Multiple sequence alignment - TraesCS7A01G261000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G261000 chr7A 100.000 5242 0 0 1 5242 254880172 254885413 0.000000e+00 9681.0
1 TraesCS7A01G261000 chr7A 93.115 305 21 0 373 677 21815516 21815820 1.040000e-121 448.0
2 TraesCS7A01G261000 chr7A 98.361 61 1 0 2675 2735 254882906 254882846 2.000000e-19 108.0
3 TraesCS7A01G261000 chr7B 95.703 2886 73 18 1691 4546 218564188 218561324 0.000000e+00 4595.0
4 TraesCS7A01G261000 chr7B 95.533 985 28 6 732 1705 218565184 218564205 0.000000e+00 1561.0
5 TraesCS7A01G261000 chr7B 84.416 539 36 10 4694 5217 218560972 218560467 2.190000e-133 486.0
6 TraesCS7A01G261000 chr7B 92.063 315 24 1 370 684 717328904 717329217 4.820000e-120 442.0
7 TraesCS7A01G261000 chr7B 91.327 196 13 2 1 193 218566067 218565873 1.120000e-66 265.0
8 TraesCS7A01G261000 chr7B 93.617 94 5 1 4597 4690 218561320 218561228 7.080000e-29 139.0
9 TraesCS7A01G261000 chr7B 84.034 119 12 3 2666 2777 707762043 707762161 2.000000e-19 108.0
10 TraesCS7A01G261000 chr7B 82.787 122 12 4 2662 2777 476199897 476200015 3.340000e-17 100.0
11 TraesCS7A01G261000 chr7D 95.098 2101 59 15 677 2738 242805723 242803628 0.000000e+00 3269.0
12 TraesCS7A01G261000 chr7D 96.239 1675 38 8 2898 4565 242803581 242801925 0.000000e+00 2721.0
13 TraesCS7A01G261000 chr7D 88.951 534 28 7 4692 5215 242801204 242800692 9.580000e-177 630.0
14 TraesCS7A01G261000 chr7D 95.556 90 2 2 4605 4694 242801520 242801433 5.470000e-30 143.0
15 TraesCS7A01G261000 chr7D 93.182 44 1 2 4869 4912 53731171 53731212 4.380000e-06 63.9
16 TraesCS7A01G261000 chr3A 93.770 305 19 0 373 677 623825452 623825148 4.780000e-125 459.0
17 TraesCS7A01G261000 chr1B 92.405 316 24 0 369 684 675768812 675769127 8.000000e-123 451.0
18 TraesCS7A01G261000 chr1B 88.095 84 4 3 2658 2735 332093219 332093302 1.550000e-15 95.3
19 TraesCS7A01G261000 chr1B 90.411 73 1 2 2669 2735 332093308 332093236 2.010000e-14 91.6
20 TraesCS7A01G261000 chr1B 100.000 35 0 0 4873 4907 513681701 513681735 1.220000e-06 65.8
21 TraesCS7A01G261000 chr1B 93.182 44 1 2 4869 4912 59636025 59635984 4.380000e-06 63.9
22 TraesCS7A01G261000 chr4A 92.880 309 22 0 373 681 640209187 640208879 2.880000e-122 449.0
23 TraesCS7A01G261000 chr2B 93.399 303 20 0 375 677 798371939 798371637 2.880000e-122 449.0
24 TraesCS7A01G261000 chr2A 93.421 304 19 1 374 677 78553954 78553652 2.880000e-122 449.0
25 TraesCS7A01G261000 chr2A 95.238 42 2 0 2736 2777 651599188 651599229 3.390000e-07 67.6
26 TraesCS7A01G261000 chr4B 93.115 305 21 0 373 677 40215228 40215532 1.040000e-121 448.0
27 TraesCS7A01G261000 chr6A 92.332 313 22 2 365 677 39064847 39065157 1.340000e-120 444.0
28 TraesCS7A01G261000 chr2D 89.610 77 2 1 2665 2735 506776634 506776558 5.590000e-15 93.5
29 TraesCS7A01G261000 chr2D 95.238 42 2 0 2736 2777 506776592 506776633 3.390000e-07 67.6
30 TraesCS7A01G261000 chr1A 86.905 84 5 1 2658 2735 306683036 306682953 7.230000e-14 89.8
31 TraesCS7A01G261000 chr1A 92.857 42 3 0 2736 2777 306682987 306683028 1.580000e-05 62.1
32 TraesCS7A01G261000 chr3D 95.349 43 1 1 4870 4912 53484619 53484660 3.390000e-07 67.6
33 TraesCS7A01G261000 chrUn 97.222 36 0 1 4873 4907 61741652 61741617 5.670000e-05 60.2
34 TraesCS7A01G261000 chr5D 97.143 35 1 0 4873 4907 269578714 269578680 5.670000e-05 60.2
35 TraesCS7A01G261000 chr5D 94.872 39 0 2 4869 4907 424967796 424967832 5.670000e-05 60.2
36 TraesCS7A01G261000 chr4D 94.872 39 1 1 4870 4907 499898860 499898898 5.670000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G261000 chr7A 254880172 254885413 5241 False 9681.00 9681 100.0000 1 5242 1 chr7A.!!$F2 5241
1 TraesCS7A01G261000 chr7B 218560467 218566067 5600 True 1409.20 4595 92.1192 1 5217 5 chr7B.!!$R1 5216
2 TraesCS7A01G261000 chr7D 242800692 242805723 5031 True 1690.75 3269 93.9610 677 5215 4 chr7D.!!$R1 4538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 975 0.030638 GAACACACACATGCACACCC 59.969 55.000 0.0 0.0 0.0 4.61 F
458 980 0.036732 CACACATGCACACCCTACCT 59.963 55.000 0.0 0.0 0.0 3.08 F
1393 1936 0.035820 GACCCATCGCCAGTTTACCA 60.036 55.000 0.0 0.0 0.0 3.25 F
2518 3096 1.140052 CCAGTGGTGGTGTTCTGTGTA 59.860 52.381 0.0 0.0 39.3 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1312 1855 2.914861 TCGAATGCAAACGTTCACATG 58.085 42.857 14.57 5.22 41.15 3.21 R
1678 2221 3.369147 CACAAGGAGTTAGCTGTTCATCG 59.631 47.826 0.00 0.00 0.00 3.84 R
2841 3434 2.547211 CCAGGACGGTACTATGTACGAG 59.453 54.545 0.00 0.00 0.00 4.18 R
4398 4993 0.320683 CTGAACGGTCTGATGCACCA 60.321 55.000 0.33 0.00 32.89 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 6.715280 AGAGATGACATTCTTGTAACCACAT 58.285 36.000 0.00 0.00 35.79 3.21
53 54 9.528018 TTCTTGTAACCACATTTCATTTCTTTC 57.472 29.630 0.00 0.00 33.76 2.62
141 145 8.782339 TTTGTAGCAACTATTAGTAAGGTTCC 57.218 34.615 0.00 0.00 0.00 3.62
148 152 5.173664 ACTATTAGTAAGGTTCCGCAACAC 58.826 41.667 0.00 0.00 33.70 3.32
150 154 0.470766 AGTAAGGTTCCGCAACACCA 59.529 50.000 0.00 0.00 35.25 4.17
152 156 0.881159 TAAGGTTCCGCAACACCACG 60.881 55.000 0.00 0.00 35.25 4.94
160 164 2.668212 CAACACCACGCGGGACAT 60.668 61.111 11.66 0.00 41.15 3.06
172 176 3.321111 ACGCGGGACATCATCTAGTTTAT 59.679 43.478 12.47 0.00 0.00 1.40
268 786 7.513190 TCATTTTACAAATTAAATTCGCGGG 57.487 32.000 6.13 0.00 0.00 6.13
297 819 1.710816 TGGGCCGATTTGACCTTTTT 58.289 45.000 0.00 0.00 0.00 1.94
321 843 1.140804 GCCTCGAGCAACTCTCTCC 59.859 63.158 6.99 0.00 42.97 3.71
322 844 1.431440 CCTCGAGCAACTCTCTCCG 59.569 63.158 6.99 0.00 39.70 4.63
323 845 1.309499 CCTCGAGCAACTCTCTCCGT 61.309 60.000 6.99 0.00 39.70 4.69
325 847 1.153939 CGAGCAACTCTCTCCGTGG 60.154 63.158 0.00 0.00 39.70 4.94
326 848 1.867919 CGAGCAACTCTCTCCGTGGT 61.868 60.000 0.00 0.00 39.70 4.16
327 849 0.109039 GAGCAACTCTCTCCGTGGTC 60.109 60.000 0.00 0.00 38.78 4.02
338 860 2.572284 CGTGGTCGGGTTCCTCTC 59.428 66.667 0.00 0.00 0.00 3.20
339 861 1.977544 CGTGGTCGGGTTCCTCTCT 60.978 63.158 0.00 0.00 0.00 3.10
340 862 1.592223 GTGGTCGGGTTCCTCTCTG 59.408 63.158 0.00 0.00 0.00 3.35
341 863 1.155390 TGGTCGGGTTCCTCTCTGT 59.845 57.895 0.00 0.00 0.00 3.41
342 864 1.185618 TGGTCGGGTTCCTCTCTGTG 61.186 60.000 0.00 0.00 0.00 3.66
343 865 1.592223 GTCGGGTTCCTCTCTGTGG 59.408 63.158 0.00 0.00 0.00 4.17
344 866 1.609501 TCGGGTTCCTCTCTGTGGG 60.610 63.158 0.00 0.00 0.00 4.61
345 867 2.671682 GGGTTCCTCTCTGTGGGC 59.328 66.667 0.00 0.00 0.00 5.36
346 868 2.671682 GGTTCCTCTCTGTGGGCC 59.328 66.667 0.00 0.00 0.00 5.80
347 869 2.266055 GTTCCTCTCTGTGGGCCG 59.734 66.667 0.00 0.00 0.00 6.13
348 870 2.203788 TTCCTCTCTGTGGGCCGT 60.204 61.111 0.00 0.00 0.00 5.68
349 871 2.583441 TTCCTCTCTGTGGGCCGTG 61.583 63.158 0.00 0.00 0.00 4.94
350 872 4.767255 CCTCTCTGTGGGCCGTGC 62.767 72.222 0.00 0.00 0.00 5.34
356 878 4.634703 TGTGGGCCGTGCGTGATT 62.635 61.111 0.00 0.00 0.00 2.57
357 879 3.361977 GTGGGCCGTGCGTGATTT 61.362 61.111 0.00 0.00 0.00 2.17
358 880 2.036006 GTGGGCCGTGCGTGATTTA 61.036 57.895 0.00 0.00 0.00 1.40
359 881 1.302591 TGGGCCGTGCGTGATTTAA 60.303 52.632 0.00 0.00 0.00 1.52
360 882 1.135939 GGGCCGTGCGTGATTTAAC 59.864 57.895 0.00 0.00 0.00 2.01
361 883 1.303091 GGGCCGTGCGTGATTTAACT 61.303 55.000 0.00 0.00 0.00 2.24
362 884 0.519961 GGCCGTGCGTGATTTAACTT 59.480 50.000 0.00 0.00 0.00 2.66
363 885 1.465187 GGCCGTGCGTGATTTAACTTC 60.465 52.381 0.00 0.00 0.00 3.01
364 886 1.195900 GCCGTGCGTGATTTAACTTCA 59.804 47.619 0.00 0.00 0.00 3.02
365 887 2.724839 GCCGTGCGTGATTTAACTTCAG 60.725 50.000 0.00 0.00 0.00 3.02
366 888 2.734606 CCGTGCGTGATTTAACTTCAGA 59.265 45.455 0.00 0.00 0.00 3.27
367 889 3.181530 CCGTGCGTGATTTAACTTCAGAG 60.182 47.826 0.00 0.00 0.00 3.35
368 890 3.673338 CGTGCGTGATTTAACTTCAGAGA 59.327 43.478 0.00 0.00 0.00 3.10
369 891 4.327357 CGTGCGTGATTTAACTTCAGAGAT 59.673 41.667 0.00 0.00 0.00 2.75
370 892 5.499334 CGTGCGTGATTTAACTTCAGAGATC 60.499 44.000 0.00 0.00 0.00 2.75
371 893 5.348724 GTGCGTGATTTAACTTCAGAGATCA 59.651 40.000 0.00 0.00 0.00 2.92
372 894 6.036517 GTGCGTGATTTAACTTCAGAGATCAT 59.963 38.462 0.00 0.00 0.00 2.45
373 895 6.595326 TGCGTGATTTAACTTCAGAGATCATT 59.405 34.615 0.00 0.00 0.00 2.57
374 896 7.119699 TGCGTGATTTAACTTCAGAGATCATTT 59.880 33.333 0.00 0.00 0.00 2.32
375 897 7.965107 GCGTGATTTAACTTCAGAGATCATTTT 59.035 33.333 0.00 0.00 0.00 1.82
376 898 9.831737 CGTGATTTAACTTCAGAGATCATTTTT 57.168 29.630 0.00 0.00 0.00 1.94
399 921 7.561021 TTTTTAAGCATCAGTACAGACACAA 57.439 32.000 0.00 0.00 0.00 3.33
400 922 6.785488 TTTAAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
401 923 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
402 924 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
403 925 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
404 926 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
405 927 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
406 928 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
407 929 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
408 930 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
409 931 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
410 932 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
411 933 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
412 934 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
413 935 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
414 936 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
418 940 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
419 941 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
420 942 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
421 943 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
422 944 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
423 945 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
424 946 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
425 947 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
426 948 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
427 949 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
428 950 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
429 951 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
430 952 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
431 953 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
432 954 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
433 955 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
434 956 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
435 957 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
436 958 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
437 959 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
438 960 3.118408 GCATACACTCACCCCTATGAACA 60.118 47.826 0.00 0.00 0.00 3.18
439 961 4.442706 CATACACTCACCCCTATGAACAC 58.557 47.826 0.00 0.00 0.00 3.32
440 962 2.334977 ACACTCACCCCTATGAACACA 58.665 47.619 0.00 0.00 0.00 3.72
441 963 2.038557 ACACTCACCCCTATGAACACAC 59.961 50.000 0.00 0.00 0.00 3.82
442 964 2.038426 CACTCACCCCTATGAACACACA 59.962 50.000 0.00 0.00 0.00 3.72
443 965 2.038557 ACTCACCCCTATGAACACACAC 59.961 50.000 0.00 0.00 0.00 3.82
444 966 2.038426 CTCACCCCTATGAACACACACA 59.962 50.000 0.00 0.00 0.00 3.72
445 967 2.642311 TCACCCCTATGAACACACACAT 59.358 45.455 0.00 0.00 0.00 3.21
446 968 2.749076 CACCCCTATGAACACACACATG 59.251 50.000 0.00 0.00 0.00 3.21
447 969 1.745087 CCCCTATGAACACACACATGC 59.255 52.381 0.00 0.00 0.00 4.06
448 970 2.435422 CCCTATGAACACACACATGCA 58.565 47.619 0.00 0.00 0.00 3.96
449 971 2.162208 CCCTATGAACACACACATGCAC 59.838 50.000 0.00 0.00 0.00 4.57
450 972 2.813172 CCTATGAACACACACATGCACA 59.187 45.455 0.00 0.00 0.00 4.57
451 973 2.780065 ATGAACACACACATGCACAC 57.220 45.000 0.00 0.00 0.00 3.82
452 974 0.737804 TGAACACACACATGCACACC 59.262 50.000 0.00 0.00 0.00 4.16
453 975 0.030638 GAACACACACATGCACACCC 59.969 55.000 0.00 0.00 0.00 4.61
454 976 0.395586 AACACACACATGCACACCCT 60.396 50.000 0.00 0.00 0.00 4.34
455 977 0.472044 ACACACACATGCACACCCTA 59.528 50.000 0.00 0.00 0.00 3.53
456 978 0.874390 CACACACATGCACACCCTAC 59.126 55.000 0.00 0.00 0.00 3.18
457 979 0.250727 ACACACATGCACACCCTACC 60.251 55.000 0.00 0.00 0.00 3.18
458 980 0.036732 CACACATGCACACCCTACCT 59.963 55.000 0.00 0.00 0.00 3.08
459 981 0.324943 ACACATGCACACCCTACCTC 59.675 55.000 0.00 0.00 0.00 3.85
460 982 0.615331 CACATGCACACCCTACCTCT 59.385 55.000 0.00 0.00 0.00 3.69
461 983 1.831106 CACATGCACACCCTACCTCTA 59.169 52.381 0.00 0.00 0.00 2.43
462 984 2.435805 CACATGCACACCCTACCTCTAT 59.564 50.000 0.00 0.00 0.00 1.98
463 985 2.435805 ACATGCACACCCTACCTCTATG 59.564 50.000 0.00 0.00 0.00 2.23
464 986 2.543037 TGCACACCCTACCTCTATGA 57.457 50.000 0.00 0.00 0.00 2.15
465 987 2.388735 TGCACACCCTACCTCTATGAG 58.611 52.381 0.00 0.00 0.00 2.90
466 988 1.069358 GCACACCCTACCTCTATGAGC 59.931 57.143 0.00 0.00 0.00 4.26
467 989 2.388735 CACACCCTACCTCTATGAGCA 58.611 52.381 0.00 0.00 0.00 4.26
468 990 2.101582 CACACCCTACCTCTATGAGCAC 59.898 54.545 0.00 0.00 0.00 4.40
469 991 1.689273 CACCCTACCTCTATGAGCACC 59.311 57.143 0.00 0.00 0.00 5.01
470 992 1.576272 ACCCTACCTCTATGAGCACCT 59.424 52.381 0.00 0.00 0.00 4.00
471 993 2.022918 ACCCTACCTCTATGAGCACCTT 60.023 50.000 0.00 0.00 0.00 3.50
472 994 2.630580 CCCTACCTCTATGAGCACCTTC 59.369 54.545 0.00 0.00 0.00 3.46
473 995 2.294791 CCTACCTCTATGAGCACCTTCG 59.705 54.545 0.00 0.00 0.00 3.79
474 996 2.145397 ACCTCTATGAGCACCTTCGA 57.855 50.000 0.00 0.00 0.00 3.71
475 997 2.457598 ACCTCTATGAGCACCTTCGAA 58.542 47.619 0.00 0.00 0.00 3.71
476 998 2.832129 ACCTCTATGAGCACCTTCGAAA 59.168 45.455 0.00 0.00 0.00 3.46
477 999 3.118956 ACCTCTATGAGCACCTTCGAAAG 60.119 47.826 0.00 0.00 0.00 2.62
478 1000 3.131223 CCTCTATGAGCACCTTCGAAAGA 59.869 47.826 0.00 0.00 39.20 2.52
479 1001 4.109050 CTCTATGAGCACCTTCGAAAGAC 58.891 47.826 0.00 0.00 41.84 3.01
480 1002 3.764434 TCTATGAGCACCTTCGAAAGACT 59.236 43.478 0.00 0.00 41.84 3.24
481 1003 2.154854 TGAGCACCTTCGAAAGACTG 57.845 50.000 0.00 0.00 41.84 3.51
482 1004 1.686587 TGAGCACCTTCGAAAGACTGA 59.313 47.619 0.00 0.00 41.84 3.41
483 1005 2.288457 TGAGCACCTTCGAAAGACTGAG 60.288 50.000 0.00 0.00 41.84 3.35
484 1006 0.793250 GCACCTTCGAAAGACTGAGC 59.207 55.000 0.00 0.00 41.84 4.26
485 1007 1.433534 CACCTTCGAAAGACTGAGCC 58.566 55.000 0.00 0.00 41.84 4.70
486 1008 0.038159 ACCTTCGAAAGACTGAGCCG 60.038 55.000 0.00 0.00 41.84 5.52
487 1009 0.737715 CCTTCGAAAGACTGAGCCGG 60.738 60.000 0.00 0.00 41.84 6.13
488 1010 1.355066 CTTCGAAAGACTGAGCCGGC 61.355 60.000 21.89 21.89 41.84 6.13
489 1011 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
490 1012 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
491 1013 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
492 1014 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
493 1015 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
494 1016 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
495 1017 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
496 1018 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
497 1019 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
498 1020 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
499 1021 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
500 1022 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
501 1023 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
502 1024 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
503 1025 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
504 1026 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
505 1027 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
506 1028 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
507 1029 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
508 1030 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
509 1031 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
510 1032 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
511 1033 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
512 1034 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
513 1035 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
514 1036 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
515 1037 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
516 1038 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
517 1039 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
518 1040 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
519 1041 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
520 1042 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
533 1055 4.471726 CGTAGGCGCCTCGTCGTT 62.472 66.667 36.73 10.36 36.23 3.85
534 1056 2.879462 GTAGGCGCCTCGTCGTTG 60.879 66.667 36.73 0.00 36.23 4.10
535 1057 3.057548 TAGGCGCCTCGTCGTTGA 61.058 61.111 36.73 10.36 36.23 3.18
536 1058 3.332493 TAGGCGCCTCGTCGTTGAC 62.332 63.158 36.73 0.00 36.23 3.18
555 1077 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
556 1078 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
557 1079 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
558 1080 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
559 1081 1.420430 AACGTCTCCTCCCACTGAAA 58.580 50.000 0.00 0.00 0.00 2.69
560 1082 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
561 1083 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
562 1084 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
563 1085 0.832135 TCTCCTCCCACTGAAAGCGT 60.832 55.000 0.00 0.00 37.60 5.07
564 1086 0.895530 CTCCTCCCACTGAAAGCGTA 59.104 55.000 0.00 0.00 37.60 4.42
565 1087 1.482593 CTCCTCCCACTGAAAGCGTAT 59.517 52.381 0.00 0.00 37.60 3.06
566 1088 1.480954 TCCTCCCACTGAAAGCGTATC 59.519 52.381 0.00 0.00 37.60 2.24
567 1089 1.560923 CTCCCACTGAAAGCGTATCG 58.439 55.000 0.00 0.00 37.60 2.92
580 1102 1.847818 CGTATCGCCGAAAATCCTGA 58.152 50.000 0.00 0.00 0.00 3.86
581 1103 2.198406 CGTATCGCCGAAAATCCTGAA 58.802 47.619 0.00 0.00 0.00 3.02
582 1104 2.605818 CGTATCGCCGAAAATCCTGAAA 59.394 45.455 0.00 0.00 0.00 2.69
583 1105 3.247648 CGTATCGCCGAAAATCCTGAAAT 59.752 43.478 0.00 0.00 0.00 2.17
584 1106 4.446385 CGTATCGCCGAAAATCCTGAAATA 59.554 41.667 0.00 0.00 0.00 1.40
585 1107 5.050634 CGTATCGCCGAAAATCCTGAAATAA 60.051 40.000 0.00 0.00 0.00 1.40
586 1108 5.828299 ATCGCCGAAAATCCTGAAATAAA 57.172 34.783 0.00 0.00 0.00 1.40
587 1109 5.828299 TCGCCGAAAATCCTGAAATAAAT 57.172 34.783 0.00 0.00 0.00 1.40
588 1110 5.816919 TCGCCGAAAATCCTGAAATAAATC 58.183 37.500 0.00 0.00 0.00 2.17
589 1111 4.976116 CGCCGAAAATCCTGAAATAAATCC 59.024 41.667 0.00 0.00 0.00 3.01
590 1112 5.449862 CGCCGAAAATCCTGAAATAAATCCA 60.450 40.000 0.00 0.00 0.00 3.41
591 1113 6.337356 GCCGAAAATCCTGAAATAAATCCAA 58.663 36.000 0.00 0.00 0.00 3.53
592 1114 6.476706 GCCGAAAATCCTGAAATAAATCCAAG 59.523 38.462 0.00 0.00 0.00 3.61
593 1115 7.630513 GCCGAAAATCCTGAAATAAATCCAAGA 60.631 37.037 0.00 0.00 0.00 3.02
594 1116 8.250332 CCGAAAATCCTGAAATAAATCCAAGAA 58.750 33.333 0.00 0.00 0.00 2.52
595 1117 9.807649 CGAAAATCCTGAAATAAATCCAAGAAT 57.192 29.630 0.00 0.00 0.00 2.40
601 1123 9.425248 TCCTGAAATAAATCCAAGAATAATGCT 57.575 29.630 0.00 0.00 0.00 3.79
608 1130 9.812347 ATAAATCCAAGAATAATGCTATCACCA 57.188 29.630 0.00 0.00 0.00 4.17
609 1131 7.756395 AATCCAAGAATAATGCTATCACCAG 57.244 36.000 0.00 0.00 0.00 4.00
610 1132 5.624159 TCCAAGAATAATGCTATCACCAGG 58.376 41.667 0.00 0.00 0.00 4.45
611 1133 5.369404 TCCAAGAATAATGCTATCACCAGGA 59.631 40.000 0.00 0.00 0.00 3.86
612 1134 6.044754 TCCAAGAATAATGCTATCACCAGGAT 59.955 38.462 0.00 0.00 40.14 3.24
613 1135 6.718454 CCAAGAATAATGCTATCACCAGGATT 59.282 38.462 0.00 0.00 39.56 3.01
614 1136 7.232127 CCAAGAATAATGCTATCACCAGGATTT 59.768 37.037 0.00 0.00 37.67 2.17
615 1137 7.756395 AGAATAATGCTATCACCAGGATTTG 57.244 36.000 0.00 0.00 37.67 2.32
616 1138 7.520798 AGAATAATGCTATCACCAGGATTTGA 58.479 34.615 0.00 0.00 37.67 2.69
617 1139 8.000709 AGAATAATGCTATCACCAGGATTTGAA 58.999 33.333 0.00 0.00 37.67 2.69
618 1140 8.716674 AATAATGCTATCACCAGGATTTGAAT 57.283 30.769 0.00 0.00 37.67 2.57
619 1141 6.401047 AATGCTATCACCAGGATTTGAATG 57.599 37.500 0.00 0.00 33.28 2.67
620 1142 3.633525 TGCTATCACCAGGATTTGAATGC 59.366 43.478 0.00 0.00 37.44 3.56
621 1143 3.887716 GCTATCACCAGGATTTGAATGCT 59.112 43.478 0.00 0.00 37.59 3.79
628 1150 3.393426 AGGATTTGAATGCTGATGGGT 57.607 42.857 0.00 0.00 35.63 4.51
629 1151 3.716431 AGGATTTGAATGCTGATGGGTT 58.284 40.909 0.00 0.00 35.63 4.11
630 1152 4.870636 AGGATTTGAATGCTGATGGGTTA 58.129 39.130 0.00 0.00 35.63 2.85
631 1153 5.271598 AGGATTTGAATGCTGATGGGTTAA 58.728 37.500 0.00 0.00 35.63 2.01
632 1154 5.721000 AGGATTTGAATGCTGATGGGTTAAA 59.279 36.000 0.00 0.00 35.63 1.52
633 1155 6.044682 GGATTTGAATGCTGATGGGTTAAAG 58.955 40.000 0.00 0.00 0.00 1.85
634 1156 6.127366 GGATTTGAATGCTGATGGGTTAAAGA 60.127 38.462 0.00 0.00 0.00 2.52
635 1157 6.855763 TTTGAATGCTGATGGGTTAAAGAT 57.144 33.333 0.00 0.00 0.00 2.40
636 1158 7.953005 TTTGAATGCTGATGGGTTAAAGATA 57.047 32.000 0.00 0.00 0.00 1.98
637 1159 6.942532 TGAATGCTGATGGGTTAAAGATAC 57.057 37.500 0.00 0.00 0.00 2.24
638 1160 5.827797 TGAATGCTGATGGGTTAAAGATACC 59.172 40.000 0.00 0.00 34.82 2.73
639 1161 4.853468 TGCTGATGGGTTAAAGATACCA 57.147 40.909 0.00 0.00 37.40 3.25
640 1162 4.523083 TGCTGATGGGTTAAAGATACCAC 58.477 43.478 0.00 0.00 37.40 4.16
641 1163 4.227300 TGCTGATGGGTTAAAGATACCACT 59.773 41.667 0.00 0.00 37.40 4.00
642 1164 5.427157 TGCTGATGGGTTAAAGATACCACTA 59.573 40.000 0.00 0.00 37.40 2.74
643 1165 6.101150 TGCTGATGGGTTAAAGATACCACTAT 59.899 38.462 0.00 0.00 37.40 2.12
644 1166 6.998673 GCTGATGGGTTAAAGATACCACTATT 59.001 38.462 0.00 0.00 37.40 1.73
645 1167 7.173390 GCTGATGGGTTAAAGATACCACTATTC 59.827 40.741 0.00 0.00 37.40 1.75
646 1168 8.096621 TGATGGGTTAAAGATACCACTATTCA 57.903 34.615 0.00 0.00 37.40 2.57
647 1169 7.990886 TGATGGGTTAAAGATACCACTATTCAC 59.009 37.037 0.00 0.00 37.40 3.18
648 1170 6.655930 TGGGTTAAAGATACCACTATTCACC 58.344 40.000 0.00 0.00 37.40 4.02
649 1171 6.445786 TGGGTTAAAGATACCACTATTCACCT 59.554 38.462 0.00 0.00 37.40 4.00
650 1172 7.624478 TGGGTTAAAGATACCACTATTCACCTA 59.376 37.037 0.00 0.00 37.40 3.08
651 1173 8.488668 GGGTTAAAGATACCACTATTCACCTAA 58.511 37.037 0.00 0.00 37.40 2.69
652 1174 9.322773 GGTTAAAGATACCACTATTCACCTAAC 57.677 37.037 0.00 0.00 35.67 2.34
653 1175 9.322773 GTTAAAGATACCACTATTCACCTAACC 57.677 37.037 0.00 0.00 0.00 2.85
654 1176 7.504926 AAAGATACCACTATTCACCTAACCA 57.495 36.000 0.00 0.00 0.00 3.67
655 1177 7.504926 AAGATACCACTATTCACCTAACCAA 57.495 36.000 0.00 0.00 0.00 3.67
656 1178 6.885922 AGATACCACTATTCACCTAACCAAC 58.114 40.000 0.00 0.00 0.00 3.77
657 1179 6.672657 AGATACCACTATTCACCTAACCAACT 59.327 38.462 0.00 0.00 0.00 3.16
658 1180 5.161943 ACCACTATTCACCTAACCAACTC 57.838 43.478 0.00 0.00 0.00 3.01
659 1181 4.595781 ACCACTATTCACCTAACCAACTCA 59.404 41.667 0.00 0.00 0.00 3.41
660 1182 5.072600 ACCACTATTCACCTAACCAACTCAA 59.927 40.000 0.00 0.00 0.00 3.02
661 1183 5.411669 CCACTATTCACCTAACCAACTCAAC 59.588 44.000 0.00 0.00 0.00 3.18
662 1184 5.411669 CACTATTCACCTAACCAACTCAACC 59.588 44.000 0.00 0.00 0.00 3.77
663 1185 3.935818 TTCACCTAACCAACTCAACCA 57.064 42.857 0.00 0.00 0.00 3.67
664 1186 3.202829 TCACCTAACCAACTCAACCAC 57.797 47.619 0.00 0.00 0.00 4.16
665 1187 2.506231 TCACCTAACCAACTCAACCACA 59.494 45.455 0.00 0.00 0.00 4.17
666 1188 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
667 1189 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
668 1190 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
681 1203 1.148310 CACAGGTTGATTCGCGACTT 58.852 50.000 9.15 0.00 0.00 3.01
1099 1642 2.728318 GGAAACAACGTACGTTCTCTCC 59.272 50.000 29.67 26.66 36.00 3.71
1234 1777 6.603599 AGTTTTTCTTTCAAGAGTGGCTAACT 59.396 34.615 0.00 0.00 43.85 2.24
1235 1778 7.122799 AGTTTTTCTTTCAAGAGTGGCTAACTT 59.877 33.333 0.00 0.00 40.07 2.66
1241 1784 6.628919 TTCAAGAGTGGCTAACTTTTAACC 57.371 37.500 0.00 0.00 40.07 2.85
1266 1809 7.355778 CAGACTAGAAATTTGTTGTGGAGTTC 58.644 38.462 7.13 0.00 0.00 3.01
1312 1855 1.082104 CGGTTTTCGCTCTTGTGCC 60.082 57.895 0.00 0.00 0.00 5.01
1338 1881 5.144359 GTGAACGTTTGCATTCGAATAAGT 58.856 37.500 10.97 0.76 0.00 2.24
1393 1936 0.035820 GACCCATCGCCAGTTTACCA 60.036 55.000 0.00 0.00 0.00 3.25
1678 2221 7.672983 TTTGATGATTGGTCTTTGTCTCTAC 57.327 36.000 0.00 0.00 0.00 2.59
1756 2330 6.030228 GCTGCAACTGATTTCAATTAGTACC 58.970 40.000 0.00 0.00 34.57 3.34
1867 2441 9.773328 CAACGTTGATATGTTCAAGTTGATAAT 57.227 29.630 23.90 6.25 44.89 1.28
2223 2800 1.350684 TGCCATCAGCCACTGTTTAGA 59.649 47.619 0.00 0.00 42.71 2.10
2224 2801 1.740025 GCCATCAGCCACTGTTTAGAC 59.260 52.381 0.00 0.00 34.35 2.59
2227 2804 3.525537 CATCAGCCACTGTTTAGACGAT 58.474 45.455 0.00 0.00 32.61 3.73
2247 2824 9.667107 AGACGATCTTCAACTTAAATCCAATAA 57.333 29.630 1.65 0.00 0.00 1.40
2339 2917 5.316770 GCTGTACGACTGCTTTGAATTTAG 58.683 41.667 0.00 0.00 39.55 1.85
2385 2963 4.281941 TGCTTATTACAACCACATTTGCCA 59.718 37.500 0.00 0.00 0.00 4.92
2403 2981 6.939132 TTGCCAAATTTTGTTGATGACATT 57.061 29.167 8.26 0.00 38.26 2.71
2518 3096 1.140052 CCAGTGGTGGTGTTCTGTGTA 59.860 52.381 0.00 0.00 39.30 2.90
2703 3290 4.911514 AATGTAAGACGTTTTGGCAGTT 57.088 36.364 0.83 0.00 0.00 3.16
2743 3336 9.730420 GTCTTACATTTGTGAACATTAAACTGT 57.270 29.630 0.00 0.00 0.00 3.55
2814 3407 4.871933 AATGAAATGGTCCAAGTGAACC 57.128 40.909 0.00 0.00 0.00 3.62
2857 3450 4.118410 CTCTGTCTCGTACATAGTACCGT 58.882 47.826 2.06 0.00 37.50 4.83
2887 3481 7.218963 GGTTCTTTCGATGATAGTTTTTGCATC 59.781 37.037 0.00 0.00 35.10 3.91
3157 3752 4.033990 TCGATGCTCACACTGTTCTATC 57.966 45.455 0.00 0.00 0.00 2.08
3468 4063 3.055385 TCTGCCTCTACGTATTTGCCTTT 60.055 43.478 0.00 0.00 0.00 3.11
3560 4155 3.508762 CAGCCTCAATTGTTCTGATTGC 58.491 45.455 5.13 0.00 35.10 3.56
3891 4486 3.931468 AGAACAAGCACGATCTTCATCTG 59.069 43.478 0.00 0.00 0.00 2.90
4074 4669 1.001406 CCCCAGATGTTAGCCGAGATC 59.999 57.143 0.00 0.00 0.00 2.75
4106 4701 2.348998 CTTGTGGAAGGCCGAGCT 59.651 61.111 0.00 0.00 36.79 4.09
4284 4879 3.690139 CAGATGAACATTTGAGCTCTGCT 59.310 43.478 16.19 0.00 43.88 4.24
4304 4899 3.993234 GCAGTGCGCCATCGATCG 61.993 66.667 9.36 9.36 38.10 3.69
4393 4988 1.594331 ACAGACTTCCCGTTGCTTTC 58.406 50.000 0.00 0.00 0.00 2.62
4398 4993 3.122727 TTCCCGTTGCTTTCCCGGT 62.123 57.895 0.00 0.00 40.10 5.28
4417 5012 0.320683 TGGTGCATCAGACCGTTCAG 60.321 55.000 0.00 0.00 36.12 3.02
4433 5028 1.024271 TCAGGCTTCTGTTGTTGTGC 58.976 50.000 0.00 0.00 39.45 4.57
4456 5066 5.248087 CGTGTTTGTTGTGATAATAGCTCG 58.752 41.667 0.00 0.00 0.00 5.03
4565 5185 2.861274 TGTTCATGATGTGGCTTGTCA 58.139 42.857 0.00 0.00 0.00 3.58
4566 5186 2.815503 TGTTCATGATGTGGCTTGTCAG 59.184 45.455 0.00 0.00 0.00 3.51
4567 5187 3.076621 GTTCATGATGTGGCTTGTCAGA 58.923 45.455 0.00 0.00 0.00 3.27
4568 5188 2.981898 TCATGATGTGGCTTGTCAGAG 58.018 47.619 0.00 0.00 0.00 3.35
4569 5189 2.303890 TCATGATGTGGCTTGTCAGAGT 59.696 45.455 0.00 0.00 0.00 3.24
4570 5190 2.174363 TGATGTGGCTTGTCAGAGTG 57.826 50.000 0.00 0.00 0.00 3.51
4571 5191 0.801251 GATGTGGCTTGTCAGAGTGC 59.199 55.000 0.00 0.00 0.00 4.40
4572 5192 0.607489 ATGTGGCTTGTCAGAGTGCC 60.607 55.000 0.00 0.00 45.10 5.01
4574 5194 4.730487 GGCTTGTCAGAGTGCCAT 57.270 55.556 0.00 0.00 44.34 4.40
4575 5195 2.475666 GGCTTGTCAGAGTGCCATC 58.524 57.895 0.00 0.00 44.34 3.51
4576 5196 1.364626 GGCTTGTCAGAGTGCCATCG 61.365 60.000 0.00 0.00 44.34 3.84
4577 5197 1.975363 GCTTGTCAGAGTGCCATCGC 61.975 60.000 0.00 0.00 0.00 4.58
4578 5198 1.364626 CTTGTCAGAGTGCCATCGCC 61.365 60.000 0.00 0.00 0.00 5.54
4579 5199 2.512515 GTCAGAGTGCCATCGCCC 60.513 66.667 0.00 0.00 0.00 6.13
4580 5200 3.785859 TCAGAGTGCCATCGCCCC 61.786 66.667 0.00 0.00 0.00 5.80
4581 5201 4.864334 CAGAGTGCCATCGCCCCC 62.864 72.222 0.00 0.00 0.00 5.40
4626 5611 8.283291 GGTGAGGCGTATTTAATCAAGATTAAG 58.717 37.037 13.22 5.62 42.26 1.85
4686 5916 5.804639 AGTGAATGTAGGTGTGCAGATTTA 58.195 37.500 0.00 0.00 0.00 1.40
4688 5918 5.065218 GTGAATGTAGGTGTGCAGATTTAGG 59.935 44.000 0.00 0.00 0.00 2.69
4690 5920 4.202245 TGTAGGTGTGCAGATTTAGGAC 57.798 45.455 0.00 0.00 0.00 3.85
4696 5926 5.128171 AGGTGTGCAGATTTAGGACGTATTA 59.872 40.000 0.00 0.00 0.00 0.98
4715 5953 8.445193 CGTATTATTCCTACGTCCTAATGAAC 57.555 38.462 0.00 0.00 37.71 3.18
4716 5954 8.077991 CGTATTATTCCTACGTCCTAATGAACA 58.922 37.037 0.00 0.00 37.71 3.18
4788 6026 0.737219 GCTATTGCCAAGTCTGCTGG 59.263 55.000 0.00 0.00 0.00 4.85
4849 6087 3.723348 GACGTGCGGGCAAGAACC 61.723 66.667 13.36 0.00 0.00 3.62
4926 6186 3.058351 CGTTGCCGTTCTACGTCG 58.942 61.111 0.00 0.00 40.58 5.12
4977 6249 1.099879 GCCCAATAGCCTCAGCACAG 61.100 60.000 0.00 0.00 43.56 3.66
4978 6250 1.099879 CCCAATAGCCTCAGCACAGC 61.100 60.000 0.00 0.00 43.56 4.40
4979 6251 0.393402 CCAATAGCCTCAGCACAGCA 60.393 55.000 0.00 0.00 43.56 4.41
4980 6252 1.456296 CAATAGCCTCAGCACAGCAA 58.544 50.000 0.00 0.00 43.56 3.91
4981 6253 2.022195 CAATAGCCTCAGCACAGCAAT 58.978 47.619 0.00 0.00 43.56 3.56
4982 6254 1.964552 ATAGCCTCAGCACAGCAATC 58.035 50.000 0.00 0.00 43.56 2.67
4983 6255 0.614812 TAGCCTCAGCACAGCAATCA 59.385 50.000 0.00 0.00 43.56 2.57
4984 6256 0.677098 AGCCTCAGCACAGCAATCAG 60.677 55.000 0.00 0.00 43.56 2.90
4985 6257 1.801332 CCTCAGCACAGCAATCAGC 59.199 57.895 0.00 0.00 46.19 4.26
5003 6275 1.159713 GCGCACATACTATGCAGGCA 61.160 55.000 0.30 0.00 43.57 4.75
5044 6316 0.664761 CAGGAAGGCCAATATGTGCG 59.335 55.000 5.01 0.00 36.29 5.34
5074 6346 2.433318 GTGGCGCTCTCTCACACC 60.433 66.667 7.64 0.00 0.00 4.16
5075 6347 2.917227 TGGCGCTCTCTCACACCA 60.917 61.111 7.64 0.00 0.00 4.17
5076 6348 2.285773 TGGCGCTCTCTCACACCAT 61.286 57.895 7.64 0.00 0.00 3.55
5077 6349 1.520342 GGCGCTCTCTCACACCATC 60.520 63.158 7.64 0.00 0.00 3.51
5078 6350 1.520342 GCGCTCTCTCACACCATCC 60.520 63.158 0.00 0.00 0.00 3.51
5079 6351 1.226802 CGCTCTCTCACACCATCCG 60.227 63.158 0.00 0.00 0.00 4.18
5080 6352 1.893786 GCTCTCTCACACCATCCGT 59.106 57.895 0.00 0.00 0.00 4.69
5081 6353 0.179124 GCTCTCTCACACCATCCGTC 60.179 60.000 0.00 0.00 0.00 4.79
5082 6354 0.457851 CTCTCTCACACCATCCGTCC 59.542 60.000 0.00 0.00 0.00 4.79
5083 6355 0.251608 TCTCTCACACCATCCGTCCA 60.252 55.000 0.00 0.00 0.00 4.02
5084 6356 0.826715 CTCTCACACCATCCGTCCAT 59.173 55.000 0.00 0.00 0.00 3.41
5085 6357 0.824109 TCTCACACCATCCGTCCATC 59.176 55.000 0.00 0.00 0.00 3.51
5160 6432 2.029666 ATAGCCTCGCGTGCATCC 59.970 61.111 21.58 3.00 0.00 3.51
5219 6492 1.138247 GCAACTGGCAGTAGCATGC 59.862 57.895 22.37 22.16 45.74 4.06
5229 6502 3.062763 GCAGTAGCATGCATGTAGTAGG 58.937 50.000 26.79 13.74 45.77 3.18
5230 6503 3.243873 GCAGTAGCATGCATGTAGTAGGA 60.244 47.826 26.79 3.27 45.77 2.94
5231 6504 4.554292 CAGTAGCATGCATGTAGTAGGAG 58.446 47.826 26.79 7.21 0.00 3.69
5232 6505 3.576118 AGTAGCATGCATGTAGTAGGAGG 59.424 47.826 26.79 0.00 0.00 4.30
5233 6506 2.682594 AGCATGCATGTAGTAGGAGGA 58.317 47.619 26.79 0.00 0.00 3.71
5234 6507 3.246301 AGCATGCATGTAGTAGGAGGAT 58.754 45.455 26.79 0.00 0.00 3.24
5235 6508 4.420206 AGCATGCATGTAGTAGGAGGATA 58.580 43.478 26.79 0.00 0.00 2.59
5236 6509 5.028802 AGCATGCATGTAGTAGGAGGATAT 58.971 41.667 26.79 0.00 0.00 1.63
5237 6510 5.105023 AGCATGCATGTAGTAGGAGGATATG 60.105 44.000 26.79 0.00 0.00 1.78
5238 6511 5.337894 GCATGCATGTAGTAGGAGGATATGT 60.338 44.000 26.79 0.00 0.00 2.29
5239 6512 6.127338 GCATGCATGTAGTAGGAGGATATGTA 60.127 42.308 26.79 0.00 0.00 2.29
5240 6513 7.418368 GCATGCATGTAGTAGGAGGATATGTAT 60.418 40.741 26.79 0.00 0.00 2.29
5241 6514 7.410120 TGCATGTAGTAGGAGGATATGTATG 57.590 40.000 0.00 0.00 0.00 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 6.992063 ATGTGGTTACAAGAATGTCATCTC 57.008 37.500 0.00 0.00 40.84 2.75
115 119 9.223099 GGAACCTTACTAATAGTTGCTACAAAA 57.777 33.333 0.00 0.00 0.00 2.44
119 123 5.461407 GCGGAACCTTACTAATAGTTGCTAC 59.539 44.000 0.00 0.00 0.00 3.58
121 125 4.081309 TGCGGAACCTTACTAATAGTTGCT 60.081 41.667 0.00 0.00 0.00 3.91
148 152 0.319040 CTAGATGATGTCCCGCGTGG 60.319 60.000 8.42 8.42 0.00 4.94
150 154 1.112113 AACTAGATGATGTCCCGCGT 58.888 50.000 4.92 0.00 0.00 6.01
152 156 4.883083 TGATAAACTAGATGATGTCCCGC 58.117 43.478 0.00 0.00 0.00 6.13
242 760 8.265998 CCCGCGAATTTAATTTGTAAAATGATC 58.734 33.333 8.23 0.00 0.00 2.92
249 767 5.568296 CGTTTCCCGCGAATTTAATTTGTAA 59.432 36.000 8.23 0.00 0.00 2.41
321 843 1.977544 AGAGAGGAACCCGACCACG 60.978 63.158 0.00 0.00 39.43 4.94
322 844 1.186267 ACAGAGAGGAACCCGACCAC 61.186 60.000 0.00 0.00 0.00 4.16
323 845 1.155390 ACAGAGAGGAACCCGACCA 59.845 57.895 0.00 0.00 0.00 4.02
325 847 1.592223 CCACAGAGAGGAACCCGAC 59.408 63.158 0.00 0.00 0.00 4.79
326 848 1.609501 CCCACAGAGAGGAACCCGA 60.610 63.158 0.00 0.00 0.00 5.14
327 849 2.982130 CCCACAGAGAGGAACCCG 59.018 66.667 0.00 0.00 0.00 5.28
329 851 2.671682 GGCCCACAGAGAGGAACC 59.328 66.667 0.00 0.00 0.00 3.62
330 852 2.266055 CGGCCCACAGAGAGGAAC 59.734 66.667 0.00 0.00 0.00 3.62
333 855 4.767255 GCACGGCCCACAGAGAGG 62.767 72.222 0.00 0.00 0.00 3.69
339 861 2.733319 TAAATCACGCACGGCCCACA 62.733 55.000 0.00 0.00 0.00 4.17
340 862 1.579084 TTAAATCACGCACGGCCCAC 61.579 55.000 0.00 0.00 0.00 4.61
341 863 1.302591 TTAAATCACGCACGGCCCA 60.303 52.632 0.00 0.00 0.00 5.36
342 864 1.135939 GTTAAATCACGCACGGCCC 59.864 57.895 0.00 0.00 0.00 5.80
343 865 0.519961 AAGTTAAATCACGCACGGCC 59.480 50.000 0.00 0.00 0.00 6.13
344 866 1.195900 TGAAGTTAAATCACGCACGGC 59.804 47.619 0.00 0.00 0.00 5.68
345 867 2.734606 TCTGAAGTTAAATCACGCACGG 59.265 45.455 0.00 0.00 0.00 4.94
346 868 3.673338 TCTCTGAAGTTAAATCACGCACG 59.327 43.478 0.00 0.00 0.00 5.34
347 869 5.348724 TGATCTCTGAAGTTAAATCACGCAC 59.651 40.000 0.00 0.00 0.00 5.34
348 870 5.478407 TGATCTCTGAAGTTAAATCACGCA 58.522 37.500 0.00 0.00 0.00 5.24
349 871 6.595772 ATGATCTCTGAAGTTAAATCACGC 57.404 37.500 0.00 0.00 0.00 5.34
350 872 9.831737 AAAAATGATCTCTGAAGTTAAATCACG 57.168 29.630 0.00 0.00 0.00 4.35
375 897 7.561021 TTGTGTCTGTACTGATGCTTAAAAA 57.439 32.000 5.69 0.00 0.00 1.94
376 898 6.293407 GCTTGTGTCTGTACTGATGCTTAAAA 60.293 38.462 5.69 0.00 0.00 1.52
377 899 5.179368 GCTTGTGTCTGTACTGATGCTTAAA 59.821 40.000 5.69 0.00 0.00 1.52
378 900 4.690748 GCTTGTGTCTGTACTGATGCTTAA 59.309 41.667 5.69 0.00 0.00 1.85
379 901 4.245660 GCTTGTGTCTGTACTGATGCTTA 58.754 43.478 5.69 0.00 0.00 3.09
380 902 3.070018 GCTTGTGTCTGTACTGATGCTT 58.930 45.455 5.69 0.00 0.00 3.91
381 903 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
382 904 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
383 905 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
384 906 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
385 907 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
386 908 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
387 909 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
388 910 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
389 911 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
390 912 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
391 913 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
392 914 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
393 915 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
394 916 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
395 917 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
396 918 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
397 919 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
398 920 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
399 921 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
402 924 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
403 925 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
404 926 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
405 927 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
406 928 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
407 929 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
408 930 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
409 931 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
410 932 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
411 933 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
412 934 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
413 935 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
414 936 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
415 937 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
416 938 3.118408 TGTTCATAGGGGTGAGTGTATGC 60.118 47.826 0.00 0.00 0.00 3.14
417 939 4.081142 TGTGTTCATAGGGGTGAGTGTATG 60.081 45.833 0.00 0.00 0.00 2.39
418 940 4.081087 GTGTGTTCATAGGGGTGAGTGTAT 60.081 45.833 0.00 0.00 0.00 2.29
419 941 3.259876 GTGTGTTCATAGGGGTGAGTGTA 59.740 47.826 0.00 0.00 0.00 2.90
420 942 2.038557 GTGTGTTCATAGGGGTGAGTGT 59.961 50.000 0.00 0.00 0.00 3.55
421 943 2.038426 TGTGTGTTCATAGGGGTGAGTG 59.962 50.000 0.00 0.00 0.00 3.51
422 944 2.038557 GTGTGTGTTCATAGGGGTGAGT 59.961 50.000 0.00 0.00 0.00 3.41
423 945 2.038426 TGTGTGTGTTCATAGGGGTGAG 59.962 50.000 0.00 0.00 0.00 3.51
424 946 2.050918 TGTGTGTGTTCATAGGGGTGA 58.949 47.619 0.00 0.00 0.00 4.02
425 947 2.559698 TGTGTGTGTTCATAGGGGTG 57.440 50.000 0.00 0.00 0.00 4.61
426 948 2.879756 GCATGTGTGTGTTCATAGGGGT 60.880 50.000 0.00 0.00 0.00 4.95
427 949 1.745087 GCATGTGTGTGTTCATAGGGG 59.255 52.381 0.00 0.00 0.00 4.79
428 950 2.162208 GTGCATGTGTGTGTTCATAGGG 59.838 50.000 0.00 0.00 0.00 3.53
429 951 2.813172 TGTGCATGTGTGTGTTCATAGG 59.187 45.455 0.00 0.00 0.00 2.57
430 952 3.365264 GGTGTGCATGTGTGTGTTCATAG 60.365 47.826 0.00 0.00 0.00 2.23
431 953 2.551887 GGTGTGCATGTGTGTGTTCATA 59.448 45.455 0.00 0.00 0.00 2.15
432 954 1.337703 GGTGTGCATGTGTGTGTTCAT 59.662 47.619 0.00 0.00 0.00 2.57
433 955 0.737804 GGTGTGCATGTGTGTGTTCA 59.262 50.000 0.00 0.00 0.00 3.18
434 956 0.030638 GGGTGTGCATGTGTGTGTTC 59.969 55.000 0.00 0.00 0.00 3.18
435 957 0.395586 AGGGTGTGCATGTGTGTGTT 60.396 50.000 0.00 0.00 0.00 3.32
436 958 0.472044 TAGGGTGTGCATGTGTGTGT 59.528 50.000 0.00 0.00 0.00 3.72
437 959 0.874390 GTAGGGTGTGCATGTGTGTG 59.126 55.000 0.00 0.00 0.00 3.82
438 960 0.250727 GGTAGGGTGTGCATGTGTGT 60.251 55.000 0.00 0.00 0.00 3.72
439 961 0.036732 AGGTAGGGTGTGCATGTGTG 59.963 55.000 0.00 0.00 0.00 3.82
440 962 0.324943 GAGGTAGGGTGTGCATGTGT 59.675 55.000 0.00 0.00 0.00 3.72
441 963 0.615331 AGAGGTAGGGTGTGCATGTG 59.385 55.000 0.00 0.00 0.00 3.21
442 964 2.247699 TAGAGGTAGGGTGTGCATGT 57.752 50.000 0.00 0.00 0.00 3.21
443 965 2.700371 TCATAGAGGTAGGGTGTGCATG 59.300 50.000 0.00 0.00 0.00 4.06
444 966 2.968574 CTCATAGAGGTAGGGTGTGCAT 59.031 50.000 0.00 0.00 0.00 3.96
445 967 2.388735 CTCATAGAGGTAGGGTGTGCA 58.611 52.381 0.00 0.00 0.00 4.57
446 968 1.069358 GCTCATAGAGGTAGGGTGTGC 59.931 57.143 0.00 0.00 0.00 4.57
447 969 2.101582 GTGCTCATAGAGGTAGGGTGTG 59.898 54.545 0.00 0.00 0.00 3.82
448 970 2.389715 GTGCTCATAGAGGTAGGGTGT 58.610 52.381 0.00 0.00 0.00 4.16
449 971 1.689273 GGTGCTCATAGAGGTAGGGTG 59.311 57.143 0.00 0.00 0.00 4.61
450 972 1.576272 AGGTGCTCATAGAGGTAGGGT 59.424 52.381 0.00 0.00 0.00 4.34
451 973 2.390225 AGGTGCTCATAGAGGTAGGG 57.610 55.000 0.00 0.00 0.00 3.53
452 974 2.294791 CGAAGGTGCTCATAGAGGTAGG 59.705 54.545 0.00 0.00 0.00 3.18
453 975 3.215151 TCGAAGGTGCTCATAGAGGTAG 58.785 50.000 0.00 0.00 0.00 3.18
454 976 3.292492 TCGAAGGTGCTCATAGAGGTA 57.708 47.619 0.00 0.00 0.00 3.08
455 977 2.145397 TCGAAGGTGCTCATAGAGGT 57.855 50.000 0.00 0.00 0.00 3.85
456 978 3.131223 TCTTTCGAAGGTGCTCATAGAGG 59.869 47.826 7.20 0.00 0.00 3.69
457 979 4.109050 GTCTTTCGAAGGTGCTCATAGAG 58.891 47.826 7.20 0.00 0.00 2.43
458 980 3.764434 AGTCTTTCGAAGGTGCTCATAGA 59.236 43.478 7.20 0.00 0.00 1.98
459 981 3.862267 CAGTCTTTCGAAGGTGCTCATAG 59.138 47.826 7.20 0.00 0.00 2.23
460 982 3.509967 TCAGTCTTTCGAAGGTGCTCATA 59.490 43.478 7.20 0.00 0.00 2.15
461 983 2.300152 TCAGTCTTTCGAAGGTGCTCAT 59.700 45.455 7.20 0.00 0.00 2.90
462 984 1.686587 TCAGTCTTTCGAAGGTGCTCA 59.313 47.619 7.20 0.00 0.00 4.26
463 985 2.333014 CTCAGTCTTTCGAAGGTGCTC 58.667 52.381 7.20 0.00 0.00 4.26
464 986 1.606737 GCTCAGTCTTTCGAAGGTGCT 60.607 52.381 7.20 4.49 0.00 4.40
465 987 0.793250 GCTCAGTCTTTCGAAGGTGC 59.207 55.000 7.20 2.27 0.00 5.01
466 988 1.433534 GGCTCAGTCTTTCGAAGGTG 58.566 55.000 7.20 0.00 0.00 4.00
467 989 0.038159 CGGCTCAGTCTTTCGAAGGT 60.038 55.000 7.20 0.00 0.00 3.50
468 990 0.737715 CCGGCTCAGTCTTTCGAAGG 60.738 60.000 0.00 0.00 0.00 3.46
469 991 1.355066 GCCGGCTCAGTCTTTCGAAG 61.355 60.000 22.15 0.00 0.00 3.79
470 992 1.374252 GCCGGCTCAGTCTTTCGAA 60.374 57.895 22.15 0.00 0.00 3.71
471 993 1.888436 ATGCCGGCTCAGTCTTTCGA 61.888 55.000 29.70 1.81 0.00 3.71
472 994 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
473 995 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
474 996 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
475 997 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
476 998 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
477 999 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
478 1000 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
479 1001 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
480 1002 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
481 1003 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
482 1004 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
483 1005 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
484 1006 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
485 1007 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
486 1008 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
487 1009 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
488 1010 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
489 1011 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
490 1012 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
491 1013 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
492 1014 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
493 1015 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
494 1016 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
495 1017 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
496 1018 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
497 1019 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
498 1020 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
499 1021 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
500 1022 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
501 1023 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
502 1024 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
503 1025 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
504 1026 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
505 1027 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
506 1028 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
507 1029 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
508 1030 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
511 1033 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
513 1035 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
516 1038 4.471726 AACGACGAGGCGCCTACG 62.472 66.667 32.91 32.91 44.07 3.51
517 1039 2.879462 CAACGACGAGGCGCCTAC 60.879 66.667 32.97 22.05 33.86 3.18
518 1040 3.057548 TCAACGACGAGGCGCCTA 61.058 61.111 32.97 8.37 33.86 3.93
519 1041 4.719369 GTCAACGACGAGGCGCCT 62.719 66.667 33.48 33.48 33.86 5.52
536 1058 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
537 1059 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
538 1060 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
539 1061 1.420430 TTCAGTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
540 1062 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
541 1063 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
542 1064 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
543 1065 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
544 1066 0.832135 ACGCTTTCAGTGGGAGGAGA 60.832 55.000 0.00 0.00 0.00 3.71
545 1067 0.895530 TACGCTTTCAGTGGGAGGAG 59.104 55.000 0.00 0.00 0.00 3.69
546 1068 1.480954 GATACGCTTTCAGTGGGAGGA 59.519 52.381 0.00 0.00 0.00 3.71
547 1069 1.802880 CGATACGCTTTCAGTGGGAGG 60.803 57.143 0.00 0.00 0.00 4.30
548 1070 1.560923 CGATACGCTTTCAGTGGGAG 58.439 55.000 0.00 0.00 0.00 4.30
549 1071 3.733236 CGATACGCTTTCAGTGGGA 57.267 52.632 0.00 0.00 0.00 4.37
561 1083 1.847818 TCAGGATTTTCGGCGATACG 58.152 50.000 11.76 0.00 0.00 3.06
562 1084 4.813296 ATTTCAGGATTTTCGGCGATAC 57.187 40.909 11.76 0.00 0.00 2.24
563 1085 6.928979 TTTATTTCAGGATTTTCGGCGATA 57.071 33.333 11.76 2.15 0.00 2.92
564 1086 5.828299 TTTATTTCAGGATTTTCGGCGAT 57.172 34.783 11.76 0.00 0.00 4.58
565 1087 5.220970 GGATTTATTTCAGGATTTTCGGCGA 60.221 40.000 4.99 4.99 0.00 5.54
566 1088 4.976116 GGATTTATTTCAGGATTTTCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
567 1089 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
568 1090 7.771183 TCTTGGATTTATTTCAGGATTTTCGG 58.229 34.615 0.00 0.00 0.00 4.30
569 1091 9.807649 ATTCTTGGATTTATTTCAGGATTTTCG 57.192 29.630 0.00 0.00 0.00 3.46
575 1097 9.425248 AGCATTATTCTTGGATTTATTTCAGGA 57.575 29.630 0.00 0.00 0.00 3.86
582 1104 9.812347 TGGTGATAGCATTATTCTTGGATTTAT 57.188 29.630 0.00 0.00 0.00 1.40
583 1105 9.288576 CTGGTGATAGCATTATTCTTGGATTTA 57.711 33.333 0.00 0.00 0.00 1.40
584 1106 7.232127 CCTGGTGATAGCATTATTCTTGGATTT 59.768 37.037 0.00 0.00 0.00 2.17
585 1107 6.718454 CCTGGTGATAGCATTATTCTTGGATT 59.282 38.462 0.00 0.00 0.00 3.01
586 1108 6.044754 TCCTGGTGATAGCATTATTCTTGGAT 59.955 38.462 0.00 0.00 0.00 3.41
587 1109 5.369404 TCCTGGTGATAGCATTATTCTTGGA 59.631 40.000 0.00 0.00 0.00 3.53
588 1110 5.624159 TCCTGGTGATAGCATTATTCTTGG 58.376 41.667 0.00 0.00 0.00 3.61
589 1111 7.756395 AATCCTGGTGATAGCATTATTCTTG 57.244 36.000 0.00 0.00 31.83 3.02
590 1112 8.000709 TCAAATCCTGGTGATAGCATTATTCTT 58.999 33.333 0.00 0.00 31.83 2.52
591 1113 7.520798 TCAAATCCTGGTGATAGCATTATTCT 58.479 34.615 0.00 0.00 31.83 2.40
592 1114 7.750229 TCAAATCCTGGTGATAGCATTATTC 57.250 36.000 0.00 0.00 31.83 1.75
593 1115 8.582437 CATTCAAATCCTGGTGATAGCATTATT 58.418 33.333 0.00 0.00 31.83 1.40
594 1116 7.309621 GCATTCAAATCCTGGTGATAGCATTAT 60.310 37.037 0.00 0.00 31.83 1.28
595 1117 6.016024 GCATTCAAATCCTGGTGATAGCATTA 60.016 38.462 0.00 0.00 31.83 1.90
596 1118 5.221382 GCATTCAAATCCTGGTGATAGCATT 60.221 40.000 0.00 0.00 31.83 3.56
597 1119 4.280174 GCATTCAAATCCTGGTGATAGCAT 59.720 41.667 0.00 0.00 31.83 3.79
598 1120 3.633525 GCATTCAAATCCTGGTGATAGCA 59.366 43.478 0.00 0.00 31.83 3.49
599 1121 3.887716 AGCATTCAAATCCTGGTGATAGC 59.112 43.478 0.00 0.00 31.83 2.97
600 1122 5.128205 TCAGCATTCAAATCCTGGTGATAG 58.872 41.667 0.00 0.00 41.11 2.08
601 1123 5.114764 TCAGCATTCAAATCCTGGTGATA 57.885 39.130 0.00 0.00 41.11 2.15
602 1124 3.972133 TCAGCATTCAAATCCTGGTGAT 58.028 40.909 0.00 0.00 41.11 3.06
603 1125 3.438216 TCAGCATTCAAATCCTGGTGA 57.562 42.857 0.00 0.00 43.04 4.02
604 1126 3.181479 CCATCAGCATTCAAATCCTGGTG 60.181 47.826 0.69 0.69 39.20 4.17
605 1127 3.028850 CCATCAGCATTCAAATCCTGGT 58.971 45.455 0.00 0.00 0.00 4.00
606 1128 2.364324 CCCATCAGCATTCAAATCCTGG 59.636 50.000 0.00 0.00 0.00 4.45
607 1129 3.028850 ACCCATCAGCATTCAAATCCTG 58.971 45.455 0.00 0.00 0.00 3.86
608 1130 3.393426 ACCCATCAGCATTCAAATCCT 57.607 42.857 0.00 0.00 0.00 3.24
609 1131 5.596836 TTAACCCATCAGCATTCAAATCC 57.403 39.130 0.00 0.00 0.00 3.01
610 1132 6.866480 TCTTTAACCCATCAGCATTCAAATC 58.134 36.000 0.00 0.00 0.00 2.17
611 1133 6.855763 TCTTTAACCCATCAGCATTCAAAT 57.144 33.333 0.00 0.00 0.00 2.32
612 1134 6.855763 ATCTTTAACCCATCAGCATTCAAA 57.144 33.333 0.00 0.00 0.00 2.69
613 1135 6.321181 GGTATCTTTAACCCATCAGCATTCAA 59.679 38.462 0.00 0.00 0.00 2.69
614 1136 5.827797 GGTATCTTTAACCCATCAGCATTCA 59.172 40.000 0.00 0.00 0.00 2.57
615 1137 5.827797 TGGTATCTTTAACCCATCAGCATTC 59.172 40.000 0.00 0.00 36.06 2.67
616 1138 5.594317 GTGGTATCTTTAACCCATCAGCATT 59.406 40.000 0.00 0.00 36.06 3.56
617 1139 5.103940 AGTGGTATCTTTAACCCATCAGCAT 60.104 40.000 0.00 0.00 36.06 3.79
618 1140 4.227300 AGTGGTATCTTTAACCCATCAGCA 59.773 41.667 0.00 0.00 36.06 4.41
619 1141 4.781934 AGTGGTATCTTTAACCCATCAGC 58.218 43.478 0.00 0.00 36.06 4.26
620 1142 8.210946 TGAATAGTGGTATCTTTAACCCATCAG 58.789 37.037 0.00 0.00 36.06 2.90
621 1143 7.990886 GTGAATAGTGGTATCTTTAACCCATCA 59.009 37.037 0.00 0.00 36.06 3.07
622 1144 7.444487 GGTGAATAGTGGTATCTTTAACCCATC 59.556 40.741 0.00 0.00 36.06 3.51
623 1145 7.128883 AGGTGAATAGTGGTATCTTTAACCCAT 59.871 37.037 0.00 0.00 36.06 4.00
624 1146 6.445786 AGGTGAATAGTGGTATCTTTAACCCA 59.554 38.462 0.00 0.00 36.06 4.51
625 1147 6.896883 AGGTGAATAGTGGTATCTTTAACCC 58.103 40.000 0.00 0.00 36.06 4.11
626 1148 9.322773 GTTAGGTGAATAGTGGTATCTTTAACC 57.677 37.037 0.00 0.00 37.53 2.85
627 1149 9.322773 GGTTAGGTGAATAGTGGTATCTTTAAC 57.677 37.037 0.00 0.00 0.00 2.01
628 1150 9.049050 TGGTTAGGTGAATAGTGGTATCTTTAA 57.951 33.333 0.00 0.00 0.00 1.52
629 1151 8.612486 TGGTTAGGTGAATAGTGGTATCTTTA 57.388 34.615 0.00 0.00 0.00 1.85
630 1152 7.504926 TGGTTAGGTGAATAGTGGTATCTTT 57.495 36.000 0.00 0.00 0.00 2.52
631 1153 7.182206 AGTTGGTTAGGTGAATAGTGGTATCTT 59.818 37.037 0.00 0.00 0.00 2.40
632 1154 6.672657 AGTTGGTTAGGTGAATAGTGGTATCT 59.327 38.462 0.00 0.00 0.00 1.98
633 1155 6.885922 AGTTGGTTAGGTGAATAGTGGTATC 58.114 40.000 0.00 0.00 0.00 2.24
634 1156 6.442564 TGAGTTGGTTAGGTGAATAGTGGTAT 59.557 38.462 0.00 0.00 0.00 2.73
635 1157 5.781306 TGAGTTGGTTAGGTGAATAGTGGTA 59.219 40.000 0.00 0.00 0.00 3.25
636 1158 4.595781 TGAGTTGGTTAGGTGAATAGTGGT 59.404 41.667 0.00 0.00 0.00 4.16
637 1159 5.160607 TGAGTTGGTTAGGTGAATAGTGG 57.839 43.478 0.00 0.00 0.00 4.00
638 1160 5.411669 GGTTGAGTTGGTTAGGTGAATAGTG 59.588 44.000 0.00 0.00 0.00 2.74
639 1161 5.072600 TGGTTGAGTTGGTTAGGTGAATAGT 59.927 40.000 0.00 0.00 0.00 2.12
640 1162 5.411669 GTGGTTGAGTTGGTTAGGTGAATAG 59.588 44.000 0.00 0.00 0.00 1.73
641 1163 5.163184 TGTGGTTGAGTTGGTTAGGTGAATA 60.163 40.000 0.00 0.00 0.00 1.75
642 1164 4.142038 GTGGTTGAGTTGGTTAGGTGAAT 58.858 43.478 0.00 0.00 0.00 2.57
643 1165 3.054287 TGTGGTTGAGTTGGTTAGGTGAA 60.054 43.478 0.00 0.00 0.00 3.18
644 1166 2.506231 TGTGGTTGAGTTGGTTAGGTGA 59.494 45.455 0.00 0.00 0.00 4.02
645 1167 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
646 1168 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
647 1169 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
648 1170 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
649 1171 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
650 1172 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
660 1182 0.949105 GTCGCGAATCAACCTGTGGT 60.949 55.000 12.06 0.00 37.65 4.16
661 1183 0.670546 AGTCGCGAATCAACCTGTGG 60.671 55.000 12.06 0.00 0.00 4.17
662 1184 1.126846 GAAGTCGCGAATCAACCTGTG 59.873 52.381 12.06 0.00 0.00 3.66
663 1185 1.270094 TGAAGTCGCGAATCAACCTGT 60.270 47.619 19.92 0.00 0.00 4.00
664 1186 1.391485 CTGAAGTCGCGAATCAACCTG 59.609 52.381 21.71 10.23 0.00 4.00
665 1187 1.272490 TCTGAAGTCGCGAATCAACCT 59.728 47.619 21.71 7.91 0.00 3.50
666 1188 1.656095 CTCTGAAGTCGCGAATCAACC 59.344 52.381 21.71 5.77 0.00 3.77
667 1189 2.596452 TCTCTGAAGTCGCGAATCAAC 58.404 47.619 21.71 12.54 0.00 3.18
668 1190 3.119495 TGATCTCTGAAGTCGCGAATCAA 60.119 43.478 21.71 11.34 0.00 2.57
669 1191 2.423538 TGATCTCTGAAGTCGCGAATCA 59.576 45.455 20.62 20.62 0.00 2.57
670 1192 3.071786 TGATCTCTGAAGTCGCGAATC 57.928 47.619 12.06 13.57 0.00 2.52
671 1193 3.724508 ATGATCTCTGAAGTCGCGAAT 57.275 42.857 12.06 6.90 0.00 3.34
672 1194 3.510388 AATGATCTCTGAAGTCGCGAA 57.490 42.857 12.06 0.00 0.00 4.70
673 1195 3.510388 AAATGATCTCTGAAGTCGCGA 57.490 42.857 3.71 3.71 0.00 5.87
674 1196 3.614176 TCAAAATGATCTCTGAAGTCGCG 59.386 43.478 0.00 0.00 0.00 5.87
675 1197 4.867047 TCTCAAAATGATCTCTGAAGTCGC 59.133 41.667 0.00 0.00 0.00 5.19
681 1203 3.055891 TGGCGTCTCAAAATGATCTCTGA 60.056 43.478 0.00 0.00 0.00 3.27
1099 1642 1.199615 GACAGAGGAGGGGAGAAAGG 58.800 60.000 0.00 0.00 0.00 3.11
1196 1739 8.687824 TGAAAGAAAAACTCAATTTCACAGAC 57.312 30.769 2.32 0.00 38.86 3.51
1234 1777 9.796120 CACAACAAATTTCTAGTCTGGTTAAAA 57.204 29.630 0.00 0.00 0.00 1.52
1235 1778 8.410141 CCACAACAAATTTCTAGTCTGGTTAAA 58.590 33.333 0.00 0.00 0.00 1.52
1241 1784 6.867662 ACTCCACAACAAATTTCTAGTCTG 57.132 37.500 0.00 0.00 0.00 3.51
1266 1809 4.181578 ACTATCGAAAACCCATTCTGACG 58.818 43.478 0.00 0.00 0.00 4.35
1312 1855 2.914861 TCGAATGCAAACGTTCACATG 58.085 42.857 14.57 5.22 41.15 3.21
1338 1881 5.011635 TCAGAGTAACAGGTATGAGTTTGCA 59.988 40.000 0.00 0.00 0.00 4.08
1393 1936 3.442625 TCAATCTCCGATTCACAGTACGT 59.557 43.478 0.00 0.00 0.00 3.57
1406 1949 7.330454 CCAGTACTGATCATTTATCAATCTCCG 59.670 40.741 24.68 0.00 44.05 4.63
1553 2096 7.582435 AAATACCTATTTCGCAGATGTATCG 57.418 36.000 0.00 0.00 35.04 2.92
1678 2221 3.369147 CACAAGGAGTTAGCTGTTCATCG 59.631 47.826 0.00 0.00 0.00 3.84
1756 2330 7.820648 ACTTTGCATAGTTTCATTTCACCTAG 58.179 34.615 3.73 0.00 0.00 3.02
1828 2402 4.481930 TCAACGTTGGTAGCAATTGAAG 57.518 40.909 27.02 7.87 0.00 3.02
1830 2404 5.645929 ACATATCAACGTTGGTAGCAATTGA 59.354 36.000 27.02 20.17 0.00 2.57
2031 2607 9.399797 TCTAAACAATATGACAAAGCTCATGAT 57.600 29.630 0.00 0.00 32.86 2.45
2247 2824 6.294934 ACCCTTTGGAGGAGCTTAAGCTTT 62.295 45.833 29.84 20.95 46.74 3.51
2385 2963 7.282675 TGCAAAGGAATGTCATCAACAAAATTT 59.717 29.630 0.00 0.00 42.37 1.82
2403 2981 6.423776 AGAATTCCTGAAAAATGCAAAGGA 57.576 33.333 0.65 0.00 35.24 3.36
2703 3290 6.380095 AATGTAAGACGTTTTGGCAGTTAA 57.620 33.333 0.83 0.00 0.00 2.01
2749 3342 5.063204 CCCTCTGTTCACAAATGTAAGACA 58.937 41.667 0.00 0.00 0.00 3.41
2750 3343 5.049405 CACCCTCTGTTCACAAATGTAAGAC 60.049 44.000 0.00 0.00 0.00 3.01
2781 3374 7.891561 TGGACCATTTCATTTTACAAGGTTAG 58.108 34.615 0.00 0.00 0.00 2.34
2786 3379 7.432869 TCACTTGGACCATTTCATTTTACAAG 58.567 34.615 0.00 0.00 38.85 3.16
2838 3431 3.118629 AGGACGGTACTATGTACGAGACA 60.119 47.826 0.00 0.00 43.97 3.41
2839 3432 3.247173 CAGGACGGTACTATGTACGAGAC 59.753 52.174 0.00 0.00 0.00 3.36
2840 3433 3.461061 CAGGACGGTACTATGTACGAGA 58.539 50.000 0.00 0.00 0.00 4.04
2841 3434 2.547211 CCAGGACGGTACTATGTACGAG 59.453 54.545 0.00 0.00 0.00 4.18
2842 3435 2.564771 CCAGGACGGTACTATGTACGA 58.435 52.381 0.00 0.00 0.00 3.43
2887 3481 7.114811 GCTCAGTTGTGTTTACATTTACAATGG 59.885 37.037 1.72 0.00 36.53 3.16
3468 4063 9.173021 CTAATCTTGATTATGTACACCCAACAA 57.827 33.333 0.00 1.24 0.00 2.83
3560 4155 4.398044 ACCACACACAAAGAAAACAGTAGG 59.602 41.667 0.00 0.00 0.00 3.18
3909 4504 1.588082 CAACAGCCTTGCCCATGTC 59.412 57.895 0.00 0.00 0.00 3.06
4074 4669 0.537371 ACAAGCTCCGGGGAAAGTTG 60.537 55.000 4.80 4.93 0.00 3.16
4106 4701 4.115270 TGCCTTGAATGCATGCCA 57.885 50.000 16.68 2.66 32.85 4.92
4200 4795 3.103213 ATGGCCGCCCCCATTAGT 61.103 61.111 7.03 0.00 42.92 2.24
4245 4840 3.394674 TCTGTAGCATTCCGTTTGTGA 57.605 42.857 0.00 0.00 0.00 3.58
4304 4899 1.896220 TGGTGCTCCATTCAGAACAC 58.104 50.000 2.64 0.00 39.03 3.32
4327 4922 2.969821 TCCTGCCACAACTGGTAAAT 57.030 45.000 0.00 0.00 40.17 1.40
4393 4988 2.436646 GTCTGATGCACCACCGGG 60.437 66.667 6.32 0.00 41.29 5.73
4398 4993 0.320683 CTGAACGGTCTGATGCACCA 60.321 55.000 0.33 0.00 32.89 4.17
4417 5012 0.592247 CACGCACAACAACAGAAGCC 60.592 55.000 0.00 0.00 0.00 4.35
4433 5028 5.061684 TCGAGCTATTATCACAACAAACACG 59.938 40.000 0.00 0.00 0.00 4.49
4456 5066 3.787001 CGGGAAGGGTGGGAGCTC 61.787 72.222 4.71 4.71 0.00 4.09
4579 5199 0.251341 CCTTCAGTCAAACCAGGGGG 60.251 60.000 0.00 0.00 41.29 5.40
4580 5200 0.771127 TCCTTCAGTCAAACCAGGGG 59.229 55.000 0.00 0.00 0.00 4.79
4581 5201 1.271597 CCTCCTTCAGTCAAACCAGGG 60.272 57.143 0.00 0.00 0.00 4.45
4582 5202 1.421646 ACCTCCTTCAGTCAAACCAGG 59.578 52.381 0.00 0.00 0.00 4.45
4583 5203 2.104792 TCACCTCCTTCAGTCAAACCAG 59.895 50.000 0.00 0.00 0.00 4.00
4584 5204 2.104792 CTCACCTCCTTCAGTCAAACCA 59.895 50.000 0.00 0.00 0.00 3.67
4585 5205 2.551071 CCTCACCTCCTTCAGTCAAACC 60.551 54.545 0.00 0.00 0.00 3.27
4586 5206 2.772287 CCTCACCTCCTTCAGTCAAAC 58.228 52.381 0.00 0.00 0.00 2.93
4587 5207 1.072331 GCCTCACCTCCTTCAGTCAAA 59.928 52.381 0.00 0.00 0.00 2.69
4588 5208 0.687354 GCCTCACCTCCTTCAGTCAA 59.313 55.000 0.00 0.00 0.00 3.18
4589 5209 1.536073 CGCCTCACCTCCTTCAGTCA 61.536 60.000 0.00 0.00 0.00 3.41
4590 5210 1.216710 CGCCTCACCTCCTTCAGTC 59.783 63.158 0.00 0.00 0.00 3.51
4591 5211 0.251653 TACGCCTCACCTCCTTCAGT 60.252 55.000 0.00 0.00 0.00 3.41
4592 5212 1.115467 ATACGCCTCACCTCCTTCAG 58.885 55.000 0.00 0.00 0.00 3.02
4593 5213 1.568504 AATACGCCTCACCTCCTTCA 58.431 50.000 0.00 0.00 0.00 3.02
4594 5214 2.693267 AAATACGCCTCACCTCCTTC 57.307 50.000 0.00 0.00 0.00 3.46
4595 5215 4.163458 TGATTAAATACGCCTCACCTCCTT 59.837 41.667 0.00 0.00 0.00 3.36
4626 5611 6.039270 ACAGCTCAGATTACACTCAGAGATAC 59.961 42.308 3.79 0.00 32.22 2.24
4633 5618 4.039124 TCAACACAGCTCAGATTACACTCA 59.961 41.667 0.00 0.00 0.00 3.41
4696 5926 5.396436 CCCTTGTTCATTAGGACGTAGGAAT 60.396 44.000 0.00 0.00 33.13 3.01
4705 5943 1.681229 AGGGCCCTTGTTCATTAGGA 58.319 50.000 22.28 0.00 33.13 2.94
4712 5950 2.289565 CTCGATTAAGGGCCCTTGTTC 58.710 52.381 41.96 33.45 37.47 3.18
4715 5953 0.181350 AGCTCGATTAAGGGCCCTTG 59.819 55.000 41.96 27.30 38.69 3.61
4716 5954 0.919710 AAGCTCGATTAAGGGCCCTT 59.080 50.000 38.44 38.44 38.69 3.95
4786 6024 4.025858 GCCAGACAGCCAGAGCCA 62.026 66.667 0.00 0.00 41.25 4.75
4849 6087 2.100631 GGCAGGATTCGTGACACCG 61.101 63.158 10.43 0.00 0.00 4.94
4896 6155 1.282570 GCAACGTGGACACATGTGG 59.717 57.895 28.64 13.47 45.80 4.17
4926 6186 0.532115 ATTGATTTGCCGTTCCAGCC 59.468 50.000 0.00 0.00 0.00 4.85
4927 6187 1.469767 GGATTGATTTGCCGTTCCAGC 60.470 52.381 0.00 0.00 0.00 4.85
4977 6249 2.663879 GCATAGTATGTGCGCTGATTGC 60.664 50.000 9.73 3.55 38.57 3.56
4978 6250 2.545106 TGCATAGTATGTGCGCTGATTG 59.455 45.455 9.73 0.00 45.37 2.67
4979 6251 2.804527 CTGCATAGTATGTGCGCTGATT 59.195 45.455 9.73 0.00 45.37 2.57
4980 6252 2.410939 CTGCATAGTATGTGCGCTGAT 58.589 47.619 9.73 2.60 45.37 2.90
4981 6253 1.538849 CCTGCATAGTATGTGCGCTGA 60.539 52.381 9.73 0.00 45.37 4.26
4982 6254 0.863799 CCTGCATAGTATGTGCGCTG 59.136 55.000 9.73 0.00 45.37 5.18
4983 6255 0.882042 GCCTGCATAGTATGTGCGCT 60.882 55.000 9.73 0.00 45.37 5.92
4984 6256 1.159713 TGCCTGCATAGTATGTGCGC 61.160 55.000 11.73 0.00 45.37 6.09
4985 6257 0.583438 GTGCCTGCATAGTATGTGCG 59.417 55.000 11.73 0.92 45.37 5.34
4986 6258 0.583438 CGTGCCTGCATAGTATGTGC 59.417 55.000 11.73 11.86 42.81 4.57
4987 6259 1.939974 ACGTGCCTGCATAGTATGTG 58.060 50.000 11.73 5.38 0.00 3.21
4988 6260 2.691409 AACGTGCCTGCATAGTATGT 57.309 45.000 11.73 0.00 0.00 2.29
4989 6261 3.198068 AGAAACGTGCCTGCATAGTATG 58.802 45.455 5.73 5.73 0.00 2.39
4990 6262 3.458189 GAGAAACGTGCCTGCATAGTAT 58.542 45.455 0.00 0.00 0.00 2.12
4991 6263 2.734175 CGAGAAACGTGCCTGCATAGTA 60.734 50.000 0.00 0.00 37.22 1.82
4992 6264 1.726853 GAGAAACGTGCCTGCATAGT 58.273 50.000 0.00 0.00 0.00 2.12
4993 6265 0.647410 CGAGAAACGTGCCTGCATAG 59.353 55.000 0.00 0.00 37.22 2.23
5016 6288 4.475135 GCCTTCCTGGTCGGCTCC 62.475 72.222 17.62 0.00 40.62 4.70
5044 6316 3.188786 GCCACTGTCGCATCGTCC 61.189 66.667 0.00 0.00 0.00 4.79
5074 6346 1.339438 GGATGGATGGATGGACGGATG 60.339 57.143 0.00 0.00 0.00 3.51
5075 6347 0.987294 GGATGGATGGATGGACGGAT 59.013 55.000 0.00 0.00 0.00 4.18
5076 6348 0.104986 AGGATGGATGGATGGACGGA 60.105 55.000 0.00 0.00 0.00 4.69
5077 6349 1.552337 CTAGGATGGATGGATGGACGG 59.448 57.143 0.00 0.00 0.00 4.79
5078 6350 2.251818 ACTAGGATGGATGGATGGACG 58.748 52.381 0.00 0.00 0.00 4.79
5079 6351 4.421131 AGTACTAGGATGGATGGATGGAC 58.579 47.826 0.00 0.00 0.00 4.02
5080 6352 4.767000 AGTACTAGGATGGATGGATGGA 57.233 45.455 0.00 0.00 0.00 3.41
5081 6353 4.019860 CCAAGTACTAGGATGGATGGATGG 60.020 50.000 5.51 0.00 34.82 3.51
5082 6354 4.594920 ACCAAGTACTAGGATGGATGGATG 59.405 45.833 16.58 0.00 36.75 3.51
5083 6355 4.832492 ACCAAGTACTAGGATGGATGGAT 58.168 43.478 16.58 0.00 36.75 3.41
5084 6356 4.223953 GACCAAGTACTAGGATGGATGGA 58.776 47.826 16.58 0.00 36.75 3.41
5085 6357 3.005897 CGACCAAGTACTAGGATGGATGG 59.994 52.174 16.58 10.69 36.75 3.51
5129 6401 0.883833 GGCTATGATGGGAAATGGCG 59.116 55.000 0.00 0.00 31.55 5.69
5160 6432 3.740321 CCCACCGTTTTGATTTTGATGTG 59.260 43.478 0.00 0.00 0.00 3.21
5211 6484 3.574396 TCCTCCTACTACATGCATGCTAC 59.426 47.826 26.53 0.00 0.00 3.58
5217 6490 7.410120 CATACATATCCTCCTACTACATGCA 57.590 40.000 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.