.639 39.130 0.00 0.00 39.69 2.41
2769 2796 5.361135 TTGTCAAGTCGTAGAATCGTACA 57.639 39.130 0.00 0.00 39.69 2.90
2770 2797 5.454877 GGATTGTCAAGTCGTAGAATCGTAC 59.545 44.000 0.00 0.00 39.69 3.67
2771 2798 5.124297 TGGATTGTCAAGTCGTAGAATCGTA 59.876 40.000 0.00 0.00 39.69 3.43
2772 2799 4.082408 TGGATTGTCAAGTCGTAGAATCGT 60.082 41.667 0.00 0.00 39.69 3.73
2773 2800 4.421058 TGGATTGTCAAGTCGTAGAATCG 58.579 43.478 0.00 0.00 39.69 3.34
2774 2801 6.369065 AGTTTGGATTGTCAAGTCGTAGAATC 59.631 38.462 0.00 0.00 39.69 2.52
2775 2802 6.231211 AGTTTGGATTGTCAAGTCGTAGAAT 58.769 36.000 0.00 0.00 39.69 2.40
2776 2803 5.607477 AGTTTGGATTGTCAAGTCGTAGAA 58.393 37.500 0.00 0.00 39.69 2.10
2777 2804 5.209818 AGTTTGGATTGTCAAGTCGTAGA 57.790 39.130 0.00 0.00 0.00 2.59
2778 2805 6.645415 AGTTAGTTTGGATTGTCAAGTCGTAG 59.355 38.462 0.00 0.00 0.00 3.51
2779 2806 6.518493 AGTTAGTTTGGATTGTCAAGTCGTA 58.482 36.000 0.00 0.00 0.00 3.43
2780 2807 5.365619 AGTTAGTTTGGATTGTCAAGTCGT 58.634 37.500 0.00 0.00 0.00 4.34
2781 2808 5.465390 TGAGTTAGTTTGGATTGTCAAGTCG 59.535 40.000 0.00 0.00 0.00 4.18
2782 2809 6.861065 TGAGTTAGTTTGGATTGTCAAGTC 57.139 37.500 0.00 0.00 0.00 3.01
2783 2810 6.998074 TCATGAGTTAGTTTGGATTGTCAAGT 59.002 34.615 0.00 0.00 0.00 3.16
2784 2811 7.439157 TCATGAGTTAGTTTGGATTGTCAAG 57.561 36.000 0.00 0.00 0.00 3.02
2785 2812 8.408043 AATCATGAGTTAGTTTGGATTGTCAA 57.592 30.769 0.09 0.00 0.00 3.18
2786 2813 7.884877 AGAATCATGAGTTAGTTTGGATTGTCA 59.115 33.333 0.09 0.00 0.00 3.58
2787 2814 8.273780 AGAATCATGAGTTAGTTTGGATTGTC 57.726 34.615 0.09 0.00 0.00 3.18
2788 2815 9.911788 ATAGAATCATGAGTTAGTTTGGATTGT 57.088 29.630 0.09 0.00 0.00 2.71
2800 2827 8.900781 CCAAACAGAATCATAGAATCATGAGTT 58.099 33.333 0.09 0.00 38.30 3.01
2801 2828 8.051535 ACCAAACAGAATCATAGAATCATGAGT 58.948 33.333 0.09 0.00 38.30 3.41
2802 2829 8.447924 ACCAAACAGAATCATAGAATCATGAG 57.552 34.615 0.09 0.00 38.30 2.90
2803 2830 9.904198 TTACCAAACAGAATCATAGAATCATGA 57.096 29.630 0.00 0.00 39.20 3.07
2818 2845 9.349713 ACAGAAACATAGATTTTACCAAACAGA 57.650 29.630 0.00 0.00 0.00 3.41
2819 2846 9.398170 CACAGAAACATAGATTTTACCAAACAG 57.602 33.333 0.00 0.00 0.00 3.16
2820 2847 9.126151 TCACAGAAACATAGATTTTACCAAACA 57.874 29.630 0.00 0.00 0.00 2.83
2830 2857 9.436957 ACTACGAAAATCACAGAAACATAGATT 57.563 29.630 0.00 0.00 0.00 2.40
2831 2858 8.873830 CACTACGAAAATCACAGAAACATAGAT 58.126 33.333 0.00 0.00 0.00 1.98
2832 2859 8.085909 TCACTACGAAAATCACAGAAACATAGA 58.914 33.333 0.00 0.00 0.00 1.98
2833 2860 8.239681 TCACTACGAAAATCACAGAAACATAG 57.760 34.615 0.00 0.00 0.00 2.23
2834 2861 8.596271 TTCACTACGAAAATCACAGAAACATA 57.404 30.769 0.00 0.00 0.00 2.29
2835 2862 7.441157 TCTTCACTACGAAAATCACAGAAACAT 59.559 33.333 0.00 0.00 31.71 2.71
2836 2863 6.759356 TCTTCACTACGAAAATCACAGAAACA 59.241 34.615 0.00 0.00 31.71 2.83
2837 2864 7.173863 TCTTCACTACGAAAATCACAGAAAC 57.826 36.000 0.00 0.00 31.71 2.78
2838 2865 7.962964 ATCTTCACTACGAAAATCACAGAAA 57.037 32.000 0.00 0.00 31.71 2.52
2839 2866 7.872993 AGAATCTTCACTACGAAAATCACAGAA 59.127 33.333 0.00 0.00 31.71 3.02
2840 2867 7.329471 CAGAATCTTCACTACGAAAATCACAGA 59.671 37.037 0.00 0.00 31.71 3.41
2841 2868 7.451429 CAGAATCTTCACTACGAAAATCACAG 58.549 38.462 0.00 0.00 31.71 3.66
2842 2869 6.128553 GCAGAATCTTCACTACGAAAATCACA 60.129 38.462 0.00 0.00 31.71 3.58
2843 2870 6.244275 GCAGAATCTTCACTACGAAAATCAC 58.756 40.000 0.00 0.00 31.71 3.06
2844 2871 5.062183 CGCAGAATCTTCACTACGAAAATCA 59.938 40.000 0.00 0.00 31.71 2.57
2845 2872 5.288712 TCGCAGAATCTTCACTACGAAAATC 59.711 40.000 0.00 0.00 31.71 2.17
2846 2873 5.168569 TCGCAGAATCTTCACTACGAAAAT 58.831 37.500 0.00 0.00 31.71 1.82
2847 2874 4.552355 TCGCAGAATCTTCACTACGAAAA 58.448 39.130 0.00 0.00 31.71 2.29
2848 2875 4.168922 TCGCAGAATCTTCACTACGAAA 57.831 40.909 0.00 0.00 31.71 3.46
2849 2876 3.842732 TCGCAGAATCTTCACTACGAA 57.157 42.857 0.00 0.00 0.00 3.85
2850 2877 5.452777 CATATCGCAGAATCTTCACTACGA 58.547 41.667 0.00 0.00 43.58 3.43
2851 2878 4.089208 GCATATCGCAGAATCTTCACTACG 59.911 45.833 0.00 0.00 43.58 3.51
2852 2879 4.089208 CGCATATCGCAGAATCTTCACTAC 59.911 45.833 0.00 0.00 43.58 2.73
2853 2880 4.023193 TCGCATATCGCAGAATCTTCACTA 60.023 41.667 0.00 0.00 43.58 2.74
2854 2881 3.055591 CGCATATCGCAGAATCTTCACT 58.944 45.455 0.00 0.00 43.58 3.41
2855 2882 3.052745 TCGCATATCGCAGAATCTTCAC 58.947 45.455 0.00 0.00 43.58 3.18
2856 2883 3.052745 GTCGCATATCGCAGAATCTTCA 58.947 45.455 0.00 0.00 43.58 3.02
2857 2884 2.410053 GGTCGCATATCGCAGAATCTTC 59.590 50.000 0.00 0.00 43.58 2.87
2858 2885 2.408050 GGTCGCATATCGCAGAATCTT 58.592 47.619 0.00 0.00 43.58 2.40
2859 2886 1.337260 GGGTCGCATATCGCAGAATCT 60.337 52.381 0.00 0.00 43.58 2.40
2860 2887 1.071605 GGGTCGCATATCGCAGAATC 58.928 55.000 0.00 0.00 43.58 2.52
2861 2888 0.681733 AGGGTCGCATATCGCAGAAT 59.318 50.000 0.00 0.00 43.58 2.40
2862 2889 1.000607 GTAGGGTCGCATATCGCAGAA 60.001 52.381 0.00 0.00 43.58 3.02
2863 2890 0.596577 GTAGGGTCGCATATCGCAGA 59.403 55.000 0.00 0.00 42.60 4.26
2864 2891 0.388649 GGTAGGGTCGCATATCGCAG 60.389 60.000 0.00 0.00 42.60 5.18
2865 2892 1.110518 TGGTAGGGTCGCATATCGCA 61.111 55.000 0.00 0.00 42.60 5.10
2866 2893 0.246635 ATGGTAGGGTCGCATATCGC 59.753 55.000 0.00 0.00 38.27 4.58
2867 2894 2.743636 AATGGTAGGGTCGCATATCG 57.256 50.000 0.00 0.00 40.15 2.92
2868 2895 4.124851 CCTAATGGTAGGGTCGCATATC 57.875 50.000 0.00 0.00 43.07 1.63
2878 2905 0.840722 ATCGGGGCCCTAATGGTAGG 60.841 60.000 24.38 0.80 45.98 3.18
2879 2906 0.613777 GATCGGGGCCCTAATGGTAG 59.386 60.000 24.38 1.65 36.04 3.18
2880 2907 0.838987 GGATCGGGGCCCTAATGGTA 60.839 60.000 24.38 0.00 36.04 3.25
2881 2908 2.154074 GGATCGGGGCCCTAATGGT 61.154 63.158 24.38 5.42 36.04 3.55
2882 2909 2.757077 GGATCGGGGCCCTAATGG 59.243 66.667 24.38 4.23 37.09 3.16
2883 2910 1.553690 ATCGGATCGGGGCCCTAATG 61.554 60.000 24.38 9.71 0.00 1.90
2884 2911 0.840722 AATCGGATCGGGGCCCTAAT 60.841 55.000 24.38 15.72 0.00 1.73
2885 2912 1.460689 AATCGGATCGGGGCCCTAA 60.461 57.895 24.38 10.82 0.00 2.69
2886 2913 1.911766 GAATCGGATCGGGGCCCTA 60.912 63.158 24.38 10.98 0.00 3.53
2887 2914 3.242291 GAATCGGATCGGGGCCCT 61.242 66.667 24.38 0.00 0.00 5.19
2888 2915 3.537206 CTGAATCGGATCGGGGCCC 62.537 68.421 15.76 15.76 0.00 5.80
2889 2916 2.031163 CTGAATCGGATCGGGGCC 59.969 66.667 0.00 0.00 0.00 5.80
2890 2917 0.035458 ATTCTGAATCGGATCGGGGC 59.965 55.000 0.00 0.00 0.00 5.80
2891 2918 1.344438 TGATTCTGAATCGGATCGGGG 59.656 52.381 21.70 0.00 40.84 5.73
2892 2919 2.408050 GTGATTCTGAATCGGATCGGG 58.592 52.381 21.70 0.00 40.84 5.14
2893 2920 2.054363 CGTGATTCTGAATCGGATCGG 58.946 52.381 21.70 6.77 40.84 4.18
2894 2921 3.000082 TCGTGATTCTGAATCGGATCG 58.000 47.619 21.70 20.73 40.84 3.69
2895 2922 5.508124 GAATCGTGATTCTGAATCGGATC 57.492 43.478 24.56 17.91 42.85 3.36
2906 2933 6.276847 AGGTTGATAGTCAGAATCGTGATTC 58.723 40.000 13.46 13.46 45.66 2.52
2907 2934 6.227298 AGGTTGATAGTCAGAATCGTGATT 57.773 37.500 0.00 0.00 0.00 2.57
2908 2935 5.860941 AGGTTGATAGTCAGAATCGTGAT 57.139 39.130 0.00 0.00 0.00 3.06
2909 2936 5.651530 GAAGGTTGATAGTCAGAATCGTGA 58.348 41.667 0.00 0.00 0.00 4.35
2910 2937 4.500837 CGAAGGTTGATAGTCAGAATCGTG 59.499 45.833 0.00 0.00 0.00 4.35
2911 2938 4.398358 TCGAAGGTTGATAGTCAGAATCGT 59.602 41.667 0.00 0.00 0.00 3.73
2912 2939 4.921547 TCGAAGGTTGATAGTCAGAATCG 58.078 43.478 0.00 0.00 0.00 3.34
2913 2940 7.778470 AATTCGAAGGTTGATAGTCAGAATC 57.222 36.000 3.35 0.00 0.00 2.52
2914 2941 7.066284 CCAAATTCGAAGGTTGATAGTCAGAAT 59.934 37.037 20.38 0.00 0.00 2.40
2915 2942 6.371548 CCAAATTCGAAGGTTGATAGTCAGAA 59.628 38.462 20.38 0.00 0.00 3.02
2916 2943 5.874810 CCAAATTCGAAGGTTGATAGTCAGA 59.125 40.000 20.38 0.00 0.00 3.27
2917 2944 5.447818 GCCAAATTCGAAGGTTGATAGTCAG 60.448 44.000 20.38 7.60 0.00 3.51
2918 2945 4.394920 GCCAAATTCGAAGGTTGATAGTCA 59.605 41.667 20.38 0.00 0.00 3.41
2919 2946 4.394920 TGCCAAATTCGAAGGTTGATAGTC 59.605 41.667 20.38 8.59 0.00 2.59
2920 2947 4.331968 TGCCAAATTCGAAGGTTGATAGT 58.668 39.130 20.38 0.00 0.00 2.12
2921 2948 4.963276 TGCCAAATTCGAAGGTTGATAG 57.037 40.909 20.38 9.20 0.00 2.08
2922 2949 4.439974 GCATGCCAAATTCGAAGGTTGATA 60.440 41.667 20.38 11.87 0.00 2.15
2923 2950 3.676873 GCATGCCAAATTCGAAGGTTGAT 60.677 43.478 20.38 8.54 0.00 2.57
2949 2976 8.086522 TGAGAGTGTACAGTTTTGGATAGTAAC 58.913 37.037 4.32 0.00 0.00 2.50
2952 2979 6.665992 TGAGAGTGTACAGTTTTGGATAGT 57.334 37.500 4.32 0.00 0.00 2.12
3008 3035 0.491371 ATTGCAAAGGGAAAGGGGGA 59.509 50.000 1.71 0.00 0.00 4.81
3026 3053 6.598503 TCCAATTATGTGAGCTCAAGATGAT 58.401 36.000 20.19 12.55 0.00 2.45
3046 3073 5.603596 AGCGTATCGGTGTATTTATTCCAA 58.396 37.500 0.00 0.00 35.85 3.53
3097 3124 5.163693 TGCATTGCATGAACTGACATCTTAG 60.164 40.000 7.38 0.00 31.71 2.18
3105 3132 3.151554 AGTCTTGCATTGCATGAACTGA 58.848 40.909 23.90 9.03 42.66 3.41
3108 3135 4.149396 GTGAAAGTCTTGCATTGCATGAAC 59.851 41.667 23.90 18.22 42.66 3.18
3126 3153 4.363999 CAACAAATTTAGGGCACGTGAAA 58.636 39.130 22.23 11.27 0.00 2.69
3127 3154 3.243569 CCAACAAATTTAGGGCACGTGAA 60.244 43.478 22.23 4.12 0.00 3.18
3128 3155 2.294791 CCAACAAATTTAGGGCACGTGA 59.705 45.455 22.23 0.00 0.00 4.35
3129 3156 2.035321 ACCAACAAATTTAGGGCACGTG 59.965 45.455 12.28 12.28 0.00 4.49
3132 3159 5.203060 TGTAACCAACAAATTTAGGGCAC 57.797 39.130 7.99 0.00 34.29 5.01
3133 3160 5.540337 TCATGTAACCAACAAATTTAGGGCA 59.460 36.000 7.99 5.05 42.70 5.36
3134 3161 5.867174 GTCATGTAACCAACAAATTTAGGGC 59.133 40.000 7.99 0.00 42.70 5.19
3135 3162 7.227049 AGTCATGTAACCAACAAATTTAGGG 57.773 36.000 7.99 4.90 42.70 3.53
3136 3163 8.576442 AGAAGTCATGTAACCAACAAATTTAGG 58.424 33.333 0.00 0.00 42.70 2.69
3140 3167 9.744468 GTAAAGAAGTCATGTAACCAACAAATT 57.256 29.630 0.00 0.00 42.70 1.82
3160 3192 6.488769 TGAAGTGGTTGGAGTTAGTAAAGA 57.511 37.500 0.00 0.00 0.00 2.52
3161 3193 6.934645 TGATGAAGTGGTTGGAGTTAGTAAAG 59.065 38.462 0.00 0.00 0.00 1.85
3162 3194 6.833041 TGATGAAGTGGTTGGAGTTAGTAAA 58.167 36.000 0.00 0.00 0.00 2.01
3177 3209 8.777865 TCAAGATTAGGTAAGTTGATGAAGTG 57.222 34.615 0.00 0.00 0.00 3.16
3181 3213 9.739276 ACAAATCAAGATTAGGTAAGTTGATGA 57.261 29.630 9.36 0.00 35.08 2.92
3188 3958 7.965107 GCAGACAACAAATCAAGATTAGGTAAG 59.035 37.037 0.00 0.00 0.00 2.34
3197 3967 5.125257 TCACAAAGCAGACAACAAATCAAGA 59.875 36.000 0.00 0.00 0.00 3.02
3199 3969 5.321959 TCACAAAGCAGACAACAAATCAA 57.678 34.783 0.00 0.00 0.00 2.57
3224 3994 6.714810 AGCACAAATTTATCAGTAGGTCAACA 59.285 34.615 0.00 0.00 0.00 3.33
3226 3996 6.150976 CCAGCACAAATTTATCAGTAGGTCAA 59.849 38.462 0.00 0.00 0.00 3.18
3260 4030 7.854557 TTCTTGGACTGATGACAATCATTAG 57.145 36.000 8.58 8.58 43.60 1.73
3287 4057 5.584649 TCTTGCGGATTATACCTGTGAAAAG 59.415 40.000 0.00 0.00 0.00 2.27
3289 4059 5.092554 TCTTGCGGATTATACCTGTGAAA 57.907 39.130 0.00 0.00 0.00 2.69
3290 4060 4.746535 TCTTGCGGATTATACCTGTGAA 57.253 40.909 0.00 0.00 0.00 3.18
3291 4061 4.631131 CATCTTGCGGATTATACCTGTGA 58.369 43.478 0.00 0.00 31.27 3.58
3292 4062 3.187227 GCATCTTGCGGATTATACCTGTG 59.813 47.826 0.00 0.00 31.71 3.66
3293 4063 3.403038 GCATCTTGCGGATTATACCTGT 58.597 45.455 0.00 0.00 31.71 4.00
3306 4076 2.751259 TCTCCACAAATCTGCATCTTGC 59.249 45.455 0.00 0.00 45.29 4.01
3314 4084 8.306038 TCAATGGTTTTATTCTCCACAAATCTG 58.694 33.333 0.00 0.00 33.91 2.90
3366 4136 7.585579 AAGAGCTAACTATAGAGGTAACACC 57.414 40.000 6.78 0.00 38.99 4.16
3374 4144 6.481313 TGCATTGCAAAGAGCTAACTATAGAG 59.519 38.462 9.33 0.00 45.94 2.43
3406 4176 7.624360 AAGATATTGCGAGTAACCATGAAAA 57.376 32.000 0.00 0.00 0.00 2.29
3417 4187 8.958119 TTTTAGGTTCATAAGATATTGCGAGT 57.042 30.769 0.00 0.00 0.00 4.18
3426 4196 9.101655 GCAATGCAATTTTTAGGTTCATAAGAT 57.898 29.630 0.00 0.00 31.22 2.40
3427 4197 8.313292 AGCAATGCAATTTTTAGGTTCATAAGA 58.687 29.630 8.35 0.00 31.22 2.10
3428 4198 8.483307 AGCAATGCAATTTTTAGGTTCATAAG 57.517 30.769 8.35 0.00 31.22 1.73
3429 4199 9.935241 TTAGCAATGCAATTTTTAGGTTCATAA 57.065 25.926 8.35 0.00 31.22 1.90
3430 4200 9.364989 GTTAGCAATGCAATTTTTAGGTTCATA 57.635 29.630 8.35 0.00 31.22 2.15
3431 4201 8.096414 AGTTAGCAATGCAATTTTTAGGTTCAT 58.904 29.630 8.35 0.00 31.22 2.57
3432 4202 7.441017 AGTTAGCAATGCAATTTTTAGGTTCA 58.559 30.769 8.35 0.00 31.22 3.18
3433 4203 7.889589 AGTTAGCAATGCAATTTTTAGGTTC 57.110 32.000 8.35 0.00 31.22 3.62
3434 4204 8.675705 AAAGTTAGCAATGCAATTTTTAGGTT 57.324 26.923 8.35 0.00 31.22 3.50
3435 4205 8.675705 AAAAGTTAGCAATGCAATTTTTAGGT 57.324 26.923 8.35 0.00 31.22 3.08
3436 4206 8.992073 AGAAAAGTTAGCAATGCAATTTTTAGG 58.008 29.630 8.35 0.00 31.22 2.69
3441 4211 9.709495 TGAATAGAAAAGTTAGCAATGCAATTT 57.291 25.926 8.35 0.00 31.22 1.82
3442 4212 9.880157 ATGAATAGAAAAGTTAGCAATGCAATT 57.120 25.926 8.35 0.00 36.63 2.32
3443 4213 9.880157 AATGAATAGAAAAGTTAGCAATGCAAT 57.120 25.926 8.35 0.00 0.00 3.56
3444 4214 9.142515 CAATGAATAGAAAAGTTAGCAATGCAA 57.857 29.630 8.35 0.00 0.00 4.08
3445 4215 8.306038 ACAATGAATAGAAAAGTTAGCAATGCA 58.694 29.630 8.35 0.00 0.00 3.96
3446 4216 8.589629 CACAATGAATAGAAAAGTTAGCAATGC 58.410 33.333 0.00 0.00 0.00 3.56
3447 4217 9.630098 ACACAATGAATAGAAAAGTTAGCAATG 57.370 29.630 0.00 0.00 0.00 2.82
3448 4218 9.846248 GACACAATGAATAGAAAAGTTAGCAAT 57.154 29.630 0.00 0.00 0.00 3.56
3449 4219 8.845227 TGACACAATGAATAGAAAAGTTAGCAA 58.155 29.630 0.00 0.00 0.00 3.91
3450 4220 8.389779 TGACACAATGAATAGAAAAGTTAGCA 57.610 30.769 0.00 0.00 0.00 3.49
3451 4221 9.846248 AATGACACAATGAATAGAAAAGTTAGC 57.154 29.630 0.00 0.00 0.00 3.09
3469 4239 5.708877 TCAGCAATCAAATCAATGACACA 57.291 34.783 0.00 0.00 30.82 3.72
3470 4240 7.544566 AGAATTCAGCAATCAAATCAATGACAC 59.455 33.333 8.44 0.00 30.82 3.67
3483 4253 4.510038 ACACACCAAGAATTCAGCAATC 57.490 40.909 8.44 0.00 0.00 2.67
3492 4262 8.878769 GTTTAAAATTGACAACACACCAAGAAT 58.121 29.630 0.00 0.00 0.00 2.40
3497 4267 8.608844 AAAAGTTTAAAATTGACAACACACCA 57.391 26.923 1.03 0.00 0.00 4.17
3505 4275 9.930693 ACCACAGTAAAAAGTTTAAAATTGACA 57.069 25.926 1.03 0.00 0.00 3.58
3521 4291 7.394923 CCCAAGGTGAATAATTACCACAGTAAA 59.605 37.037 16.83 0.00 41.68 2.01
3524 4294 5.222254 ACCCAAGGTGAATAATTACCACAGT 60.222 40.000 16.83 5.61 39.46 3.55
3532 4302 3.011708 AGGCAGACCCAAGGTGAATAATT 59.988 43.478 0.00 0.00 35.25 1.40
3534 4304 1.992557 AGGCAGACCCAAGGTGAATAA 59.007 47.619 0.00 0.00 35.25 1.40
3535 4305 1.668826 AGGCAGACCCAAGGTGAATA 58.331 50.000 0.00 0.00 35.25 1.75
3536 4306 0.779997 AAGGCAGACCCAAGGTGAAT 59.220 50.000 0.00 0.00 35.25 2.57
3537 4307 0.555769 AAAGGCAGACCCAAGGTGAA 59.444 50.000 0.00 0.00 35.25 3.18
3538 4308 0.555769 AAAAGGCAGACCCAAGGTGA 59.444 50.000 0.00 0.00 35.25 4.02
3539 4309 0.961753 GAAAAGGCAGACCCAAGGTG 59.038 55.000 0.00 0.00 35.25 4.00
3540 4310 0.178961 GGAAAAGGCAGACCCAAGGT 60.179 55.000 0.00 0.00 39.44 3.50
3541 4311 0.900182 GGGAAAAGGCAGACCCAAGG 60.900 60.000 0.00 0.00 41.72 3.61
3542 4312 0.900182 GGGGAAAAGGCAGACCCAAG 60.900 60.000 0.00 0.00 43.67 3.61
3543 4313 1.155155 GGGGAAAAGGCAGACCCAA 59.845 57.895 0.00 0.00 43.67 4.12
3544 4314 2.851045 GGGGAAAAGGCAGACCCA 59.149 61.111 0.00 0.00 43.67 4.51
3545 4315 0.972471 CATGGGGAAAAGGCAGACCC 60.972 60.000 0.00 0.00 41.84 4.46
3546 4316 1.607801 GCATGGGGAAAAGGCAGACC 61.608 60.000 0.00 0.00 0.00 3.85
3547 4317 0.613012 AGCATGGGGAAAAGGCAGAC 60.613 55.000 0.00 0.00 0.00 3.51
3548 4318 0.612732 CAGCATGGGGAAAAGGCAGA 60.613 55.000 0.00 0.00 0.00 4.26
3558 4328 2.025605 AGGCATATACATCAGCATGGGG 60.026 50.000 0.00 0.00 36.16 4.96
3587 4357 2.301009 TCGCATGTGCTGGATATCTGAT 59.699 45.455 0.00 0.00 39.32 2.90
3599 4369 1.978782 GTAACAAGCTTTCGCATGTGC 59.021 47.619 0.00 0.00 46.28 4.57
3644 4414 3.243201 GCTTCCACCTTCTTGTTCAACTG 60.243 47.826 0.00 0.00 0.00 3.16
3792 4562 1.236616 CCCACGTGCAGCTTCAATCA 61.237 55.000 10.91 0.00 0.00 2.57
3830 4600 0.251354 AGACGAGCAGCATCACCAAT 59.749 50.000 0.00 0.00 0.00 3.16
3846 4616 1.004918 CCACGGTTCCTCCACAGAC 60.005 63.158 0.00 0.00 35.57 3.51
3889 4659 3.065925 GTGCTTGGAGGATAAATGCTGTC 59.934 47.826 0.00 0.00 0.00 3.51
3973 4743 2.961526 TGTAGATCGAAGTGAAGCCC 57.038 50.000 0.00 0.00 0.00 5.19
4012 4782 5.596836 AATCTTCATGAGTCAGGAGAGAC 57.403 43.478 16.46 0.00 38.81 3.36
4042 4812 1.461897 GCTTTTGTGTTGCCATGCATC 59.538 47.619 0.00 0.00 38.76 3.91
4069 4839 5.061064 GCTGTTGACTGAAACATAGTAGTCG 59.939 44.000 0.00 0.00 41.78 4.18
4111 4881 9.887862 ACCATCTTATCCATATTTCCAAAGAAT 57.112 29.630 0.00 0.00 0.00 2.40
4204 4974 1.446792 CAGTCCAGCAGCCGTGTAG 60.447 63.158 0.00 0.00 0.00 2.74
4261 5031 4.290093 TCCCCATGATATAATCCTCTCGG 58.710 47.826 0.00 0.00 0.00 4.63
4312 5082 7.908827 TTTGTACTACAACTTGAACTCACAA 57.091 32.000 0.82 0.00 37.90 3.33
4331 5101 6.545666 CCTTGTGTTATATGGGCTCATTTGTA 59.454 38.462 3.29 0.00 34.96 2.41
4368 5138 0.322997 TACCAATTGGAAGGTGGCCG 60.323 55.000 31.22 0.28 38.87 6.13
4369 5139 1.474330 CTACCAATTGGAAGGTGGCC 58.526 55.000 31.22 0.00 38.87 5.36
4390 5160 4.060900 CAGCCACAATGCGATCTATTAGT 58.939 43.478 0.00 0.00 36.02 2.24
4434 5204 5.649395 CAGTTTCTTCTGAAGATTGGGCATA 59.351 40.000 19.93 0.77 37.38 3.14
4488 5258 5.824624 TGATAATTGCTCCCTGAATCAAGAC 59.175 40.000 0.00 0.00 0.00 3.01
4557 5327 2.952978 AGCTACTATCTGAACTCACCGG 59.047 50.000 0.00 0.00 0.00 5.28
4592 5362 4.585162 TGATTCTCTAGGTAGTAAGCCTGC 59.415 45.833 0.00 0.00 37.54 4.85
4595 5365 7.231722 TCAGAATGATTCTCTAGGTAGTAAGCC 59.768 40.741 4.39 0.00 42.56 4.35
4633 5403 3.490348 GCCTGGCAATATATCCAGTTGT 58.510 45.455 15.17 0.00 46.43 3.32
4671 5569 6.603237 TGAGATTAATCACAAGCCATTACG 57.397 37.500 17.56 0.00 0.00 3.18
4719 5617 7.095816 GCCCAATTCAACAACAAACTATGTAAC 60.096 37.037 0.00 0.00 42.99 2.50
4736 5634 1.409521 CCGGTTATGGAGCCCAATTCA 60.410 52.381 0.00 0.00 36.95 2.57
4791 5690 4.866486 GCCAAAGGAATGAATAAGCAGTTG 59.134 41.667 0.00 0.00 0.00 3.16
4807 5706 2.558359 CAAACAAGTCCCTAGCCAAAGG 59.442 50.000 0.00 0.00 36.30 3.11
4816 5715 3.662759 TCAAGAACCAAACAAGTCCCT 57.337 42.857 0.00 0.00 0.00 4.20
4821 5720 2.629617 AGGGCATCAAGAACCAAACAAG 59.370 45.455 0.00 0.00 0.00 3.16
4828 5727 0.038166 TGACCAGGGCATCAAGAACC 59.962 55.000 0.00 0.00 0.00 3.62
4830 5729 1.067295 ACTGACCAGGGCATCAAGAA 58.933 50.000 0.00 0.00 0.00 2.52
4848 5747 5.064071 CCGATTCTCCTTCTAGAAGCAAAAC 59.936 44.000 24.58 15.07 40.99 2.43
4871 5770 3.081804 ACAGTTGTTGGAATCCGAATCC 58.918 45.455 0.00 0.00 37.48 3.01
4872 5771 3.127030 GGACAGTTGTTGGAATCCGAATC 59.873 47.826 0.00 0.00 0.00 2.52
4873 5772 3.081804 GGACAGTTGTTGGAATCCGAAT 58.918 45.455 0.00 0.00 0.00 3.34
4874 5773 2.500229 GGACAGTTGTTGGAATCCGAA 58.500 47.619 0.00 0.00 0.00 4.30
4875 5774 1.271163 GGGACAGTTGTTGGAATCCGA 60.271 52.381 0.00 0.00 0.00 4.55
4876 5775 1.165270 GGGACAGTTGTTGGAATCCG 58.835 55.000 0.00 0.00 0.00 4.18
4877 5776 2.286365 TGGGACAGTTGTTGGAATCC 57.714 50.000 0.00 0.00 0.00 3.01
4895 5794 6.963242 CCATTGACTTGTTAACAATCGAGATG 59.037 38.462 20.83 18.18 35.02 2.90
4896 5795 6.094048 CCCATTGACTTGTTAACAATCGAGAT 59.906 38.462 20.83 9.33 35.02 2.75
4920 5819 5.710567 AGGGCTTCTTGTTAAACATAGTTCC 59.289 40.000 0.00 0.00 0.00 3.62
5032 5932 1.064060 GACGAATATGGCCTGTGCAAC 59.936 52.381 3.32 0.00 40.13 4.17
5151 6052 6.422776 AGCAACGGAATACAGTTAAAGATG 57.577 37.500 0.00 0.00 33.56 2.90
5211 6113 2.550606 CTCTCGAGAGGTTATCCTTCCG 59.449 54.545 31.01 4.88 45.24 4.30
5248 6177 4.495679 GCGTATTTGAAAAGGCGATGATGA 60.496 41.667 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.