Multiple sequence alignment - TraesCS7A01G259600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G259600 chr7A 100.000 4121 0 0 1 4121 251474197 251478317 0.000000e+00 7611.0
1 TraesCS7A01G259600 chr7B 94.930 2643 98 15 513 3132 212828245 212830874 0.000000e+00 4106.0
2 TraesCS7A01G259600 chr7B 84.926 272 34 4 3129 3393 484271160 484271431 6.790000e-68 268.0
3 TraesCS7A01G259600 chr7B 83.908 174 21 4 62 235 649987790 649987956 4.260000e-35 159.0
4 TraesCS7A01G259600 chr7B 87.970 133 16 0 3989 4121 212896554 212896686 1.530000e-34 158.0
5 TraesCS7A01G259600 chr7D 94.059 2424 95 19 599 3002 236519088 236521482 0.000000e+00 3633.0
6 TraesCS7A01G259600 chr7D 91.553 438 31 3 155 592 236518090 236518521 2.120000e-167 599.0
7 TraesCS7A01G259600 chr7D 79.896 577 56 40 3563 4104 236578044 236578595 6.510000e-98 368.0
8 TraesCS7A01G259600 chr7D 95.833 120 5 0 1 120 236517125 236517244 1.170000e-45 195.0
9 TraesCS7A01G259600 chr7D 82.258 186 21 7 56 235 582161214 582161393 2.570000e-32 150.0
10 TraesCS7A01G259600 chr7D 81.675 191 25 5 49 235 625502988 625503172 2.570000e-32 150.0
11 TraesCS7A01G259600 chr7D 93.506 77 3 1 3122 3198 75346783 75346857 3.370000e-21 113.0
12 TraesCS7A01G259600 chr5B 89.529 191 18 2 3201 3389 667842970 667842780 1.480000e-59 241.0
13 TraesCS7A01G259600 chr2A 89.529 191 18 2 3203 3392 459017117 459017306 1.480000e-59 241.0
14 TraesCS7A01G259600 chr4B 88.776 196 21 1 3201 3395 134410350 134410155 5.320000e-59 239.0
15 TraesCS7A01G259600 chr4B 86.957 138 15 2 3129 3263 106548735 106548598 7.140000e-33 152.0
16 TraesCS7A01G259600 chr4B 85.039 127 16 2 3129 3252 637664725 637664851 4.320000e-25 126.0
17 TraesCS7A01G259600 chr4B 94.444 72 4 0 3127 3198 20004762 20004691 1.210000e-20 111.0
18 TraesCS7A01G259600 chr1D 89.119 193 19 2 3201 3392 348987024 348986833 5.320000e-59 239.0
19 TraesCS7A01G259600 chr5D 88.776 196 19 3 3201 3395 300162086 300161893 1.910000e-58 237.0
20 TraesCS7A01G259600 chr5D 88.000 200 21 3 3201 3399 485887242 485887439 2.480000e-57 233.0
21 TraesCS7A01G259600 chr5D 83.761 117 17 2 230 344 110351729 110351613 4.360000e-20 110.0
22 TraesCS7A01G259600 chr4A 89.062 192 20 1 3201 3391 521958135 521958326 1.910000e-58 237.0
23 TraesCS7A01G259600 chr2B 81.919 271 38 8 3127 3392 72900581 72900845 6.940000e-53 219.0
24 TraesCS7A01G259600 chr2D 77.083 288 54 9 49 332 50102009 50101730 5.520000e-34 156.0
25 TraesCS7A01G259600 chr6D 80.882 204 27 9 49 247 472672790 472672594 2.570000e-32 150.0
26 TraesCS7A01G259600 chr5A 80.000 210 31 10 233 439 116694445 116694646 1.190000e-30 145.0
27 TraesCS7A01G259600 chr5A 79.524 210 32 10 233 439 116773777 116773978 5.550000e-29 139.0
28 TraesCS7A01G259600 chr5A 81.143 175 25 6 266 439 116774360 116774527 2.580000e-27 134.0
29 TraesCS7A01G259600 chr5A 80.571 175 26 6 266 439 116695028 116695195 1.200000e-25 128.0
30 TraesCS7A01G259600 chr5A 90.123 81 6 2 3120 3198 426945294 426945374 2.030000e-18 104.0
31 TraesCS7A01G259600 chr1B 86.822 129 13 3 3129 3254 82337559 82337432 1.540000e-29 141.0
32 TraesCS7A01G259600 chr6B 86.047 129 15 2 3129 3254 143925447 143925319 7.190000e-28 135.0
33 TraesCS7A01G259600 chr3B 78.723 188 33 6 49 235 15106491 15106310 7.240000e-23 119.0
34 TraesCS7A01G259600 chr1A 80.000 165 23 9 49 212 571340858 571340703 3.370000e-21 113.0
35 TraesCS7A01G259600 chr1A 77.778 189 31 10 49 235 493288028 493288207 5.630000e-19 106.0
36 TraesCS7A01G259600 chr3A 91.304 46 3 1 237 282 20147107 20147151 1.240000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G259600 chr7A 251474197 251478317 4120 False 7611.000000 7611 100.000 1 4121 1 chr7A.!!$F1 4120
1 TraesCS7A01G259600 chr7B 212828245 212830874 2629 False 4106.000000 4106 94.930 513 3132 1 chr7B.!!$F1 2619
2 TraesCS7A01G259600 chr7D 236517125 236521482 4357 False 1475.666667 3633 93.815 1 3002 3 chr7D.!!$F5 3001
3 TraesCS7A01G259600 chr7D 236578044 236578595 551 False 368.000000 368 79.896 3563 4104 1 chr7D.!!$F2 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
699 2075 1.525995 CAACCGTCCAAGCACCACT 60.526 57.895 0.0 0.0 0.00 4.00 F
1361 2755 0.028505 CGTCGTCGTCCGGTATGATT 59.971 55.000 0.0 0.0 37.11 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 3562 0.183731 GGTTCATGGGGTGGATCTCC 59.816 60.0 0.00 0.0 37.17 3.71 R
3139 4557 0.025513 GAGCGCTTGCGTCTGTATTG 59.974 55.0 13.26 0.0 45.69 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 7.436673 TTGTTTTCAAAATACAGTATGTGCCAC 59.563 33.333 0.00 0.00 43.29 5.01
151 577 4.923281 GCCACGAGCATTCTTAAATTTGTT 59.077 37.500 0.00 0.00 42.97 2.83
152 578 5.405269 GCCACGAGCATTCTTAAATTTGTTT 59.595 36.000 0.00 0.00 42.97 2.83
158 970 7.528182 CGAGCATTCTTAAATTTGTTTTTGCAG 59.472 33.333 15.13 8.19 31.43 4.41
210 1022 5.587043 TGCATATGTTTTACTAAGGTTCCCG 59.413 40.000 4.29 0.00 0.00 5.14
214 1026 4.400120 TGTTTTACTAAGGTTCCCGCAAT 58.600 39.130 0.00 0.00 0.00 3.56
311 1123 7.722795 TCACATTACCAAATATACCACATCG 57.277 36.000 0.00 0.00 0.00 3.84
313 1125 7.771361 TCACATTACCAAATATACCACATCGTT 59.229 33.333 0.00 0.00 0.00 3.85
336 1148 9.646336 CGTTATCCACTAACAATATTTTGTAGC 57.354 33.333 1.76 0.00 45.30 3.58
339 1151 7.987750 TCCACTAACAATATTTTGTAGCACA 57.012 32.000 1.76 0.00 45.30 4.57
340 1152 8.574251 TCCACTAACAATATTTTGTAGCACAT 57.426 30.769 1.76 0.00 45.30 3.21
341 1153 8.458052 TCCACTAACAATATTTTGTAGCACATG 58.542 33.333 1.76 0.00 45.30 3.21
342 1154 7.220683 CCACTAACAATATTTTGTAGCACATGC 59.779 37.037 1.76 0.00 45.30 4.06
343 1155 7.754475 CACTAACAATATTTTGTAGCACATGCA 59.246 33.333 6.64 0.00 45.30 3.96
421 1233 6.978080 ACTCTTTGTTCACGCACAATTATTTT 59.022 30.769 0.00 0.00 36.54 1.82
423 1235 8.858003 TCTTTGTTCACGCACAATTATTTTTA 57.142 26.923 0.00 0.00 36.54 1.52
548 1360 1.695893 CCATTGTCGGTGCAGCTACG 61.696 60.000 14.92 4.00 0.00 3.51
609 1985 3.003068 CAGTGTCTCAGTTTTCAAGCCAG 59.997 47.826 0.00 0.00 0.00 4.85
643 2019 5.826737 AGCTCCTGATTTATCCAAGTGAATG 59.173 40.000 0.00 0.00 0.00 2.67
644 2020 5.824624 GCTCCTGATTTATCCAAGTGAATGA 59.175 40.000 0.00 0.00 0.00 2.57
645 2021 6.319658 GCTCCTGATTTATCCAAGTGAATGAA 59.680 38.462 0.00 0.00 0.00 2.57
646 2022 7.014038 GCTCCTGATTTATCCAAGTGAATGAAT 59.986 37.037 0.00 0.00 0.00 2.57
647 2023 9.565090 CTCCTGATTTATCCAAGTGAATGAATA 57.435 33.333 0.00 0.00 0.00 1.75
699 2075 1.525995 CAACCGTCCAAGCACCACT 60.526 57.895 0.00 0.00 0.00 4.00
740 2128 7.639162 GACAATCGGTCGTTCATCTTTATAT 57.361 36.000 0.00 0.00 36.65 0.86
742 2130 9.355215 GACAATCGGTCGTTCATCTTTATATAT 57.645 33.333 0.00 0.00 36.65 0.86
788 2176 2.677836 TGGCGACATTTATCTGTCAAGC 59.322 45.455 0.00 1.37 44.69 4.01
789 2177 2.677836 GGCGACATTTATCTGTCAAGCA 59.322 45.455 5.21 0.00 44.69 3.91
790 2178 3.485877 GGCGACATTTATCTGTCAAGCAC 60.486 47.826 5.21 0.00 44.69 4.40
791 2179 3.125146 GCGACATTTATCTGTCAAGCACA 59.875 43.478 5.21 0.00 44.69 4.57
792 2180 4.378356 GCGACATTTATCTGTCAAGCACAA 60.378 41.667 5.21 0.00 44.69 3.33
981 2369 2.668550 GTCTTCCCACGCCACCAC 60.669 66.667 0.00 0.00 0.00 4.16
982 2370 3.164977 TCTTCCCACGCCACCACA 61.165 61.111 0.00 0.00 0.00 4.17
1013 2401 2.698797 AGACCACCGAACAAGAAGAAGA 59.301 45.455 0.00 0.00 0.00 2.87
1016 2404 3.134081 ACCACCGAACAAGAAGAAGAAGA 59.866 43.478 0.00 0.00 0.00 2.87
1019 2407 5.050490 CACCGAACAAGAAGAAGAAGAAGA 58.950 41.667 0.00 0.00 0.00 2.87
1022 2410 5.986135 CCGAACAAGAAGAAGAAGAAGAAGA 59.014 40.000 0.00 0.00 0.00 2.87
1152 2540 2.190578 GGATGGCCGTCTCCAAGG 59.809 66.667 24.11 0.00 39.96 3.61
1184 2572 3.197790 ATGATGCGCGTGCTGTCC 61.198 61.111 23.16 8.79 43.34 4.02
1270 2658 1.005156 GATGCGATGAGAGGGAGGC 60.005 63.158 0.00 0.00 0.00 4.70
1360 2754 0.811219 TCGTCGTCGTCCGGTATGAT 60.811 55.000 0.00 0.00 38.33 2.45
1361 2755 0.028505 CGTCGTCGTCCGGTATGATT 59.971 55.000 0.00 0.00 37.11 2.57
1364 2758 1.951602 TCGTCGTCCGGTATGATTGAT 59.048 47.619 0.00 0.00 37.11 2.57
1760 3154 1.148273 GATGGAATGGGCGGTGCTA 59.852 57.895 0.00 0.00 0.00 3.49
2459 3853 1.277557 GTGCAGAAGGTGATGGACTCT 59.722 52.381 0.00 0.00 35.17 3.24
2753 4147 4.394078 CGGTCGTTCCTGTCGCGA 62.394 66.667 3.71 3.71 0.00 5.87
2891 4288 1.153628 CGTCAAGTGATCGGGGGAC 60.154 63.158 0.00 0.00 0.00 4.46
2904 4301 3.462678 GGGACCGGAGCAGAGGAC 61.463 72.222 9.46 0.00 0.00 3.85
2919 4316 0.972883 AGGACCTCTGCTTGTGACTC 59.027 55.000 0.00 0.00 0.00 3.36
2920 4317 0.036858 GGACCTCTGCTTGTGACTCC 60.037 60.000 0.00 0.00 0.00 3.85
3003 4419 4.925054 CACGGATTCATGATTTGTTTTGCT 59.075 37.500 0.00 0.00 0.00 3.91
3015 4431 4.319139 TTGTTTTGCTAAGCATTGCTCA 57.681 36.364 12.39 2.84 38.25 4.26
3022 4438 2.352960 GCTAAGCATTGCTCACCAGTAC 59.647 50.000 12.39 0.00 38.25 2.73
3024 4440 3.981071 AAGCATTGCTCACCAGTACTA 57.019 42.857 12.39 0.00 38.25 1.82
3063 4479 6.465439 TGTCGACACATCTGTAAATAGGAT 57.535 37.500 15.76 0.00 0.00 3.24
3069 4485 8.969267 CGACACATCTGTAAATAGGATAAGAAC 58.031 37.037 0.00 0.00 0.00 3.01
3072 4488 9.186323 CACATCTGTAAATAGGATAAGAACTCG 57.814 37.037 0.00 0.00 0.00 4.18
3093 4511 7.344134 ACTCGGGAGTGTATATATAGTGCATA 58.656 38.462 0.00 0.00 40.75 3.14
3110 4528 7.961326 AGTGCATAGGATTTCCATAAAACTT 57.039 32.000 0.00 0.00 38.89 2.66
3154 4572 2.969443 AACACAATACAGACGCAAGC 57.031 45.000 0.00 0.00 45.62 4.01
3155 4573 0.790207 ACACAATACAGACGCAAGCG 59.210 50.000 13.50 13.50 46.03 4.68
3156 4574 0.519175 CACAATACAGACGCAAGCGC 60.519 55.000 15.09 0.00 44.19 5.92
3157 4575 0.670546 ACAATACAGACGCAAGCGCT 60.671 50.000 15.09 2.64 44.19 5.92
3158 4576 0.025513 CAATACAGACGCAAGCGCTC 59.974 55.000 12.06 11.06 44.19 5.03
3159 4577 0.389817 AATACAGACGCAAGCGCTCA 60.390 50.000 12.06 3.77 44.19 4.26
3160 4578 0.179100 ATACAGACGCAAGCGCTCAT 60.179 50.000 12.06 0.00 44.19 2.90
3161 4579 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
3162 4580 1.078759 ACAGACGCAAGCGCTCATAC 61.079 55.000 12.06 1.58 44.19 2.39
3163 4581 1.078201 CAGACGCAAGCGCTCATACA 61.078 55.000 12.06 0.00 44.19 2.29
3164 4582 0.179100 AGACGCAAGCGCTCATACAT 60.179 50.000 12.06 0.00 44.19 2.29
3165 4583 1.067060 AGACGCAAGCGCTCATACATA 59.933 47.619 12.06 0.00 44.19 2.29
3166 4584 1.190323 GACGCAAGCGCTCATACATAC 59.810 52.381 12.06 0.00 44.19 2.39
3167 4585 0.159554 CGCAAGCGCTCATACATACG 59.840 55.000 12.06 0.00 35.30 3.06
3174 4592 3.954030 CGCTCATACATACGCACATAC 57.046 47.619 0.00 0.00 0.00 2.39
3175 4593 3.305110 CGCTCATACATACGCACATACA 58.695 45.455 0.00 0.00 0.00 2.29
3176 4594 3.119628 CGCTCATACATACGCACATACAC 59.880 47.826 0.00 0.00 0.00 2.90
3177 4595 4.299155 GCTCATACATACGCACATACACT 58.701 43.478 0.00 0.00 0.00 3.55
3178 4596 4.383052 GCTCATACATACGCACATACACTC 59.617 45.833 0.00 0.00 0.00 3.51
3179 4597 4.533222 TCATACATACGCACATACACTCG 58.467 43.478 0.00 0.00 0.00 4.18
3180 4598 1.556564 ACATACGCACATACACTCGC 58.443 50.000 0.00 0.00 0.00 5.03
3181 4599 0.852777 CATACGCACATACACTCGCC 59.147 55.000 0.00 0.00 0.00 5.54
3182 4600 0.249322 ATACGCACATACACTCGCCC 60.249 55.000 0.00 0.00 0.00 6.13
3183 4601 2.287457 TACGCACATACACTCGCCCC 62.287 60.000 0.00 0.00 0.00 5.80
3184 4602 2.584608 GCACATACACTCGCCCCT 59.415 61.111 0.00 0.00 0.00 4.79
3185 4603 1.820581 GCACATACACTCGCCCCTA 59.179 57.895 0.00 0.00 0.00 3.53
3186 4604 0.393077 GCACATACACTCGCCCCTAT 59.607 55.000 0.00 0.00 0.00 2.57
3187 4605 1.873903 GCACATACACTCGCCCCTATG 60.874 57.143 0.00 0.00 0.00 2.23
3188 4606 1.686587 CACATACACTCGCCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
3189 4607 2.102420 CACATACACTCGCCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
3190 4608 2.972713 ACATACACTCGCCCCTATGAAT 59.027 45.455 0.00 0.00 0.00 2.57
3191 4609 3.244215 ACATACACTCGCCCCTATGAATG 60.244 47.826 0.00 0.00 0.00 2.67
3192 4610 0.179045 ACACTCGCCCCTATGAATGC 60.179 55.000 0.00 0.00 0.00 3.56
3193 4611 0.179048 CACTCGCCCCTATGAATGCA 60.179 55.000 0.00 0.00 0.00 3.96
3194 4612 0.179045 ACTCGCCCCTATGAATGCAC 60.179 55.000 0.00 0.00 0.00 4.57
3195 4613 0.179048 CTCGCCCCTATGAATGCACA 60.179 55.000 0.00 0.00 0.00 4.57
3196 4614 0.463654 TCGCCCCTATGAATGCACAC 60.464 55.000 0.00 0.00 0.00 3.82
3197 4615 0.747644 CGCCCCTATGAATGCACACA 60.748 55.000 0.00 0.00 0.00 3.72
3198 4616 1.696063 GCCCCTATGAATGCACACAT 58.304 50.000 11.30 11.30 38.49 3.21
3199 4617 2.810032 CGCCCCTATGAATGCACACATA 60.810 50.000 12.15 12.15 34.62 2.29
3200 4618 2.554032 GCCCCTATGAATGCACACATAC 59.446 50.000 9.63 0.00 34.62 2.39
3201 4619 2.807967 CCCCTATGAATGCACACATACG 59.192 50.000 9.63 7.07 34.62 3.06
3202 4620 2.807967 CCCTATGAATGCACACATACGG 59.192 50.000 9.63 10.99 34.62 4.02
3203 4621 2.224079 CCTATGAATGCACACATACGGC 59.776 50.000 9.63 0.00 34.62 5.68
3204 4622 1.748950 ATGAATGCACACATACGGCA 58.251 45.000 5.78 0.00 42.43 5.69
3206 4624 2.911484 TGAATGCACACATACGGCATA 58.089 42.857 0.00 0.00 46.77 3.14
3207 4625 3.475575 TGAATGCACACATACGGCATAT 58.524 40.909 0.00 0.00 46.77 1.78
3208 4626 3.498018 TGAATGCACACATACGGCATATC 59.502 43.478 0.00 0.00 46.77 1.63
3209 4627 2.611225 TGCACACATACGGCATATCA 57.389 45.000 0.00 0.00 31.58 2.15
3210 4628 3.124578 TGCACACATACGGCATATCAT 57.875 42.857 0.00 0.00 31.58 2.45
3211 4629 3.066380 TGCACACATACGGCATATCATC 58.934 45.455 0.00 0.00 31.58 2.92
3212 4630 3.244181 TGCACACATACGGCATATCATCT 60.244 43.478 0.00 0.00 31.58 2.90
3213 4631 3.748048 GCACACATACGGCATATCATCTT 59.252 43.478 0.00 0.00 0.00 2.40
3214 4632 4.377738 GCACACATACGGCATATCATCTTG 60.378 45.833 0.00 0.00 0.00 3.02
3215 4633 4.990426 CACACATACGGCATATCATCTTGA 59.010 41.667 0.00 0.00 0.00 3.02
3216 4634 5.119743 CACACATACGGCATATCATCTTGAG 59.880 44.000 0.00 0.00 0.00 3.02
3217 4635 5.011023 ACACATACGGCATATCATCTTGAGA 59.989 40.000 0.00 0.00 0.00 3.27
3218 4636 6.104665 CACATACGGCATATCATCTTGAGAT 58.895 40.000 0.00 0.00 34.56 2.75
3219 4637 6.592994 CACATACGGCATATCATCTTGAGATT 59.407 38.462 0.00 0.00 31.21 2.40
3220 4638 7.118825 CACATACGGCATATCATCTTGAGATTT 59.881 37.037 0.00 0.00 31.21 2.17
3221 4639 8.314021 ACATACGGCATATCATCTTGAGATTTA 58.686 33.333 0.00 0.00 31.21 1.40
3222 4640 8.598924 CATACGGCATATCATCTTGAGATTTAC 58.401 37.037 0.00 0.00 31.21 2.01
3223 4641 5.635280 ACGGCATATCATCTTGAGATTTACG 59.365 40.000 0.00 0.00 31.21 3.18
3224 4642 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
3225 4643 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
3226 4644 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
3227 4645 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
3228 4646 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
3229 4647 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
3231 4649 8.954950 ATCATCTTGAGATTTACGAAGTCATT 57.045 30.769 0.00 0.00 35.39 2.57
3232 4650 8.189709 TCATCTTGAGATTTACGAAGTCATTG 57.810 34.615 0.00 0.00 35.39 2.82
3233 4651 7.819415 TCATCTTGAGATTTACGAAGTCATTGT 59.181 33.333 0.00 0.00 35.39 2.71
3234 4652 9.087424 CATCTTGAGATTTACGAAGTCATTGTA 57.913 33.333 0.00 0.00 35.39 2.41
3235 4653 8.689251 TCTTGAGATTTACGAAGTCATTGTAG 57.311 34.615 0.00 0.00 43.93 2.74
3236 4654 7.759886 TCTTGAGATTTACGAAGTCATTGTAGG 59.240 37.037 0.00 0.00 43.93 3.18
3237 4655 5.810587 TGAGATTTACGAAGTCATTGTAGGC 59.189 40.000 0.00 0.00 43.93 3.93
3238 4656 5.730550 AGATTTACGAAGTCATTGTAGGCA 58.269 37.500 0.00 0.00 43.93 4.75
3239 4657 5.581085 AGATTTACGAAGTCATTGTAGGCAC 59.419 40.000 0.00 0.00 43.93 5.01
3240 4658 4.530710 TTACGAAGTCATTGTAGGCACT 57.469 40.909 0.00 0.00 43.93 4.40
3241 4659 3.402628 ACGAAGTCATTGTAGGCACTT 57.597 42.857 0.00 0.00 29.74 3.16
3242 4660 3.326747 ACGAAGTCATTGTAGGCACTTC 58.673 45.455 0.00 5.52 29.74 3.01
3243 4661 3.999229 GAAGTCATTGTAGGCACTTCG 57.001 47.619 0.00 0.00 41.75 3.79
3244 4662 3.326747 GAAGTCATTGTAGGCACTTCGT 58.673 45.455 0.00 0.00 41.75 3.85
3245 4663 2.960819 AGTCATTGTAGGCACTTCGTC 58.039 47.619 0.00 0.00 41.75 4.20
3246 4664 2.299013 AGTCATTGTAGGCACTTCGTCA 59.701 45.455 0.00 0.00 41.75 4.35
3247 4665 3.055819 AGTCATTGTAGGCACTTCGTCAT 60.056 43.478 0.00 0.00 41.75 3.06
3248 4666 3.307242 GTCATTGTAGGCACTTCGTCATC 59.693 47.826 0.00 0.00 41.75 2.92
3249 4667 1.990799 TTGTAGGCACTTCGTCATCG 58.009 50.000 0.00 0.00 41.75 3.84
3250 4668 1.170442 TGTAGGCACTTCGTCATCGA 58.830 50.000 0.00 0.00 44.66 3.59
3251 4669 1.135489 TGTAGGCACTTCGTCATCGAC 60.135 52.381 0.00 0.00 46.03 4.20
3270 4688 3.154589 GGAAACGTCTCATCCCACC 57.845 57.895 0.00 0.00 0.00 4.61
3271 4689 0.739813 GGAAACGTCTCATCCCACCG 60.740 60.000 0.00 0.00 0.00 4.94
3272 4690 0.245539 GAAACGTCTCATCCCACCGA 59.754 55.000 0.00 0.00 0.00 4.69
3273 4691 0.682852 AAACGTCTCATCCCACCGAA 59.317 50.000 0.00 0.00 0.00 4.30
3274 4692 0.682852 AACGTCTCATCCCACCGAAA 59.317 50.000 0.00 0.00 0.00 3.46
3275 4693 0.246635 ACGTCTCATCCCACCGAAAG 59.753 55.000 0.00 0.00 0.00 2.62
3276 4694 1.084370 CGTCTCATCCCACCGAAAGC 61.084 60.000 0.00 0.00 0.00 3.51
3277 4695 1.084370 GTCTCATCCCACCGAAAGCG 61.084 60.000 0.00 0.00 37.24 4.68
3278 4696 1.079127 CTCATCCCACCGAAAGCGT 60.079 57.895 0.00 0.00 35.23 5.07
3279 4697 0.174845 CTCATCCCACCGAAAGCGTA 59.825 55.000 0.00 0.00 35.23 4.42
3280 4698 0.828022 TCATCCCACCGAAAGCGTAT 59.172 50.000 0.00 0.00 35.23 3.06
3281 4699 1.202486 TCATCCCACCGAAAGCGTATC 60.202 52.381 0.00 0.00 35.23 2.24
3282 4700 0.249322 ATCCCACCGAAAGCGTATCG 60.249 55.000 2.44 2.44 39.92 2.92
3295 4713 1.847818 CGTATCGCCGAAAATCCTGA 58.152 50.000 0.00 0.00 0.00 3.86
3296 4714 2.198406 CGTATCGCCGAAAATCCTGAA 58.802 47.619 0.00 0.00 0.00 3.02
3297 4715 2.605818 CGTATCGCCGAAAATCCTGAAA 59.394 45.455 0.00 0.00 0.00 2.69
3298 4716 3.247648 CGTATCGCCGAAAATCCTGAAAT 59.752 43.478 0.00 0.00 0.00 2.17
3299 4717 4.446385 CGTATCGCCGAAAATCCTGAAATA 59.554 41.667 0.00 0.00 0.00 1.40
3300 4718 5.050634 CGTATCGCCGAAAATCCTGAAATAA 60.051 40.000 0.00 0.00 0.00 1.40
3301 4719 5.828299 ATCGCCGAAAATCCTGAAATAAA 57.172 34.783 0.00 0.00 0.00 1.40
3302 4720 5.828299 TCGCCGAAAATCCTGAAATAAAT 57.172 34.783 0.00 0.00 0.00 1.40
3303 4721 5.816919 TCGCCGAAAATCCTGAAATAAATC 58.183 37.500 0.00 0.00 0.00 2.17
3304 4722 5.355630 TCGCCGAAAATCCTGAAATAAATCA 59.644 36.000 0.00 0.00 0.00 2.57
3305 4723 6.033341 CGCCGAAAATCCTGAAATAAATCAA 58.967 36.000 0.00 0.00 0.00 2.57
3306 4724 6.197096 CGCCGAAAATCCTGAAATAAATCAAG 59.803 38.462 0.00 0.00 0.00 3.02
3307 4725 6.476706 GCCGAAAATCCTGAAATAAATCAAGG 59.523 38.462 0.00 0.00 0.00 3.61
3308 4726 7.630513 GCCGAAAATCCTGAAATAAATCAAGGA 60.631 37.037 0.00 0.00 33.87 3.36
3309 4727 8.250332 CCGAAAATCCTGAAATAAATCAAGGAA 58.750 33.333 0.00 0.00 33.42 3.36
3310 4728 9.807649 CGAAAATCCTGAAATAAATCAAGGAAT 57.192 29.630 0.00 0.00 33.42 3.01
3322 4740 6.619801 AAATCAAGGAATAATACGAGCACC 57.380 37.500 0.00 0.00 0.00 5.01
3323 4741 4.746535 TCAAGGAATAATACGAGCACCA 57.253 40.909 0.00 0.00 0.00 4.17
3324 4742 4.439057 TCAAGGAATAATACGAGCACCAC 58.561 43.478 0.00 0.00 0.00 4.16
3325 4743 3.093717 AGGAATAATACGAGCACCACG 57.906 47.619 0.00 0.00 0.00 4.94
3326 4744 2.691526 AGGAATAATACGAGCACCACGA 59.308 45.455 0.00 0.00 34.70 4.35
3327 4745 2.793232 GGAATAATACGAGCACCACGAC 59.207 50.000 0.00 0.00 34.70 4.34
3328 4746 3.490419 GGAATAATACGAGCACCACGACT 60.490 47.826 0.00 0.00 34.70 4.18
3329 4747 3.795623 ATAATACGAGCACCACGACTT 57.204 42.857 0.00 0.00 34.70 3.01
3330 4748 4.906065 ATAATACGAGCACCACGACTTA 57.094 40.909 0.00 0.00 34.70 2.24
3331 4749 3.581024 AATACGAGCACCACGACTTAA 57.419 42.857 0.00 0.00 34.70 1.85
3332 4750 3.581024 ATACGAGCACCACGACTTAAA 57.419 42.857 0.00 0.00 34.70 1.52
3333 4751 1.494824 ACGAGCACCACGACTTAAAC 58.505 50.000 0.00 0.00 34.70 2.01
3334 4752 0.788391 CGAGCACCACGACTTAAACC 59.212 55.000 0.00 0.00 0.00 3.27
3335 4753 1.604693 CGAGCACCACGACTTAAACCT 60.605 52.381 0.00 0.00 0.00 3.50
3336 4754 2.490991 GAGCACCACGACTTAAACCTT 58.509 47.619 0.00 0.00 0.00 3.50
3337 4755 2.218603 AGCACCACGACTTAAACCTTG 58.781 47.619 0.00 0.00 0.00 3.61
3338 4756 2.158871 AGCACCACGACTTAAACCTTGA 60.159 45.455 0.00 0.00 0.00 3.02
3339 4757 2.812011 GCACCACGACTTAAACCTTGAT 59.188 45.455 0.00 0.00 0.00 2.57
3340 4758 3.364964 GCACCACGACTTAAACCTTGATG 60.365 47.826 0.00 0.00 0.00 3.07
3341 4759 3.188460 CACCACGACTTAAACCTTGATGG 59.812 47.826 0.00 0.00 42.93 3.51
3342 4760 2.161609 CCACGACTTAAACCTTGATGGC 59.838 50.000 0.00 0.00 40.22 4.40
3343 4761 3.074412 CACGACTTAAACCTTGATGGCT 58.926 45.455 0.00 0.00 40.22 4.75
3344 4762 3.074412 ACGACTTAAACCTTGATGGCTG 58.926 45.455 0.00 0.00 40.22 4.85
3345 4763 2.420022 CGACTTAAACCTTGATGGCTGG 59.580 50.000 0.00 0.00 40.22 4.85
3346 4764 2.755103 GACTTAAACCTTGATGGCTGGG 59.245 50.000 0.00 0.00 40.22 4.45
3347 4765 2.378547 ACTTAAACCTTGATGGCTGGGA 59.621 45.455 0.00 0.00 40.22 4.37
3348 4766 3.181423 ACTTAAACCTTGATGGCTGGGAA 60.181 43.478 0.00 0.00 40.22 3.97
3349 4767 2.629017 AAACCTTGATGGCTGGGAAT 57.371 45.000 0.00 0.00 40.22 3.01
3350 4768 3.756082 AAACCTTGATGGCTGGGAATA 57.244 42.857 0.00 0.00 40.22 1.75
3351 4769 2.736670 ACCTTGATGGCTGGGAATAC 57.263 50.000 0.00 0.00 40.22 1.89
3352 4770 1.215423 ACCTTGATGGCTGGGAATACC 59.785 52.381 0.00 0.00 40.22 2.73
3353 4771 3.439344 ACCTTGATGGCTGGGAATACCA 61.439 50.000 0.00 0.00 43.62 3.25
3354 4772 2.301346 CTTGATGGCTGGGAATACCAC 58.699 52.381 0.00 0.00 46.80 4.16
3355 4773 1.595311 TGATGGCTGGGAATACCACT 58.405 50.000 0.00 0.00 46.80 4.00
3356 4774 1.212688 TGATGGCTGGGAATACCACTG 59.787 52.381 0.00 0.00 46.80 3.66
3357 4775 1.212935 GATGGCTGGGAATACCACTGT 59.787 52.381 0.00 0.00 46.80 3.55
3358 4776 0.618458 TGGCTGGGAATACCACTGTC 59.382 55.000 0.00 0.00 46.80 3.51
3359 4777 0.107165 GGCTGGGAATACCACTGTCC 60.107 60.000 0.00 0.00 46.80 4.02
3363 4781 1.880941 GGGAATACCACTGTCCCTCT 58.119 55.000 0.51 0.00 46.57 3.69
3364 4782 3.042059 GGGAATACCACTGTCCCTCTA 57.958 52.381 0.51 0.00 46.57 2.43
3365 4783 3.381335 GGGAATACCACTGTCCCTCTAA 58.619 50.000 0.51 0.00 46.57 2.10
3366 4784 3.134262 GGGAATACCACTGTCCCTCTAAC 59.866 52.174 0.51 0.00 46.57 2.34
3367 4785 3.134262 GGAATACCACTGTCCCTCTAACC 59.866 52.174 0.00 0.00 35.97 2.85
3368 4786 3.484953 ATACCACTGTCCCTCTAACCA 57.515 47.619 0.00 0.00 0.00 3.67
3369 4787 2.344093 ACCACTGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
3370 4788 2.188817 ACCACTGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
3371 4789 2.225650 ACCACTGTCCCTCTAACCATCT 60.226 50.000 0.00 0.00 0.00 2.90
3372 4790 2.432510 CCACTGTCCCTCTAACCATCTC 59.567 54.545 0.00 0.00 0.00 2.75
3373 4791 3.099905 CACTGTCCCTCTAACCATCTCA 58.900 50.000 0.00 0.00 0.00 3.27
3374 4792 3.515502 CACTGTCCCTCTAACCATCTCAA 59.484 47.826 0.00 0.00 0.00 3.02
3375 4793 3.515901 ACTGTCCCTCTAACCATCTCAAC 59.484 47.826 0.00 0.00 0.00 3.18
3376 4794 2.838202 TGTCCCTCTAACCATCTCAACC 59.162 50.000 0.00 0.00 0.00 3.77
3377 4795 2.838202 GTCCCTCTAACCATCTCAACCA 59.162 50.000 0.00 0.00 0.00 3.67
3378 4796 2.838202 TCCCTCTAACCATCTCAACCAC 59.162 50.000 0.00 0.00 0.00 4.16
3379 4797 2.571653 CCCTCTAACCATCTCAACCACA 59.428 50.000 0.00 0.00 0.00 4.17
3380 4798 3.369892 CCCTCTAACCATCTCAACCACAG 60.370 52.174 0.00 0.00 0.00 3.66
3381 4799 3.369892 CCTCTAACCATCTCAACCACAGG 60.370 52.174 0.00 0.00 0.00 4.00
3382 4800 3.248024 TCTAACCATCTCAACCACAGGT 58.752 45.455 0.00 0.00 37.65 4.00
3392 4810 3.030652 CCACAGGTTGGTTCGCAC 58.969 61.111 0.00 0.00 41.10 5.34
3393 4811 1.821759 CCACAGGTTGGTTCGCACA 60.822 57.895 0.00 0.00 41.10 4.57
3394 4812 1.172180 CCACAGGTTGGTTCGCACAT 61.172 55.000 0.00 0.00 41.10 3.21
3395 4813 0.238289 CACAGGTTGGTTCGCACATC 59.762 55.000 0.00 0.00 0.00 3.06
3396 4814 0.179032 ACAGGTTGGTTCGCACATCA 60.179 50.000 0.00 0.00 0.00 3.07
3397 4815 0.518636 CAGGTTGGTTCGCACATCAG 59.481 55.000 0.00 0.00 0.00 2.90
3398 4816 0.396435 AGGTTGGTTCGCACATCAGA 59.604 50.000 0.00 0.00 0.00 3.27
3399 4817 1.003580 AGGTTGGTTCGCACATCAGAT 59.996 47.619 0.00 0.00 0.00 2.90
3400 4818 1.812571 GGTTGGTTCGCACATCAGATT 59.187 47.619 0.00 0.00 0.00 2.40
3401 4819 2.228822 GGTTGGTTCGCACATCAGATTT 59.771 45.455 0.00 0.00 0.00 2.17
3402 4820 3.305335 GGTTGGTTCGCACATCAGATTTT 60.305 43.478 0.00 0.00 0.00 1.82
3403 4821 4.298332 GTTGGTTCGCACATCAGATTTTT 58.702 39.130 0.00 0.00 0.00 1.94
3404 4822 5.457140 GTTGGTTCGCACATCAGATTTTTA 58.543 37.500 0.00 0.00 0.00 1.52
3405 4823 5.697473 TGGTTCGCACATCAGATTTTTAA 57.303 34.783 0.00 0.00 0.00 1.52
3406 4824 6.078202 TGGTTCGCACATCAGATTTTTAAA 57.922 33.333 0.00 0.00 0.00 1.52
3407 4825 6.148948 TGGTTCGCACATCAGATTTTTAAAG 58.851 36.000 0.00 0.00 0.00 1.85
3408 4826 5.572896 GGTTCGCACATCAGATTTTTAAAGG 59.427 40.000 0.00 0.00 0.00 3.11
3409 4827 5.309323 TCGCACATCAGATTTTTAAAGGG 57.691 39.130 0.00 0.00 0.00 3.95
3410 4828 3.859386 CGCACATCAGATTTTTAAAGGGC 59.141 43.478 0.00 0.00 0.00 5.19
3411 4829 4.183865 GCACATCAGATTTTTAAAGGGCC 58.816 43.478 0.00 0.00 0.00 5.80
3412 4830 4.322650 GCACATCAGATTTTTAAAGGGCCA 60.323 41.667 6.18 0.00 0.00 5.36
3413 4831 5.413499 CACATCAGATTTTTAAAGGGCCAG 58.587 41.667 6.18 0.00 0.00 4.85
3414 4832 4.467438 ACATCAGATTTTTAAAGGGCCAGG 59.533 41.667 6.18 0.00 0.00 4.45
3415 4833 3.440127 TCAGATTTTTAAAGGGCCAGGG 58.560 45.455 6.18 0.00 0.00 4.45
3416 4834 2.093500 CAGATTTTTAAAGGGCCAGGGC 60.093 50.000 6.18 3.77 41.06 5.19
3426 4844 2.266689 GCCAGGGCCAATGCTTTG 59.733 61.111 6.18 5.37 37.74 2.77
3435 4853 2.900122 CCAATGCTTTGGTAGTCGTG 57.100 50.000 20.54 0.00 46.27 4.35
3436 4854 1.135689 CCAATGCTTTGGTAGTCGTGC 60.136 52.381 20.54 0.00 46.27 5.34
3437 4855 1.135689 CAATGCTTTGGTAGTCGTGCC 60.136 52.381 4.44 0.00 0.00 5.01
3438 4856 0.036164 ATGCTTTGGTAGTCGTGCCA 59.964 50.000 0.00 0.00 36.50 4.92
3439 4857 0.036164 TGCTTTGGTAGTCGTGCCAT 59.964 50.000 0.00 0.00 38.40 4.40
3440 4858 0.447801 GCTTTGGTAGTCGTGCCATG 59.552 55.000 0.00 0.00 38.40 3.66
3441 4859 1.943968 GCTTTGGTAGTCGTGCCATGA 60.944 52.381 0.00 0.00 38.40 3.07
3442 4860 2.632377 CTTTGGTAGTCGTGCCATGAT 58.368 47.619 0.00 0.00 38.40 2.45
3443 4861 2.022764 TTGGTAGTCGTGCCATGATG 57.977 50.000 0.00 0.00 38.40 3.07
3444 4862 1.190643 TGGTAGTCGTGCCATGATGA 58.809 50.000 0.00 0.00 32.64 2.92
3445 4863 1.136891 TGGTAGTCGTGCCATGATGAG 59.863 52.381 0.00 0.00 32.64 2.90
3446 4864 1.212616 GTAGTCGTGCCATGATGAGC 58.787 55.000 0.00 0.00 0.00 4.26
3447 4865 0.823460 TAGTCGTGCCATGATGAGCA 59.177 50.000 4.79 4.79 36.44 4.26
3451 4869 2.988800 TGCCATGATGAGCACGGA 59.011 55.556 4.79 0.00 29.14 4.69
3452 4870 1.528339 TGCCATGATGAGCACGGAT 59.472 52.632 4.79 0.00 29.14 4.18
3453 4871 0.107066 TGCCATGATGAGCACGGATT 60.107 50.000 4.79 0.00 29.14 3.01
3454 4872 0.309922 GCCATGATGAGCACGGATTG 59.690 55.000 0.00 0.00 29.14 2.67
3455 4873 1.671979 CCATGATGAGCACGGATTGT 58.328 50.000 0.00 0.00 29.14 2.71
3456 4874 2.837498 CCATGATGAGCACGGATTGTA 58.163 47.619 0.00 0.00 29.14 2.41
3457 4875 3.205338 CCATGATGAGCACGGATTGTAA 58.795 45.455 0.00 0.00 29.14 2.41
3458 4876 3.627123 CCATGATGAGCACGGATTGTAAA 59.373 43.478 0.00 0.00 29.14 2.01
3459 4877 4.260907 CCATGATGAGCACGGATTGTAAAG 60.261 45.833 0.00 0.00 29.14 1.85
3460 4878 2.677836 TGATGAGCACGGATTGTAAAGC 59.322 45.455 0.00 0.00 0.00 3.51
3461 4879 2.177394 TGAGCACGGATTGTAAAGCA 57.823 45.000 0.00 0.00 30.69 3.91
3462 4880 2.499197 TGAGCACGGATTGTAAAGCAA 58.501 42.857 0.00 0.00 41.89 3.91
3463 4881 2.483877 TGAGCACGGATTGTAAAGCAAG 59.516 45.455 0.00 0.00 40.86 4.01
3464 4882 1.812571 AGCACGGATTGTAAAGCAAGG 59.187 47.619 0.00 0.00 40.86 3.61
3465 4883 1.732405 GCACGGATTGTAAAGCAAGGC 60.732 52.381 0.00 0.00 40.86 4.35
3466 4884 1.812571 CACGGATTGTAAAGCAAGGCT 59.187 47.619 0.00 0.00 42.56 4.58
3467 4885 3.006940 CACGGATTGTAAAGCAAGGCTA 58.993 45.455 0.00 0.00 38.25 3.93
3468 4886 3.063997 CACGGATTGTAAAGCAAGGCTAG 59.936 47.826 0.00 0.00 38.25 3.42
3469 4887 3.270877 CGGATTGTAAAGCAAGGCTAGT 58.729 45.455 0.00 0.00 38.25 2.57
3470 4888 3.063997 CGGATTGTAAAGCAAGGCTAGTG 59.936 47.826 0.00 0.00 38.25 2.74
3471 4889 3.378427 GGATTGTAAAGCAAGGCTAGTGG 59.622 47.826 0.00 0.00 38.25 4.00
3472 4890 1.821216 TGTAAAGCAAGGCTAGTGGC 58.179 50.000 0.00 0.00 38.25 5.01
3481 4899 3.562635 GCTAGTGGCCACGTCAAC 58.437 61.111 29.68 15.03 36.20 3.18
3482 4900 2.380410 GCTAGTGGCCACGTCAACG 61.380 63.158 29.68 15.74 39.18 4.10
3483 4901 2.356553 TAGTGGCCACGTCAACGC 60.357 61.111 29.68 3.65 44.43 4.84
3484 4902 2.765250 CTAGTGGCCACGTCAACGCT 62.765 60.000 29.68 12.61 44.43 5.07
3485 4903 2.372040 TAGTGGCCACGTCAACGCTT 62.372 55.000 29.68 11.86 44.43 4.68
3486 4904 2.515057 TGGCCACGTCAACGCTTT 60.515 55.556 0.00 0.00 44.43 3.51
3487 4905 2.051345 GGCCACGTCAACGCTTTG 60.051 61.111 0.00 0.00 44.43 2.77
3488 4906 2.539338 GGCCACGTCAACGCTTTGA 61.539 57.895 0.75 0.75 44.43 2.69
3489 4907 1.353804 GCCACGTCAACGCTTTGAA 59.646 52.632 7.27 0.00 43.52 2.69
3490 4908 0.040425 GCCACGTCAACGCTTTGAAT 60.040 50.000 7.27 0.00 43.52 2.57
3491 4909 1.950472 CCACGTCAACGCTTTGAATC 58.050 50.000 7.27 0.00 43.52 2.52
3492 4910 1.531149 CCACGTCAACGCTTTGAATCT 59.469 47.619 7.27 0.00 43.52 2.40
3493 4911 2.734606 CCACGTCAACGCTTTGAATCTA 59.265 45.455 7.27 0.00 43.52 1.98
3494 4912 3.370978 CCACGTCAACGCTTTGAATCTAT 59.629 43.478 7.27 0.00 43.52 1.98
3495 4913 4.142902 CCACGTCAACGCTTTGAATCTATT 60.143 41.667 7.27 0.00 43.52 1.73
3496 4914 5.015733 CACGTCAACGCTTTGAATCTATTC 58.984 41.667 7.27 0.00 43.52 1.75
3497 4915 4.201589 ACGTCAACGCTTTGAATCTATTCG 60.202 41.667 7.27 7.63 43.52 3.34
3498 4916 4.578601 GTCAACGCTTTGAATCTATTCGG 58.421 43.478 7.27 0.00 43.52 4.30
3499 4917 3.621268 TCAACGCTTTGAATCTATTCGGG 59.379 43.478 2.67 0.00 38.87 5.14
3500 4918 1.940613 ACGCTTTGAATCTATTCGGGC 59.059 47.619 0.00 2.44 39.62 6.13
3501 4919 1.070577 CGCTTTGAATCTATTCGGGCG 60.071 52.381 16.13 16.13 41.21 6.13
3502 4920 1.334149 GCTTTGAATCTATTCGGGCGC 60.334 52.381 0.00 0.00 39.62 6.53
3503 4921 2.213499 CTTTGAATCTATTCGGGCGCT 58.787 47.619 7.64 0.00 39.62 5.92
3504 4922 3.390135 CTTTGAATCTATTCGGGCGCTA 58.610 45.455 7.64 0.00 39.62 4.26
3505 4923 3.678056 TTGAATCTATTCGGGCGCTAT 57.322 42.857 7.64 0.00 39.62 2.97
3506 4924 2.959516 TGAATCTATTCGGGCGCTATG 58.040 47.619 7.64 0.00 39.62 2.23
3507 4925 1.661112 GAATCTATTCGGGCGCTATGC 59.339 52.381 7.64 0.00 45.38 3.14
3508 4926 5.424875 TGAATCTATTCGGGCGCTATGCA 62.425 47.826 7.64 0.00 41.90 3.96
3509 4927 6.831602 TGAATCTATTCGGGCGCTATGCAA 62.832 45.833 7.64 0.00 41.90 4.08
3522 4940 4.790140 GCGCTATGCAAATAGTATGAATGC 59.210 41.667 0.00 8.24 45.45 3.56
3543 4961 3.766432 TTTTTAGCCACCGCCCAC 58.234 55.556 0.00 0.00 34.57 4.61
3544 4962 1.151908 TTTTTAGCCACCGCCCACT 59.848 52.632 0.00 0.00 34.57 4.00
3545 4963 0.891904 TTTTTAGCCACCGCCCACTC 60.892 55.000 0.00 0.00 34.57 3.51
3546 4964 2.058125 TTTTAGCCACCGCCCACTCA 62.058 55.000 0.00 0.00 34.57 3.41
3547 4965 2.741486 TTTAGCCACCGCCCACTCAC 62.741 60.000 0.00 0.00 34.57 3.51
3550 4968 4.742201 CCACCGCCCACTCACTCG 62.742 72.222 0.00 0.00 0.00 4.18
3551 4969 4.742201 CACCGCCCACTCACTCGG 62.742 72.222 0.00 0.00 46.61 4.63
3552 4970 4.988716 ACCGCCCACTCACTCGGA 62.989 66.667 6.52 0.00 44.23 4.55
3560 4978 3.827898 CTCACTCGGAGCCGGACC 61.828 72.222 5.05 6.87 36.69 4.46
3563 4981 3.736224 ACTCGGAGCCGGACCCTA 61.736 66.667 5.05 0.00 40.25 3.53
3564 4982 2.203509 CTCGGAGCCGGACCCTAT 60.204 66.667 5.05 0.00 40.25 2.57
3565 4983 1.074423 CTCGGAGCCGGACCCTATA 59.926 63.158 5.05 0.00 40.25 1.31
3566 4984 0.538977 CTCGGAGCCGGACCCTATAA 60.539 60.000 5.05 0.00 40.25 0.98
3567 4985 0.825010 TCGGAGCCGGACCCTATAAC 60.825 60.000 5.05 0.00 40.25 1.89
3576 4994 3.494398 CCGGACCCTATAACATTGTGGAG 60.494 52.174 0.00 0.00 0.00 3.86
3593 5011 1.137872 GGAGAGATGTCACGGCTTGAT 59.862 52.381 0.00 0.00 36.32 2.57
3604 5022 1.202698 ACGGCTTGATATCCCTTCAGC 60.203 52.381 0.00 0.42 0.00 4.26
3608 5026 3.701040 GGCTTGATATCCCTTCAGCAAAA 59.299 43.478 0.00 0.00 0.00 2.44
3609 5027 4.440663 GGCTTGATATCCCTTCAGCAAAAC 60.441 45.833 0.00 0.00 0.00 2.43
3611 5029 5.336690 GCTTGATATCCCTTCAGCAAAACAA 60.337 40.000 0.00 0.00 0.00 2.83
3615 5033 2.096248 TCCCTTCAGCAAAACAAACGT 58.904 42.857 0.00 0.00 0.00 3.99
3617 5035 3.056465 TCCCTTCAGCAAAACAAACGTTT 60.056 39.130 7.96 7.96 38.24 3.60
3629 5047 7.824100 AAAACAAACGTTTTGTGCTAAAAAC 57.176 28.000 11.66 14.07 43.31 2.43
3635 5053 6.384178 ACGTTTTGTGCTAAAAACAAACTC 57.616 33.333 20.23 8.56 45.98 3.01
3636 5054 5.059955 ACGTTTTGTGCTAAAAACAAACTCG 59.940 36.000 20.23 17.56 45.98 4.18
3648 5066 1.263217 ACAAACTCGCGTGTCCAAATC 59.737 47.619 14.89 0.00 0.00 2.17
3649 5067 1.262950 CAAACTCGCGTGTCCAAATCA 59.737 47.619 14.89 0.00 0.00 2.57
3651 5069 1.588674 ACTCGCGTGTCCAAATCAAA 58.411 45.000 8.21 0.00 0.00 2.69
3692 5111 2.890766 TTGTTCCCAGCCGGACTCC 61.891 63.158 5.05 0.00 41.83 3.85
3703 5122 2.978824 GGACTCCGCCACTGCTAA 59.021 61.111 0.00 0.00 34.43 3.09
3705 5124 1.592223 GACTCCGCCACTGCTAACT 59.408 57.895 0.00 0.00 34.43 2.24
3707 5126 0.900647 ACTCCGCCACTGCTAACTCT 60.901 55.000 0.00 0.00 34.43 3.24
3708 5127 1.103803 CTCCGCCACTGCTAACTCTA 58.896 55.000 0.00 0.00 34.43 2.43
3709 5128 0.815734 TCCGCCACTGCTAACTCTAC 59.184 55.000 0.00 0.00 34.43 2.59
3710 5129 0.530744 CCGCCACTGCTAACTCTACA 59.469 55.000 0.00 0.00 34.43 2.74
3711 5130 1.067142 CCGCCACTGCTAACTCTACAA 60.067 52.381 0.00 0.00 34.43 2.41
3716 5135 3.368531 CCACTGCTAACTCTACAACCCTC 60.369 52.174 0.00 0.00 0.00 4.30
3740 5159 4.916293 GCTGCCATGATCCGCCGA 62.916 66.667 0.00 0.00 0.00 5.54
3745 5164 2.796193 CCATGATCCGCCGACCTCA 61.796 63.158 0.00 0.00 0.00 3.86
3777 5196 1.362717 CCGCGATTGGACGACCTAT 59.637 57.895 8.23 2.65 37.04 2.57
3778 5197 0.939577 CCGCGATTGGACGACCTATG 60.940 60.000 8.23 0.58 37.04 2.23
3782 5201 1.681793 CGATTGGACGACCTATGACCT 59.318 52.381 5.55 0.00 37.04 3.85
3784 5203 1.100510 TTGGACGACCTATGACCTCG 58.899 55.000 5.33 0.00 37.04 4.63
3785 5204 1.359475 GGACGACCTATGACCTCGC 59.641 63.158 0.00 0.00 0.00 5.03
3786 5205 1.381928 GGACGACCTATGACCTCGCA 61.382 60.000 0.00 0.00 0.00 5.10
3787 5206 0.248539 GACGACCTATGACCTCGCAC 60.249 60.000 0.00 0.00 0.00 5.34
3788 5207 0.963856 ACGACCTATGACCTCGCACA 60.964 55.000 0.00 0.00 0.00 4.57
3794 5213 0.170339 TATGACCTCGCACACAGTCG 59.830 55.000 0.00 0.00 31.75 4.18
3795 5214 1.806461 ATGACCTCGCACACAGTCGT 61.806 55.000 0.00 0.00 31.75 4.34
3796 5215 1.299926 GACCTCGCACACAGTCGTT 60.300 57.895 0.00 0.00 0.00 3.85
3798 5217 1.591594 CCTCGCACACAGTCGTTGT 60.592 57.895 0.00 0.00 41.94 3.32
3799 5218 1.151777 CCTCGCACACAGTCGTTGTT 61.152 55.000 0.00 0.00 38.16 2.83
3801 5220 1.011242 CGCACACAGTCGTTGTTGG 60.011 57.895 0.00 0.00 38.16 3.77
3802 5221 1.701545 CGCACACAGTCGTTGTTGGT 61.702 55.000 0.00 0.00 38.16 3.67
3803 5222 0.450184 GCACACAGTCGTTGTTGGTT 59.550 50.000 0.00 0.00 38.16 3.67
3804 5223 1.531058 GCACACAGTCGTTGTTGGTTC 60.531 52.381 0.00 0.00 38.16 3.62
3805 5224 1.003851 ACACAGTCGTTGTTGGTTCG 58.996 50.000 0.00 0.00 38.16 3.95
3806 5225 0.315869 CACAGTCGTTGTTGGTTCGC 60.316 55.000 0.00 0.00 38.16 4.70
3807 5226 1.278637 CAGTCGTTGTTGGTTCGCC 59.721 57.895 0.00 0.00 37.92 5.54
3808 5227 2.241880 AGTCGTTGTTGGTTCGCCG 61.242 57.895 0.00 0.00 41.18 6.46
3809 5228 3.641986 TCGTTGTTGGTTCGCCGC 61.642 61.111 0.00 0.00 41.18 6.53
3810 5229 4.676586 CGTTGTTGGTTCGCCGCC 62.677 66.667 0.00 0.00 41.18 6.13
3811 5230 3.587933 GTTGTTGGTTCGCCGCCA 61.588 61.111 0.00 0.00 41.18 5.69
3812 5231 2.596046 TTGTTGGTTCGCCGCCAT 60.596 55.556 0.00 0.00 41.18 4.40
3813 5232 2.913765 TTGTTGGTTCGCCGCCATG 61.914 57.895 0.00 0.00 41.18 3.66
3814 5233 4.114997 GTTGGTTCGCCGCCATGG 62.115 66.667 7.63 7.63 41.18 3.66
3815 5234 4.652131 TTGGTTCGCCGCCATGGT 62.652 61.111 14.67 0.00 41.21 3.55
3819 5238 4.108299 TTCGCCGCCATGGTCCAT 62.108 61.111 14.67 0.00 41.21 3.41
3841 5260 4.514577 CTCGCGCCCCTTCGATGT 62.515 66.667 0.00 0.00 33.98 3.06
3851 5270 0.527600 CCTTCGATGTCGCCGATTCA 60.528 55.000 0.00 0.00 39.60 2.57
3854 5273 2.785713 TCGATGTCGCCGATTCATTA 57.214 45.000 0.00 0.00 39.60 1.90
3860 5279 1.865340 GTCGCCGATTCATTAACCTCC 59.135 52.381 0.00 0.00 0.00 4.30
3861 5280 1.202604 TCGCCGATTCATTAACCTCCC 60.203 52.381 0.00 0.00 0.00 4.30
3863 5282 1.226746 CCGATTCATTAACCTCCCGC 58.773 55.000 0.00 0.00 0.00 6.13
3874 5293 4.647615 CTCCCGCGTATCTGCCCG 62.648 72.222 4.92 0.00 0.00 6.13
3903 5322 1.884075 CGATTCGTGGACCTCACCCA 61.884 60.000 0.00 0.00 43.23 4.51
3911 5330 2.529389 ACCTCACCCACACCTCCC 60.529 66.667 0.00 0.00 0.00 4.30
3912 5331 2.529136 CCTCACCCACACCTCCCA 60.529 66.667 0.00 0.00 0.00 4.37
3914 5333 3.238497 TCACCCACACCTCCCACG 61.238 66.667 0.00 0.00 0.00 4.94
3916 5335 4.892291 ACCCACACCTCCCACGGT 62.892 66.667 0.00 0.00 37.93 4.83
3917 5336 3.566210 CCCACACCTCCCACGGTT 61.566 66.667 0.00 0.00 34.29 4.44
3919 5338 2.357034 CACACCTCCCACGGTTCG 60.357 66.667 0.00 0.00 34.29 3.95
3922 5341 3.677648 ACCTCCCACGGTTCGTCG 61.678 66.667 0.00 0.00 38.32 5.12
3924 5343 4.351938 CTCCCACGGTTCGTCGCA 62.352 66.667 0.00 0.00 38.32 5.10
3925 5344 3.642778 CTCCCACGGTTCGTCGCAT 62.643 63.158 0.00 0.00 38.32 4.73
3926 5345 3.186047 CCCACGGTTCGTCGCATC 61.186 66.667 0.00 0.00 38.32 3.91
3927 5346 2.431771 CCACGGTTCGTCGCATCA 60.432 61.111 0.00 0.00 38.32 3.07
3928 5347 1.809619 CCACGGTTCGTCGCATCAT 60.810 57.895 0.00 0.00 38.32 2.45
3935 5385 0.249868 TTCGTCGCATCATCATCCCC 60.250 55.000 0.00 0.00 0.00 4.81
3938 5388 0.683973 GTCGCATCATCATCCCCTCT 59.316 55.000 0.00 0.00 0.00 3.69
3939 5389 0.683412 TCGCATCATCATCCCCTCTG 59.317 55.000 0.00 0.00 0.00 3.35
3942 5392 1.627329 GCATCATCATCCCCTCTGCTA 59.373 52.381 0.00 0.00 0.00 3.49
3954 5404 2.290577 CCCTCTGCTAAAGCTTCCTTGT 60.291 50.000 0.00 0.00 42.66 3.16
3962 5412 4.142513 GCTAAAGCTTCCTTGTTCCATCAG 60.143 45.833 0.00 0.00 38.21 2.90
3965 5415 1.742268 GCTTCCTTGTTCCATCAGCTC 59.258 52.381 0.00 0.00 0.00 4.09
3966 5416 2.363683 CTTCCTTGTTCCATCAGCTCC 58.636 52.381 0.00 0.00 0.00 4.70
3968 5418 0.745845 CCTTGTTCCATCAGCTCCCG 60.746 60.000 0.00 0.00 0.00 5.14
3996 5446 7.700656 AGGTAAGAACACGTTTCTGAATTTTTG 59.299 33.333 11.88 0.00 0.00 2.44
4047 5497 8.634475 TGCTGAATATGTATGAATAGATACGC 57.366 34.615 0.00 0.00 32.30 4.42
4048 5498 7.706607 TGCTGAATATGTATGAATAGATACGCC 59.293 37.037 0.00 0.00 32.30 5.68
4083 5533 4.636648 TGTTCGGTTTCTTTGTTGCTTCTA 59.363 37.500 0.00 0.00 0.00 2.10
4084 5534 5.205565 GTTCGGTTTCTTTGTTGCTTCTAG 58.794 41.667 0.00 0.00 0.00 2.43
4104 5554 7.984422 TCTAGAAGAAGAATGCATGTGAAAA 57.016 32.000 0.00 0.00 0.00 2.29
4105 5555 8.571461 TCTAGAAGAAGAATGCATGTGAAAAT 57.429 30.769 0.00 0.00 0.00 1.82
4106 5556 9.671279 TCTAGAAGAAGAATGCATGTGAAAATA 57.329 29.630 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 7.536964 TGAAGCATGTGAAATAAATGTTGTACG 59.463 33.333 0.00 0.00 0.00 3.67
112 113 4.570930 TCGTGGCACATACTGTATTTTGA 58.429 39.130 19.09 0.00 44.52 2.69
114 115 3.374058 GCTCGTGGCACATACTGTATTTT 59.626 43.478 19.09 0.00 44.52 1.82
128 129 4.485163 ACAAATTTAAGAATGCTCGTGGC 58.515 39.130 0.00 0.00 42.22 5.01
129 130 7.406799 AAAACAAATTTAAGAATGCTCGTGG 57.593 32.000 0.00 0.00 0.00 4.94
132 133 7.343691 TGCAAAAACAAATTTAAGAATGCTCG 58.656 30.769 14.53 0.00 0.00 5.03
135 561 9.928236 TTACTGCAAAAACAAATTTAAGAATGC 57.072 25.926 9.31 9.31 0.00 3.56
210 1022 0.657840 AATGCTCCGCTCGTTATTGC 59.342 50.000 0.00 0.00 0.00 3.56
214 1026 4.841443 TTAGATAATGCTCCGCTCGTTA 57.159 40.909 0.00 0.00 0.00 3.18
279 1091 3.591196 TTTGGTAATGTGAATGGCTGC 57.409 42.857 0.00 0.00 0.00 5.25
283 1095 8.231692 TGTGGTATATTTGGTAATGTGAATGG 57.768 34.615 0.00 0.00 0.00 3.16
340 1152 4.991153 TTAAATTCGGGTATGCATTGCA 57.009 36.364 14.72 14.72 44.86 4.08
341 1153 5.752955 ACAATTAAATTCGGGTATGCATTGC 59.247 36.000 3.54 0.46 0.00 3.56
342 1154 7.769272 AACAATTAAATTCGGGTATGCATTG 57.231 32.000 3.54 0.00 0.00 2.82
343 1155 8.470805 TGTAACAATTAAATTCGGGTATGCATT 58.529 29.630 3.54 0.00 0.00 3.56
457 1269 9.527157 TGGGAATTTGAAGATTAGTTTCATACA 57.473 29.630 0.00 0.00 34.76 2.29
458 1270 9.788960 GTGGGAATTTGAAGATTAGTTTCATAC 57.211 33.333 0.00 0.00 34.76 2.39
461 1273 7.831691 TGTGGGAATTTGAAGATTAGTTTCA 57.168 32.000 0.00 0.00 33.00 2.69
466 1278 6.582295 CGTTGTTGTGGGAATTTGAAGATTAG 59.418 38.462 0.00 0.00 0.00 1.73
498 1310 8.948631 TTGTCTATGATAACTCAGGTGATTTC 57.051 34.615 0.00 0.00 34.12 2.17
537 1349 1.153549 CTCTTCCCGTAGCTGCACC 60.154 63.158 1.02 0.00 0.00 5.01
572 1384 9.469097 ACTGAGACACTGATTAATTAGACTAGT 57.531 33.333 13.75 0.00 0.00 2.57
609 1985 1.688269 ATCAGGAGCTCCTCTGCAGC 61.688 60.000 33.06 2.96 46.65 5.25
643 2019 5.100259 TCACGGAAAAGTCGTCTGATATTC 58.900 41.667 0.00 0.00 38.94 1.75
644 2020 5.068234 TCACGGAAAAGTCGTCTGATATT 57.932 39.130 0.00 0.00 38.94 1.28
645 2021 4.713824 TCACGGAAAAGTCGTCTGATAT 57.286 40.909 0.00 0.00 38.94 1.63
646 2022 4.232221 GTTCACGGAAAAGTCGTCTGATA 58.768 43.478 0.00 0.00 38.94 2.15
647 2023 3.057734 GTTCACGGAAAAGTCGTCTGAT 58.942 45.455 0.00 0.00 38.94 2.90
648 2024 2.466846 GTTCACGGAAAAGTCGTCTGA 58.533 47.619 0.00 0.00 38.94 3.27
699 2075 6.479990 CCGATTGTCTGCTTCAGTTGAATATA 59.520 38.462 0.00 0.00 33.01 0.86
785 2173 2.884639 GGTTCATACCTGTGTTGTGCTT 59.115 45.455 0.00 0.00 41.53 3.91
788 2176 1.196808 GCGGTTCATACCTGTGTTGTG 59.803 52.381 0.00 0.00 42.66 3.33
789 2177 1.202710 TGCGGTTCATACCTGTGTTGT 60.203 47.619 0.00 0.00 42.66 3.32
790 2178 1.196808 GTGCGGTTCATACCTGTGTTG 59.803 52.381 0.00 0.00 42.66 3.33
791 2179 1.519408 GTGCGGTTCATACCTGTGTT 58.481 50.000 0.00 0.00 42.66 3.32
792 2180 0.321298 GGTGCGGTTCATACCTGTGT 60.321 55.000 0.00 0.00 42.66 3.72
1013 2401 4.344359 AGAAACCTCGCTTCTTCTTCTT 57.656 40.909 0.00 0.00 28.46 2.52
1016 2404 2.550180 GCAAGAAACCTCGCTTCTTCTT 59.450 45.455 0.00 0.00 40.37 2.52
1019 2407 1.876156 CAGCAAGAAACCTCGCTTCTT 59.124 47.619 0.00 0.00 42.52 2.52
1022 2410 0.536006 AGCAGCAAGAAACCTCGCTT 60.536 50.000 0.00 0.00 30.72 4.68
1040 2428 4.753662 TCGTCCGGTGGGAGGGAG 62.754 72.222 0.00 0.00 44.97 4.30
1152 2540 3.630148 CATGTCATCGGCGGCGTC 61.630 66.667 31.06 18.85 0.00 5.19
1247 2635 0.891373 CCCTCTCATCGCATCCGTAT 59.109 55.000 0.00 0.00 35.54 3.06
1253 2641 2.865598 CGCCTCCCTCTCATCGCAT 61.866 63.158 0.00 0.00 0.00 4.73
1270 2658 3.847602 CCTGCTCCTGCTCCTCCG 61.848 72.222 0.00 0.00 40.48 4.63
1360 2754 1.467883 CGACGGCGTACAGGTAATCAA 60.468 52.381 14.74 0.00 0.00 2.57
1361 2755 0.099259 CGACGGCGTACAGGTAATCA 59.901 55.000 14.74 0.00 0.00 2.57
1364 2758 1.501741 GTCGACGGCGTACAGGTAA 59.498 57.895 14.74 0.00 38.98 2.85
1760 3154 2.185350 CGCCGCATCTTCTGGTCT 59.815 61.111 0.00 0.00 0.00 3.85
2168 3562 0.183731 GGTTCATGGGGTGGATCTCC 59.816 60.000 0.00 0.00 37.17 3.71
2358 3752 1.135257 CGACTTCTCGTCCATCTTGCT 60.135 52.381 0.00 0.00 39.56 3.91
2405 3799 4.641989 AGGTTGTTCATGAGGAATATGTGC 59.358 41.667 0.00 0.00 37.93 4.57
2474 3868 4.194720 ATCCAGTCGTCGCCGAGC 62.195 66.667 0.00 0.00 45.26 5.03
2810 4207 3.181485 CGAGATCCTCAAGGGTGTACTTC 60.181 52.174 0.00 0.00 36.25 3.01
2891 4288 2.043450 AGAGGTCCTCTGCTCCGG 60.043 66.667 21.21 0.00 39.62 5.14
2904 4301 1.739562 GCGGAGTCACAAGCAGAGG 60.740 63.158 0.00 0.00 0.00 3.69
2919 4316 0.449388 GCCTCTGAAGAATGTTGCGG 59.551 55.000 0.00 0.00 0.00 5.69
2920 4317 1.129998 CTGCCTCTGAAGAATGTTGCG 59.870 52.381 0.00 0.00 0.00 4.85
3003 4419 3.981071 AGTACTGGTGAGCAATGCTTA 57.019 42.857 9.91 1.19 39.88 3.09
3022 4438 4.330894 TCGACAATGGACGTGTACTACTAG 59.669 45.833 0.00 0.00 33.91 2.57
3024 4440 3.076621 TCGACAATGGACGTGTACTACT 58.923 45.455 0.00 0.00 33.91 2.57
3033 4449 1.655597 CAGATGTGTCGACAATGGACG 59.344 52.381 21.95 3.76 37.22 4.79
3063 4479 9.445878 CACTATATATACACTCCCGAGTTCTTA 57.554 37.037 0.00 0.00 40.20 2.10
3069 4485 6.701145 ATGCACTATATATACACTCCCGAG 57.299 41.667 0.00 0.00 0.00 4.63
3072 4488 8.713708 ATCCTATGCACTATATATACACTCCC 57.286 38.462 0.00 0.00 0.00 4.30
3093 4511 9.807921 TCAGAGTTTAAGTTTTATGGAAATCCT 57.192 29.630 0.44 0.00 36.82 3.24
3132 4550 4.609559 CGCTTGCGTCTGTATTGTGTTAAA 60.610 41.667 6.86 0.00 0.00 1.52
3133 4551 3.120820 CGCTTGCGTCTGTATTGTGTTAA 60.121 43.478 6.86 0.00 0.00 2.01
3134 4552 2.410392 CGCTTGCGTCTGTATTGTGTTA 59.590 45.455 6.86 0.00 0.00 2.41
3135 4553 1.194547 CGCTTGCGTCTGTATTGTGTT 59.805 47.619 6.86 0.00 0.00 3.32
3136 4554 0.790207 CGCTTGCGTCTGTATTGTGT 59.210 50.000 6.86 0.00 0.00 3.72
3137 4555 0.519175 GCGCTTGCGTCTGTATTGTG 60.519 55.000 16.38 0.00 0.00 3.33
3138 4556 0.670546 AGCGCTTGCGTCTGTATTGT 60.671 50.000 16.38 0.00 45.69 2.71
3139 4557 0.025513 GAGCGCTTGCGTCTGTATTG 59.974 55.000 13.26 0.00 45.69 1.90
3140 4558 0.389817 TGAGCGCTTGCGTCTGTATT 60.390 50.000 13.26 0.00 45.69 1.89
3141 4559 0.179100 ATGAGCGCTTGCGTCTGTAT 60.179 50.000 13.26 7.95 45.69 2.29
3142 4560 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
3143 4561 1.078759 GTATGAGCGCTTGCGTCTGT 61.079 55.000 13.26 7.66 45.69 3.41
3144 4562 1.078201 TGTATGAGCGCTTGCGTCTG 61.078 55.000 13.26 0.00 45.69 3.51
3145 4563 0.179100 ATGTATGAGCGCTTGCGTCT 60.179 50.000 13.26 13.17 45.69 4.18
3146 4564 1.190323 GTATGTATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
3147 4565 1.209128 GTATGTATGAGCGCTTGCGT 58.791 50.000 13.26 3.97 45.69 5.24
3148 4566 0.159554 CGTATGTATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
3149 4567 0.111089 GCGTATGTATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
3154 4572 3.119628 GTGTATGTGCGTATGTATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
3155 4573 4.299155 AGTGTATGTGCGTATGTATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
3156 4574 4.613031 CGAGTGTATGTGCGTATGTATGAG 59.387 45.833 0.00 0.00 0.00 2.90
3157 4575 4.533222 CGAGTGTATGTGCGTATGTATGA 58.467 43.478 0.00 0.00 0.00 2.15
3158 4576 3.119628 GCGAGTGTATGTGCGTATGTATG 59.880 47.826 0.00 0.00 0.00 2.39
3159 4577 3.305964 GCGAGTGTATGTGCGTATGTAT 58.694 45.455 0.00 0.00 0.00 2.29
3160 4578 2.542205 GGCGAGTGTATGTGCGTATGTA 60.542 50.000 0.00 0.00 0.00 2.29
3161 4579 1.556564 GCGAGTGTATGTGCGTATGT 58.443 50.000 0.00 0.00 0.00 2.29
3162 4580 0.852777 GGCGAGTGTATGTGCGTATG 59.147 55.000 0.00 0.00 0.00 2.39
3163 4581 0.249322 GGGCGAGTGTATGTGCGTAT 60.249 55.000 0.00 0.00 0.00 3.06
3164 4582 1.140161 GGGCGAGTGTATGTGCGTA 59.860 57.895 0.00 0.00 0.00 4.42
3165 4583 2.125673 GGGCGAGTGTATGTGCGT 60.126 61.111 0.00 0.00 0.00 5.24
3166 4584 2.011741 TAGGGGCGAGTGTATGTGCG 62.012 60.000 0.00 0.00 0.00 5.34
3167 4585 0.393077 ATAGGGGCGAGTGTATGTGC 59.607 55.000 0.00 0.00 0.00 4.57
3168 4586 1.686587 TCATAGGGGCGAGTGTATGTG 59.313 52.381 0.00 0.00 0.00 3.21
3169 4587 2.082140 TCATAGGGGCGAGTGTATGT 57.918 50.000 0.00 0.00 0.00 2.29
3170 4588 3.329386 CATTCATAGGGGCGAGTGTATG 58.671 50.000 0.00 0.00 0.00 2.39
3171 4589 2.289694 GCATTCATAGGGGCGAGTGTAT 60.290 50.000 0.00 0.00 0.00 2.29
3172 4590 1.070134 GCATTCATAGGGGCGAGTGTA 59.930 52.381 0.00 0.00 0.00 2.90
3173 4591 0.179045 GCATTCATAGGGGCGAGTGT 60.179 55.000 0.00 0.00 0.00 3.55
3174 4592 0.179048 TGCATTCATAGGGGCGAGTG 60.179 55.000 0.00 0.00 0.00 3.51
3175 4593 0.179045 GTGCATTCATAGGGGCGAGT 60.179 55.000 0.00 0.00 0.00 4.18
3176 4594 0.179048 TGTGCATTCATAGGGGCGAG 60.179 55.000 0.00 0.00 0.00 5.03
3177 4595 0.463654 GTGTGCATTCATAGGGGCGA 60.464 55.000 0.00 0.00 0.00 5.54
3178 4596 0.747644 TGTGTGCATTCATAGGGGCG 60.748 55.000 0.00 0.00 0.00 6.13
3179 4597 1.696063 ATGTGTGCATTCATAGGGGC 58.304 50.000 5.06 0.00 29.54 5.80
3180 4598 2.807967 CGTATGTGTGCATTCATAGGGG 59.192 50.000 17.84 8.11 36.58 4.79
3181 4599 2.807967 CCGTATGTGTGCATTCATAGGG 59.192 50.000 24.32 24.32 42.20 3.53
3182 4600 2.224079 GCCGTATGTGTGCATTCATAGG 59.776 50.000 18.29 18.29 36.58 2.57
3183 4601 2.871633 TGCCGTATGTGTGCATTCATAG 59.128 45.455 12.05 5.51 36.58 2.23
3184 4602 2.911484 TGCCGTATGTGTGCATTCATA 58.089 42.857 8.90 8.90 36.58 2.15
3185 4603 1.748950 TGCCGTATGTGTGCATTCAT 58.251 45.000 10.52 10.52 36.58 2.57
3186 4604 1.748950 ATGCCGTATGTGTGCATTCA 58.251 45.000 0.00 0.00 42.79 2.57
3187 4605 3.498018 TGATATGCCGTATGTGTGCATTC 59.502 43.478 1.19 1.44 42.79 2.67
3188 4606 3.475575 TGATATGCCGTATGTGTGCATT 58.524 40.909 1.19 0.00 42.79 3.56
3189 4607 3.124578 TGATATGCCGTATGTGTGCAT 57.875 42.857 0.00 0.00 46.68 3.96
3190 4608 2.611225 TGATATGCCGTATGTGTGCA 57.389 45.000 0.00 0.00 39.68 4.57
3191 4609 3.329386 AGATGATATGCCGTATGTGTGC 58.671 45.455 0.00 0.00 0.00 4.57
3192 4610 4.990426 TCAAGATGATATGCCGTATGTGTG 59.010 41.667 0.00 0.00 0.00 3.82
3193 4611 5.011023 TCTCAAGATGATATGCCGTATGTGT 59.989 40.000 0.00 0.00 0.00 3.72
3194 4612 5.473039 TCTCAAGATGATATGCCGTATGTG 58.527 41.667 0.00 0.00 0.00 3.21
3195 4613 5.728637 TCTCAAGATGATATGCCGTATGT 57.271 39.130 0.00 0.00 0.00 2.29
3196 4614 7.606858 AAATCTCAAGATGATATGCCGTATG 57.393 36.000 0.00 0.00 34.49 2.39
3197 4615 7.489435 CGTAAATCTCAAGATGATATGCCGTAT 59.511 37.037 0.00 0.00 34.49 3.06
3198 4616 6.806739 CGTAAATCTCAAGATGATATGCCGTA 59.193 38.462 0.00 0.00 34.49 4.02
3199 4617 5.635280 CGTAAATCTCAAGATGATATGCCGT 59.365 40.000 0.00 0.00 34.49 5.68
3200 4618 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
3201 4619 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
3202 4620 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
3203 4621 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
3206 4624 8.824781 CAATGACTTCGTAAATCTCAAGATGAT 58.175 33.333 0.00 0.00 34.49 2.45
3207 4625 7.819415 ACAATGACTTCGTAAATCTCAAGATGA 59.181 33.333 0.00 0.00 34.49 2.92
3208 4626 7.968246 ACAATGACTTCGTAAATCTCAAGATG 58.032 34.615 0.00 0.00 34.49 2.90
3209 4627 9.307121 CTACAATGACTTCGTAAATCTCAAGAT 57.693 33.333 0.00 0.00 36.07 2.40
3210 4628 7.759886 CCTACAATGACTTCGTAAATCTCAAGA 59.240 37.037 0.00 0.00 0.00 3.02
3211 4629 7.464710 GCCTACAATGACTTCGTAAATCTCAAG 60.465 40.741 0.00 0.00 0.00 3.02
3212 4630 6.312918 GCCTACAATGACTTCGTAAATCTCAA 59.687 38.462 0.00 0.00 0.00 3.02
3213 4631 5.810587 GCCTACAATGACTTCGTAAATCTCA 59.189 40.000 0.00 0.00 0.00 3.27
3214 4632 5.810587 TGCCTACAATGACTTCGTAAATCTC 59.189 40.000 0.00 0.00 0.00 2.75
3215 4633 5.581085 GTGCCTACAATGACTTCGTAAATCT 59.419 40.000 0.00 0.00 0.00 2.40
3216 4634 5.581085 AGTGCCTACAATGACTTCGTAAATC 59.419 40.000 0.00 0.00 0.00 2.17
3217 4635 5.488341 AGTGCCTACAATGACTTCGTAAAT 58.512 37.500 0.00 0.00 0.00 1.40
3218 4636 4.890088 AGTGCCTACAATGACTTCGTAAA 58.110 39.130 0.00 0.00 0.00 2.01
3219 4637 4.530710 AGTGCCTACAATGACTTCGTAA 57.469 40.909 0.00 0.00 0.00 3.18
3220 4638 4.491676 GAAGTGCCTACAATGACTTCGTA 58.508 43.478 0.00 0.00 36.13 3.43
3221 4639 3.326747 GAAGTGCCTACAATGACTTCGT 58.673 45.455 0.00 0.00 36.13 3.85
3222 4640 3.999229 GAAGTGCCTACAATGACTTCG 57.001 47.619 0.00 0.00 36.13 3.79
3223 4641 3.326747 ACGAAGTGCCTACAATGACTTC 58.673 45.455 0.00 0.00 42.51 3.01
3224 4642 3.402628 ACGAAGTGCCTACAATGACTT 57.597 42.857 0.00 0.00 42.51 3.01
3251 4669 0.739813 GGTGGGATGAGACGTTTCCG 60.740 60.000 3.33 0.00 40.83 4.30
3252 4670 0.739813 CGGTGGGATGAGACGTTTCC 60.740 60.000 3.33 1.76 0.00 3.13
3253 4671 0.245539 TCGGTGGGATGAGACGTTTC 59.754 55.000 0.00 0.00 0.00 2.78
3254 4672 0.682852 TTCGGTGGGATGAGACGTTT 59.317 50.000 0.00 0.00 0.00 3.60
3255 4673 0.682852 TTTCGGTGGGATGAGACGTT 59.317 50.000 0.00 0.00 0.00 3.99
3256 4674 0.246635 CTTTCGGTGGGATGAGACGT 59.753 55.000 0.00 0.00 0.00 4.34
3257 4675 1.084370 GCTTTCGGTGGGATGAGACG 61.084 60.000 0.00 0.00 0.00 4.18
3258 4676 1.084370 CGCTTTCGGTGGGATGAGAC 61.084 60.000 0.00 0.00 0.00 3.36
3259 4677 1.218047 CGCTTTCGGTGGGATGAGA 59.782 57.895 0.00 0.00 0.00 3.27
3260 4678 0.174845 TACGCTTTCGGTGGGATGAG 59.825 55.000 0.00 0.00 40.69 2.90
3261 4679 0.828022 ATACGCTTTCGGTGGGATGA 59.172 50.000 0.00 0.00 40.69 2.92
3262 4680 1.217882 GATACGCTTTCGGTGGGATG 58.782 55.000 0.00 0.00 40.69 3.51
3263 4681 0.249322 CGATACGCTTTCGGTGGGAT 60.249 55.000 0.00 0.00 40.69 3.85
3264 4682 1.140161 CGATACGCTTTCGGTGGGA 59.860 57.895 0.00 0.00 40.69 4.37
3265 4683 3.700961 CGATACGCTTTCGGTGGG 58.299 61.111 0.00 0.00 40.69 4.61
3276 4694 1.847818 TCAGGATTTTCGGCGATACG 58.152 50.000 11.76 0.00 0.00 3.06
3277 4695 4.813296 ATTTCAGGATTTTCGGCGATAC 57.187 40.909 11.76 0.00 0.00 2.24
3278 4696 6.928979 TTTATTTCAGGATTTTCGGCGATA 57.071 33.333 11.76 2.15 0.00 2.92
3279 4697 5.828299 TTTATTTCAGGATTTTCGGCGAT 57.172 34.783 11.76 0.00 0.00 4.58
3280 4698 5.355630 TGATTTATTTCAGGATTTTCGGCGA 59.644 36.000 4.99 4.99 0.00 5.54
3281 4699 5.577835 TGATTTATTTCAGGATTTTCGGCG 58.422 37.500 0.00 0.00 0.00 6.46
3282 4700 6.476706 CCTTGATTTATTTCAGGATTTTCGGC 59.523 38.462 0.00 0.00 0.00 5.54
3283 4701 7.771183 TCCTTGATTTATTTCAGGATTTTCGG 58.229 34.615 0.00 0.00 0.00 4.30
3284 4702 9.807649 ATTCCTTGATTTATTTCAGGATTTTCG 57.192 29.630 0.00 0.00 0.00 3.46
3296 4714 8.784043 GGTGCTCGTATTATTCCTTGATTTATT 58.216 33.333 0.00 0.00 0.00 1.40
3297 4715 7.936847 TGGTGCTCGTATTATTCCTTGATTTAT 59.063 33.333 0.00 0.00 0.00 1.40
3298 4716 7.225931 GTGGTGCTCGTATTATTCCTTGATTTA 59.774 37.037 0.00 0.00 0.00 1.40
3299 4717 6.038271 GTGGTGCTCGTATTATTCCTTGATTT 59.962 38.462 0.00 0.00 0.00 2.17
3300 4718 5.527582 GTGGTGCTCGTATTATTCCTTGATT 59.472 40.000 0.00 0.00 0.00 2.57
3301 4719 5.057149 GTGGTGCTCGTATTATTCCTTGAT 58.943 41.667 0.00 0.00 0.00 2.57
3302 4720 4.439057 GTGGTGCTCGTATTATTCCTTGA 58.561 43.478 0.00 0.00 0.00 3.02
3303 4721 3.245284 CGTGGTGCTCGTATTATTCCTTG 59.755 47.826 0.00 0.00 0.00 3.61
3304 4722 3.131577 TCGTGGTGCTCGTATTATTCCTT 59.868 43.478 0.00 0.00 0.00 3.36
3305 4723 2.691526 TCGTGGTGCTCGTATTATTCCT 59.308 45.455 0.00 0.00 0.00 3.36
3306 4724 2.793232 GTCGTGGTGCTCGTATTATTCC 59.207 50.000 0.00 0.00 0.00 3.01
3307 4725 3.703420 AGTCGTGGTGCTCGTATTATTC 58.297 45.455 0.00 0.00 0.00 1.75
3308 4726 3.795623 AGTCGTGGTGCTCGTATTATT 57.204 42.857 0.00 0.00 0.00 1.40
3309 4727 3.795623 AAGTCGTGGTGCTCGTATTAT 57.204 42.857 0.00 0.00 0.00 1.28
3310 4728 4.700268 TTAAGTCGTGGTGCTCGTATTA 57.300 40.909 0.00 0.00 0.00 0.98
3311 4729 3.581024 TTAAGTCGTGGTGCTCGTATT 57.419 42.857 0.00 0.00 0.00 1.89
3312 4730 3.248266 GTTTAAGTCGTGGTGCTCGTAT 58.752 45.455 0.00 0.00 0.00 3.06
3313 4731 2.607771 GGTTTAAGTCGTGGTGCTCGTA 60.608 50.000 0.00 0.00 0.00 3.43
3314 4732 1.494824 GTTTAAGTCGTGGTGCTCGT 58.505 50.000 0.00 0.00 0.00 4.18
3315 4733 0.788391 GGTTTAAGTCGTGGTGCTCG 59.212 55.000 0.00 0.00 0.00 5.03
3316 4734 2.165319 AGGTTTAAGTCGTGGTGCTC 57.835 50.000 0.00 0.00 0.00 4.26
3317 4735 2.158871 TCAAGGTTTAAGTCGTGGTGCT 60.159 45.455 0.00 0.00 0.00 4.40
3318 4736 2.215196 TCAAGGTTTAAGTCGTGGTGC 58.785 47.619 0.00 0.00 0.00 5.01
3319 4737 3.188460 CCATCAAGGTTTAAGTCGTGGTG 59.812 47.826 0.00 0.00 0.00 4.17
3320 4738 3.408634 CCATCAAGGTTTAAGTCGTGGT 58.591 45.455 0.00 0.00 0.00 4.16
3321 4739 2.161609 GCCATCAAGGTTTAAGTCGTGG 59.838 50.000 0.00 0.00 40.61 4.94
3322 4740 3.074412 AGCCATCAAGGTTTAAGTCGTG 58.926 45.455 0.00 0.00 40.61 4.35
3323 4741 3.074412 CAGCCATCAAGGTTTAAGTCGT 58.926 45.455 0.00 0.00 40.61 4.34
3324 4742 2.420022 CCAGCCATCAAGGTTTAAGTCG 59.580 50.000 0.00 0.00 40.61 4.18
3325 4743 2.755103 CCCAGCCATCAAGGTTTAAGTC 59.245 50.000 0.00 0.00 40.61 3.01
3326 4744 2.378547 TCCCAGCCATCAAGGTTTAAGT 59.621 45.455 0.00 0.00 40.61 2.24
3327 4745 3.085952 TCCCAGCCATCAAGGTTTAAG 57.914 47.619 0.00 0.00 40.61 1.85
3328 4746 3.534357 TTCCCAGCCATCAAGGTTTAA 57.466 42.857 0.00 0.00 40.61 1.52
3329 4747 3.756082 ATTCCCAGCCATCAAGGTTTA 57.244 42.857 0.00 0.00 40.61 2.01
3330 4748 2.629017 ATTCCCAGCCATCAAGGTTT 57.371 45.000 0.00 0.00 40.61 3.27
3331 4749 2.358195 GGTATTCCCAGCCATCAAGGTT 60.358 50.000 0.00 0.00 40.61 3.50
3332 4750 1.215423 GGTATTCCCAGCCATCAAGGT 59.785 52.381 0.00 0.00 40.61 3.50
3333 4751 1.215173 TGGTATTCCCAGCCATCAAGG 59.785 52.381 0.00 0.00 38.72 3.61
3334 4752 2.092212 AGTGGTATTCCCAGCCATCAAG 60.092 50.000 0.00 0.00 46.45 3.02
3335 4753 1.922447 AGTGGTATTCCCAGCCATCAA 59.078 47.619 0.00 0.00 46.45 2.57
3336 4754 1.212688 CAGTGGTATTCCCAGCCATCA 59.787 52.381 0.00 0.00 46.45 3.07
3337 4755 1.212935 ACAGTGGTATTCCCAGCCATC 59.787 52.381 0.00 0.00 46.45 3.51
3338 4756 1.212935 GACAGTGGTATTCCCAGCCAT 59.787 52.381 0.00 0.00 46.45 4.40
3339 4757 0.618458 GACAGTGGTATTCCCAGCCA 59.382 55.000 0.00 0.00 46.45 4.75
3340 4758 0.107165 GGACAGTGGTATTCCCAGCC 60.107 60.000 0.00 0.00 46.45 4.85
3341 4759 3.478540 GGACAGTGGTATTCCCAGC 57.521 57.895 0.00 0.00 46.45 4.85
3345 4763 3.134262 GGTTAGAGGGACAGTGGTATTCC 59.866 52.174 0.00 0.00 0.00 3.01
3346 4764 3.773119 TGGTTAGAGGGACAGTGGTATTC 59.227 47.826 0.00 0.00 0.00 1.75
3347 4765 3.798515 TGGTTAGAGGGACAGTGGTATT 58.201 45.455 0.00 0.00 0.00 1.89
3348 4766 3.484953 TGGTTAGAGGGACAGTGGTAT 57.515 47.619 0.00 0.00 0.00 2.73
3349 4767 3.012502 AGATGGTTAGAGGGACAGTGGTA 59.987 47.826 0.00 0.00 0.00 3.25
3350 4768 2.188817 GATGGTTAGAGGGACAGTGGT 58.811 52.381 0.00 0.00 0.00 4.16
3351 4769 2.432510 GAGATGGTTAGAGGGACAGTGG 59.567 54.545 0.00 0.00 0.00 4.00
3352 4770 3.099905 TGAGATGGTTAGAGGGACAGTG 58.900 50.000 0.00 0.00 0.00 3.66
3353 4771 3.474798 TGAGATGGTTAGAGGGACAGT 57.525 47.619 0.00 0.00 0.00 3.55
3354 4772 3.118592 GGTTGAGATGGTTAGAGGGACAG 60.119 52.174 0.00 0.00 0.00 3.51
3355 4773 2.838202 GGTTGAGATGGTTAGAGGGACA 59.162 50.000 0.00 0.00 0.00 4.02
3356 4774 2.838202 TGGTTGAGATGGTTAGAGGGAC 59.162 50.000 0.00 0.00 0.00 4.46
3357 4775 2.838202 GTGGTTGAGATGGTTAGAGGGA 59.162 50.000 0.00 0.00 0.00 4.20
3358 4776 2.571653 TGTGGTTGAGATGGTTAGAGGG 59.428 50.000 0.00 0.00 0.00 4.30
3359 4777 3.369892 CCTGTGGTTGAGATGGTTAGAGG 60.370 52.174 0.00 0.00 0.00 3.69
3360 4778 3.261897 ACCTGTGGTTGAGATGGTTAGAG 59.738 47.826 0.00 0.00 27.29 2.43
3361 4779 3.248024 ACCTGTGGTTGAGATGGTTAGA 58.752 45.455 0.00 0.00 27.29 2.10
3362 4780 3.703001 ACCTGTGGTTGAGATGGTTAG 57.297 47.619 0.00 0.00 27.29 2.34
3376 4794 0.238289 GATGTGCGAACCAACCTGTG 59.762 55.000 0.00 0.00 0.00 3.66
3377 4795 0.179032 TGATGTGCGAACCAACCTGT 60.179 50.000 0.00 0.00 0.00 4.00
3378 4796 0.518636 CTGATGTGCGAACCAACCTG 59.481 55.000 0.00 0.00 0.00 4.00
3379 4797 0.396435 TCTGATGTGCGAACCAACCT 59.604 50.000 0.00 0.00 0.00 3.50
3380 4798 1.453155 ATCTGATGTGCGAACCAACC 58.547 50.000 0.00 0.00 0.00 3.77
3381 4799 3.559238 AAATCTGATGTGCGAACCAAC 57.441 42.857 0.00 0.00 0.00 3.77
3382 4800 4.582701 AAAAATCTGATGTGCGAACCAA 57.417 36.364 0.00 0.00 0.00 3.67
3383 4801 5.697473 TTAAAAATCTGATGTGCGAACCA 57.303 34.783 0.00 0.00 0.00 3.67
3384 4802 5.572896 CCTTTAAAAATCTGATGTGCGAACC 59.427 40.000 0.00 0.00 0.00 3.62
3385 4803 5.572896 CCCTTTAAAAATCTGATGTGCGAAC 59.427 40.000 0.00 0.00 0.00 3.95
3386 4804 5.708948 CCCTTTAAAAATCTGATGTGCGAA 58.291 37.500 0.00 0.00 0.00 4.70
3387 4805 4.380444 GCCCTTTAAAAATCTGATGTGCGA 60.380 41.667 0.00 0.00 0.00 5.10
3388 4806 3.859386 GCCCTTTAAAAATCTGATGTGCG 59.141 43.478 0.00 0.00 0.00 5.34
3389 4807 4.183865 GGCCCTTTAAAAATCTGATGTGC 58.816 43.478 0.00 0.00 0.00 4.57
3390 4808 5.404466 TGGCCCTTTAAAAATCTGATGTG 57.596 39.130 0.00 0.00 0.00 3.21
3391 4809 4.467438 CCTGGCCCTTTAAAAATCTGATGT 59.533 41.667 0.00 0.00 0.00 3.06
3392 4810 4.141869 CCCTGGCCCTTTAAAAATCTGATG 60.142 45.833 0.00 0.00 0.00 3.07
3393 4811 4.033009 CCCTGGCCCTTTAAAAATCTGAT 58.967 43.478 0.00 0.00 0.00 2.90
3394 4812 3.440127 CCCTGGCCCTTTAAAAATCTGA 58.560 45.455 0.00 0.00 0.00 3.27
3395 4813 2.093500 GCCCTGGCCCTTTAAAAATCTG 60.093 50.000 0.00 0.00 34.56 2.90
3396 4814 2.187958 GCCCTGGCCCTTTAAAAATCT 58.812 47.619 0.00 0.00 34.56 2.40
3397 4815 2.691409 GCCCTGGCCCTTTAAAAATC 57.309 50.000 0.00 0.00 34.56 2.17
3409 4827 2.266689 CAAAGCATTGGCCCTGGC 59.733 61.111 0.00 0.00 42.56 4.85
3417 4835 1.135689 GGCACGACTACCAAAGCATTG 60.136 52.381 0.00 0.00 36.25 2.82
3418 4836 1.165270 GGCACGACTACCAAAGCATT 58.835 50.000 0.00 0.00 0.00 3.56
3419 4837 0.036164 TGGCACGACTACCAAAGCAT 59.964 50.000 0.00 0.00 31.46 3.79
3420 4838 0.036164 ATGGCACGACTACCAAAGCA 59.964 50.000 0.00 0.00 39.96 3.91
3421 4839 0.447801 CATGGCACGACTACCAAAGC 59.552 55.000 0.00 0.00 39.96 3.51
3422 4840 2.093306 TCATGGCACGACTACCAAAG 57.907 50.000 0.00 0.00 39.96 2.77
3423 4841 2.027653 TCATCATGGCACGACTACCAAA 60.028 45.455 0.00 0.00 39.96 3.28
3424 4842 1.552792 TCATCATGGCACGACTACCAA 59.447 47.619 0.00 0.00 39.96 3.67
3425 4843 1.136891 CTCATCATGGCACGACTACCA 59.863 52.381 0.00 0.00 41.06 3.25
3426 4844 1.858091 CTCATCATGGCACGACTACC 58.142 55.000 0.00 0.00 0.00 3.18
3427 4845 1.212616 GCTCATCATGGCACGACTAC 58.787 55.000 0.00 0.00 0.00 2.73
3428 4846 0.823460 TGCTCATCATGGCACGACTA 59.177 50.000 0.00 0.00 33.23 2.59
3429 4847 0.742281 GTGCTCATCATGGCACGACT 60.742 55.000 13.40 0.00 46.87 4.18
3430 4848 1.717937 GTGCTCATCATGGCACGAC 59.282 57.895 13.40 0.00 46.87 4.34
3431 4849 4.206958 GTGCTCATCATGGCACGA 57.793 55.556 13.40 0.00 46.87 4.35
3437 4855 4.787563 GCTTTACAATCCGTGCTCATCATG 60.788 45.833 0.00 0.00 0.00 3.07
3438 4856 3.313526 GCTTTACAATCCGTGCTCATCAT 59.686 43.478 0.00 0.00 0.00 2.45
3439 4857 2.677836 GCTTTACAATCCGTGCTCATCA 59.322 45.455 0.00 0.00 0.00 3.07
3440 4858 2.677836 TGCTTTACAATCCGTGCTCATC 59.322 45.455 0.00 0.00 0.00 2.92
3441 4859 2.710377 TGCTTTACAATCCGTGCTCAT 58.290 42.857 0.00 0.00 0.00 2.90
3442 4860 2.177394 TGCTTTACAATCCGTGCTCA 57.823 45.000 0.00 0.00 0.00 4.26
3443 4861 2.159517 CCTTGCTTTACAATCCGTGCTC 60.160 50.000 0.00 0.00 37.72 4.26
3444 4862 1.812571 CCTTGCTTTACAATCCGTGCT 59.187 47.619 0.00 0.00 37.72 4.40
3445 4863 1.732405 GCCTTGCTTTACAATCCGTGC 60.732 52.381 0.00 0.00 37.72 5.34
3446 4864 1.812571 AGCCTTGCTTTACAATCCGTG 59.187 47.619 0.00 0.00 37.72 4.94
3447 4865 2.200373 AGCCTTGCTTTACAATCCGT 57.800 45.000 0.00 0.00 37.72 4.69
3448 4866 3.063997 CACTAGCCTTGCTTTACAATCCG 59.936 47.826 0.00 0.00 40.44 4.18
3449 4867 3.378427 CCACTAGCCTTGCTTTACAATCC 59.622 47.826 0.00 0.00 40.44 3.01
3450 4868 3.181496 GCCACTAGCCTTGCTTTACAATC 60.181 47.826 0.00 0.00 40.44 2.67
3451 4869 2.755103 GCCACTAGCCTTGCTTTACAAT 59.245 45.455 0.00 0.00 40.44 2.71
3452 4870 2.159382 GCCACTAGCCTTGCTTTACAA 58.841 47.619 0.00 0.00 40.44 2.41
3453 4871 1.821216 GCCACTAGCCTTGCTTTACA 58.179 50.000 0.00 0.00 40.44 2.41
3464 4882 2.380410 CGTTGACGTGGCCACTAGC 61.380 63.158 32.28 20.90 36.07 3.42
3465 4883 2.380410 GCGTTGACGTGGCCACTAG 61.380 63.158 32.28 20.65 42.22 2.57
3466 4884 2.356553 GCGTTGACGTGGCCACTA 60.357 61.111 32.28 16.44 42.22 2.74
3467 4885 3.750373 AAGCGTTGACGTGGCCACT 62.750 57.895 32.28 19.76 42.22 4.00
3468 4886 2.830285 AAAGCGTTGACGTGGCCAC 61.830 57.895 26.78 26.78 42.22 5.01
3469 4887 2.515057 AAAGCGTTGACGTGGCCA 60.515 55.556 0.00 0.00 42.22 5.36
3470 4888 2.051345 CAAAGCGTTGACGTGGCC 60.051 61.111 6.52 0.00 42.22 5.36
3471 4889 0.040425 ATTCAAAGCGTTGACGTGGC 60.040 50.000 14.89 0.00 43.52 5.01
3472 4890 1.531149 AGATTCAAAGCGTTGACGTGG 59.469 47.619 14.89 0.00 43.52 4.94
3473 4891 2.949714 AGATTCAAAGCGTTGACGTG 57.050 45.000 14.89 0.00 43.52 4.49
3474 4892 4.201589 CGAATAGATTCAAAGCGTTGACGT 60.202 41.667 14.89 6.85 43.52 4.34
3475 4893 4.255999 CGAATAGATTCAAAGCGTTGACG 58.744 43.478 14.89 9.39 43.52 4.35
3476 4894 4.494199 CCCGAATAGATTCAAAGCGTTGAC 60.494 45.833 14.89 4.80 43.52 3.18
3477 4895 3.621268 CCCGAATAGATTCAAAGCGTTGA 59.379 43.478 11.22 11.22 42.12 3.18
3478 4896 3.788797 GCCCGAATAGATTCAAAGCGTTG 60.789 47.826 5.98 5.98 36.61 4.10
3479 4897 2.354821 GCCCGAATAGATTCAAAGCGTT 59.645 45.455 3.31 0.00 36.61 4.84
3480 4898 1.940613 GCCCGAATAGATTCAAAGCGT 59.059 47.619 3.31 0.00 36.61 5.07
3481 4899 1.070577 CGCCCGAATAGATTCAAAGCG 60.071 52.381 12.94 12.94 40.31 4.68
3482 4900 1.334149 GCGCCCGAATAGATTCAAAGC 60.334 52.381 0.00 1.68 36.61 3.51
3483 4901 2.213499 AGCGCCCGAATAGATTCAAAG 58.787 47.619 2.29 0.00 36.61 2.77
3484 4902 2.325583 AGCGCCCGAATAGATTCAAA 57.674 45.000 2.29 0.00 36.61 2.69
3485 4903 3.325870 CATAGCGCCCGAATAGATTCAA 58.674 45.455 2.29 0.00 36.61 2.69
3486 4904 2.930887 GCATAGCGCCCGAATAGATTCA 60.931 50.000 2.29 0.00 33.55 2.57
3487 4905 1.661112 GCATAGCGCCCGAATAGATTC 59.339 52.381 2.29 0.00 32.94 2.52
3488 4906 1.001974 TGCATAGCGCCCGAATAGATT 59.998 47.619 2.29 0.00 41.33 2.40
3489 4907 0.608130 TGCATAGCGCCCGAATAGAT 59.392 50.000 2.29 0.00 41.33 1.98
3490 4908 0.391228 TTGCATAGCGCCCGAATAGA 59.609 50.000 2.29 0.00 41.33 1.98
3491 4909 1.225855 TTTGCATAGCGCCCGAATAG 58.774 50.000 2.29 0.00 41.33 1.73
3492 4910 1.890876 ATTTGCATAGCGCCCGAATA 58.109 45.000 2.29 0.00 41.33 1.75
3493 4911 1.806542 CTATTTGCATAGCGCCCGAAT 59.193 47.619 2.29 4.79 41.33 3.34
3494 4912 1.225855 CTATTTGCATAGCGCCCGAA 58.774 50.000 2.29 0.00 41.33 4.30
3495 4913 0.105964 ACTATTTGCATAGCGCCCGA 59.894 50.000 2.29 0.00 41.33 5.14
3496 4914 1.790755 TACTATTTGCATAGCGCCCG 58.209 50.000 2.29 0.00 41.33 6.13
3497 4915 3.334691 TCATACTATTTGCATAGCGCCC 58.665 45.455 2.29 0.00 41.33 6.13
3498 4916 5.327091 CATTCATACTATTTGCATAGCGCC 58.673 41.667 2.29 0.00 41.33 6.53
3499 4917 4.790140 GCATTCATACTATTTGCATAGCGC 59.210 41.667 0.00 0.00 36.54 5.92
3500 4918 5.930405 TGCATTCATACTATTTGCATAGCG 58.070 37.500 0.00 0.00 38.32 4.26
3526 4944 0.891904 GAGTGGGCGGTGGCTAAAAA 60.892 55.000 0.00 0.00 39.81 1.94
3527 4945 1.302993 GAGTGGGCGGTGGCTAAAA 60.303 57.895 0.00 0.00 39.81 1.52
3528 4946 2.349755 GAGTGGGCGGTGGCTAAA 59.650 61.111 0.00 0.00 39.81 1.85
3529 4947 2.925706 TGAGTGGGCGGTGGCTAA 60.926 61.111 0.00 0.00 39.81 3.09
3530 4948 3.702048 GTGAGTGGGCGGTGGCTA 61.702 66.667 0.00 0.00 39.81 3.93
3533 4951 4.742201 CGAGTGAGTGGGCGGTGG 62.742 72.222 0.00 0.00 0.00 4.61
3534 4952 4.742201 CCGAGTGAGTGGGCGGTG 62.742 72.222 0.00 0.00 38.99 4.94
3535 4953 4.988716 TCCGAGTGAGTGGGCGGT 62.989 66.667 0.00 0.00 43.92 5.68
3536 4954 4.135153 CTCCGAGTGAGTGGGCGG 62.135 72.222 0.00 0.00 44.83 6.13
3537 4955 4.803426 GCTCCGAGTGAGTGGGCG 62.803 72.222 0.00 0.00 43.48 6.13
3538 4956 4.459089 GGCTCCGAGTGAGTGGGC 62.459 72.222 0.00 0.00 43.48 5.36
3539 4957 4.135153 CGGCTCCGAGTGAGTGGG 62.135 72.222 1.35 0.00 43.48 4.61
3540 4958 4.135153 CCGGCTCCGAGTGAGTGG 62.135 72.222 10.28 0.00 43.48 4.00
3541 4959 3.062466 TCCGGCTCCGAGTGAGTG 61.062 66.667 10.28 0.00 43.48 3.51
3542 4960 3.063084 GTCCGGCTCCGAGTGAGT 61.063 66.667 10.28 0.00 43.48 3.41
3543 4961 3.827898 GGTCCGGCTCCGAGTGAG 61.828 72.222 10.28 0.00 44.47 3.51
3545 4963 3.874501 TATAGGGTCCGGCTCCGAGTG 62.875 61.905 10.28 0.00 42.83 3.51
3546 4964 1.713005 TATAGGGTCCGGCTCCGAGT 61.713 60.000 10.28 0.00 42.83 4.18
3547 4965 0.538977 TTATAGGGTCCGGCTCCGAG 60.539 60.000 10.28 0.25 42.83 4.63
3548 4966 0.825010 GTTATAGGGTCCGGCTCCGA 60.825 60.000 10.28 0.00 42.83 4.55
3549 4967 1.111116 TGTTATAGGGTCCGGCTCCG 61.111 60.000 0.00 0.48 39.44 4.63
3550 4968 1.349067 ATGTTATAGGGTCCGGCTCC 58.651 55.000 0.00 0.97 0.00 4.70
3551 4969 2.104281 ACAATGTTATAGGGTCCGGCTC 59.896 50.000 0.00 0.00 0.00 4.70
3552 4970 2.124411 ACAATGTTATAGGGTCCGGCT 58.876 47.619 0.00 0.00 0.00 5.52
3553 4971 2.218603 CACAATGTTATAGGGTCCGGC 58.781 52.381 0.00 0.00 0.00 6.13
3554 4972 2.436542 TCCACAATGTTATAGGGTCCGG 59.563 50.000 0.00 0.00 0.00 5.14
3555 4973 3.386726 TCTCCACAATGTTATAGGGTCCG 59.613 47.826 0.00 0.00 0.00 4.79
3556 4974 4.654262 TCTCTCCACAATGTTATAGGGTCC 59.346 45.833 0.00 0.00 0.00 4.46
3557 4975 5.871396 TCTCTCCACAATGTTATAGGGTC 57.129 43.478 0.00 0.00 0.00 4.46
3558 4976 5.667626 ACATCTCTCCACAATGTTATAGGGT 59.332 40.000 0.00 0.00 29.51 4.34
3559 4977 6.179906 ACATCTCTCCACAATGTTATAGGG 57.820 41.667 0.00 0.00 29.51 3.53
3560 4978 6.703607 GTGACATCTCTCCACAATGTTATAGG 59.296 42.308 0.00 0.00 33.91 2.57
3561 4979 6.419116 CGTGACATCTCTCCACAATGTTATAG 59.581 42.308 0.00 0.00 33.91 1.31
3562 4980 6.273071 CGTGACATCTCTCCACAATGTTATA 58.727 40.000 0.00 0.00 33.91 0.98
3563 4981 5.111989 CGTGACATCTCTCCACAATGTTAT 58.888 41.667 0.00 0.00 33.91 1.89
3564 4982 4.494484 CGTGACATCTCTCCACAATGTTA 58.506 43.478 0.00 0.00 33.91 2.41
3565 4983 3.329386 CGTGACATCTCTCCACAATGTT 58.671 45.455 0.00 0.00 33.91 2.71
3566 4984 2.354103 CCGTGACATCTCTCCACAATGT 60.354 50.000 0.00 0.00 36.37 2.71
3567 4985 2.274437 CCGTGACATCTCTCCACAATG 58.726 52.381 0.00 0.00 0.00 2.82
3576 4994 3.321497 GGATATCAAGCCGTGACATCTC 58.679 50.000 4.83 0.00 39.69 2.75
3593 5011 3.886505 ACGTTTGTTTTGCTGAAGGGATA 59.113 39.130 0.00 0.00 0.00 2.59
3608 5026 6.526566 TTGTTTTTAGCACAAAACGTTTGT 57.473 29.167 15.46 11.80 45.80 2.83
3609 5027 7.066505 AGTTTGTTTTTAGCACAAAACGTTTG 58.933 30.769 15.46 11.16 45.80 2.93
3611 5029 6.399144 CGAGTTTGTTTTTAGCACAAAACGTT 60.399 34.615 15.05 0.00 45.80 3.99
3615 5033 4.030753 CGCGAGTTTGTTTTTAGCACAAAA 59.969 37.500 0.00 0.00 43.89 2.44
3617 5035 3.102276 CGCGAGTTTGTTTTTAGCACAA 58.898 40.909 0.00 0.00 32.16 3.33
3620 5038 2.096174 ACACGCGAGTTTGTTTTTAGCA 59.904 40.909 15.93 0.00 46.40 3.49
3621 5039 2.711885 ACACGCGAGTTTGTTTTTAGC 58.288 42.857 15.93 0.00 46.40 3.09
3622 5040 3.242478 TGGACACGCGAGTTTGTTTTTAG 60.242 43.478 15.93 0.00 46.40 1.85
3623 5041 2.676839 TGGACACGCGAGTTTGTTTTTA 59.323 40.909 15.93 0.00 46.40 1.52
3624 5042 1.469308 TGGACACGCGAGTTTGTTTTT 59.531 42.857 15.93 0.00 46.40 1.94
3629 5047 1.262950 TGATTTGGACACGCGAGTTTG 59.737 47.619 15.93 2.09 46.40 2.93
3651 5069 8.297426 ACAACGAGTCTTTTCTTTCTTTCTTTT 58.703 29.630 0.00 0.00 0.00 2.27
3698 5117 1.203994 GCGAGGGTTGTAGAGTTAGCA 59.796 52.381 0.00 0.00 0.00 3.49
3703 5122 1.935327 GCGAGCGAGGGTTGTAGAGT 61.935 60.000 0.00 0.00 0.00 3.24
3705 5124 2.882876 GCGAGCGAGGGTTGTAGA 59.117 61.111 0.00 0.00 0.00 2.59
3729 5148 2.815308 GTGAGGTCGGCGGATCAT 59.185 61.111 7.21 0.00 0.00 2.45
3740 5159 1.736645 CGACGATTTGGCGTGAGGT 60.737 57.895 0.00 0.00 45.72 3.85
3777 5196 2.011741 AACGACTGTGTGCGAGGTCA 62.012 55.000 0.00 0.00 0.00 4.02
3778 5197 1.299926 AACGACTGTGTGCGAGGTC 60.300 57.895 0.00 0.00 0.00 3.85
3782 5201 1.425267 CCAACAACGACTGTGTGCGA 61.425 55.000 0.00 0.00 38.67 5.10
3784 5203 0.450184 AACCAACAACGACTGTGTGC 59.550 50.000 0.00 0.00 38.67 4.57
3785 5204 1.267334 CGAACCAACAACGACTGTGTG 60.267 52.381 0.00 0.00 38.67 3.82
3786 5205 1.003851 CGAACCAACAACGACTGTGT 58.996 50.000 0.00 0.00 38.67 3.72
3787 5206 0.315869 GCGAACCAACAACGACTGTG 60.316 55.000 0.00 0.00 38.67 3.66
3788 5207 1.433837 GGCGAACCAACAACGACTGT 61.434 55.000 0.00 0.00 41.27 3.55
3794 5213 2.914908 ATGGCGGCGAACCAACAAC 61.915 57.895 12.98 0.00 41.49 3.32
3795 5214 2.596046 ATGGCGGCGAACCAACAA 60.596 55.556 12.98 0.00 41.49 2.83
3796 5215 3.361158 CATGGCGGCGAACCAACA 61.361 61.111 12.98 0.00 41.49 3.33
3798 5217 4.652131 ACCATGGCGGCGAACCAA 62.652 61.111 12.98 0.00 41.49 3.67
3802 5221 4.108299 ATGGACCATGGCGGCGAA 62.108 61.111 12.98 0.00 39.03 4.70
3803 5222 4.854924 CATGGACCATGGCGGCGA 62.855 66.667 24.65 0.00 38.11 5.54
3831 5250 1.215655 GAATCGGCGACATCGAAGGG 61.216 60.000 13.76 0.00 43.02 3.95
3836 5255 2.096909 GGTTAATGAATCGGCGACATCG 60.097 50.000 13.76 0.00 43.27 3.84
3838 5257 3.131396 GAGGTTAATGAATCGGCGACAT 58.869 45.455 13.76 9.77 0.00 3.06
3841 5260 1.202604 GGGAGGTTAATGAATCGGCGA 60.203 52.381 13.87 13.87 0.00 5.54
3851 5270 1.270147 GCAGATACGCGGGAGGTTAAT 60.270 52.381 12.47 0.00 0.00 1.40
3854 5273 2.499685 GCAGATACGCGGGAGGTT 59.500 61.111 12.47 0.00 0.00 3.50
3880 5299 3.060020 GAGGTCCACGAATCGGCGA 62.060 63.158 13.87 13.87 34.83 5.54
3883 5302 1.153628 GGTGAGGTCCACGAATCGG 60.154 63.158 7.80 0.00 46.62 4.18
3903 5322 2.841044 ACGAACCGTGGGAGGTGT 60.841 61.111 0.00 0.00 45.21 4.16
3911 5330 1.075979 TGATGATGCGACGAACCGTG 61.076 55.000 0.00 0.00 41.37 4.94
3912 5331 0.179111 ATGATGATGCGACGAACCGT 60.179 50.000 0.00 0.00 45.10 4.83
3914 5333 0.861837 GGATGATGATGCGACGAACC 59.138 55.000 0.00 0.00 0.00 3.62
3916 5335 0.249868 GGGGATGATGATGCGACGAA 60.250 55.000 0.00 0.00 0.00 3.85
3917 5336 1.115326 AGGGGATGATGATGCGACGA 61.115 55.000 0.00 0.00 0.00 4.20
3919 5338 0.683973 AGAGGGGATGATGATGCGAC 59.316 55.000 0.00 0.00 0.00 5.19
3922 5341 0.400975 AGCAGAGGGGATGATGATGC 59.599 55.000 0.00 0.00 0.00 3.91
3923 5342 4.325119 CTTTAGCAGAGGGGATGATGATG 58.675 47.826 0.00 0.00 0.00 3.07
3924 5343 3.244840 GCTTTAGCAGAGGGGATGATGAT 60.245 47.826 0.00 0.00 41.59 2.45
3925 5344 2.105477 GCTTTAGCAGAGGGGATGATGA 59.895 50.000 0.00 0.00 41.59 2.92
3926 5345 2.106166 AGCTTTAGCAGAGGGGATGATG 59.894 50.000 4.33 0.00 45.16 3.07
3927 5346 2.416638 AGCTTTAGCAGAGGGGATGAT 58.583 47.619 4.33 0.00 45.16 2.45
3928 5347 1.885049 AGCTTTAGCAGAGGGGATGA 58.115 50.000 4.33 0.00 45.16 2.92
3935 5385 3.438434 GGAACAAGGAAGCTTTAGCAGAG 59.562 47.826 0.00 0.00 45.16 3.35
3938 5388 3.222173 TGGAACAAGGAAGCTTTAGCA 57.778 42.857 0.00 0.00 38.75 3.49
3954 5404 0.909610 ACCTTCGGGAGCTGATGGAA 60.910 55.000 10.42 0.08 37.46 3.53
3962 5412 1.723220 GTGTTCTTACCTTCGGGAGC 58.277 55.000 0.00 0.00 38.77 4.70
3965 5415 2.159327 AACGTGTTCTTACCTTCGGG 57.841 50.000 0.00 0.00 41.87 5.14
3966 5416 3.183775 CAGAAACGTGTTCTTACCTTCGG 59.816 47.826 9.38 0.00 0.00 4.30
3968 5418 5.978934 TTCAGAAACGTGTTCTTACCTTC 57.021 39.130 9.38 0.00 0.00 3.46
4024 5474 9.242477 CAGGCGTATCTATTCATACATATTCAG 57.758 37.037 0.00 0.00 30.61 3.02
4046 5496 1.135689 CCGAACACTACATTTGCAGGC 60.136 52.381 0.00 0.00 0.00 4.85
4047 5497 2.151202 ACCGAACACTACATTTGCAGG 58.849 47.619 0.00 0.00 0.00 4.85
4048 5498 3.896648 AACCGAACACTACATTTGCAG 57.103 42.857 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.