Multiple sequence alignment - TraesCS7A01G261800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G261800 chr7A 100.000 5370 0 0 1 5370 257124093 257129462 0.000000e+00 9917.0
1 TraesCS7A01G261800 chr7A 91.388 209 17 1 5087 5294 42662024 42661816 8.800000e-73 285.0
2 TraesCS7A01G261800 chr7A 89.815 216 16 3 3 212 7143933 7143718 6.850000e-69 272.0
3 TraesCS7A01G261800 chr7B 92.550 4859 246 37 239 5046 216939987 216935194 0.000000e+00 6861.0
4 TraesCS7A01G261800 chr7B 88.073 109 11 2 1891 1998 513654203 513654310 1.570000e-25 128.0
5 TraesCS7A01G261800 chr7D 91.961 3458 168 23 1645 5046 241189662 241186259 0.000000e+00 4745.0
6 TraesCS7A01G261800 chr7D 95.297 1297 46 7 263 1550 241190967 241189677 0.000000e+00 2043.0
7 TraesCS7A01G261800 chr7D 96.617 266 9 0 263 528 241191359 241191094 4.940000e-120 442.0
8 TraesCS7A01G261800 chr7D 92.308 208 15 1 5088 5294 634720607 634720814 1.460000e-75 294.0
9 TraesCS7A01G261800 chr7D 87.387 222 17 7 3 215 54180297 54180516 1.490000e-60 244.0
10 TraesCS7A01G261800 chr3B 92.823 209 14 1 5087 5294 683031404 683031196 8.740000e-78 302.0
11 TraesCS7A01G261800 chr3B 92.344 209 15 1 5087 5294 463229792 463230000 4.070000e-76 296.0
12 TraesCS7A01G261800 chr3B 96.875 32 1 0 2587 2618 581132829 581132860 3.000000e-03 54.7
13 TraesCS7A01G261800 chr6B 91.905 210 15 2 5087 5294 444745057 444745266 5.260000e-75 292.0
14 TraesCS7A01G261800 chr6B 86.486 111 15 0 1888 1998 344040841 344040951 7.300000e-24 122.0
15 TraesCS7A01G261800 chr6B 92.157 51 2 2 2570 2618 44247292 44247242 2.680000e-08 71.3
16 TraesCS7A01G261800 chr4A 91.866 209 16 1 5087 5294 456462693 456462485 1.890000e-74 291.0
17 TraesCS7A01G261800 chr3A 91.866 209 16 1 5087 5294 737270212 737270004 1.890000e-74 291.0
18 TraesCS7A01G261800 chr3A 88.341 223 17 9 3 216 742377366 742377144 5.340000e-65 259.0
19 TraesCS7A01G261800 chr3A 85.354 198 22 7 2283 2476 340284764 340284570 1.180000e-46 198.0
20 TraesCS7A01G261800 chr5A 91.388 209 17 1 5087 5294 674078123 674077915 8.800000e-73 285.0
21 TraesCS7A01G261800 chr5A 93.023 43 3 0 2575 2617 485605148 485605106 4.490000e-06 63.9
22 TraesCS7A01G261800 chr2B 91.388 209 17 1 5087 5294 575179818 575180026 8.800000e-73 285.0
23 TraesCS7A01G261800 chr2B 83.417 199 31 2 2279 2476 458243918 458243721 3.300000e-42 183.0
24 TraesCS7A01G261800 chr2B 83.854 192 29 2 2285 2475 442571318 442571128 1.190000e-41 182.0
25 TraesCS7A01G261800 chr2B 86.957 115 13 2 1891 2003 449674802 449674688 1.570000e-25 128.0
26 TraesCS7A01G261800 chr2B 92.857 42 3 0 2576 2617 47735768 47735809 1.610000e-05 62.1
27 TraesCS7A01G261800 chr2B 92.857 42 3 0 2576 2617 47763657 47763698 1.610000e-05 62.1
28 TraesCS7A01G261800 chr2B 92.857 42 3 0 2576 2617 47807794 47807835 1.610000e-05 62.1
29 TraesCS7A01G261800 chr2A 89.720 214 19 2 6 216 698123371 698123158 2.460000e-68 270.0
30 TraesCS7A01G261800 chr2A 89.140 221 16 7 3 216 38785605 38785824 8.870000e-68 268.0
31 TraesCS7A01G261800 chr2A 85.641 195 27 1 2283 2476 523864589 523864395 2.540000e-48 204.0
32 TraesCS7A01G261800 chr2A 100.000 30 0 0 5324 5353 540261079 540261108 7.510000e-04 56.5
33 TraesCS7A01G261800 chr2D 88.940 217 18 6 3 213 161896294 161896510 4.120000e-66 263.0
34 TraesCS7A01G261800 chr2D 88.341 223 16 4 3 218 131316272 131316491 5.340000e-65 259.0
35 TraesCS7A01G261800 chr2D 83.077 195 32 1 2283 2476 387187885 387187691 5.530000e-40 176.0
36 TraesCS7A01G261800 chr1A 88.785 214 19 4 3 213 547825242 547825453 1.920000e-64 257.0
37 TraesCS7A01G261800 chr1A 88.496 113 13 0 1892 2004 352174199 352174087 2.610000e-28 137.0
38 TraesCS7A01G261800 chr1D 87.054 224 21 6 1 216 316005072 316005295 4.150000e-61 246.0
39 TraesCS7A01G261800 chr4B 82.653 196 30 4 2283 2476 78232931 78232738 2.570000e-38 171.0
40 TraesCS7A01G261800 chr4B 86.607 112 15 0 1891 2002 30729178 30729289 2.030000e-24 124.0
41 TraesCS7A01G261800 chr5B 83.243 185 27 4 2285 2467 160128031 160128213 3.330000e-37 167.0
42 TraesCS7A01G261800 chr4D 87.931 116 14 0 1888 2003 18693429 18693544 2.610000e-28 137.0
43 TraesCS7A01G261800 chr6A 87.387 111 13 1 1893 2003 563130885 563130776 5.650000e-25 126.0
44 TraesCS7A01G261800 chr6A 95.238 42 2 0 1756 1797 269004096 269004055 3.470000e-07 67.6
45 TraesCS7A01G261800 chr5D 87.387 111 13 1 1892 2002 443636495 443636604 5.650000e-25 126.0
46 TraesCS7A01G261800 chr6D 92.157 51 4 0 1747 1797 194263838 194263788 7.460000e-09 73.1
47 TraesCS7A01G261800 chr6D 94.737 38 2 0 2577 2614 346073942 346073979 5.810000e-05 60.2
48 TraesCS7A01G261800 chrUn 85.246 61 8 1 1737 1797 350057461 350057520 1.610000e-05 62.1
49 TraesCS7A01G261800 chr3D 100.000 32 0 0 2587 2618 443429108 443429139 5.810000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G261800 chr7A 257124093 257129462 5369 False 9917 9917 100.000 1 5370 1 chr7A.!!$F1 5369
1 TraesCS7A01G261800 chr7B 216935194 216939987 4793 True 6861 6861 92.550 239 5046 1 chr7B.!!$R1 4807
2 TraesCS7A01G261800 chr7D 241186259 241191359 5100 True 2410 4745 94.625 263 5046 3 chr7D.!!$R1 4783


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 205 0.100861 AGGAGCGCTCGTTAACTAGC 59.899 55.0 29.81 19.39 35.33 3.42 F
229 230 0.174617 CCGAGAAACCTCCTGCTCTC 59.825 60.0 0.00 0.00 0.00 3.20 F
1721 2145 0.958382 AGGCGGTAATTTTGCTCGCA 60.958 50.0 8.22 0.00 46.95 5.10 F
2381 2810 0.109597 AAATTGCTTCAAGCCGAGCG 60.110 50.0 7.01 0.00 41.51 5.03 F
3941 4411 0.324943 GACTTTACTCCAGCAGCCCA 59.675 55.0 0.00 0.00 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1721 2145 0.179045 CGCCTGCCTAAGCACCTAAT 60.179 55.000 0.00 0.0 46.52 1.73 R
1969 2393 0.886563 AGTCCGGAACTACTTGTCGG 59.113 55.000 5.23 0.0 36.07 4.79 R
3118 3580 1.482593 ACGGACTTGAGCTCCATTAGG 59.517 52.381 12.15 0.0 0.00 2.69 R
4207 4678 1.195448 CAGCAGCAAAGACGTGGTTAG 59.805 52.381 0.00 0.0 0.00 2.34 R
5135 5610 0.028902 GCCTGAAAACTCGCACGTTT 59.971 50.000 0.00 0.0 38.66 3.60 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.672983 ATTGATCGAAAAGCTAAGAAAGACA 57.327 32.000 0.00 0.00 0.00 3.41
26 27 6.712241 TGATCGAAAAGCTAAGAAAGACAG 57.288 37.500 0.00 0.00 0.00 3.51
27 28 5.639506 TGATCGAAAAGCTAAGAAAGACAGG 59.360 40.000 0.00 0.00 0.00 4.00
28 29 4.315803 TCGAAAAGCTAAGAAAGACAGGG 58.684 43.478 0.00 0.00 0.00 4.45
29 30 4.039973 TCGAAAAGCTAAGAAAGACAGGGA 59.960 41.667 0.00 0.00 0.00 4.20
30 31 4.390297 CGAAAAGCTAAGAAAGACAGGGAG 59.610 45.833 0.00 0.00 0.00 4.30
31 32 3.990959 AAGCTAAGAAAGACAGGGAGG 57.009 47.619 0.00 0.00 0.00 4.30
32 33 3.191888 AGCTAAGAAAGACAGGGAGGA 57.808 47.619 0.00 0.00 0.00 3.71
33 34 3.521727 AGCTAAGAAAGACAGGGAGGAA 58.478 45.455 0.00 0.00 0.00 3.36
34 35 3.910627 AGCTAAGAAAGACAGGGAGGAAA 59.089 43.478 0.00 0.00 0.00 3.13
35 36 4.004314 GCTAAGAAAGACAGGGAGGAAAC 58.996 47.826 0.00 0.00 0.00 2.78
36 37 3.510531 AAGAAAGACAGGGAGGAAACC 57.489 47.619 0.00 0.00 0.00 3.27
37 38 2.418669 AGAAAGACAGGGAGGAAACCA 58.581 47.619 0.00 0.00 0.00 3.67
38 39 2.783510 AGAAAGACAGGGAGGAAACCAA 59.216 45.455 0.00 0.00 0.00 3.67
39 40 3.204382 AGAAAGACAGGGAGGAAACCAAA 59.796 43.478 0.00 0.00 0.00 3.28
40 41 3.680777 AAGACAGGGAGGAAACCAAAA 57.319 42.857 0.00 0.00 0.00 2.44
41 42 2.945456 AGACAGGGAGGAAACCAAAAC 58.055 47.619 0.00 0.00 0.00 2.43
42 43 1.607148 GACAGGGAGGAAACCAAAACG 59.393 52.381 0.00 0.00 0.00 3.60
43 44 1.064240 ACAGGGAGGAAACCAAAACGT 60.064 47.619 0.00 0.00 0.00 3.99
44 45 1.607148 CAGGGAGGAAACCAAAACGTC 59.393 52.381 0.00 0.00 0.00 4.34
45 46 0.589708 GGGAGGAAACCAAAACGTCG 59.410 55.000 0.00 0.00 0.00 5.12
46 47 1.585297 GGAGGAAACCAAAACGTCGA 58.415 50.000 0.00 0.00 0.00 4.20
47 48 1.941975 GGAGGAAACCAAAACGTCGAA 59.058 47.619 0.00 0.00 0.00 3.71
48 49 2.355444 GGAGGAAACCAAAACGTCGAAA 59.645 45.455 0.00 0.00 0.00 3.46
49 50 3.181498 GGAGGAAACCAAAACGTCGAAAA 60.181 43.478 0.00 0.00 0.00 2.29
50 51 4.413969 GAGGAAACCAAAACGTCGAAAAA 58.586 39.130 0.00 0.00 0.00 1.94
81 82 7.854934 AAAAACCGTTTAAAAAGCCAAAAAC 57.145 28.000 0.00 0.00 0.00 2.43
82 83 6.555812 AAACCGTTTAAAAAGCCAAAAACA 57.444 29.167 0.00 0.00 32.61 2.83
83 84 5.533533 ACCGTTTAAAAAGCCAAAAACAC 57.466 34.783 0.00 0.00 32.61 3.32
84 85 4.091655 ACCGTTTAAAAAGCCAAAAACACG 59.908 37.500 0.00 0.00 32.61 4.49
85 86 4.091655 CCGTTTAAAAAGCCAAAAACACGT 59.908 37.500 0.00 0.00 32.61 4.49
86 87 5.010129 CGTTTAAAAAGCCAAAAACACGTG 58.990 37.500 15.48 15.48 32.61 4.49
87 88 4.585619 TTAAAAAGCCAAAAACACGTGC 57.414 36.364 17.22 0.00 0.00 5.34
88 89 0.995728 AAAAGCCAAAAACACGTGCG 59.004 45.000 17.22 0.00 0.00 5.34
89 90 0.171455 AAAGCCAAAAACACGTGCGA 59.829 45.000 17.22 0.00 0.00 5.10
90 91 0.171455 AAGCCAAAAACACGTGCGAA 59.829 45.000 17.22 0.00 0.00 4.70
91 92 0.171455 AGCCAAAAACACGTGCGAAA 59.829 45.000 17.22 0.00 0.00 3.46
92 93 0.992802 GCCAAAAACACGTGCGAAAA 59.007 45.000 17.22 0.00 0.00 2.29
93 94 1.390463 GCCAAAAACACGTGCGAAAAA 59.610 42.857 17.22 0.00 0.00 1.94
121 122 4.864704 AAAATTAAAAGAAGCGCCCAGA 57.135 36.364 2.29 0.00 0.00 3.86
122 123 4.440839 AAATTAAAAGAAGCGCCCAGAG 57.559 40.909 2.29 0.00 0.00 3.35
123 124 1.165270 TTAAAAGAAGCGCCCAGAGC 58.835 50.000 2.29 0.00 38.52 4.09
143 144 4.261888 GACACGTGGCGAATGACT 57.738 55.556 21.57 0.00 0.00 3.41
144 145 1.781555 GACACGTGGCGAATGACTG 59.218 57.895 21.57 0.00 0.00 3.51
145 146 0.666274 GACACGTGGCGAATGACTGA 60.666 55.000 21.57 0.00 0.00 3.41
146 147 0.667487 ACACGTGGCGAATGACTGAG 60.667 55.000 21.57 0.00 0.00 3.35
147 148 0.388520 CACGTGGCGAATGACTGAGA 60.389 55.000 7.95 0.00 0.00 3.27
148 149 0.109086 ACGTGGCGAATGACTGAGAG 60.109 55.000 0.00 0.00 0.00 3.20
149 150 1.416813 CGTGGCGAATGACTGAGAGC 61.417 60.000 0.00 0.00 0.00 4.09
150 151 1.153765 TGGCGAATGACTGAGAGCG 60.154 57.895 0.00 0.00 0.00 5.03
151 152 2.520904 GGCGAATGACTGAGAGCGC 61.521 63.158 0.00 0.00 43.27 5.92
152 153 2.854214 GCGAATGACTGAGAGCGCG 61.854 63.158 0.00 0.00 35.02 6.86
153 154 2.854214 CGAATGACTGAGAGCGCGC 61.854 63.158 26.66 26.66 0.00 6.86
154 155 2.510238 AATGACTGAGAGCGCGCC 60.510 61.111 30.33 19.60 0.00 6.53
155 156 3.300934 AATGACTGAGAGCGCGCCA 62.301 57.895 30.33 18.19 0.00 5.69
156 157 2.786539 AATGACTGAGAGCGCGCCAA 62.787 55.000 30.33 10.12 0.00 4.52
157 158 2.510238 GACTGAGAGCGCGCCAAT 60.510 61.111 30.33 14.57 0.00 3.16
158 159 2.046892 ACTGAGAGCGCGCCAATT 60.047 55.556 30.33 9.44 0.00 2.32
159 160 2.301902 GACTGAGAGCGCGCCAATTG 62.302 60.000 30.33 17.96 0.00 2.32
160 161 2.047370 TGAGAGCGCGCCAATTGA 60.047 55.556 30.33 3.97 0.00 2.57
161 162 2.301902 CTGAGAGCGCGCCAATTGAC 62.302 60.000 30.33 12.83 0.00 3.18
162 163 3.425938 GAGAGCGCGCCAATTGACG 62.426 63.158 30.33 10.02 0.00 4.35
168 169 4.983090 CGCCAATTGACGCTGATC 57.017 55.556 7.12 0.00 0.00 2.92
169 170 1.011904 CGCCAATTGACGCTGATCG 60.012 57.895 7.12 0.00 45.38 3.69
179 180 2.510238 GCTGATCGTTGCGAGGCT 60.510 61.111 0.00 0.00 39.91 4.58
180 181 2.103042 GCTGATCGTTGCGAGGCTT 61.103 57.895 0.00 0.00 39.91 4.35
181 182 2.002127 CTGATCGTTGCGAGGCTTC 58.998 57.895 0.00 0.00 39.91 3.86
182 183 1.424493 CTGATCGTTGCGAGGCTTCC 61.424 60.000 0.00 0.00 39.91 3.46
183 184 2.509336 ATCGTTGCGAGGCTTCCG 60.509 61.111 0.00 0.00 39.91 4.30
184 185 2.884087 GATCGTTGCGAGGCTTCCGA 62.884 60.000 0.00 0.00 39.91 4.55
185 186 2.501223 ATCGTTGCGAGGCTTCCGAA 62.501 55.000 0.00 0.00 39.91 4.30
186 187 2.730672 CGTTGCGAGGCTTCCGAAG 61.731 63.158 3.56 3.56 0.00 3.79
199 200 4.470876 CGAAGGAGCGCTCGTTAA 57.529 55.556 36.96 0.00 37.75 2.01
200 201 1.989163 CGAAGGAGCGCTCGTTAAC 59.011 57.895 36.96 26.47 37.75 2.01
201 202 0.456312 CGAAGGAGCGCTCGTTAACT 60.456 55.000 36.96 23.16 37.75 2.24
202 203 1.202110 CGAAGGAGCGCTCGTTAACTA 60.202 52.381 36.96 0.00 37.75 2.24
203 204 2.452105 GAAGGAGCGCTCGTTAACTAG 58.548 52.381 36.96 3.24 37.75 2.57
204 205 0.100861 AGGAGCGCTCGTTAACTAGC 59.899 55.000 29.81 19.39 35.33 3.42
205 206 0.870735 GGAGCGCTCGTTAACTAGCC 60.871 60.000 29.81 16.01 35.22 3.93
206 207 1.201098 GAGCGCTCGTTAACTAGCCG 61.201 60.000 23.61 18.20 35.22 5.52
207 208 2.857415 GCGCTCGTTAACTAGCCGC 61.857 63.158 22.30 22.46 35.22 6.53
208 209 1.226603 CGCTCGTTAACTAGCCGCT 60.227 57.895 22.30 0.00 35.22 5.52
209 210 1.201098 CGCTCGTTAACTAGCCGCTC 61.201 60.000 22.30 0.24 35.22 5.03
210 211 0.870735 GCTCGTTAACTAGCCGCTCC 60.871 60.000 18.79 0.00 32.40 4.70
211 212 0.248949 CTCGTTAACTAGCCGCTCCC 60.249 60.000 0.00 0.00 0.00 4.30
212 213 1.588139 CGTTAACTAGCCGCTCCCG 60.588 63.158 0.00 0.00 0.00 5.14
213 214 1.811860 GTTAACTAGCCGCTCCCGA 59.188 57.895 0.00 0.00 36.29 5.14
214 215 0.248949 GTTAACTAGCCGCTCCCGAG 60.249 60.000 0.00 0.00 36.29 4.63
215 216 0.394762 TTAACTAGCCGCTCCCGAGA 60.395 55.000 0.00 0.00 36.29 4.04
216 217 0.394762 TAACTAGCCGCTCCCGAGAA 60.395 55.000 0.00 0.00 36.29 2.87
217 218 1.255667 AACTAGCCGCTCCCGAGAAA 61.256 55.000 0.00 0.00 36.29 2.52
218 219 1.227002 CTAGCCGCTCCCGAGAAAC 60.227 63.158 0.00 0.00 36.29 2.78
219 220 2.630592 CTAGCCGCTCCCGAGAAACC 62.631 65.000 0.00 0.00 36.29 3.27
220 221 4.083862 GCCGCTCCCGAGAAACCT 62.084 66.667 0.00 0.00 36.29 3.50
221 222 2.184579 CCGCTCCCGAGAAACCTC 59.815 66.667 0.00 0.00 36.29 3.85
222 223 2.184579 CGCTCCCGAGAAACCTCC 59.815 66.667 0.00 0.00 36.29 4.30
223 224 2.352032 CGCTCCCGAGAAACCTCCT 61.352 63.158 0.00 0.00 36.29 3.69
224 225 1.219393 GCTCCCGAGAAACCTCCTG 59.781 63.158 0.00 0.00 0.00 3.86
225 226 1.219393 CTCCCGAGAAACCTCCTGC 59.781 63.158 0.00 0.00 0.00 4.85
226 227 1.229209 TCCCGAGAAACCTCCTGCT 60.229 57.895 0.00 0.00 0.00 4.24
227 228 1.219393 CCCGAGAAACCTCCTGCTC 59.781 63.158 0.00 0.00 0.00 4.26
228 229 1.261238 CCCGAGAAACCTCCTGCTCT 61.261 60.000 0.00 0.00 0.00 4.09
229 230 0.174617 CCGAGAAACCTCCTGCTCTC 59.825 60.000 0.00 0.00 0.00 3.20
230 231 1.181786 CGAGAAACCTCCTGCTCTCT 58.818 55.000 0.00 0.00 33.58 3.10
231 232 1.134175 CGAGAAACCTCCTGCTCTCTC 59.866 57.143 0.00 0.00 33.58 3.20
232 233 2.456577 GAGAAACCTCCTGCTCTCTCT 58.543 52.381 0.00 0.00 33.09 3.10
233 234 3.626930 GAGAAACCTCCTGCTCTCTCTA 58.373 50.000 0.00 0.00 33.09 2.43
234 235 4.020543 GAGAAACCTCCTGCTCTCTCTAA 58.979 47.826 0.00 0.00 33.09 2.10
235 236 4.421131 AGAAACCTCCTGCTCTCTCTAAA 58.579 43.478 0.00 0.00 0.00 1.85
236 237 4.466015 AGAAACCTCCTGCTCTCTCTAAAG 59.534 45.833 0.00 0.00 0.00 1.85
237 238 3.748645 ACCTCCTGCTCTCTCTAAAGA 57.251 47.619 0.00 0.00 0.00 2.52
420 813 1.072965 CCCAAGGTCAGTCAGCTCTTT 59.927 52.381 0.00 0.00 30.18 2.52
430 823 3.679025 CAGTCAGCTCTTTGTGACATCTC 59.321 47.826 5.35 0.00 44.70 2.75
553 946 1.471153 GCGGTAACTGAGTAAGCTCCC 60.471 57.143 0.00 0.00 40.95 4.30
719 1120 7.443272 TCATTGTATGATTCCAGAGCATAAGTG 59.557 37.037 0.00 0.00 33.59 3.16
757 1158 2.642154 TTTGTACGGTTCCACCATGT 57.358 45.000 0.00 0.00 38.47 3.21
780 1181 2.760159 CCCTTTGTATGCGCCCGTG 61.760 63.158 4.18 0.00 0.00 4.94
834 1236 4.250464 TCGACCATCTAAACAACCATGTC 58.750 43.478 0.00 0.00 39.40 3.06
844 1246 7.685481 TCTAAACAACCATGTCCTGATAGAAA 58.315 34.615 0.00 0.00 39.40 2.52
853 1255 3.938963 TGTCCTGATAGAAATTTGGCGTC 59.061 43.478 0.00 0.00 0.00 5.19
996 1398 3.244009 TGCTATTGCTCCTCTGCTGATAC 60.244 47.826 0.00 0.00 40.48 2.24
1004 1406 3.378512 TCCTCTGCTGATACAAGATGGT 58.621 45.455 0.00 0.00 0.00 3.55
1037 1439 1.662044 CAAGGGCTTGTGTCTTGGC 59.338 57.895 0.00 0.00 35.53 4.52
1052 1454 2.195139 GGCCCTCTGCATCATGCT 59.805 61.111 11.84 0.00 45.31 3.79
1125 1527 5.006358 GTGTTTCTCGCATAACGTGGAATAT 59.994 40.000 0.00 0.00 44.19 1.28
1231 1633 4.338879 GGTAAGGACCTAACCCCTTTTTC 58.661 47.826 0.00 0.00 43.16 2.29
1261 1664 8.942338 TCTATGTAAATCACGCAAGAATAAGT 57.058 30.769 0.00 0.00 43.62 2.24
1285 1688 7.880195 AGTATCATCCAATGGTTACTTAGATGC 59.120 37.037 0.00 0.00 30.63 3.91
1311 1714 5.539574 TGATGCATTATTGGGTATCAAAGGG 59.460 40.000 0.00 0.00 39.05 3.95
1475 1878 9.999660 TTGTGTTGGTATTTGAAGTACTACATA 57.000 29.630 0.00 5.12 0.00 2.29
1552 1962 9.628746 TTTGTAAGTTTTGAACACCTTTAAGTC 57.371 29.630 0.00 0.00 0.00 3.01
1553 1963 8.570068 TGTAAGTTTTGAACACCTTTAAGTCT 57.430 30.769 0.00 0.00 0.00 3.24
1554 1964 9.016438 TGTAAGTTTTGAACACCTTTAAGTCTT 57.984 29.630 0.00 0.00 0.00 3.01
1555 1965 9.850628 GTAAGTTTTGAACACCTTTAAGTCTTT 57.149 29.630 0.00 0.00 0.00 2.52
1558 1968 9.850628 AGTTTTGAACACCTTTAAGTCTTTAAC 57.149 29.630 0.00 0.00 0.00 2.01
1559 1969 9.628746 GTTTTGAACACCTTTAAGTCTTTAACA 57.371 29.630 0.00 0.00 0.00 2.41
1561 1971 9.796120 TTTGAACACCTTTAAGTCTTTAACATG 57.204 29.630 0.00 0.00 0.00 3.21
1562 1972 8.514330 TGAACACCTTTAAGTCTTTAACATGT 57.486 30.769 0.00 0.00 0.00 3.21
1563 1973 9.616156 TGAACACCTTTAAGTCTTTAACATGTA 57.384 29.630 0.00 0.00 0.00 2.29
1565 1975 8.617290 ACACCTTTAAGTCTTTAACATGTAGG 57.383 34.615 0.00 0.00 32.03 3.18
1566 1976 8.434392 ACACCTTTAAGTCTTTAACATGTAGGA 58.566 33.333 0.00 0.00 31.02 2.94
1567 1977 9.449719 CACCTTTAAGTCTTTAACATGTAGGAT 57.550 33.333 0.00 0.00 31.02 3.24
1604 2014 4.755411 TGCAGACTACTAACTATGGCAAC 58.245 43.478 0.00 0.00 0.00 4.17
1610 2023 7.438459 CAGACTACTAACTATGGCAACCATTAC 59.562 40.741 4.11 0.00 42.23 1.89
1668 2081 2.096013 TGTTCAACGAAAACATGCACGA 59.904 40.909 0.00 0.00 31.90 4.35
1721 2145 0.958382 AGGCGGTAATTTTGCTCGCA 60.958 50.000 8.22 0.00 46.95 5.10
1925 2349 5.180271 TCCGGAATTACTTGTCGCTTAAAT 58.820 37.500 0.00 0.00 0.00 1.40
1949 2373 8.988064 ATGGATGTATCTAGCACTAAAATACG 57.012 34.615 0.00 0.00 0.00 3.06
1969 2393 4.918037 ACGTCTAGATACATCCGTTTGAC 58.082 43.478 0.00 0.00 0.00 3.18
1979 2403 2.427232 TCCGTTTGACCGACAAGTAG 57.573 50.000 0.00 0.00 39.77 2.57
1988 2412 0.886563 CCGACAAGTAGTTCCGGACT 59.113 55.000 1.83 7.79 42.49 3.85
2107 2531 8.962679 TGTGGAATTTGAAACCCTACATTATAC 58.037 33.333 0.91 0.00 0.00 1.47
2108 2532 8.962679 GTGGAATTTGAAACCCTACATTATACA 58.037 33.333 0.91 0.00 0.00 2.29
2109 2533 9.184523 TGGAATTTGAAACCCTACATTATACAG 57.815 33.333 0.91 0.00 0.00 2.74
2110 2534 9.403583 GGAATTTGAAACCCTACATTATACAGA 57.596 33.333 0.00 0.00 0.00 3.41
2112 2536 8.980481 ATTTGAAACCCTACATTATACAGAGG 57.020 34.615 0.00 0.00 0.00 3.69
2210 2638 4.411927 ACAAACATTATGCAACACCCCTA 58.588 39.130 0.00 0.00 0.00 3.53
2234 2662 0.760572 GGCTACCGGTTATAAGGCCA 59.239 55.000 15.04 0.00 38.16 5.36
2288 2716 2.539338 CCACGGACCAACACCAACG 61.539 63.158 0.00 0.00 0.00 4.10
2381 2810 0.109597 AAATTGCTTCAAGCCGAGCG 60.110 50.000 7.01 0.00 41.51 5.03
2434 2863 4.319839 GCTCCTGGAAAAAGAAGAGTTTCG 60.320 45.833 0.00 0.00 38.38 3.46
2440 2869 5.413213 TGGAAAAAGAAGAGTTTCGTGTTGA 59.587 36.000 0.00 0.00 38.38 3.18
2460 2889 9.372369 GTGTTGATATGAGTAGCCTATTAATCC 57.628 37.037 0.00 0.00 0.00 3.01
2493 2922 6.662755 TGGATGTTTTAGGCACATAGAAGAT 58.337 36.000 0.00 0.00 34.89 2.40
2511 2940 9.737427 ATAGAAGATACAAGTCGTTCAGTATTG 57.263 33.333 0.00 0.00 0.00 1.90
2516 2945 9.517609 AGATACAAGTCGTTCAGTATTGTATTC 57.482 33.333 9.50 4.85 43.50 1.75
2717 3168 6.529125 CAGTGGAGCATAGCTTTATTTTGTTG 59.471 38.462 0.00 0.00 39.88 3.33
2771 3222 3.159213 AGTGGAATGTCATTGCTTCCA 57.841 42.857 16.84 9.62 44.64 3.53
2774 3225 4.459390 TGGAATGTCATTGCTTCCATTG 57.541 40.909 16.84 0.00 42.60 2.82
2788 3239 4.698575 CTTCCATTGGCTAGAGTAGTTCC 58.301 47.826 0.00 0.00 0.00 3.62
2799 3260 3.215975 AGAGTAGTTCCGAGTAGATGGC 58.784 50.000 0.00 0.00 0.00 4.40
2801 3262 2.091775 AGTAGTTCCGAGTAGATGGCCT 60.092 50.000 3.32 0.00 0.00 5.19
2812 3273 6.263168 CCGAGTAGATGGCCTTTTGAATAAAT 59.737 38.462 3.32 0.00 0.00 1.40
2886 3348 6.782494 TCTTGGTCTTCCTATATATGAGTGCA 59.218 38.462 0.00 0.00 34.23 4.57
2927 3389 8.567948 CAATACAATTTGCTACGATATTTCCCT 58.432 33.333 0.00 0.00 0.00 4.20
2933 3395 7.724305 TTTGCTACGATATTTCCCTGTTATC 57.276 36.000 0.00 0.00 0.00 1.75
2935 3397 6.688578 TGCTACGATATTTCCCTGTTATCTC 58.311 40.000 0.00 0.00 0.00 2.75
2939 3401 5.012148 ACGATATTTCCCTGTTATCTCCCTG 59.988 44.000 0.00 0.00 0.00 4.45
2969 3431 0.961019 TGCATCACTCCTTTTGTGGC 59.039 50.000 0.00 0.00 36.21 5.01
3144 3606 0.885196 GAGCTCAAGTCCGTGACTCT 59.115 55.000 9.40 1.16 42.59 3.24
3342 3811 3.573967 ACTTTGGGTAAGCAAGAACATGG 59.426 43.478 0.00 0.00 37.37 3.66
3343 3812 2.969821 TGGGTAAGCAAGAACATGGT 57.030 45.000 0.00 0.00 0.00 3.55
3349 3818 2.645838 AGCAAGAACATGGTGTCACT 57.354 45.000 2.35 0.00 0.00 3.41
3765 4235 2.230130 AGACTTCACTCTAGCAGCCT 57.770 50.000 0.00 0.00 0.00 4.58
3803 4273 4.693566 TCGTAAATTTAACCTGCAGTCCAG 59.306 41.667 13.81 0.00 41.41 3.86
3820 4290 8.428852 TGCAGTCCAGCAGAATAATTAGTAATA 58.571 33.333 0.00 0.00 40.11 0.98
3867 4337 1.560505 GTGTTTCTACCCCCTCCGTA 58.439 55.000 0.00 0.00 0.00 4.02
3909 4379 0.746063 TTTGGCAGTTCTTGGTGCTG 59.254 50.000 0.00 0.00 39.76 4.41
3941 4411 0.324943 GACTTTACTCCAGCAGCCCA 59.675 55.000 0.00 0.00 0.00 5.36
3949 4420 2.567497 CCAGCAGCCCACAAGTTGG 61.567 63.158 7.96 0.00 46.47 3.77
3973 4444 9.667107 TGGACTGATCTAAATTTTAACCTGTAG 57.333 33.333 0.00 0.00 0.00 2.74
4107 4578 5.301805 ACCATGGTTTGTCGAGAAATCTTTT 59.698 36.000 13.00 2.25 0.00 2.27
4141 4612 4.080919 ACTTCAGTGTATGAGCTTATGCCA 60.081 41.667 0.32 0.00 39.68 4.92
4217 4688 3.000727 CCCTTTGTCATCTAACCACGTC 58.999 50.000 0.00 0.00 0.00 4.34
4221 4692 5.334105 CCTTTGTCATCTAACCACGTCTTTG 60.334 44.000 0.00 0.00 0.00 2.77
4223 4694 3.244078 TGTCATCTAACCACGTCTTTGCT 60.244 43.478 0.00 0.00 0.00 3.91
4288 4759 3.112709 GCGCTTTTCGAGTCGGCT 61.113 61.111 13.54 0.00 41.67 5.52
4290 4761 2.022129 CGCTTTTCGAGTCGGCTGT 61.022 57.895 13.54 0.00 41.67 4.40
4524 4995 4.681074 TGACACTTCACAGTTCCATGTA 57.319 40.909 0.00 0.00 0.00 2.29
4525 4996 4.631131 TGACACTTCACAGTTCCATGTAG 58.369 43.478 0.00 0.00 0.00 2.74
4526 4997 4.100963 TGACACTTCACAGTTCCATGTAGT 59.899 41.667 0.00 0.00 0.00 2.73
4527 4998 5.303333 TGACACTTCACAGTTCCATGTAGTA 59.697 40.000 0.00 0.00 0.00 1.82
4559 5030 1.069022 CCATATTCGCCATTTCGCCAG 60.069 52.381 0.00 0.00 0.00 4.85
4599 5070 1.237285 CCACTTTTCGCCCTGACTGG 61.237 60.000 0.00 0.00 0.00 4.00
4631 5102 3.096461 CGCAAAGCTGATTTTCATCGAG 58.904 45.455 0.00 0.00 31.08 4.04
4643 5114 2.245159 TCATCGAGATGGCATGTTCC 57.755 50.000 3.81 0.00 39.24 3.62
4673 5144 7.081526 TGTACTGGTAGAAACGATAGAAGAC 57.918 40.000 0.00 0.00 41.38 3.01
4777 5248 2.184322 CGCCGTCACAGTAGCCAT 59.816 61.111 0.00 0.00 0.00 4.40
4798 5269 6.060788 CCATAAGAGGAAGAGGAATTGAAGG 58.939 44.000 0.00 0.00 0.00 3.46
4935 5406 3.726517 CTGAGCGCCCAACCAACG 61.727 66.667 2.29 0.00 0.00 4.10
5042 5517 4.991776 TCCCTGTGATTCTATCTCGATCT 58.008 43.478 0.00 0.00 0.00 2.75
5046 5521 6.376864 CCCTGTGATTCTATCTCGATCTACAT 59.623 42.308 0.00 0.00 0.00 2.29
5047 5522 7.554476 CCCTGTGATTCTATCTCGATCTACATA 59.446 40.741 0.00 0.00 0.00 2.29
5048 5523 9.119418 CCTGTGATTCTATCTCGATCTACATAT 57.881 37.037 0.00 0.00 0.00 1.78
5070 5545 9.119329 CATATACTCTACATACAGAAGAAACGC 57.881 37.037 0.00 0.00 0.00 4.84
5071 5546 4.413087 ACTCTACATACAGAAGAAACGCG 58.587 43.478 3.53 3.53 0.00 6.01
5072 5547 3.176708 TCTACATACAGAAGAAACGCGC 58.823 45.455 5.73 0.00 0.00 6.86
5073 5548 2.080286 ACATACAGAAGAAACGCGCT 57.920 45.000 5.73 0.00 0.00 5.92
5074 5549 1.993370 ACATACAGAAGAAACGCGCTC 59.007 47.619 5.73 2.69 0.00 5.03
5075 5550 1.007011 CATACAGAAGAAACGCGCTCG 60.007 52.381 5.73 0.00 42.43 5.03
5085 5560 2.645567 CGCGCTCGTATGATCCCT 59.354 61.111 5.56 0.00 0.00 4.20
5086 5561 1.442857 CGCGCTCGTATGATCCCTC 60.443 63.158 5.56 0.00 0.00 4.30
5087 5562 1.080434 GCGCTCGTATGATCCCTCC 60.080 63.158 0.00 0.00 0.00 4.30
5088 5563 1.806461 GCGCTCGTATGATCCCTCCA 61.806 60.000 0.00 0.00 0.00 3.86
5089 5564 0.673985 CGCTCGTATGATCCCTCCAA 59.326 55.000 0.00 0.00 0.00 3.53
5090 5565 1.336332 CGCTCGTATGATCCCTCCAAG 60.336 57.143 0.00 0.00 0.00 3.61
5091 5566 1.001406 GCTCGTATGATCCCTCCAAGG 59.999 57.143 0.00 0.00 34.30 3.61
5092 5567 1.001406 CTCGTATGATCCCTCCAAGGC 59.999 57.143 0.00 0.00 32.73 4.35
5093 5568 0.758734 CGTATGATCCCTCCAAGGCA 59.241 55.000 0.00 0.00 32.73 4.75
5094 5569 1.349026 CGTATGATCCCTCCAAGGCAT 59.651 52.381 0.00 0.00 32.73 4.40
5095 5570 2.613977 CGTATGATCCCTCCAAGGCATC 60.614 54.545 0.00 0.00 32.73 3.91
5096 5571 0.776176 ATGATCCCTCCAAGGCATCC 59.224 55.000 0.00 0.00 32.73 3.51
5097 5572 1.355718 TGATCCCTCCAAGGCATCCC 61.356 60.000 0.00 0.00 32.73 3.85
5098 5573 1.006631 ATCCCTCCAAGGCATCCCT 59.993 57.895 0.00 0.00 45.77 4.20
5099 5574 1.064824 ATCCCTCCAAGGCATCCCTC 61.065 60.000 0.00 0.00 41.90 4.30
5100 5575 2.002977 CCCTCCAAGGCATCCCTCA 61.003 63.158 0.00 0.00 41.90 3.86
5101 5576 1.358830 CCCTCCAAGGCATCCCTCAT 61.359 60.000 0.00 0.00 41.90 2.90
5102 5577 0.110104 CCTCCAAGGCATCCCTCATC 59.890 60.000 0.00 0.00 41.90 2.92
5103 5578 0.841961 CTCCAAGGCATCCCTCATCA 59.158 55.000 0.00 0.00 41.90 3.07
5104 5579 1.424302 CTCCAAGGCATCCCTCATCAT 59.576 52.381 0.00 0.00 41.90 2.45
5105 5580 1.144298 TCCAAGGCATCCCTCATCATG 59.856 52.381 0.00 0.00 41.90 3.07
5106 5581 0.959553 CAAGGCATCCCTCATCATGC 59.040 55.000 0.00 0.00 41.90 4.06
5107 5582 0.851469 AAGGCATCCCTCATCATGCT 59.149 50.000 4.05 0.00 44.20 3.79
5108 5583 0.851469 AGGCATCCCTCATCATGCTT 59.149 50.000 4.05 0.00 44.20 3.91
5109 5584 0.959553 GGCATCCCTCATCATGCTTG 59.040 55.000 4.05 0.00 44.20 4.01
5110 5585 1.688772 GCATCCCTCATCATGCTTGT 58.311 50.000 0.00 0.00 41.93 3.16
5111 5586 2.029623 GCATCCCTCATCATGCTTGTT 58.970 47.619 0.00 0.00 41.93 2.83
5112 5587 2.429610 GCATCCCTCATCATGCTTGTTT 59.570 45.455 0.00 0.00 41.93 2.83
5113 5588 3.490419 GCATCCCTCATCATGCTTGTTTC 60.490 47.826 0.00 0.00 41.93 2.78
5114 5589 3.438216 TCCCTCATCATGCTTGTTTCA 57.562 42.857 0.00 0.00 0.00 2.69
5115 5590 3.972133 TCCCTCATCATGCTTGTTTCAT 58.028 40.909 0.00 0.00 0.00 2.57
5116 5591 3.697542 TCCCTCATCATGCTTGTTTCATG 59.302 43.478 0.00 0.00 41.87 3.07
5117 5592 3.181479 CCCTCATCATGCTTGTTTCATGG 60.181 47.826 0.00 0.00 41.11 3.66
5118 5593 3.697542 CCTCATCATGCTTGTTTCATGGA 59.302 43.478 0.00 0.00 41.11 3.41
5119 5594 4.439700 CCTCATCATGCTTGTTTCATGGAC 60.440 45.833 0.00 0.00 41.11 4.02
5120 5595 4.080687 TCATCATGCTTGTTTCATGGACA 58.919 39.130 0.00 0.00 41.11 4.02
5121 5596 4.523558 TCATCATGCTTGTTTCATGGACAA 59.476 37.500 12.79 12.79 41.11 3.18
5122 5597 5.186215 TCATCATGCTTGTTTCATGGACAAT 59.814 36.000 13.50 0.74 41.11 2.71
5123 5598 5.471556 TCATGCTTGTTTCATGGACAATT 57.528 34.783 13.50 3.20 41.11 2.32
5124 5599 5.856156 TCATGCTTGTTTCATGGACAATTT 58.144 33.333 13.50 2.94 41.11 1.82
5125 5600 5.697178 TCATGCTTGTTTCATGGACAATTTG 59.303 36.000 13.50 11.62 41.11 2.32
5126 5601 5.273674 TGCTTGTTTCATGGACAATTTGA 57.726 34.783 13.50 0.00 36.51 2.69
5127 5602 5.668471 TGCTTGTTTCATGGACAATTTGAA 58.332 33.333 13.50 0.00 36.51 2.69
5128 5603 6.111382 TGCTTGTTTCATGGACAATTTGAAA 58.889 32.000 13.50 0.00 36.51 2.69
5129 5604 6.766944 TGCTTGTTTCATGGACAATTTGAAAT 59.233 30.769 13.50 0.00 40.37 2.17
5130 5605 7.073265 GCTTGTTTCATGGACAATTTGAAATG 58.927 34.615 13.50 4.28 40.37 2.32
5131 5606 7.041916 GCTTGTTTCATGGACAATTTGAAATGA 60.042 33.333 13.50 6.40 40.37 2.57
5132 5607 7.949903 TGTTTCATGGACAATTTGAAATGAG 57.050 32.000 2.79 0.00 40.37 2.90
5133 5608 6.424509 TGTTTCATGGACAATTTGAAATGAGC 59.575 34.615 2.79 6.82 40.37 4.26
5134 5609 4.735985 TCATGGACAATTTGAAATGAGCG 58.264 39.130 2.79 0.00 0.00 5.03
5135 5610 4.458642 TCATGGACAATTTGAAATGAGCGA 59.541 37.500 2.79 0.00 0.00 4.93
5136 5611 4.844998 TGGACAATTTGAAATGAGCGAA 57.155 36.364 2.79 0.00 0.00 4.70
5137 5612 5.193663 TGGACAATTTGAAATGAGCGAAA 57.806 34.783 2.79 0.00 0.00 3.46
5138 5613 4.981674 TGGACAATTTGAAATGAGCGAAAC 59.018 37.500 2.79 0.00 0.00 2.78
5139 5614 4.088496 GGACAATTTGAAATGAGCGAAACG 59.912 41.667 2.79 0.00 0.00 3.60
5140 5615 4.606961 ACAATTTGAAATGAGCGAAACGT 58.393 34.783 2.79 0.00 0.00 3.99
5141 5616 4.440758 ACAATTTGAAATGAGCGAAACGTG 59.559 37.500 2.79 0.00 0.00 4.49
5142 5617 2.031037 TTGAAATGAGCGAAACGTGC 57.969 45.000 0.00 0.00 0.00 5.34
5143 5618 0.110867 TGAAATGAGCGAAACGTGCG 60.111 50.000 6.70 6.70 37.44 5.34
5144 5619 0.162933 GAAATGAGCGAAACGTGCGA 59.837 50.000 14.31 0.00 37.44 5.10
5145 5620 0.163788 AAATGAGCGAAACGTGCGAG 59.836 50.000 14.31 0.00 37.44 5.03
5146 5621 0.944311 AATGAGCGAAACGTGCGAGT 60.944 50.000 14.31 1.36 37.44 4.18
5147 5622 0.944311 ATGAGCGAAACGTGCGAGTT 60.944 50.000 14.31 0.00 37.44 3.01
5148 5623 1.149361 TGAGCGAAACGTGCGAGTTT 61.149 50.000 14.31 8.77 45.85 2.66
5149 5624 0.042448 GAGCGAAACGTGCGAGTTTT 60.042 50.000 14.31 0.00 43.54 2.43
5150 5625 0.042448 AGCGAAACGTGCGAGTTTTC 60.042 50.000 14.31 0.00 43.54 2.29
5151 5626 0.315544 GCGAAACGTGCGAGTTTTCA 60.316 50.000 14.31 0.00 43.54 2.69
5152 5627 1.647748 CGAAACGTGCGAGTTTTCAG 58.352 50.000 10.10 3.33 43.54 3.02
5153 5628 1.656429 CGAAACGTGCGAGTTTTCAGG 60.656 52.381 10.10 0.00 43.54 3.86
5154 5629 0.028902 AAACGTGCGAGTTTTCAGGC 59.971 50.000 0.00 0.00 41.04 4.85
5155 5630 1.092921 AACGTGCGAGTTTTCAGGCA 61.093 50.000 0.00 0.00 0.00 4.75
5156 5631 0.884704 ACGTGCGAGTTTTCAGGCAT 60.885 50.000 0.00 0.00 37.77 4.40
5157 5632 0.238289 CGTGCGAGTTTTCAGGCATT 59.762 50.000 0.00 0.00 37.77 3.56
5158 5633 1.463056 CGTGCGAGTTTTCAGGCATTA 59.537 47.619 0.00 0.00 37.77 1.90
5159 5634 2.474526 CGTGCGAGTTTTCAGGCATTAG 60.475 50.000 0.00 0.00 37.77 1.73
5160 5635 2.484264 GTGCGAGTTTTCAGGCATTAGT 59.516 45.455 0.00 0.00 37.77 2.24
5161 5636 2.483877 TGCGAGTTTTCAGGCATTAGTG 59.516 45.455 0.00 0.00 0.00 2.74
5162 5637 2.484264 GCGAGTTTTCAGGCATTAGTGT 59.516 45.455 0.00 0.00 0.00 3.55
5163 5638 3.667960 GCGAGTTTTCAGGCATTAGTGTG 60.668 47.826 0.00 0.00 0.00 3.82
5164 5639 3.498397 CGAGTTTTCAGGCATTAGTGTGT 59.502 43.478 0.00 0.00 0.00 3.72
5165 5640 4.377431 CGAGTTTTCAGGCATTAGTGTGTC 60.377 45.833 0.00 0.00 0.00 3.67
5166 5641 3.821033 AGTTTTCAGGCATTAGTGTGTCC 59.179 43.478 0.00 0.00 0.00 4.02
5167 5642 2.489938 TTCAGGCATTAGTGTGTCCC 57.510 50.000 0.00 0.00 0.00 4.46
5168 5643 1.656587 TCAGGCATTAGTGTGTCCCT 58.343 50.000 0.00 0.00 0.00 4.20
5169 5644 1.555075 TCAGGCATTAGTGTGTCCCTC 59.445 52.381 0.00 0.00 0.00 4.30
5170 5645 0.912486 AGGCATTAGTGTGTCCCTCC 59.088 55.000 0.00 0.00 0.00 4.30
5171 5646 0.462047 GGCATTAGTGTGTCCCTCCG 60.462 60.000 0.00 0.00 0.00 4.63
5172 5647 0.535335 GCATTAGTGTGTCCCTCCGA 59.465 55.000 0.00 0.00 0.00 4.55
5173 5648 1.739371 GCATTAGTGTGTCCCTCCGAC 60.739 57.143 0.00 0.00 42.33 4.79
5179 5654 2.203640 TGTCCCTCCGACAGTGCT 60.204 61.111 0.00 0.00 46.80 4.40
5180 5655 2.262915 GTCCCTCCGACAGTGCTG 59.737 66.667 0.00 0.00 41.54 4.41
5181 5656 3.695606 TCCCTCCGACAGTGCTGC 61.696 66.667 0.00 0.00 0.00 5.25
5182 5657 3.699894 CCCTCCGACAGTGCTGCT 61.700 66.667 0.00 0.00 0.00 4.24
5183 5658 2.345244 CCTCCGACAGTGCTGCTT 59.655 61.111 0.00 0.00 0.00 3.91
5184 5659 1.302033 CCTCCGACAGTGCTGCTTT 60.302 57.895 0.00 0.00 0.00 3.51
5185 5660 1.294659 CCTCCGACAGTGCTGCTTTC 61.295 60.000 0.00 0.00 0.00 2.62
5186 5661 1.294659 CTCCGACAGTGCTGCTTTCC 61.295 60.000 0.00 0.00 0.00 3.13
5187 5662 1.302033 CCGACAGTGCTGCTTTCCT 60.302 57.895 0.00 0.00 0.00 3.36
5188 5663 1.294659 CCGACAGTGCTGCTTTCCTC 61.295 60.000 0.00 0.00 0.00 3.71
5189 5664 1.294659 CGACAGTGCTGCTTTCCTCC 61.295 60.000 0.00 0.00 0.00 4.30
5190 5665 0.250467 GACAGTGCTGCTTTCCTCCA 60.250 55.000 0.00 0.00 0.00 3.86
5191 5666 0.403271 ACAGTGCTGCTTTCCTCCAT 59.597 50.000 0.00 0.00 0.00 3.41
5192 5667 1.093159 CAGTGCTGCTTTCCTCCATC 58.907 55.000 0.00 0.00 0.00 3.51
5193 5668 0.392193 AGTGCTGCTTTCCTCCATCG 60.392 55.000 0.00 0.00 0.00 3.84
5194 5669 1.746615 TGCTGCTTTCCTCCATCGC 60.747 57.895 0.00 0.00 0.00 4.58
5195 5670 2.476320 GCTGCTTTCCTCCATCGCC 61.476 63.158 0.00 0.00 0.00 5.54
5196 5671 1.078214 CTGCTTTCCTCCATCGCCA 60.078 57.895 0.00 0.00 0.00 5.69
5197 5672 1.372087 CTGCTTTCCTCCATCGCCAC 61.372 60.000 0.00 0.00 0.00 5.01
5198 5673 2.115291 GCTTTCCTCCATCGCCACC 61.115 63.158 0.00 0.00 0.00 4.61
5199 5674 1.299648 CTTTCCTCCATCGCCACCA 59.700 57.895 0.00 0.00 0.00 4.17
5200 5675 0.322456 CTTTCCTCCATCGCCACCAA 60.322 55.000 0.00 0.00 0.00 3.67
5201 5676 0.322456 TTTCCTCCATCGCCACCAAG 60.322 55.000 0.00 0.00 0.00 3.61
5202 5677 2.124570 CCTCCATCGCCACCAAGG 60.125 66.667 0.00 0.00 41.84 3.61
5219 5694 1.501582 AGGCTAACCTCTGGATCACC 58.498 55.000 0.00 0.00 46.34 4.02
5220 5695 0.105039 GGCTAACCTCTGGATCACCG 59.895 60.000 0.00 0.00 39.42 4.94
5221 5696 0.530870 GCTAACCTCTGGATCACCGC 60.531 60.000 0.00 0.00 39.42 5.68
5222 5697 0.105039 CTAACCTCTGGATCACCGCC 59.895 60.000 0.00 0.00 39.42 6.13
5223 5698 1.672854 TAACCTCTGGATCACCGCCG 61.673 60.000 0.00 0.00 39.42 6.46
5224 5699 4.227134 CCTCTGGATCACCGCCGG 62.227 72.222 0.00 0.00 39.42 6.13
5225 5700 3.461773 CTCTGGATCACCGCCGGT 61.462 66.667 1.02 1.02 39.42 5.28
5226 5701 2.043752 TCTGGATCACCGCCGGTA 60.044 61.111 9.25 0.00 39.42 4.02
5227 5702 1.456892 TCTGGATCACCGCCGGTAT 60.457 57.895 9.25 2.91 39.42 2.73
5228 5703 0.178984 TCTGGATCACCGCCGGTATA 60.179 55.000 9.25 0.00 39.42 1.47
5229 5704 0.677288 CTGGATCACCGCCGGTATAA 59.323 55.000 9.25 0.00 39.42 0.98
5230 5705 1.069513 CTGGATCACCGCCGGTATAAA 59.930 52.381 9.25 0.00 39.42 1.40
5231 5706 1.485480 TGGATCACCGCCGGTATAAAA 59.515 47.619 9.25 0.00 39.42 1.52
5232 5707 2.093075 TGGATCACCGCCGGTATAAAAA 60.093 45.455 9.25 0.00 39.42 1.94
5253 5728 7.883229 AAAAATTAGGGTCTTTGTTATTGCG 57.117 32.000 0.00 0.00 0.00 4.85
5254 5729 4.632538 ATTAGGGTCTTTGTTATTGCGC 57.367 40.909 0.00 0.00 0.00 6.09
5255 5730 0.802494 AGGGTCTTTGTTATTGCGCG 59.198 50.000 0.00 0.00 0.00 6.86
5256 5731 0.800012 GGGTCTTTGTTATTGCGCGA 59.200 50.000 12.10 0.00 0.00 5.87
5257 5732 1.202031 GGGTCTTTGTTATTGCGCGAG 60.202 52.381 12.10 0.00 0.00 5.03
5258 5733 1.463444 GGTCTTTGTTATTGCGCGAGT 59.537 47.619 12.10 0.00 0.00 4.18
5259 5734 2.669434 GGTCTTTGTTATTGCGCGAGTA 59.331 45.455 12.10 0.00 0.00 2.59
5260 5735 3.123959 GGTCTTTGTTATTGCGCGAGTAA 59.876 43.478 12.10 0.95 40.78 2.24
5262 5737 4.956184 GTCTTTGTTATTGCGCGAGTAATC 59.044 41.667 12.10 0.00 43.00 1.75
5263 5738 3.936902 TTGTTATTGCGCGAGTAATCC 57.063 42.857 12.10 0.00 43.00 3.01
5264 5739 1.855978 TGTTATTGCGCGAGTAATCCG 59.144 47.619 12.10 0.00 43.00 4.18
5265 5740 1.856597 GTTATTGCGCGAGTAATCCGT 59.143 47.619 12.10 0.00 43.00 4.69
5266 5741 3.044986 GTTATTGCGCGAGTAATCCGTA 58.955 45.455 12.10 0.00 43.00 4.02
5267 5742 2.433868 ATTGCGCGAGTAATCCGTAT 57.566 45.000 12.10 0.00 43.00 3.06
5268 5743 1.483316 TTGCGCGAGTAATCCGTATG 58.517 50.000 12.10 0.00 0.00 2.39
5269 5744 0.937699 TGCGCGAGTAATCCGTATGC 60.938 55.000 12.10 0.00 0.00 3.14
5270 5745 1.615107 GCGCGAGTAATCCGTATGCC 61.615 60.000 12.10 0.00 0.00 4.40
5271 5746 1.334992 CGCGAGTAATCCGTATGCCG 61.335 60.000 0.00 0.00 0.00 5.69
5272 5747 0.318445 GCGAGTAATCCGTATGCCGT 60.318 55.000 0.00 0.00 33.66 5.68
5273 5748 1.405461 CGAGTAATCCGTATGCCGTG 58.595 55.000 0.00 0.00 33.66 4.94
5274 5749 1.268896 CGAGTAATCCGTATGCCGTGT 60.269 52.381 0.00 0.00 33.66 4.49
5275 5750 2.031769 CGAGTAATCCGTATGCCGTGTA 60.032 50.000 0.00 0.00 33.66 2.90
5276 5751 3.303406 GAGTAATCCGTATGCCGTGTAC 58.697 50.000 0.00 0.00 33.66 2.90
5277 5752 2.954318 AGTAATCCGTATGCCGTGTACT 59.046 45.455 0.00 0.00 33.66 2.73
5278 5753 2.503920 AATCCGTATGCCGTGTACTC 57.496 50.000 0.00 0.00 33.66 2.59
5279 5754 0.309922 ATCCGTATGCCGTGTACTCG 59.690 55.000 10.28 10.28 33.66 4.18
5289 5764 1.973138 CGTGTACTCGGATCGTTTGT 58.027 50.000 9.41 0.00 0.00 2.83
5290 5765 3.121559 CGTGTACTCGGATCGTTTGTA 57.878 47.619 9.41 0.00 0.00 2.41
5291 5766 3.491356 CGTGTACTCGGATCGTTTGTAA 58.509 45.455 9.41 0.00 0.00 2.41
5292 5767 3.299020 CGTGTACTCGGATCGTTTGTAAC 59.701 47.826 9.41 0.00 0.00 2.50
5293 5768 4.479619 GTGTACTCGGATCGTTTGTAACT 58.520 43.478 0.00 0.00 0.00 2.24
5294 5769 4.919754 GTGTACTCGGATCGTTTGTAACTT 59.080 41.667 0.00 0.00 0.00 2.66
5295 5770 5.403466 GTGTACTCGGATCGTTTGTAACTTT 59.597 40.000 0.00 0.00 0.00 2.66
5296 5771 5.984926 TGTACTCGGATCGTTTGTAACTTTT 59.015 36.000 0.00 0.00 0.00 2.27
5297 5772 5.996669 ACTCGGATCGTTTGTAACTTTTT 57.003 34.783 0.00 0.00 0.00 1.94
5317 5792 4.603231 TTTTTGAGCGTCGTTTGTAACT 57.397 36.364 0.00 0.00 0.00 2.24
5318 5793 5.715429 TTTTTGAGCGTCGTTTGTAACTA 57.285 34.783 0.00 0.00 0.00 2.24
5319 5794 5.715429 TTTTGAGCGTCGTTTGTAACTAA 57.285 34.783 0.00 0.00 0.00 2.24
5320 5795 5.910637 TTTGAGCGTCGTTTGTAACTAAT 57.089 34.783 0.00 0.00 0.00 1.73
5321 5796 5.910637 TTGAGCGTCGTTTGTAACTAATT 57.089 34.783 0.00 0.00 0.00 1.40
5322 5797 5.910637 TGAGCGTCGTTTGTAACTAATTT 57.089 34.783 0.00 0.00 0.00 1.82
5323 5798 6.289745 TGAGCGTCGTTTGTAACTAATTTT 57.710 33.333 0.00 0.00 0.00 1.82
5324 5799 7.405469 TGAGCGTCGTTTGTAACTAATTTTA 57.595 32.000 0.00 0.00 0.00 1.52
5325 5800 8.020861 TGAGCGTCGTTTGTAACTAATTTTAT 57.979 30.769 0.00 0.00 0.00 1.40
5326 5801 8.497554 TGAGCGTCGTTTGTAACTAATTTTATT 58.502 29.630 0.00 0.00 0.00 1.40
5327 5802 8.870242 AGCGTCGTTTGTAACTAATTTTATTC 57.130 30.769 0.00 0.00 0.00 1.75
5328 5803 8.715088 AGCGTCGTTTGTAACTAATTTTATTCT 58.285 29.630 0.00 0.00 0.00 2.40
5329 5804 8.982649 GCGTCGTTTGTAACTAATTTTATTCTC 58.017 33.333 0.00 0.00 0.00 2.87
5350 5825 9.857656 ATTCTCTCTTATTTAATGGATGAAGCA 57.142 29.630 0.00 0.00 0.00 3.91
5351 5826 9.685276 TTCTCTCTTATTTAATGGATGAAGCAA 57.315 29.630 0.00 0.00 0.00 3.91
5352 5827 9.685276 TCTCTCTTATTTAATGGATGAAGCAAA 57.315 29.630 0.00 0.00 0.00 3.68
5353 5828 9.947669 CTCTCTTATTTAATGGATGAAGCAAAG 57.052 33.333 0.00 0.00 0.00 2.77
5354 5829 9.466497 TCTCTTATTTAATGGATGAAGCAAAGT 57.534 29.630 0.00 0.00 0.00 2.66
5360 5835 5.678132 AATGGATGAAGCAAAGTTTTTGC 57.322 34.783 16.48 16.48 45.22 3.68
5361 5836 3.465871 TGGATGAAGCAAAGTTTTTGCC 58.534 40.909 19.55 8.75 45.98 4.52
5362 5837 3.134442 TGGATGAAGCAAAGTTTTTGCCT 59.866 39.130 19.55 9.67 45.98 4.75
5363 5838 3.742882 GGATGAAGCAAAGTTTTTGCCTC 59.257 43.478 19.55 17.11 45.98 4.70
5364 5839 4.502087 GGATGAAGCAAAGTTTTTGCCTCT 60.502 41.667 19.55 7.70 45.98 3.69
5365 5840 3.784338 TGAAGCAAAGTTTTTGCCTCTG 58.216 40.909 19.55 0.00 45.98 3.35
5366 5841 3.195396 TGAAGCAAAGTTTTTGCCTCTGT 59.805 39.130 19.55 1.96 45.98 3.41
5367 5842 3.893326 AGCAAAGTTTTTGCCTCTGTT 57.107 38.095 19.55 1.33 45.98 3.16
5368 5843 5.105554 TGAAGCAAAGTTTTTGCCTCTGTTA 60.106 36.000 19.55 2.02 45.98 2.41
5369 5844 5.337578 AGCAAAGTTTTTGCCTCTGTTAA 57.662 34.783 19.55 0.00 45.98 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.099364 TGTCTTTCTTAGCTTTTCGATCAATT 57.901 30.769 0.00 0.00 0.00 2.32
1 2 7.148340 CCTGTCTTTCTTAGCTTTTCGATCAAT 60.148 37.037 0.00 0.00 0.00 2.57
2 3 6.147821 CCTGTCTTTCTTAGCTTTTCGATCAA 59.852 38.462 0.00 0.00 0.00 2.57
3 4 5.639506 CCTGTCTTTCTTAGCTTTTCGATCA 59.360 40.000 0.00 0.00 0.00 2.92
4 5 5.064071 CCCTGTCTTTCTTAGCTTTTCGATC 59.936 44.000 0.00 0.00 0.00 3.69
5 6 4.938226 CCCTGTCTTTCTTAGCTTTTCGAT 59.062 41.667 0.00 0.00 0.00 3.59
6 7 4.039973 TCCCTGTCTTTCTTAGCTTTTCGA 59.960 41.667 0.00 0.00 0.00 3.71
7 8 4.315803 TCCCTGTCTTTCTTAGCTTTTCG 58.684 43.478 0.00 0.00 0.00 3.46
8 9 4.697828 CCTCCCTGTCTTTCTTAGCTTTTC 59.302 45.833 0.00 0.00 0.00 2.29
9 10 4.351111 TCCTCCCTGTCTTTCTTAGCTTTT 59.649 41.667 0.00 0.00 0.00 2.27
10 11 3.910627 TCCTCCCTGTCTTTCTTAGCTTT 59.089 43.478 0.00 0.00 0.00 3.51
11 12 3.521727 TCCTCCCTGTCTTTCTTAGCTT 58.478 45.455 0.00 0.00 0.00 3.74
12 13 3.191888 TCCTCCCTGTCTTTCTTAGCT 57.808 47.619 0.00 0.00 0.00 3.32
13 14 3.983044 TTCCTCCCTGTCTTTCTTAGC 57.017 47.619 0.00 0.00 0.00 3.09
14 15 4.041691 TGGTTTCCTCCCTGTCTTTCTTAG 59.958 45.833 0.00 0.00 0.00 2.18
15 16 3.977999 TGGTTTCCTCCCTGTCTTTCTTA 59.022 43.478 0.00 0.00 0.00 2.10
16 17 2.783510 TGGTTTCCTCCCTGTCTTTCTT 59.216 45.455 0.00 0.00 0.00 2.52
17 18 2.418669 TGGTTTCCTCCCTGTCTTTCT 58.581 47.619 0.00 0.00 0.00 2.52
18 19 2.951229 TGGTTTCCTCCCTGTCTTTC 57.049 50.000 0.00 0.00 0.00 2.62
19 20 3.680777 TTTGGTTTCCTCCCTGTCTTT 57.319 42.857 0.00 0.00 0.00 2.52
20 21 3.296854 GTTTTGGTTTCCTCCCTGTCTT 58.703 45.455 0.00 0.00 0.00 3.01
21 22 2.748465 CGTTTTGGTTTCCTCCCTGTCT 60.748 50.000 0.00 0.00 0.00 3.41
22 23 1.607148 CGTTTTGGTTTCCTCCCTGTC 59.393 52.381 0.00 0.00 0.00 3.51
23 24 1.064240 ACGTTTTGGTTTCCTCCCTGT 60.064 47.619 0.00 0.00 0.00 4.00
24 25 1.607148 GACGTTTTGGTTTCCTCCCTG 59.393 52.381 0.00 0.00 0.00 4.45
25 26 1.812708 CGACGTTTTGGTTTCCTCCCT 60.813 52.381 0.00 0.00 0.00 4.20
26 27 0.589708 CGACGTTTTGGTTTCCTCCC 59.410 55.000 0.00 0.00 0.00 4.30
27 28 1.585297 TCGACGTTTTGGTTTCCTCC 58.415 50.000 0.00 0.00 0.00 4.30
28 29 3.678915 TTTCGACGTTTTGGTTTCCTC 57.321 42.857 0.00 0.00 0.00 3.71
29 30 4.437772 TTTTTCGACGTTTTGGTTTCCT 57.562 36.364 0.00 0.00 0.00 3.36
57 58 7.378995 GTGTTTTTGGCTTTTTAAACGGTTTTT 59.621 29.630 11.87 0.00 34.16 1.94
58 59 6.856938 GTGTTTTTGGCTTTTTAAACGGTTTT 59.143 30.769 11.87 0.00 34.16 2.43
59 60 6.372185 GTGTTTTTGGCTTTTTAAACGGTTT 58.628 32.000 11.33 11.33 34.16 3.27
60 61 5.389620 CGTGTTTTTGGCTTTTTAAACGGTT 60.390 36.000 0.00 0.00 34.16 4.44
61 62 4.091655 CGTGTTTTTGGCTTTTTAAACGGT 59.908 37.500 0.00 0.00 34.16 4.83
62 63 4.091655 ACGTGTTTTTGGCTTTTTAAACGG 59.908 37.500 0.00 0.00 34.16 4.44
63 64 5.010129 CACGTGTTTTTGGCTTTTTAAACG 58.990 37.500 7.58 0.00 34.16 3.60
64 65 4.784045 GCACGTGTTTTTGGCTTTTTAAAC 59.216 37.500 18.38 0.00 0.00 2.01
65 66 4.434330 CGCACGTGTTTTTGGCTTTTTAAA 60.434 37.500 18.38 0.00 0.00 1.52
66 67 3.060895 CGCACGTGTTTTTGGCTTTTTAA 59.939 39.130 18.38 0.00 0.00 1.52
67 68 2.599082 CGCACGTGTTTTTGGCTTTTTA 59.401 40.909 18.38 0.00 0.00 1.52
68 69 1.391826 CGCACGTGTTTTTGGCTTTTT 59.608 42.857 18.38 0.00 0.00 1.94
69 70 0.995728 CGCACGTGTTTTTGGCTTTT 59.004 45.000 18.38 0.00 0.00 2.27
70 71 0.171455 TCGCACGTGTTTTTGGCTTT 59.829 45.000 18.38 0.00 0.00 3.51
71 72 0.171455 TTCGCACGTGTTTTTGGCTT 59.829 45.000 18.38 0.00 0.00 4.35
72 73 0.171455 TTTCGCACGTGTTTTTGGCT 59.829 45.000 18.38 0.00 0.00 4.75
73 74 0.992802 TTTTCGCACGTGTTTTTGGC 59.007 45.000 18.38 0.00 0.00 4.52
99 100 5.208463 TCTGGGCGCTTCTTTTAATTTTT 57.792 34.783 7.64 0.00 0.00 1.94
100 101 4.809673 CTCTGGGCGCTTCTTTTAATTTT 58.190 39.130 7.64 0.00 0.00 1.82
101 102 3.367395 GCTCTGGGCGCTTCTTTTAATTT 60.367 43.478 7.64 0.00 0.00 1.82
102 103 2.164422 GCTCTGGGCGCTTCTTTTAATT 59.836 45.455 7.64 0.00 0.00 1.40
103 104 1.745653 GCTCTGGGCGCTTCTTTTAAT 59.254 47.619 7.64 0.00 0.00 1.40
104 105 1.165270 GCTCTGGGCGCTTCTTTTAA 58.835 50.000 7.64 0.00 0.00 1.52
105 106 2.854522 GCTCTGGGCGCTTCTTTTA 58.145 52.632 7.64 0.00 0.00 1.52
106 107 3.673599 GCTCTGGGCGCTTCTTTT 58.326 55.556 7.64 0.00 0.00 2.27
124 125 3.109547 TCATTCGCCACGTGTCGC 61.110 61.111 15.09 10.47 0.00 5.19
125 126 1.733041 AGTCATTCGCCACGTGTCG 60.733 57.895 13.61 13.61 0.00 4.35
126 127 0.666274 TCAGTCATTCGCCACGTGTC 60.666 55.000 15.65 0.00 0.00 3.67
127 128 0.667487 CTCAGTCATTCGCCACGTGT 60.667 55.000 15.65 0.00 0.00 4.49
128 129 0.388520 TCTCAGTCATTCGCCACGTG 60.389 55.000 9.08 9.08 0.00 4.49
129 130 0.109086 CTCTCAGTCATTCGCCACGT 60.109 55.000 0.00 0.00 0.00 4.49
130 131 1.416813 GCTCTCAGTCATTCGCCACG 61.417 60.000 0.00 0.00 0.00 4.94
131 132 1.416813 CGCTCTCAGTCATTCGCCAC 61.417 60.000 0.00 0.00 0.00 5.01
132 133 1.153765 CGCTCTCAGTCATTCGCCA 60.154 57.895 0.00 0.00 0.00 5.69
133 134 2.520904 GCGCTCTCAGTCATTCGCC 61.521 63.158 0.00 0.00 37.02 5.54
134 135 2.854214 CGCGCTCTCAGTCATTCGC 61.854 63.158 5.56 0.00 39.26 4.70
135 136 2.854214 GCGCGCTCTCAGTCATTCG 61.854 63.158 26.67 0.00 0.00 3.34
136 137 2.520904 GGCGCGCTCTCAGTCATTC 61.521 63.158 32.29 5.31 0.00 2.67
137 138 2.510238 GGCGCGCTCTCAGTCATT 60.510 61.111 32.29 0.00 0.00 2.57
138 139 2.584261 ATTGGCGCGCTCTCAGTCAT 62.584 55.000 32.29 8.31 0.00 3.06
139 140 2.786539 AATTGGCGCGCTCTCAGTCA 62.787 55.000 32.29 15.77 0.00 3.41
140 141 2.103042 AATTGGCGCGCTCTCAGTC 61.103 57.895 32.29 12.98 0.00 3.51
141 142 2.046892 AATTGGCGCGCTCTCAGT 60.047 55.556 32.29 14.61 0.00 3.41
142 143 2.102438 TCAATTGGCGCGCTCTCAG 61.102 57.895 32.29 18.11 0.00 3.35
143 144 2.047370 TCAATTGGCGCGCTCTCA 60.047 55.556 32.29 18.24 0.00 3.27
144 145 2.401195 GTCAATTGGCGCGCTCTC 59.599 61.111 32.29 15.45 0.00 3.20
145 146 3.490759 CGTCAATTGGCGCGCTCT 61.491 61.111 32.29 13.04 35.94 4.09
152 153 4.983090 CGATCAGCGTCAATTGGC 57.017 55.556 5.42 1.91 34.64 4.52
162 163 2.029904 GAAGCCTCGCAACGATCAGC 62.030 60.000 0.00 0.00 34.61 4.26
163 164 1.424493 GGAAGCCTCGCAACGATCAG 61.424 60.000 0.00 0.00 34.61 2.90
164 165 1.447838 GGAAGCCTCGCAACGATCA 60.448 57.895 0.00 0.00 34.61 2.92
165 166 2.517450 CGGAAGCCTCGCAACGATC 61.517 63.158 0.00 0.00 34.61 3.69
166 167 2.501223 TTCGGAAGCCTCGCAACGAT 62.501 55.000 0.00 0.00 34.61 3.73
167 168 3.215597 TTCGGAAGCCTCGCAACGA 62.216 57.895 0.00 0.00 0.00 3.85
168 169 2.730672 CTTCGGAAGCCTCGCAACG 61.731 63.158 4.57 0.00 0.00 4.10
169 170 2.391389 CCTTCGGAAGCCTCGCAAC 61.391 63.158 12.29 0.00 0.00 4.17
170 171 2.047274 CCTTCGGAAGCCTCGCAA 60.047 61.111 12.29 0.00 0.00 4.85
171 172 2.994995 TCCTTCGGAAGCCTCGCA 60.995 61.111 12.29 0.00 0.00 5.10
172 173 2.202810 CTCCTTCGGAAGCCTCGC 60.203 66.667 12.29 0.00 0.00 5.03
173 174 2.202810 GCTCCTTCGGAAGCCTCG 60.203 66.667 12.29 0.00 0.00 4.63
174 175 2.202810 CGCTCCTTCGGAAGCCTC 60.203 66.667 12.29 2.39 0.00 4.70
175 176 4.459089 GCGCTCCTTCGGAAGCCT 62.459 66.667 12.29 0.00 32.03 4.58
176 177 4.459089 AGCGCTCCTTCGGAAGCC 62.459 66.667 2.64 2.30 36.52 4.35
177 178 2.888051 GAGCGCTCCTTCGGAAGC 60.888 66.667 27.22 1.06 36.25 3.86
178 179 2.580867 CGAGCGCTCCTTCGGAAG 60.581 66.667 30.66 10.96 0.00 3.46
179 180 1.588824 TAACGAGCGCTCCTTCGGAA 61.589 55.000 30.66 10.15 0.00 4.30
180 181 1.588824 TTAACGAGCGCTCCTTCGGA 61.589 55.000 30.66 12.50 0.00 4.55
181 182 1.153901 TTAACGAGCGCTCCTTCGG 60.154 57.895 30.66 18.71 0.00 4.30
182 183 0.456312 AGTTAACGAGCGCTCCTTCG 60.456 55.000 30.66 22.24 0.00 3.79
183 184 2.452105 CTAGTTAACGAGCGCTCCTTC 58.548 52.381 30.66 14.44 0.00 3.46
184 185 1.469423 GCTAGTTAACGAGCGCTCCTT 60.469 52.381 30.66 26.03 35.06 3.36
185 186 0.100861 GCTAGTTAACGAGCGCTCCT 59.899 55.000 30.66 22.52 35.06 3.69
186 187 0.870735 GGCTAGTTAACGAGCGCTCC 60.871 60.000 30.66 16.60 44.07 4.70
187 188 1.201098 CGGCTAGTTAACGAGCGCTC 61.201 60.000 27.64 27.64 44.07 5.03
188 189 1.226603 CGGCTAGTTAACGAGCGCT 60.227 57.895 27.40 11.27 44.07 5.92
189 190 2.857415 GCGGCTAGTTAACGAGCGC 61.857 63.158 27.40 27.18 44.07 5.92
190 191 1.201098 GAGCGGCTAGTTAACGAGCG 61.201 60.000 27.40 23.26 44.07 5.03
191 192 0.870735 GGAGCGGCTAGTTAACGAGC 60.871 60.000 26.90 26.90 42.71 5.03
192 193 0.248949 GGGAGCGGCTAGTTAACGAG 60.249 60.000 11.04 11.04 0.00 4.18
193 194 1.811860 GGGAGCGGCTAGTTAACGA 59.188 57.895 0.60 0.00 0.00 3.85
194 195 1.588139 CGGGAGCGGCTAGTTAACG 60.588 63.158 0.60 0.00 0.00 3.18
195 196 0.248949 CTCGGGAGCGGCTAGTTAAC 60.249 60.000 0.60 0.00 0.00 2.01
196 197 0.394762 TCTCGGGAGCGGCTAGTTAA 60.395 55.000 0.60 0.00 0.00 2.01
197 198 0.394762 TTCTCGGGAGCGGCTAGTTA 60.395 55.000 0.60 0.00 0.00 2.24
198 199 1.255667 TTTCTCGGGAGCGGCTAGTT 61.256 55.000 0.60 0.00 0.00 2.24
199 200 1.681327 TTTCTCGGGAGCGGCTAGT 60.681 57.895 0.60 0.00 0.00 2.57
200 201 1.227002 GTTTCTCGGGAGCGGCTAG 60.227 63.158 0.60 0.00 0.00 3.42
201 202 2.718073 GGTTTCTCGGGAGCGGCTA 61.718 63.158 0.60 0.00 0.00 3.93
202 203 4.083862 GGTTTCTCGGGAGCGGCT 62.084 66.667 0.00 0.00 0.00 5.52
203 204 4.083862 AGGTTTCTCGGGAGCGGC 62.084 66.667 0.00 0.00 0.00 6.53
204 205 2.184579 GAGGTTTCTCGGGAGCGG 59.815 66.667 0.00 0.00 0.00 5.52
205 206 2.184579 GGAGGTTTCTCGGGAGCG 59.815 66.667 0.00 0.00 40.85 5.03
206 207 1.219393 CAGGAGGTTTCTCGGGAGC 59.781 63.158 0.00 0.00 40.85 4.70
207 208 1.219393 GCAGGAGGTTTCTCGGGAG 59.781 63.158 0.00 0.00 40.85 4.30
208 209 1.229209 AGCAGGAGGTTTCTCGGGA 60.229 57.895 0.00 0.00 40.85 5.14
209 210 1.219393 GAGCAGGAGGTTTCTCGGG 59.781 63.158 0.00 0.00 40.85 5.14
210 211 0.174617 GAGAGCAGGAGGTTTCTCGG 59.825 60.000 0.00 0.00 40.85 4.63
211 212 1.134175 GAGAGAGCAGGAGGTTTCTCG 59.866 57.143 0.00 0.00 41.61 4.04
212 213 2.959507 GAGAGAGCAGGAGGTTTCTC 57.040 55.000 0.00 0.00 43.36 2.87
213 214 2.621556 AGAGAGAGCAGGAGGTTTCT 57.378 50.000 0.00 0.00 39.16 2.52
214 215 4.464597 TCTTTAGAGAGAGCAGGAGGTTTC 59.535 45.833 0.00 0.00 0.00 2.78
215 216 4.421131 TCTTTAGAGAGAGCAGGAGGTTT 58.579 43.478 0.00 0.00 0.00 3.27
216 217 4.054359 TCTTTAGAGAGAGCAGGAGGTT 57.946 45.455 0.00 0.00 0.00 3.50
217 218 3.748645 TCTTTAGAGAGAGCAGGAGGT 57.251 47.619 0.00 0.00 0.00 3.85
218 219 5.612725 AATTCTTTAGAGAGAGCAGGAGG 57.387 43.478 0.00 0.00 32.44 4.30
219 220 7.581213 TCTAATTCTTTAGAGAGAGCAGGAG 57.419 40.000 0.00 0.00 39.09 3.69
230 231 5.105310 AGCCTCGCAACTCTAATTCTTTAGA 60.105 40.000 0.00 0.00 41.18 2.10
231 232 5.112686 AGCCTCGCAACTCTAATTCTTTAG 58.887 41.667 0.00 0.00 36.87 1.85
232 233 5.086104 AGCCTCGCAACTCTAATTCTTTA 57.914 39.130 0.00 0.00 0.00 1.85
233 234 3.935828 GAGCCTCGCAACTCTAATTCTTT 59.064 43.478 0.00 0.00 0.00 2.52
234 235 3.526534 GAGCCTCGCAACTCTAATTCTT 58.473 45.455 0.00 0.00 0.00 2.52
235 236 2.480416 CGAGCCTCGCAACTCTAATTCT 60.480 50.000 0.00 0.00 31.14 2.40
236 237 1.855360 CGAGCCTCGCAACTCTAATTC 59.145 52.381 0.00 0.00 31.14 2.17
237 238 1.927895 CGAGCCTCGCAACTCTAATT 58.072 50.000 0.00 0.00 31.14 1.40
307 700 1.148310 CGCAGTCGGCCCATTATTAG 58.852 55.000 0.00 0.00 40.31 1.73
329 722 3.857038 GGCCTATTCACCGGGCGA 61.857 66.667 6.32 0.00 46.10 5.54
430 823 2.356382 AGGAAGAAGCAGTCGATACTCG 59.644 50.000 0.00 0.00 42.10 4.18
479 872 2.202932 CGGCTCCGGTGATTCCAG 60.203 66.667 7.92 0.00 35.57 3.86
553 946 1.690985 GGGGTGAAGAGGAGGAGGG 60.691 68.421 0.00 0.00 0.00 4.30
757 1158 1.223487 GCGCATACAAAGGGGAGGA 59.777 57.895 0.30 0.00 0.00 3.71
780 1181 4.439253 AGGCTAGATGGGTGTTTATTCC 57.561 45.455 0.00 0.00 0.00 3.01
834 1236 3.313526 CAGGACGCCAAATTTCTATCAGG 59.686 47.826 0.00 0.00 0.00 3.86
996 1398 0.038744 AACTCAGCCCCACCATCTTG 59.961 55.000 0.00 0.00 0.00 3.02
1004 1406 1.455849 CTTGTCCAACTCAGCCCCA 59.544 57.895 0.00 0.00 0.00 4.96
1052 1454 2.594303 CAGCCGGGTGCAAGAACA 60.594 61.111 22.48 0.00 44.83 3.18
1125 1527 2.845659 ACATGAACAGTATCCCCCTCA 58.154 47.619 0.00 0.00 0.00 3.86
1261 1664 7.977818 AGCATCTAAGTAACCATTGGATGATA 58.022 34.615 10.37 0.00 44.12 2.15
1285 1688 7.149973 CCTTTGATACCCAATAATGCATCAAG 58.850 38.462 0.00 0.00 33.32 3.02
1311 1714 4.993029 ACATTCTAGTAGACTGTGCCTC 57.007 45.455 19.25 0.00 36.85 4.70
1399 1802 1.460504 TGTCCGCGTCTCTTGAGTAT 58.539 50.000 4.92 0.00 0.00 2.12
1402 1805 1.497991 TTTTGTCCGCGTCTCTTGAG 58.502 50.000 4.92 0.00 0.00 3.02
1449 1852 8.911918 ATGTAGTACTTCAAATACCAACACAA 57.088 30.769 6.27 0.00 0.00 3.33
1493 1896 9.918630 ATGAATGACTAAAAGAATCAAAACTGG 57.081 29.630 0.00 0.00 0.00 4.00
1548 1958 9.793259 TCAAGAAATCCTACATGTTAAAGACTT 57.207 29.630 2.30 0.09 0.00 3.01
1549 1959 9.793259 TTCAAGAAATCCTACATGTTAAAGACT 57.207 29.630 2.30 0.00 0.00 3.24
1558 1968 9.674824 GCATCTTAATTCAAGAAATCCTACATG 57.325 33.333 0.00 0.00 46.29 3.21
1559 1969 9.412460 TGCATCTTAATTCAAGAAATCCTACAT 57.588 29.630 0.00 0.00 46.29 2.29
1560 1970 8.806429 TGCATCTTAATTCAAGAAATCCTACA 57.194 30.769 0.00 0.00 46.29 2.74
1561 1971 9.113838 TCTGCATCTTAATTCAAGAAATCCTAC 57.886 33.333 0.00 0.00 46.29 3.18
1562 1972 9.113838 GTCTGCATCTTAATTCAAGAAATCCTA 57.886 33.333 0.00 0.00 46.29 2.94
1563 1973 7.833183 AGTCTGCATCTTAATTCAAGAAATCCT 59.167 33.333 0.00 0.00 46.29 3.24
1564 1974 7.994194 AGTCTGCATCTTAATTCAAGAAATCC 58.006 34.615 0.00 0.00 46.29 3.01
1565 1975 9.928236 GTAGTCTGCATCTTAATTCAAGAAATC 57.072 33.333 0.00 0.00 46.29 2.17
1566 1976 9.678260 AGTAGTCTGCATCTTAATTCAAGAAAT 57.322 29.630 0.00 0.00 46.29 2.17
1579 1989 4.895889 TGCCATAGTTAGTAGTCTGCATCT 59.104 41.667 0.00 0.00 0.00 2.90
1610 2023 8.408601 CCTCACACCTTATTCCTTCATTATTTG 58.591 37.037 0.00 0.00 0.00 2.32
1654 2067 5.990745 AAATAATGTCGTGCATGTTTTCG 57.009 34.783 5.68 0.00 37.96 3.46
1721 2145 0.179045 CGCCTGCCTAAGCACCTAAT 60.179 55.000 0.00 0.00 46.52 1.73
1743 2167 1.074248 AAACCGCCCTAACACCCAG 59.926 57.895 0.00 0.00 0.00 4.45
1745 2169 1.228337 ACAAACCGCCCTAACACCC 60.228 57.895 0.00 0.00 0.00 4.61
1901 2325 2.981859 AGCGACAAGTAATTCCGGAT 57.018 45.000 4.15 0.00 0.00 4.18
1925 2349 7.948357 ACGTATTTTAGTGCTAGATACATCCA 58.052 34.615 0.00 0.00 0.00 3.41
1949 2373 4.036027 TCGGTCAAACGGATGTATCTAGAC 59.964 45.833 0.00 0.00 0.00 2.59
1969 2393 0.886563 AGTCCGGAACTACTTGTCGG 59.113 55.000 5.23 0.00 36.07 4.79
1979 2403 3.889520 ATTACTTCCTCAGTCCGGAAC 57.110 47.619 5.23 0.00 35.70 3.62
2107 2531 3.701542 TGCACTATCAAGTACTCCCTCTG 59.298 47.826 0.00 0.00 33.48 3.35
2108 2532 3.702045 GTGCACTATCAAGTACTCCCTCT 59.298 47.826 10.32 0.00 33.48 3.69
2109 2533 3.702045 AGTGCACTATCAAGTACTCCCTC 59.298 47.826 20.16 0.00 33.48 4.30
2110 2534 3.714144 AGTGCACTATCAAGTACTCCCT 58.286 45.455 20.16 0.00 33.48 4.20
2111 2535 4.184629 CAAGTGCACTATCAAGTACTCCC 58.815 47.826 22.01 0.00 33.48 4.30
2112 2536 3.619038 GCAAGTGCACTATCAAGTACTCC 59.381 47.826 22.01 0.00 41.59 3.85
2113 2537 4.499183 AGCAAGTGCACTATCAAGTACTC 58.501 43.478 22.01 0.26 45.16 2.59
2114 2538 4.221703 AGAGCAAGTGCACTATCAAGTACT 59.778 41.667 22.01 2.73 45.16 2.73
2115 2539 4.499183 AGAGCAAGTGCACTATCAAGTAC 58.501 43.478 22.01 6.73 45.16 2.73
2116 2540 4.220602 TGAGAGCAAGTGCACTATCAAGTA 59.779 41.667 22.01 2.34 41.91 2.24
2117 2541 3.007290 TGAGAGCAAGTGCACTATCAAGT 59.993 43.478 22.01 0.00 41.91 3.16
2197 2625 1.133792 GCCAGTATAGGGGTGTTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
2210 2638 3.260128 GCCTTATAACCGGTAGCCAGTAT 59.740 47.826 8.00 3.11 0.00 2.12
2288 2716 0.875059 AGTGCGCAGGAAAAACTAGC 59.125 50.000 12.22 0.00 0.00 3.42
2347 2776 2.181975 CAATTTGAGAATGGGTGGCCT 58.818 47.619 3.32 0.00 0.00 5.19
2381 2810 2.152016 AGGAACCTCAAAGTTAAGCGC 58.848 47.619 0.00 0.00 0.00 5.92
2434 2863 9.372369 GGATTAATAGGCTACTCATATCAACAC 57.628 37.037 0.00 0.00 0.00 3.32
2460 2889 6.601613 TGTGCCTAAAACATCCAGGTTAATAG 59.398 38.462 0.00 0.00 0.00 1.73
2477 2906 6.096423 ACGACTTGTATCTTCTATGTGCCTAA 59.904 38.462 0.00 0.00 0.00 2.69
2493 2922 9.647797 AATGAATACAATACTGAACGACTTGTA 57.352 29.630 0.00 0.00 36.89 2.41
2573 3002 9.521841 CAGTTAATATGGATAGGAGAGAGTACA 57.478 37.037 0.00 0.00 0.00 2.90
2597 3026 5.839262 TTGTTGTACTAAATCAGCGACAG 57.161 39.130 0.00 0.00 0.00 3.51
2628 3076 2.139323 AAAAAGTATTCCCTCCGGCC 57.861 50.000 0.00 0.00 0.00 6.13
2660 3108 9.807649 AGTTATTAGCAAATAAAAGCAAGGATG 57.192 29.630 0.00 0.00 38.86 3.51
2771 3222 3.633418 ACTCGGAACTACTCTAGCCAAT 58.367 45.455 0.00 0.00 0.00 3.16
2774 3225 4.070630 TCTACTCGGAACTACTCTAGCC 57.929 50.000 0.00 0.00 0.00 3.93
2788 3239 6.677781 TTTATTCAAAAGGCCATCTACTCG 57.322 37.500 5.01 0.00 0.00 4.18
2812 3273 7.069877 TCCCAAGCAGAACTACTTTAACTTA 57.930 36.000 0.00 0.00 0.00 2.24
2927 3389 5.647658 CAGTTGCATAAACAGGGAGATAACA 59.352 40.000 0.00 0.00 41.61 2.41
2933 3395 2.927553 GCAGTTGCATAAACAGGGAG 57.072 50.000 0.00 0.00 41.61 4.30
3118 3580 1.482593 ACGGACTTGAGCTCCATTAGG 59.517 52.381 12.15 0.00 0.00 2.69
3144 3606 8.184848 TCAAATTTGTCACTAATTTTGTCACGA 58.815 29.630 17.47 0.00 34.01 4.35
3342 3811 3.561725 CCAGGAAAAGACAAGAGTGACAC 59.438 47.826 0.00 0.00 0.00 3.67
3343 3812 3.454447 TCCAGGAAAAGACAAGAGTGACA 59.546 43.478 0.00 0.00 0.00 3.58
3349 3818 4.722526 TCCATTCCAGGAAAAGACAAGA 57.277 40.909 5.81 0.00 33.93 3.02
3666 4135 3.733337 GGGTGACATACATGACATCCTC 58.267 50.000 14.30 0.00 45.88 3.71
3681 4150 2.432628 CTCGAACGCAGGGGTGAC 60.433 66.667 0.00 0.00 0.00 3.67
3736 4206 2.763448 AGAGTGAAGTCTATCAGGGCAC 59.237 50.000 0.00 0.00 0.00 5.01
3742 4212 3.634448 GGCTGCTAGAGTGAAGTCTATCA 59.366 47.826 0.00 0.00 0.00 2.15
3765 4235 9.737427 TTAAATTTACGAGAAATTCAACTTGCA 57.263 25.926 11.40 0.00 0.00 4.08
3774 4244 7.882179 ACTGCAGGTTAAATTTACGAGAAATT 58.118 30.769 19.93 6.88 0.00 1.82
3776 4246 6.072893 GGACTGCAGGTTAAATTTACGAGAAA 60.073 38.462 19.93 0.00 0.00 2.52
3820 4290 8.440771 CCATCCTCATTTAGGTAAGATTAGGTT 58.559 37.037 0.00 0.00 46.62 3.50
3853 4323 2.238530 CTCCTACGGAGGGGGTAGA 58.761 63.158 15.51 0.00 45.43 2.59
3867 4337 1.698532 CTGGCATAATGCTCCTCTCCT 59.301 52.381 0.00 0.00 44.28 3.69
3909 4379 2.772515 AGTAAAGTCTACCTGGGCATCC 59.227 50.000 0.00 0.00 0.00 3.51
3973 4444 2.222027 CTTGTTCTGGTGGACTTGGAC 58.778 52.381 0.00 0.00 0.00 4.02
4107 4578 8.191446 GCTCATACACTGAAGTTCTAGTTATCA 58.809 37.037 4.17 0.00 32.14 2.15
4116 4587 5.007136 GGCATAAGCTCATACACTGAAGTTC 59.993 44.000 0.00 0.00 41.70 3.01
4121 4592 3.742327 GCTGGCATAAGCTCATACACTGA 60.742 47.826 0.00 0.00 40.20 3.41
4194 4665 3.263425 ACGTGGTTAGATGACAAAGGGAT 59.737 43.478 0.00 0.00 0.00 3.85
4207 4678 1.195448 CAGCAGCAAAGACGTGGTTAG 59.805 52.381 0.00 0.00 0.00 2.34
4217 4688 3.121934 TGCACCACAGCAGCAAAG 58.878 55.556 0.00 0.00 40.11 2.77
4273 4744 1.493311 CACAGCCGACTCGAAAAGC 59.507 57.895 0.00 0.00 0.00 3.51
4427 4898 2.064434 TCCACAAACAAGTGATGGCA 57.936 45.000 0.00 0.00 42.05 4.92
4524 4995 6.127591 GGCGAATATGGATATCAGTCAGTACT 60.128 42.308 4.83 0.00 35.91 2.73
4525 4996 6.037098 GGCGAATATGGATATCAGTCAGTAC 58.963 44.000 4.83 0.00 0.00 2.73
4526 4997 5.714806 TGGCGAATATGGATATCAGTCAGTA 59.285 40.000 4.83 0.00 0.00 2.74
4527 4998 4.528206 TGGCGAATATGGATATCAGTCAGT 59.472 41.667 4.83 0.00 0.00 3.41
4559 5030 3.554960 GGTCAGGGGAAAACAGAAAATGC 60.555 47.826 0.00 0.00 0.00 3.56
4614 5085 3.314635 GCCATCTCGATGAAAATCAGCTT 59.685 43.478 8.42 0.00 41.20 3.74
4631 5102 1.812571 ACAACTTCGGAACATGCCATC 59.187 47.619 0.00 0.00 0.00 3.51
4643 5114 4.539870 TCGTTTCTACCAGTACAACTTCG 58.460 43.478 0.00 0.00 0.00 3.79
4757 5228 2.202623 GCTACTGTGACGGCGAGG 60.203 66.667 16.62 0.63 0.00 4.63
4767 5238 3.964031 CCTCTTCCTCTTATGGCTACTGT 59.036 47.826 0.00 0.00 0.00 3.55
4777 5248 4.383118 CGCCTTCAATTCCTCTTCCTCTTA 60.383 45.833 0.00 0.00 0.00 2.10
4816 5287 1.694150 CAAAGGGAGTGACAGACAGGA 59.306 52.381 0.00 0.00 0.00 3.86
4935 5406 0.391661 TGATTTCAGCTGCCGTCTCC 60.392 55.000 9.47 0.00 0.00 3.71
5046 5521 7.350467 CGCGTTTCTTCTGTATGTAGAGTATA 58.650 38.462 0.00 0.00 0.00 1.47
5047 5522 6.200100 CGCGTTTCTTCTGTATGTAGAGTAT 58.800 40.000 0.00 0.00 0.00 2.12
5048 5523 5.566623 CGCGTTTCTTCTGTATGTAGAGTA 58.433 41.667 0.00 0.00 0.00 2.59
5049 5524 4.413087 CGCGTTTCTTCTGTATGTAGAGT 58.587 43.478 0.00 0.00 0.00 3.24
5050 5525 3.240861 GCGCGTTTCTTCTGTATGTAGAG 59.759 47.826 8.43 0.00 0.00 2.43
5051 5526 3.119602 AGCGCGTTTCTTCTGTATGTAGA 60.120 43.478 8.43 0.00 0.00 2.59
5052 5527 3.179830 AGCGCGTTTCTTCTGTATGTAG 58.820 45.455 8.43 0.00 0.00 2.74
5053 5528 3.176708 GAGCGCGTTTCTTCTGTATGTA 58.823 45.455 8.43 0.00 0.00 2.29
5054 5529 1.993370 GAGCGCGTTTCTTCTGTATGT 59.007 47.619 8.43 0.00 0.00 2.29
5055 5530 1.007011 CGAGCGCGTTTCTTCTGTATG 60.007 52.381 8.43 0.00 0.00 2.39
5056 5531 1.269166 CGAGCGCGTTTCTTCTGTAT 58.731 50.000 8.43 0.00 0.00 2.29
5057 5532 2.720688 CGAGCGCGTTTCTTCTGTA 58.279 52.632 8.43 0.00 0.00 2.74
5058 5533 3.538841 CGAGCGCGTTTCTTCTGT 58.461 55.556 8.43 0.00 0.00 3.41
5068 5543 1.442857 GAGGGATCATACGAGCGCG 60.443 63.158 8.75 8.75 44.56 6.86
5069 5544 1.080434 GGAGGGATCATACGAGCGC 60.080 63.158 0.00 0.00 40.56 5.92
5070 5545 0.673985 TTGGAGGGATCATACGAGCG 59.326 55.000 0.00 0.00 0.00 5.03
5071 5546 1.001406 CCTTGGAGGGATCATACGAGC 59.999 57.143 0.00 0.00 0.00 5.03
5072 5547 1.001406 GCCTTGGAGGGATCATACGAG 59.999 57.143 0.00 0.00 35.37 4.18
5073 5548 1.048601 GCCTTGGAGGGATCATACGA 58.951 55.000 0.00 0.00 35.37 3.43
5074 5549 0.758734 TGCCTTGGAGGGATCATACG 59.241 55.000 0.00 0.00 35.37 3.06
5081 5556 1.694169 GAGGGATGCCTTGGAGGGA 60.694 63.158 7.42 0.00 41.08 4.20
5082 5557 1.358830 ATGAGGGATGCCTTGGAGGG 61.359 60.000 7.42 0.00 35.37 4.30
5083 5558 0.110104 GATGAGGGATGCCTTGGAGG 59.890 60.000 7.42 0.00 38.80 4.30
5084 5559 0.841961 TGATGAGGGATGCCTTGGAG 59.158 55.000 7.42 0.00 0.00 3.86
5085 5560 1.144298 CATGATGAGGGATGCCTTGGA 59.856 52.381 7.42 0.00 0.00 3.53
5086 5561 1.617322 CATGATGAGGGATGCCTTGG 58.383 55.000 7.42 0.00 0.00 3.61
5087 5562 0.959553 GCATGATGAGGGATGCCTTG 59.040 55.000 7.42 1.87 39.29 3.61
5088 5563 0.851469 AGCATGATGAGGGATGCCTT 59.149 50.000 7.42 0.00 45.13 4.35
5089 5564 0.851469 AAGCATGATGAGGGATGCCT 59.149 50.000 4.97 4.97 45.13 4.75
5090 5565 0.959553 CAAGCATGATGAGGGATGCC 59.040 55.000 0.00 0.00 45.13 4.40
5091 5566 1.688772 ACAAGCATGATGAGGGATGC 58.311 50.000 0.00 0.00 44.49 3.91
5092 5567 3.697542 TGAAACAAGCATGATGAGGGATG 59.302 43.478 0.00 0.00 0.00 3.51
5093 5568 3.972133 TGAAACAAGCATGATGAGGGAT 58.028 40.909 0.00 0.00 0.00 3.85
5094 5569 3.438216 TGAAACAAGCATGATGAGGGA 57.562 42.857 0.00 0.00 0.00 4.20
5095 5570 3.181479 CCATGAAACAAGCATGATGAGGG 60.181 47.826 0.00 0.00 44.49 4.30
5096 5571 3.697542 TCCATGAAACAAGCATGATGAGG 59.302 43.478 0.00 0.00 44.49 3.86
5097 5572 4.157105 TGTCCATGAAACAAGCATGATGAG 59.843 41.667 0.00 0.00 44.49 2.90
5098 5573 4.080687 TGTCCATGAAACAAGCATGATGA 58.919 39.130 0.00 0.00 44.49 2.92
5099 5574 4.443913 TGTCCATGAAACAAGCATGATG 57.556 40.909 0.00 0.00 44.49 3.07
5100 5575 5.670792 ATTGTCCATGAAACAAGCATGAT 57.329 34.783 15.71 0.00 44.49 2.45
5101 5576 5.471556 AATTGTCCATGAAACAAGCATGA 57.528 34.783 15.71 0.00 44.49 3.07
5102 5577 5.697178 TCAAATTGTCCATGAAACAAGCATG 59.303 36.000 15.71 13.75 39.78 4.06
5103 5578 5.856156 TCAAATTGTCCATGAAACAAGCAT 58.144 33.333 15.71 5.73 39.78 3.79
5104 5579 5.273674 TCAAATTGTCCATGAAACAAGCA 57.726 34.783 15.71 0.00 39.78 3.91
5105 5580 6.601741 TTTCAAATTGTCCATGAAACAAGC 57.398 33.333 15.71 0.00 39.78 4.01
5106 5581 8.367943 TCATTTCAAATTGTCCATGAAACAAG 57.632 30.769 15.71 6.22 43.50 3.16
5107 5582 7.041916 GCTCATTTCAAATTGTCCATGAAACAA 60.042 33.333 13.71 13.71 43.50 2.83
5108 5583 6.424509 GCTCATTTCAAATTGTCCATGAAACA 59.575 34.615 4.75 0.00 43.50 2.83
5109 5584 6.400303 CGCTCATTTCAAATTGTCCATGAAAC 60.400 38.462 4.75 0.00 43.50 2.78
5110 5585 5.634439 CGCTCATTTCAAATTGTCCATGAAA 59.366 36.000 5.05 5.05 44.44 2.69
5111 5586 5.048154 TCGCTCATTTCAAATTGTCCATGAA 60.048 36.000 0.00 0.00 0.00 2.57
5112 5587 4.458642 TCGCTCATTTCAAATTGTCCATGA 59.541 37.500 0.00 0.00 0.00 3.07
5113 5588 4.735985 TCGCTCATTTCAAATTGTCCATG 58.264 39.130 0.00 0.00 0.00 3.66
5114 5589 5.389859 TTCGCTCATTTCAAATTGTCCAT 57.610 34.783 0.00 0.00 0.00 3.41
5115 5590 4.844998 TTCGCTCATTTCAAATTGTCCA 57.155 36.364 0.00 0.00 0.00 4.02
5116 5591 4.088496 CGTTTCGCTCATTTCAAATTGTCC 59.912 41.667 0.00 0.00 0.00 4.02
5117 5592 4.675114 ACGTTTCGCTCATTTCAAATTGTC 59.325 37.500 0.00 0.00 0.00 3.18
5118 5593 4.440758 CACGTTTCGCTCATTTCAAATTGT 59.559 37.500 0.00 0.00 0.00 2.71
5119 5594 4.661402 GCACGTTTCGCTCATTTCAAATTG 60.661 41.667 0.00 0.00 0.00 2.32
5120 5595 3.425193 GCACGTTTCGCTCATTTCAAATT 59.575 39.130 0.00 0.00 0.00 1.82
5121 5596 2.979813 GCACGTTTCGCTCATTTCAAAT 59.020 40.909 0.00 0.00 0.00 2.32
5122 5597 2.380660 GCACGTTTCGCTCATTTCAAA 58.619 42.857 0.00 0.00 0.00 2.69
5123 5598 1.658931 CGCACGTTTCGCTCATTTCAA 60.659 47.619 0.00 0.00 0.00 2.69
5124 5599 0.110867 CGCACGTTTCGCTCATTTCA 60.111 50.000 0.00 0.00 0.00 2.69
5125 5600 0.162933 TCGCACGTTTCGCTCATTTC 59.837 50.000 2.38 0.00 0.00 2.17
5126 5601 0.163788 CTCGCACGTTTCGCTCATTT 59.836 50.000 2.38 0.00 0.00 2.32
5127 5602 0.944311 ACTCGCACGTTTCGCTCATT 60.944 50.000 2.38 0.00 0.00 2.57
5128 5603 0.944311 AACTCGCACGTTTCGCTCAT 60.944 50.000 2.38 0.00 0.00 2.90
5129 5604 1.149361 AAACTCGCACGTTTCGCTCA 61.149 50.000 2.38 0.00 31.87 4.26
5130 5605 0.042448 AAAACTCGCACGTTTCGCTC 60.042 50.000 2.38 0.00 36.16 5.03
5131 5606 0.042448 GAAAACTCGCACGTTTCGCT 60.042 50.000 2.38 0.00 36.16 4.93
5132 5607 0.315544 TGAAAACTCGCACGTTTCGC 60.316 50.000 2.38 0.00 36.16 4.70
5133 5608 1.647748 CTGAAAACTCGCACGTTTCG 58.352 50.000 0.89 0.89 36.16 3.46
5134 5609 1.920272 GCCTGAAAACTCGCACGTTTC 60.920 52.381 1.39 0.00 36.16 2.78
5135 5610 0.028902 GCCTGAAAACTCGCACGTTT 59.971 50.000 0.00 0.00 38.66 3.60
5136 5611 1.092921 TGCCTGAAAACTCGCACGTT 61.093 50.000 0.00 0.00 0.00 3.99
5137 5612 0.884704 ATGCCTGAAAACTCGCACGT 60.885 50.000 0.00 0.00 33.31 4.49
5138 5613 0.238289 AATGCCTGAAAACTCGCACG 59.762 50.000 0.00 0.00 33.31 5.34
5139 5614 2.484264 ACTAATGCCTGAAAACTCGCAC 59.516 45.455 0.00 0.00 33.31 5.34
5140 5615 2.483877 CACTAATGCCTGAAAACTCGCA 59.516 45.455 0.00 0.00 35.35 5.10
5141 5616 2.484264 ACACTAATGCCTGAAAACTCGC 59.516 45.455 0.00 0.00 0.00 5.03
5142 5617 3.498397 ACACACTAATGCCTGAAAACTCG 59.502 43.478 0.00 0.00 0.00 4.18
5143 5618 4.083271 GGACACACTAATGCCTGAAAACTC 60.083 45.833 0.00 0.00 0.00 3.01
5144 5619 3.821033 GGACACACTAATGCCTGAAAACT 59.179 43.478 0.00 0.00 0.00 2.66
5145 5620 3.057526 GGGACACACTAATGCCTGAAAAC 60.058 47.826 0.00 0.00 0.00 2.43
5146 5621 3.153919 GGGACACACTAATGCCTGAAAA 58.846 45.455 0.00 0.00 0.00 2.29
5147 5622 2.375174 AGGGACACACTAATGCCTGAAA 59.625 45.455 0.00 0.00 0.00 2.69
5148 5623 1.985159 AGGGACACACTAATGCCTGAA 59.015 47.619 0.00 0.00 0.00 3.02
5149 5624 1.555075 GAGGGACACACTAATGCCTGA 59.445 52.381 0.00 0.00 0.00 3.86
5150 5625 1.407437 GGAGGGACACACTAATGCCTG 60.407 57.143 0.00 0.00 0.00 4.85
5151 5626 0.912486 GGAGGGACACACTAATGCCT 59.088 55.000 0.00 0.00 0.00 4.75
5152 5627 0.462047 CGGAGGGACACACTAATGCC 60.462 60.000 0.00 0.00 0.00 4.40
5153 5628 0.535335 TCGGAGGGACACACTAATGC 59.465 55.000 0.00 0.00 0.00 3.56
5154 5629 2.295253 GTCGGAGGGACACACTAATG 57.705 55.000 0.00 0.00 45.36 1.90
5163 5638 2.262915 CAGCACTGTCGGAGGGAC 59.737 66.667 0.00 0.00 46.27 4.46
5164 5639 3.695606 GCAGCACTGTCGGAGGGA 61.696 66.667 0.00 0.00 0.00 4.20
5165 5640 2.738213 AAAGCAGCACTGTCGGAGGG 62.738 60.000 0.00 0.00 0.00 4.30
5166 5641 1.294659 GAAAGCAGCACTGTCGGAGG 61.295 60.000 0.00 0.00 0.00 4.30
5167 5642 1.294659 GGAAAGCAGCACTGTCGGAG 61.295 60.000 0.00 0.00 32.77 4.63
5168 5643 1.301716 GGAAAGCAGCACTGTCGGA 60.302 57.895 0.00 0.00 32.77 4.55
5169 5644 1.294659 GAGGAAAGCAGCACTGTCGG 61.295 60.000 0.00 0.00 32.77 4.79
5170 5645 1.294659 GGAGGAAAGCAGCACTGTCG 61.295 60.000 0.00 0.00 32.77 4.35
5171 5646 0.250467 TGGAGGAAAGCAGCACTGTC 60.250 55.000 0.00 0.00 30.94 3.51
5172 5647 0.403271 ATGGAGGAAAGCAGCACTGT 59.597 50.000 0.00 0.00 0.00 3.55
5173 5648 1.093159 GATGGAGGAAAGCAGCACTG 58.907 55.000 0.00 0.00 0.00 3.66
5174 5649 0.392193 CGATGGAGGAAAGCAGCACT 60.392 55.000 0.00 0.00 0.00 4.40
5175 5650 1.986575 GCGATGGAGGAAAGCAGCAC 61.987 60.000 0.00 0.00 0.00 4.40
5176 5651 1.746615 GCGATGGAGGAAAGCAGCA 60.747 57.895 0.00 0.00 0.00 4.41
5177 5652 2.476320 GGCGATGGAGGAAAGCAGC 61.476 63.158 0.00 0.00 0.00 5.25
5178 5653 1.078214 TGGCGATGGAGGAAAGCAG 60.078 57.895 0.00 0.00 0.00 4.24
5179 5654 1.377202 GTGGCGATGGAGGAAAGCA 60.377 57.895 0.00 0.00 0.00 3.91
5180 5655 2.115291 GGTGGCGATGGAGGAAAGC 61.115 63.158 0.00 0.00 0.00 3.51
5181 5656 0.322456 TTGGTGGCGATGGAGGAAAG 60.322 55.000 0.00 0.00 0.00 2.62
5182 5657 0.322456 CTTGGTGGCGATGGAGGAAA 60.322 55.000 0.00 0.00 0.00 3.13
5183 5658 1.299648 CTTGGTGGCGATGGAGGAA 59.700 57.895 0.00 0.00 0.00 3.36
5184 5659 2.669133 CCTTGGTGGCGATGGAGGA 61.669 63.158 0.00 0.00 0.00 3.71
5185 5660 2.124570 CCTTGGTGGCGATGGAGG 60.125 66.667 0.00 0.00 0.00 4.30
5201 5676 0.105039 CGGTGATCCAGAGGTTAGCC 59.895 60.000 0.00 0.00 0.00 3.93
5202 5677 0.530870 GCGGTGATCCAGAGGTTAGC 60.531 60.000 0.00 0.00 0.00 3.09
5203 5678 0.105039 GGCGGTGATCCAGAGGTTAG 59.895 60.000 0.00 0.00 0.00 2.34
5204 5679 1.672854 CGGCGGTGATCCAGAGGTTA 61.673 60.000 0.00 0.00 0.00 2.85
5205 5680 2.990479 GGCGGTGATCCAGAGGTT 59.010 61.111 0.00 0.00 0.00 3.50
5206 5681 3.461773 CGGCGGTGATCCAGAGGT 61.462 66.667 0.00 0.00 0.00 3.85
5207 5682 4.227134 CCGGCGGTGATCCAGAGG 62.227 72.222 19.97 0.00 0.00 3.69
5208 5683 1.464376 ATACCGGCGGTGATCCAGAG 61.464 60.000 39.80 6.36 36.19 3.35
5209 5684 0.178984 TATACCGGCGGTGATCCAGA 60.179 55.000 39.80 20.03 36.19 3.86
5210 5685 0.677288 TTATACCGGCGGTGATCCAG 59.323 55.000 39.80 8.00 36.19 3.86
5211 5686 1.121378 TTTATACCGGCGGTGATCCA 58.879 50.000 39.80 21.64 36.19 3.41
5212 5687 2.243602 TTTTATACCGGCGGTGATCC 57.756 50.000 39.80 0.00 36.19 3.36
5229 5704 6.367695 GCGCAATAACAAAGACCCTAATTTTT 59.632 34.615 0.30 0.00 0.00 1.94
5230 5705 5.867174 GCGCAATAACAAAGACCCTAATTTT 59.133 36.000 0.30 0.00 0.00 1.82
5231 5706 5.407502 GCGCAATAACAAAGACCCTAATTT 58.592 37.500 0.30 0.00 0.00 1.82
5232 5707 4.438200 CGCGCAATAACAAAGACCCTAATT 60.438 41.667 8.75 0.00 0.00 1.40
5233 5708 3.064820 CGCGCAATAACAAAGACCCTAAT 59.935 43.478 8.75 0.00 0.00 1.73
5234 5709 2.417239 CGCGCAATAACAAAGACCCTAA 59.583 45.455 8.75 0.00 0.00 2.69
5235 5710 2.004017 CGCGCAATAACAAAGACCCTA 58.996 47.619 8.75 0.00 0.00 3.53
5236 5711 0.802494 CGCGCAATAACAAAGACCCT 59.198 50.000 8.75 0.00 0.00 4.34
5237 5712 0.800012 TCGCGCAATAACAAAGACCC 59.200 50.000 8.75 0.00 0.00 4.46
5238 5713 1.463444 ACTCGCGCAATAACAAAGACC 59.537 47.619 8.75 0.00 0.00 3.85
5239 5714 2.875080 ACTCGCGCAATAACAAAGAC 57.125 45.000 8.75 0.00 0.00 3.01
5240 5715 4.033587 GGATTACTCGCGCAATAACAAAGA 59.966 41.667 8.75 0.00 0.00 2.52
5241 5716 4.271687 GGATTACTCGCGCAATAACAAAG 58.728 43.478 8.75 0.00 0.00 2.77
5242 5717 3.242155 CGGATTACTCGCGCAATAACAAA 60.242 43.478 8.75 0.00 0.00 2.83
5243 5718 2.283086 CGGATTACTCGCGCAATAACAA 59.717 45.455 8.75 0.00 0.00 2.83
5244 5719 1.855978 CGGATTACTCGCGCAATAACA 59.144 47.619 8.75 0.00 0.00 2.41
5245 5720 1.856597 ACGGATTACTCGCGCAATAAC 59.143 47.619 8.75 0.00 0.00 1.89
5246 5721 2.212869 ACGGATTACTCGCGCAATAA 57.787 45.000 8.75 2.52 0.00 1.40
5247 5722 3.239254 CATACGGATTACTCGCGCAATA 58.761 45.455 8.75 0.00 0.00 1.90
5248 5723 2.058798 CATACGGATTACTCGCGCAAT 58.941 47.619 8.75 0.00 0.00 3.56
5249 5724 1.483316 CATACGGATTACTCGCGCAA 58.517 50.000 8.75 0.00 0.00 4.85
5250 5725 0.937699 GCATACGGATTACTCGCGCA 60.938 55.000 8.75 0.00 0.00 6.09
5251 5726 1.615107 GGCATACGGATTACTCGCGC 61.615 60.000 0.00 0.00 0.00 6.86
5252 5727 1.334992 CGGCATACGGATTACTCGCG 61.335 60.000 0.00 0.00 39.42 5.87
5253 5728 2.431539 CGGCATACGGATTACTCGC 58.568 57.895 0.00 0.00 39.42 5.03
5263 5738 4.297071 CCGAGTACACGGCATACG 57.703 61.111 18.79 0.00 46.20 3.06
5269 5744 7.818279 AGTTACAAACGATCCGAGTACACGG 62.818 48.000 23.80 23.80 44.46 4.94
5270 5745 1.973138 ACAAACGATCCGAGTACACG 58.027 50.000 5.66 5.66 0.00 4.49
5271 5746 4.479619 AGTTACAAACGATCCGAGTACAC 58.520 43.478 0.00 0.00 36.23 2.90
5272 5747 4.771590 AGTTACAAACGATCCGAGTACA 57.228 40.909 0.00 0.00 36.23 2.90
5273 5748 6.457851 AAAAGTTACAAACGATCCGAGTAC 57.542 37.500 0.00 0.00 36.23 2.73
5275 5750 5.996669 AAAAAGTTACAAACGATCCGAGT 57.003 34.783 0.00 0.00 36.23 4.18
5296 5771 4.603231 AGTTACAAACGACGCTCAAAAA 57.397 36.364 0.00 0.00 36.23 1.94
5297 5772 5.715429 TTAGTTACAAACGACGCTCAAAA 57.285 34.783 0.00 0.00 36.23 2.44
5298 5773 5.910637 ATTAGTTACAAACGACGCTCAAA 57.089 34.783 0.00 0.00 36.23 2.69
5299 5774 5.910637 AATTAGTTACAAACGACGCTCAA 57.089 34.783 0.00 0.00 36.23 3.02
5300 5775 5.910637 AAATTAGTTACAAACGACGCTCA 57.089 34.783 0.00 0.00 36.23 4.26
5301 5776 8.870242 AATAAAATTAGTTACAAACGACGCTC 57.130 30.769 0.00 0.00 36.23 5.03
5302 5777 8.715088 AGAATAAAATTAGTTACAAACGACGCT 58.285 29.630 0.00 0.00 36.23 5.07
5303 5778 8.870242 AGAATAAAATTAGTTACAAACGACGC 57.130 30.769 0.00 0.00 36.23 5.19
5324 5799 9.857656 TGCTTCATCCATTAAATAAGAGAGAAT 57.142 29.630 0.00 0.00 0.00 2.40
5325 5800 9.685276 TTGCTTCATCCATTAAATAAGAGAGAA 57.315 29.630 0.00 0.00 0.00 2.87
5326 5801 9.685276 TTTGCTTCATCCATTAAATAAGAGAGA 57.315 29.630 0.00 0.00 0.00 3.10
5327 5802 9.947669 CTTTGCTTCATCCATTAAATAAGAGAG 57.052 33.333 0.00 0.00 0.00 3.20
5328 5803 9.466497 ACTTTGCTTCATCCATTAAATAAGAGA 57.534 29.630 0.00 0.00 0.00 3.10
5334 5809 8.291740 GCAAAAACTTTGCTTCATCCATTAAAT 58.708 29.630 15.16 0.00 41.87 1.40
5335 5810 7.255070 GGCAAAAACTTTGCTTCATCCATTAAA 60.255 33.333 20.13 0.00 44.36 1.52
5336 5811 6.204495 GGCAAAAACTTTGCTTCATCCATTAA 59.796 34.615 20.13 0.00 44.36 1.40
5337 5812 5.700373 GGCAAAAACTTTGCTTCATCCATTA 59.300 36.000 20.13 0.00 44.36 1.90
5338 5813 4.516321 GGCAAAAACTTTGCTTCATCCATT 59.484 37.500 20.13 0.00 44.36 3.16
5339 5814 4.067192 GGCAAAAACTTTGCTTCATCCAT 58.933 39.130 20.13 0.00 44.36 3.41
5340 5815 3.134442 AGGCAAAAACTTTGCTTCATCCA 59.866 39.130 20.13 0.00 44.36 3.41
5341 5816 3.732212 AGGCAAAAACTTTGCTTCATCC 58.268 40.909 20.13 6.03 44.36 3.51
5342 5817 4.979564 GAGGCAAAAACTTTGCTTCATC 57.020 40.909 23.43 13.59 46.58 2.92
5346 5821 3.893326 ACAGAGGCAAAAACTTTGCTT 57.107 38.095 20.13 14.70 44.36 3.91
5347 5822 3.893326 AACAGAGGCAAAAACTTTGCT 57.107 38.095 20.13 9.14 44.36 3.91



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.