Multiple sequence alignment - TraesCS7A01G258700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G258700 chr7A 100.000 4809 0 0 1 4809 250213998 250218806 0.000000e+00 8881.0
1 TraesCS7A01G258700 chr7A 93.548 155 8 2 2888 3040 201987002 201987156 3.740000e-56 230.0
2 TraesCS7A01G258700 chr7A 90.506 158 13 2 2887 3042 486930094 486929937 1.750000e-49 207.0
3 TraesCS7A01G258700 chr7B 93.981 4220 174 41 174 4366 211371349 211375515 0.000000e+00 6312.0
4 TraesCS7A01G258700 chr7B 92.208 154 11 1 2888 3040 155471167 155471320 2.910000e-52 217.0
5 TraesCS7A01G258700 chr7B 91.139 158 12 2 2887 3042 453623444 453623287 3.770000e-51 213.0
6 TraesCS7A01G258700 chr7D 94.314 2515 94 22 1885 4366 235375404 235377902 0.000000e+00 3807.0
7 TraesCS7A01G258700 chr7D 93.286 1534 60 22 174 1687 235372720 235374230 0.000000e+00 2222.0
8 TraesCS7A01G258700 chr7D 95.238 231 9 2 1671 1901 235374247 235374475 9.840000e-97 364.0
9 TraesCS7A01G258700 chr7D 98.429 191 3 0 4368 4558 382069637 382069447 2.140000e-88 337.0
10 TraesCS7A01G258700 chr7D 98.429 191 3 0 4368 4558 626728205 626728395 2.140000e-88 337.0
11 TraesCS7A01G258700 chr7D 97.906 191 4 0 4368 4558 626633954 626634144 9.980000e-87 331.0
12 TraesCS7A01G258700 chr7D 91.139 158 12 2 2887 3042 436961949 436961792 3.770000e-51 213.0
13 TraesCS7A01G258700 chr3B 90.852 634 55 2 1057 1687 748464235 748463602 0.000000e+00 846.0
14 TraesCS7A01G258700 chr3B 90.523 612 54 3 1079 1687 748622856 748622246 0.000000e+00 806.0
15 TraesCS7A01G258700 chr3B 77.730 696 98 27 3136 3807 748619022 748618360 1.630000e-99 374.0
16 TraesCS7A01G258700 chr3B 81.436 404 54 14 2226 2610 748462921 748462520 1.300000e-80 311.0
17 TraesCS7A01G258700 chr3B 84.194 310 40 6 2313 2613 748621597 748621288 4.710000e-75 292.0
18 TraesCS7A01G258700 chr3B 89.381 226 24 0 3582 3807 748458620 748458395 7.880000e-73 285.0
19 TraesCS7A01G258700 chr3B 86.640 247 30 3 4557 4801 950778 950533 2.210000e-68 270.0
20 TraesCS7A01G258700 chr3B 81.333 225 38 4 2666 2889 748462498 748462277 3.820000e-41 180.0
21 TraesCS7A01G258700 chr3B 82.407 108 14 4 4007 4109 748458239 748458132 6.630000e-14 89.8
22 TraesCS7A01G258700 chr3A 90.596 638 57 2 1053 1687 697386045 697385408 0.000000e+00 843.0
23 TraesCS7A01G258700 chr3A 89.969 638 61 2 1053 1687 697284885 697284248 0.000000e+00 821.0
24 TraesCS7A01G258700 chr3A 83.088 408 49 15 2226 2613 697283579 697283172 2.130000e-93 353.0
25 TraesCS7A01G258700 chr3A 78.947 228 42 5 2666 2889 697384432 697384207 3.000000e-32 150.0
26 TraesCS7A01G258700 chr3D 90.523 612 55 2 1079 1687 561451477 561450866 0.000000e+00 806.0
27 TraesCS7A01G258700 chr3D 77.099 786 121 32 3057 3810 561447951 561447193 2.700000e-107 399.0
28 TraesCS7A01G258700 chr3D 98.429 191 3 0 4368 4558 501847668 501847478 2.140000e-88 337.0
29 TraesCS7A01G258700 chr3D 84.615 312 37 9 2313 2613 561450218 561449907 2.810000e-77 300.0
30 TraesCS7A01G258700 chr3D 83.607 122 20 0 2768 2889 561449820 561449699 1.090000e-21 115.0
31 TraesCS7A01G258700 chr3D 81.308 107 17 3 1 106 412815722 412815618 3.080000e-12 84.2
32 TraesCS7A01G258700 chrUn 98.429 191 3 0 4368 4558 417578553 417578363 2.140000e-88 337.0
33 TraesCS7A01G258700 chr6A 97.906 191 4 0 4368 4558 84420878 84421068 9.980000e-87 331.0
34 TraesCS7A01G258700 chr6A 97.906 191 4 0 4368 4558 289135589 289135399 9.980000e-87 331.0
35 TraesCS7A01G258700 chr4D 97.906 191 4 0 4368 4558 123384516 123384326 9.980000e-87 331.0
36 TraesCS7A01G258700 chr4D 97.906 191 4 0 4368 4558 450901929 450902119 9.980000e-87 331.0
37 TraesCS7A01G258700 chr1D 92.079 202 15 1 4607 4807 84074706 84074505 2.830000e-72 283.0
38 TraesCS7A01G258700 chr5A 87.705 244 27 3 4567 4808 229492669 229492427 1.020000e-71 281.0
39 TraesCS7A01G258700 chr5A 89.055 201 22 0 4607 4807 313468313 313468513 2.870000e-62 250.0
40 TraesCS7A01G258700 chr5A 94.156 154 6 3 2888 3039 86662019 86662171 1.040000e-56 231.0
41 TraesCS7A01G258700 chr5A 89.655 58 6 0 86 143 612720442 612720499 1.860000e-09 75.0
42 TraesCS7A01G258700 chr5D 89.756 205 21 0 4603 4807 399990238 399990442 3.690000e-66 263.0
43 TraesCS7A01G258700 chr4B 85.271 258 30 8 4555 4807 626071152 626070898 4.770000e-65 259.0
44 TraesCS7A01G258700 chr2B 86.580 231 30 1 4571 4801 708794900 708795129 2.220000e-63 254.0
45 TraesCS7A01G258700 chr2B 83.721 258 36 6 4554 4807 197575745 197576000 6.220000e-59 239.0
46 TraesCS7A01G258700 chr2B 77.241 145 28 2 1 143 408369050 408368909 3.990000e-11 80.5
47 TraesCS7A01G258700 chr2A 89.500 200 21 0 4608 4807 599304831 599304632 2.220000e-63 254.0
48 TraesCS7A01G258700 chr5B 92.208 154 11 1 2887 3039 98663177 98663330 2.910000e-52 217.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G258700 chr7A 250213998 250218806 4808 False 8881.000000 8881 100.000000 1 4809 1 chr7A.!!$F2 4808
1 TraesCS7A01G258700 chr7B 211371349 211375515 4166 False 6312.000000 6312 93.981000 174 4366 1 chr7B.!!$F2 4192
2 TraesCS7A01G258700 chr7D 235372720 235377902 5182 False 2131.000000 3807 94.279333 174 4366 3 chr7D.!!$F3 4192
3 TraesCS7A01G258700 chr3B 748618360 748622856 4496 True 490.666667 806 84.149000 1079 3807 3 chr3B.!!$R3 2728
4 TraesCS7A01G258700 chr3B 748458132 748464235 6103 True 342.360000 846 85.081800 1057 4109 5 chr3B.!!$R2 3052
5 TraesCS7A01G258700 chr3A 697283172 697284885 1713 True 587.000000 821 86.528500 1053 2613 2 chr3A.!!$R1 1560
6 TraesCS7A01G258700 chr3A 697384207 697386045 1838 True 496.500000 843 84.771500 1053 2889 2 chr3A.!!$R2 1836
7 TraesCS7A01G258700 chr3D 561447193 561451477 4284 True 405.000000 806 83.961000 1079 3810 4 chr3D.!!$R3 2731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.028505 GGTCGACGCGTTAGCTGATA 59.971 55.000 15.53 0.0 42.32 2.15 F
296 304 0.107703 TAGCTGCCGTTGGATTCAGG 60.108 55.000 0.00 0.0 0.00 3.86 F
456 464 0.467384 ATCGGGCCTTGATCTGTGAG 59.533 55.000 0.84 0.0 0.00 3.51 F
1440 1481 0.546598 AAGCCCCTGTTATTCCTCCG 59.453 55.000 0.00 0.0 0.00 4.63 F
2741 4105 1.451936 GGGCAAGGCGGTATCATCT 59.548 57.895 0.00 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1260 1298 0.652592 CGTTCTTGCCGATGACATCC 59.347 55.000 9.87 0.0 0.00 3.51 R
1486 1527 0.748005 AAGCGGTCATGGAAATCGGG 60.748 55.000 0.00 0.0 0.00 5.14 R
2224 3520 4.576463 ACAAAGTTCACCAACAGCTTCTAG 59.424 41.667 0.00 0.0 34.60 2.43 R
3107 7159 1.160329 GCCTATGCGCCTACAACTGG 61.160 60.000 4.18 0.0 0.00 4.00 R
4738 9697 0.031043 CGCCCGTATATGACCACGAA 59.969 55.000 0.00 0.0 40.56 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.491234 AAATTTACGTGCGGACATGAAA 57.509 36.364 8.11 4.23 36.58 2.69
22 23 4.695217 AATTTACGTGCGGACATGAAAT 57.305 36.364 8.11 6.45 36.58 2.17
34 35 1.391577 CATGAAATGGGTCATCGCCA 58.608 50.000 0.00 0.00 41.79 5.69
35 36 1.958579 CATGAAATGGGTCATCGCCAT 59.041 47.619 0.00 0.00 41.79 4.40
36 37 2.142356 TGAAATGGGTCATCGCCATT 57.858 45.000 0.00 0.00 36.72 3.16
37 38 1.750206 TGAAATGGGTCATCGCCATTG 59.250 47.619 5.19 0.00 35.96 2.82
38 39 1.067516 GAAATGGGTCATCGCCATTGG 59.932 52.381 5.19 0.00 35.96 3.16
39 40 0.258484 AATGGGTCATCGCCATTGGA 59.742 50.000 6.95 0.00 35.16 3.53
40 41 0.466189 ATGGGTCATCGCCATTGGAC 60.466 55.000 6.95 0.00 0.00 4.02
41 42 2.180204 GGGTCATCGCCATTGGACG 61.180 63.158 6.95 9.89 0.00 4.79
42 43 2.709475 GTCATCGCCATTGGACGC 59.291 61.111 6.95 0.00 0.00 5.19
43 44 2.106074 GTCATCGCCATTGGACGCA 61.106 57.895 6.95 1.31 0.00 5.24
44 45 2.106074 TCATCGCCATTGGACGCAC 61.106 57.895 6.95 0.00 0.00 5.34
45 46 2.824041 ATCGCCATTGGACGCACC 60.824 61.111 6.95 0.00 39.54 5.01
46 47 3.329542 ATCGCCATTGGACGCACCT 62.330 57.895 6.95 0.00 39.86 4.00
47 48 3.499737 CGCCATTGGACGCACCTC 61.500 66.667 6.95 0.00 39.86 3.85
48 49 3.134127 GCCATTGGACGCACCTCC 61.134 66.667 6.95 0.00 39.86 4.30
49 50 2.671070 CCATTGGACGCACCTCCT 59.329 61.111 0.00 0.00 39.86 3.69
50 51 1.904771 CCATTGGACGCACCTCCTA 59.095 57.895 0.00 0.00 39.86 2.94
51 52 0.462047 CCATTGGACGCACCTCCTAC 60.462 60.000 0.00 0.00 39.86 3.18
52 53 0.537188 CATTGGACGCACCTCCTACT 59.463 55.000 1.15 0.00 39.86 2.57
53 54 0.824759 ATTGGACGCACCTCCTACTC 59.175 55.000 1.15 0.00 39.86 2.59
54 55 0.541063 TTGGACGCACCTCCTACTCA 60.541 55.000 1.15 0.00 39.86 3.41
55 56 0.541063 TGGACGCACCTCCTACTCAA 60.541 55.000 1.15 0.00 39.86 3.02
56 57 0.606604 GGACGCACCTCCTACTCAAA 59.393 55.000 0.00 0.00 35.41 2.69
57 58 1.207329 GGACGCACCTCCTACTCAAAT 59.793 52.381 0.00 0.00 35.41 2.32
58 59 2.541556 GACGCACCTCCTACTCAAATC 58.458 52.381 0.00 0.00 0.00 2.17
59 60 2.166664 GACGCACCTCCTACTCAAATCT 59.833 50.000 0.00 0.00 0.00 2.40
60 61 2.567615 ACGCACCTCCTACTCAAATCTT 59.432 45.455 0.00 0.00 0.00 2.40
61 62 3.767673 ACGCACCTCCTACTCAAATCTTA 59.232 43.478 0.00 0.00 0.00 2.10
62 63 4.142138 ACGCACCTCCTACTCAAATCTTAG 60.142 45.833 0.00 0.00 0.00 2.18
63 64 4.098044 CGCACCTCCTACTCAAATCTTAGA 59.902 45.833 0.00 0.00 0.00 2.10
64 65 5.394224 CGCACCTCCTACTCAAATCTTAGAA 60.394 44.000 0.00 0.00 0.00 2.10
65 66 6.407202 GCACCTCCTACTCAAATCTTAGAAA 58.593 40.000 0.00 0.00 0.00 2.52
66 67 6.536941 GCACCTCCTACTCAAATCTTAGAAAG 59.463 42.308 0.00 0.00 0.00 2.62
67 68 7.044798 CACCTCCTACTCAAATCTTAGAAAGG 58.955 42.308 0.00 0.00 0.00 3.11
68 69 6.157123 ACCTCCTACTCAAATCTTAGAAAGGG 59.843 42.308 0.00 0.00 0.00 3.95
69 70 5.990668 TCCTACTCAAATCTTAGAAAGGGC 58.009 41.667 0.00 0.00 0.00 5.19
70 71 5.487488 TCCTACTCAAATCTTAGAAAGGGCA 59.513 40.000 0.00 0.00 0.00 5.36
71 72 5.819901 CCTACTCAAATCTTAGAAAGGGCAG 59.180 44.000 0.00 0.00 0.00 4.85
72 73 5.505181 ACTCAAATCTTAGAAAGGGCAGA 57.495 39.130 0.00 0.00 0.00 4.26
73 74 5.249420 ACTCAAATCTTAGAAAGGGCAGAC 58.751 41.667 0.00 0.00 0.00 3.51
74 75 4.253685 TCAAATCTTAGAAAGGGCAGACG 58.746 43.478 0.00 0.00 0.00 4.18
75 76 2.317530 ATCTTAGAAAGGGCAGACGC 57.682 50.000 0.00 0.00 37.44 5.19
98 99 4.008035 GGGCGACCGATCTAAACG 57.992 61.111 0.00 0.00 43.64 3.60
126 127 3.651562 AATGAATAAAAGCGTCGTCCG 57.348 42.857 0.00 0.00 40.40 4.79
127 128 2.068837 TGAATAAAAGCGTCGTCCGT 57.931 45.000 0.00 0.00 39.32 4.69
128 129 2.406130 TGAATAAAAGCGTCGTCCGTT 58.594 42.857 0.00 0.00 39.32 4.44
129 130 2.801679 TGAATAAAAGCGTCGTCCGTTT 59.198 40.909 0.00 0.00 42.10 3.60
130 131 3.986572 TGAATAAAAGCGTCGTCCGTTTA 59.013 39.130 0.00 0.00 39.19 2.01
131 132 4.090354 TGAATAAAAGCGTCGTCCGTTTAG 59.910 41.667 0.00 0.00 39.19 1.85
132 133 1.142474 AAAAGCGTCGTCCGTTTAGG 58.858 50.000 0.00 0.00 39.19 2.69
133 134 0.032540 AAAGCGTCGTCCGTTTAGGT 59.967 50.000 0.00 0.00 39.19 3.08
134 135 0.387750 AAGCGTCGTCCGTTTAGGTC 60.388 55.000 0.00 0.00 38.28 3.85
139 140 3.759353 GTCCGTTTAGGTCGACGC 58.241 61.111 9.92 2.53 41.99 5.19
140 141 2.148365 GTCCGTTTAGGTCGACGCG 61.148 63.158 9.92 3.53 41.99 6.01
141 142 2.126734 CCGTTTAGGTCGACGCGT 60.127 61.111 13.85 13.85 37.91 6.01
142 143 1.730547 CCGTTTAGGTCGACGCGTT 60.731 57.895 15.53 0.00 37.91 4.84
143 144 0.454285 CCGTTTAGGTCGACGCGTTA 60.454 55.000 15.53 1.18 37.91 3.18
144 145 0.903187 CGTTTAGGTCGACGCGTTAG 59.097 55.000 15.53 11.61 32.11 2.34
145 146 0.637236 GTTTAGGTCGACGCGTTAGC 59.363 55.000 15.53 14.93 40.74 3.09
146 147 0.523072 TTTAGGTCGACGCGTTAGCT 59.477 50.000 24.25 24.25 42.32 3.32
147 148 0.179181 TTAGGTCGACGCGTTAGCTG 60.179 55.000 27.24 12.08 42.32 4.24
148 149 1.020861 TAGGTCGACGCGTTAGCTGA 61.021 55.000 27.24 13.84 42.32 4.26
149 150 1.226603 GGTCGACGCGTTAGCTGAT 60.227 57.895 15.53 0.00 42.32 2.90
150 151 0.028505 GGTCGACGCGTTAGCTGATA 59.971 55.000 15.53 0.00 42.32 2.15
151 152 1.110876 GTCGACGCGTTAGCTGATAC 58.889 55.000 15.53 0.96 42.32 2.24
152 153 0.315625 TCGACGCGTTAGCTGATACG 60.316 55.000 15.53 9.24 42.32 3.06
153 154 0.315625 CGACGCGTTAGCTGATACGA 60.316 55.000 15.53 0.00 42.32 3.43
154 155 1.659491 CGACGCGTTAGCTGATACGAT 60.659 52.381 15.53 7.93 42.32 3.73
155 156 1.709203 GACGCGTTAGCTGATACGATG 59.291 52.381 15.53 12.68 42.32 3.84
156 157 1.332686 ACGCGTTAGCTGATACGATGA 59.667 47.619 5.58 0.00 42.32 2.92
157 158 2.031069 ACGCGTTAGCTGATACGATGAT 60.031 45.455 5.58 1.69 42.32 2.45
158 159 3.187842 ACGCGTTAGCTGATACGATGATA 59.812 43.478 5.58 0.00 42.32 2.15
159 160 3.538782 CGCGTTAGCTGATACGATGATAC 59.461 47.826 18.17 2.80 42.32 2.24
160 161 4.669453 CGCGTTAGCTGATACGATGATACT 60.669 45.833 18.17 0.00 42.32 2.12
161 162 4.555360 GCGTTAGCTGATACGATGATACTG 59.445 45.833 18.17 0.00 40.03 2.74
162 163 5.617087 GCGTTAGCTGATACGATGATACTGA 60.617 44.000 18.17 0.00 40.03 3.41
163 164 6.547283 CGTTAGCTGATACGATGATACTGAT 58.453 40.000 11.05 0.00 40.03 2.90
164 165 7.024171 CGTTAGCTGATACGATGATACTGATT 58.976 38.462 11.05 0.00 40.03 2.57
165 166 7.539022 CGTTAGCTGATACGATGATACTGATTT 59.461 37.037 11.05 0.00 40.03 2.17
166 167 8.642885 GTTAGCTGATACGATGATACTGATTTG 58.357 37.037 0.00 0.00 0.00 2.32
167 168 6.753180 AGCTGATACGATGATACTGATTTGT 58.247 36.000 0.00 0.00 0.00 2.83
168 169 7.212976 AGCTGATACGATGATACTGATTTGTT 58.787 34.615 0.00 0.00 0.00 2.83
169 170 8.360390 AGCTGATACGATGATACTGATTTGTTA 58.640 33.333 0.00 0.00 0.00 2.41
170 171 9.144747 GCTGATACGATGATACTGATTTGTTAT 57.855 33.333 0.00 0.00 0.00 1.89
258 266 8.095792 TGATGAATGTTGATTTGTTATTTGCCT 58.904 29.630 0.00 0.00 0.00 4.75
293 301 1.268743 GCATTAGCTGCCGTTGGATTC 60.269 52.381 0.00 0.00 45.66 2.52
294 302 2.016318 CATTAGCTGCCGTTGGATTCA 58.984 47.619 0.00 0.00 0.00 2.57
295 303 1.737838 TTAGCTGCCGTTGGATTCAG 58.262 50.000 0.00 0.00 0.00 3.02
296 304 0.107703 TAGCTGCCGTTGGATTCAGG 60.108 55.000 0.00 0.00 0.00 3.86
297 305 1.675641 GCTGCCGTTGGATTCAGGT 60.676 57.895 0.00 0.00 0.00 4.00
298 306 1.926511 GCTGCCGTTGGATTCAGGTG 61.927 60.000 0.00 0.00 0.00 4.00
373 381 4.324267 GTTGTCCACCAAACACTAGCTAT 58.676 43.478 0.00 0.00 34.07 2.97
374 382 4.634012 TGTCCACCAAACACTAGCTATT 57.366 40.909 0.00 0.00 0.00 1.73
375 383 5.748670 TGTCCACCAAACACTAGCTATTA 57.251 39.130 0.00 0.00 0.00 0.98
387 395 5.535406 ACACTAGCTATTATACTCGCTGGTT 59.465 40.000 3.48 0.00 41.34 3.67
388 396 6.087522 CACTAGCTATTATACTCGCTGGTTC 58.912 44.000 3.48 0.00 41.34 3.62
409 417 9.354673 TGGTTCTGAGAAATTTACTCAAATTCT 57.645 29.630 16.14 0.00 42.29 2.40
456 464 0.467384 ATCGGGCCTTGATCTGTGAG 59.533 55.000 0.84 0.00 0.00 3.51
701 709 1.137086 CTACTGGCACTGGATTAGCGT 59.863 52.381 0.00 0.00 0.00 5.07
711 719 5.612709 GCACTGGATTAGCGTCGATTAATTC 60.613 44.000 0.00 0.00 0.00 2.17
713 721 5.209818 TGGATTAGCGTCGATTAATTCCT 57.790 39.130 0.00 0.00 0.00 3.36
714 722 5.227908 TGGATTAGCGTCGATTAATTCCTC 58.772 41.667 0.00 0.00 0.00 3.71
715 723 5.010719 TGGATTAGCGTCGATTAATTCCTCT 59.989 40.000 0.00 0.00 0.00 3.69
719 727 5.470845 AGCGTCGATTAATTCCTCTTTTG 57.529 39.130 0.00 0.00 0.00 2.44
720 728 4.935808 AGCGTCGATTAATTCCTCTTTTGT 59.064 37.500 0.00 0.00 0.00 2.83
721 729 5.411669 AGCGTCGATTAATTCCTCTTTTGTT 59.588 36.000 0.00 0.00 0.00 2.83
722 730 5.733109 GCGTCGATTAATTCCTCTTTTGTTC 59.267 40.000 0.00 0.00 0.00 3.18
773 786 4.755123 CGAACTGTTCTAGGGTGTTGATTT 59.245 41.667 17.60 0.00 0.00 2.17
780 793 7.038659 TGTTCTAGGGTGTTGATTTGTTTTTG 58.961 34.615 0.00 0.00 0.00 2.44
802 821 0.883833 ATTCTTTCCTTGCTGTGGCG 59.116 50.000 0.00 0.00 42.25 5.69
838 869 9.189723 CAGAATCAAAACCTGAATCTTTCTTTC 57.810 33.333 0.00 0.00 40.78 2.62
839 870 8.078596 AGAATCAAAACCTGAATCTTTCTTTCG 58.921 33.333 0.00 0.00 40.78 3.46
840 871 6.693315 TCAAAACCTGAATCTTTCTTTCGT 57.307 33.333 0.00 0.00 0.00 3.85
841 872 7.095695 TCAAAACCTGAATCTTTCTTTCGTT 57.904 32.000 0.00 0.00 0.00 3.85
842 873 7.543756 TCAAAACCTGAATCTTTCTTTCGTTT 58.456 30.769 0.00 0.00 0.00 3.60
843 874 7.700656 TCAAAACCTGAATCTTTCTTTCGTTTC 59.299 33.333 0.00 0.00 0.00 2.78
844 875 5.690997 ACCTGAATCTTTCTTTCGTTTCC 57.309 39.130 0.00 0.00 0.00 3.13
845 876 4.519350 ACCTGAATCTTTCTTTCGTTTCCC 59.481 41.667 0.00 0.00 0.00 3.97
846 877 4.378459 CCTGAATCTTTCTTTCGTTTCCCG 60.378 45.833 0.00 0.00 38.13 5.14
847 878 4.131596 TGAATCTTTCTTTCGTTTCCCGT 58.868 39.130 0.00 0.00 37.94 5.28
848 879 4.212636 TGAATCTTTCTTTCGTTTCCCGTC 59.787 41.667 0.00 0.00 37.94 4.79
849 880 2.486918 TCTTTCTTTCGTTTCCCGTCC 58.513 47.619 0.00 0.00 37.94 4.79
866 897 0.750249 TCCAGCTAATCGCCGATTGA 59.250 50.000 21.86 7.59 40.39 2.57
872 903 2.663879 GCTAATCGCCGATTGATTGCTG 60.664 50.000 21.86 4.99 36.74 4.41
877 908 1.274596 GCCGATTGATTGCTGCTTTG 58.725 50.000 0.00 0.00 0.00 2.77
890 921 4.522114 TGCTGCTTTGTGCCATACTAATA 58.478 39.130 0.00 0.00 42.00 0.98
891 922 4.946772 TGCTGCTTTGTGCCATACTAATAA 59.053 37.500 0.00 0.00 42.00 1.40
892 923 5.593909 TGCTGCTTTGTGCCATACTAATAAT 59.406 36.000 0.00 0.00 42.00 1.28
1440 1481 0.546598 AAGCCCCTGTTATTCCTCCG 59.453 55.000 0.00 0.00 0.00 4.63
1906 2987 5.048852 GGAACTCTGACTAGACGTTTACTGT 60.049 44.000 0.00 0.00 30.03 3.55
1911 2992 5.641209 TCTGACTAGACGTTTACTGTAGGTC 59.359 44.000 0.00 7.32 0.00 3.85
1955 3044 9.065871 GCTGTTGCAAGTTTTATTATGTAAGAG 57.934 33.333 0.00 0.00 39.41 2.85
2000 3105 6.316140 TGATGTGTAAACATAACTGCATCTCC 59.684 38.462 0.00 0.00 34.33 3.71
2096 3206 6.829298 AGATGCTTCAATCTGAATGTCTTGAT 59.171 34.615 2.07 0.00 35.59 2.57
2224 3520 3.195825 CCCTCCGTTCCATGATATAGGTC 59.804 52.174 0.00 0.00 0.00 3.85
2310 3651 7.452880 ACTGCATTCTGTTTATTTCAGCTTA 57.547 32.000 0.00 0.00 33.48 3.09
2311 3652 8.059798 ACTGCATTCTGTTTATTTCAGCTTAT 57.940 30.769 0.00 0.00 33.48 1.73
2585 3937 8.330466 TGGAAAAACACACATATTTCGTATCT 57.670 30.769 0.00 0.00 33.62 1.98
2596 3948 9.684448 CACATATTTCGTATCTCACTTCTATGT 57.316 33.333 0.00 0.00 0.00 2.29
2679 4039 4.228210 TGGATCTAACTCTGGCTTGGAAAT 59.772 41.667 0.00 0.00 0.00 2.17
2688 4048 5.934043 ACTCTGGCTTGGAAATTTTAAATGC 59.066 36.000 0.00 0.00 0.00 3.56
2725 4089 8.406297 GCTTACTCTTTTGATACATTAAAGGGG 58.594 37.037 0.00 0.00 34.43 4.79
2726 4090 6.775594 ACTCTTTTGATACATTAAAGGGGC 57.224 37.500 0.00 0.00 34.43 5.80
2727 4091 6.252995 ACTCTTTTGATACATTAAAGGGGCA 58.747 36.000 0.00 0.00 34.43 5.36
2741 4105 1.451936 GGGCAAGGCGGTATCATCT 59.548 57.895 0.00 0.00 0.00 2.90
2897 4262 2.023404 TGCCTGTCTAATACTCCCTCCA 60.023 50.000 0.00 0.00 0.00 3.86
2984 4351 2.143122 TGTTCACTCATTTCAGTCCGC 58.857 47.619 0.00 0.00 0.00 5.54
3107 7159 7.491682 ACAACCATATAAATTCATGAAGGCAC 58.508 34.615 14.54 0.00 0.00 5.01
3122 7175 2.040544 GCACCAGTTGTAGGCGCAT 61.041 57.895 10.83 3.98 34.41 4.73
3171 7224 0.250234 TGCATGACTCTGCCTGGTAC 59.750 55.000 0.00 0.00 41.58 3.34
3198 7251 4.384056 CCTCATTTGTCAGTTGTCACTCT 58.616 43.478 0.00 0.00 0.00 3.24
3619 8560 2.497273 GCTTATGGACCAGTTTGGCAAT 59.503 45.455 0.00 0.00 42.67 3.56
3661 8602 1.673808 GGAAGTACCTGACGGCGGAT 61.674 60.000 13.24 0.00 35.41 4.18
3828 8769 3.386237 AGCGAGGTGAGGCTGTCC 61.386 66.667 0.00 0.00 38.27 4.02
3892 8840 1.008194 CAGTCGGTCGGTTCGTTCA 60.008 57.895 0.00 0.00 0.00 3.18
4056 9010 7.130269 CGGAAACAGGACTTTTAAGTAGTTTG 58.870 38.462 17.48 8.32 39.88 2.93
4065 9019 5.296035 ACTTTTAAGTAGTTTGCAGTTCGCT 59.704 36.000 0.00 0.00 38.48 4.93
4066 9020 4.985044 TTAAGTAGTTTGCAGTTCGCTC 57.015 40.909 0.00 0.00 43.06 5.03
4118 9072 0.895530 CAGAACTTAGGGCGTCCTGA 59.104 55.000 21.58 10.33 44.61 3.86
4119 9073 1.275291 CAGAACTTAGGGCGTCCTGAA 59.725 52.381 21.58 8.28 44.61 3.02
4121 9075 2.168728 AGAACTTAGGGCGTCCTGAATC 59.831 50.000 21.58 11.92 44.61 2.52
4122 9076 0.831307 ACTTAGGGCGTCCTGAATCC 59.169 55.000 21.58 0.00 44.61 3.01
4123 9077 1.123928 CTTAGGGCGTCCTGAATCCT 58.876 55.000 21.58 0.00 44.61 3.24
4124 9078 0.830648 TTAGGGCGTCCTGAATCCTG 59.169 55.000 21.58 0.00 44.61 3.86
4125 9079 0.032515 TAGGGCGTCCTGAATCCTGA 60.033 55.000 21.58 0.00 44.61 3.86
4126 9080 0.692419 AGGGCGTCCTGAATCCTGAT 60.692 55.000 8.41 0.00 42.98 2.90
4127 9081 0.250081 GGGCGTCCTGAATCCTGATC 60.250 60.000 0.00 0.00 0.00 2.92
4136 9090 1.136891 TGAATCCTGATCGCGTGACAT 59.863 47.619 5.77 0.00 0.00 3.06
4173 9127 1.742880 CACTGATGCTGGGACCGTG 60.743 63.158 0.00 0.00 0.00 4.94
4240 9194 2.898840 CCGTGCCTAGCATGCTGG 60.899 66.667 30.42 26.70 43.41 4.85
4252 9206 1.001181 GCATGCTGGTCCATTGTTGTT 59.999 47.619 11.37 0.00 0.00 2.83
4255 9213 1.408340 TGCTGGTCCATTGTTGTTGTG 59.592 47.619 0.00 0.00 0.00 3.33
4281 9239 1.507140 TCCTGAGACAAGTGGTGGTT 58.493 50.000 0.00 0.00 0.00 3.67
4297 9256 0.747852 GGTTTTTGGTGGGAGCGAAA 59.252 50.000 0.00 0.00 0.00 3.46
4310 9269 1.725973 GCGAAAGGCAAACTCGTGC 60.726 57.895 0.00 0.00 44.14 5.34
4316 9275 2.551270 GCAAACTCGTGCTGTCGG 59.449 61.111 0.00 0.00 41.51 4.79
4380 9339 3.824810 GAGGCAGCCTCTTGATGC 58.175 61.111 31.54 6.24 46.41 3.91
4381 9340 1.077930 GAGGCAGCCTCTTGATGCA 60.078 57.895 31.54 0.00 46.41 3.96
4382 9341 0.679002 GAGGCAGCCTCTTGATGCAA 60.679 55.000 31.54 0.00 46.41 4.08
4383 9342 0.251474 AGGCAGCCTCTTGATGCAAA 60.251 50.000 8.70 0.00 41.78 3.68
4384 9343 0.604578 GGCAGCCTCTTGATGCAAAA 59.395 50.000 3.29 0.00 41.78 2.44
4385 9344 1.001181 GGCAGCCTCTTGATGCAAAAA 59.999 47.619 3.29 0.00 41.78 1.94
4408 9367 9.817809 AAAAACCTATTCTTTCAAGGAAAAGAC 57.182 29.630 0.00 0.00 43.18 3.01
4409 9368 7.526142 AACCTATTCTTTCAAGGAAAAGACC 57.474 36.000 0.00 0.00 43.18 3.85
4410 9369 6.853490 ACCTATTCTTTCAAGGAAAAGACCT 58.147 36.000 0.00 0.00 43.18 3.85
4412 9371 7.785028 ACCTATTCTTTCAAGGAAAAGACCTTT 59.215 33.333 0.00 0.00 46.61 3.11
4413 9372 9.297037 CCTATTCTTTCAAGGAAAAGACCTTTA 57.703 33.333 0.00 0.00 46.61 1.85
4422 9381 9.807921 TCAAGGAAAAGACCTTTATAATTCAGT 57.192 29.630 0.00 0.00 46.61 3.41
4423 9382 9.846248 CAAGGAAAAGACCTTTATAATTCAGTG 57.154 33.333 0.00 0.00 46.61 3.66
4424 9383 9.588096 AAGGAAAAGACCTTTATAATTCAGTGT 57.412 29.630 0.00 0.00 46.61 3.55
4444 9403 7.768807 AGTGTAGTTCTTCACTGACTATTCT 57.231 36.000 10.42 0.00 42.30 2.40
4445 9404 8.865420 AGTGTAGTTCTTCACTGACTATTCTA 57.135 34.615 10.42 0.00 42.30 2.10
4446 9405 8.952278 AGTGTAGTTCTTCACTGACTATTCTAG 58.048 37.037 10.42 0.00 42.30 2.43
4447 9406 8.732531 GTGTAGTTCTTCACTGACTATTCTAGT 58.267 37.037 3.05 0.00 38.18 2.57
4448 9407 8.731605 TGTAGTTCTTCACTGACTATTCTAGTG 58.268 37.037 0.00 0.00 42.34 2.74
4449 9408 7.768807 AGTTCTTCACTGACTATTCTAGTGT 57.231 36.000 0.00 0.00 41.82 3.55
4450 9409 8.865420 AGTTCTTCACTGACTATTCTAGTGTA 57.135 34.615 0.00 0.00 41.82 2.90
4451 9410 8.952278 AGTTCTTCACTGACTATTCTAGTGTAG 58.048 37.037 0.00 0.00 41.82 2.74
4452 9411 8.732531 GTTCTTCACTGACTATTCTAGTGTAGT 58.267 37.037 8.78 8.78 41.82 2.73
4453 9412 8.865420 TCTTCACTGACTATTCTAGTGTAGTT 57.135 34.615 0.00 0.00 41.82 2.24
4454 9413 9.298250 TCTTCACTGACTATTCTAGTGTAGTTT 57.702 33.333 0.00 0.00 41.82 2.66
4455 9414 9.347934 CTTCACTGACTATTCTAGTGTAGTTTG 57.652 37.037 9.91 8.74 41.82 2.93
4456 9415 8.631480 TCACTGACTATTCTAGTGTAGTTTGA 57.369 34.615 9.91 9.94 41.82 2.69
4457 9416 8.512956 TCACTGACTATTCTAGTGTAGTTTGAC 58.487 37.037 9.91 1.44 41.82 3.18
4458 9417 8.516234 CACTGACTATTCTAGTGTAGTTTGACT 58.484 37.037 9.91 0.00 39.59 3.41
4459 9418 8.732531 ACTGACTATTCTAGTGTAGTTTGACTC 58.267 37.037 9.91 0.68 39.59 3.36
4460 9419 8.631480 TGACTATTCTAGTGTAGTTTGACTCA 57.369 34.615 9.91 2.59 39.59 3.41
4461 9420 9.074576 TGACTATTCTAGTGTAGTTTGACTCAA 57.925 33.333 9.91 0.00 39.59 3.02
4462 9421 9.562583 GACTATTCTAGTGTAGTTTGACTCAAG 57.437 37.037 9.91 0.00 39.59 3.02
4463 9422 9.080097 ACTATTCTAGTGTAGTTTGACTCAAGT 57.920 33.333 4.62 0.00 37.69 3.16
4468 9427 8.663025 TCTAGTGTAGTTTGACTCAAGTATACG 58.337 37.037 0.00 0.00 0.00 3.06
4469 9428 7.211966 AGTGTAGTTTGACTCAAGTATACGT 57.788 36.000 0.00 0.00 0.00 3.57
4470 9429 7.655490 AGTGTAGTTTGACTCAAGTATACGTT 58.345 34.615 0.00 0.00 0.00 3.99
4471 9430 8.139989 AGTGTAGTTTGACTCAAGTATACGTTT 58.860 33.333 0.00 0.00 0.00 3.60
4472 9431 8.758715 GTGTAGTTTGACTCAAGTATACGTTTT 58.241 33.333 0.00 0.00 0.00 2.43
4473 9432 8.971321 TGTAGTTTGACTCAAGTATACGTTTTC 58.029 33.333 0.00 0.00 0.00 2.29
4474 9433 9.189723 GTAGTTTGACTCAAGTATACGTTTTCT 57.810 33.333 0.00 0.00 0.00 2.52
4475 9434 8.073355 AGTTTGACTCAAGTATACGTTTTCTG 57.927 34.615 0.00 0.00 0.00 3.02
4476 9435 7.924412 AGTTTGACTCAAGTATACGTTTTCTGA 59.076 33.333 0.00 0.00 0.00 3.27
4477 9436 7.633361 TTGACTCAAGTATACGTTTTCTGAC 57.367 36.000 0.00 0.00 0.00 3.51
4492 9451 2.884827 TCTGACGTCTCAGATTGCATG 58.115 47.619 17.92 0.00 46.79 4.06
4493 9452 1.326852 CTGACGTCTCAGATTGCATGC 59.673 52.381 17.92 11.82 46.32 4.06
4494 9453 1.338011 TGACGTCTCAGATTGCATGCA 60.338 47.619 18.46 18.46 0.00 3.96
4495 9454 1.938577 GACGTCTCAGATTGCATGCAT 59.061 47.619 23.37 11.80 0.00 3.96
4496 9455 2.353889 GACGTCTCAGATTGCATGCATT 59.646 45.455 23.37 18.66 0.00 3.56
4497 9456 2.751259 ACGTCTCAGATTGCATGCATTT 59.249 40.909 23.37 12.55 0.00 2.32
4498 9457 3.181503 ACGTCTCAGATTGCATGCATTTC 60.182 43.478 23.37 20.49 0.00 2.17
4499 9458 3.064958 CGTCTCAGATTGCATGCATTTCT 59.935 43.478 23.37 22.35 0.00 2.52
4500 9459 4.438336 CGTCTCAGATTGCATGCATTTCTT 60.438 41.667 23.37 8.82 0.00 2.52
4501 9460 5.220719 CGTCTCAGATTGCATGCATTTCTTA 60.221 40.000 23.37 16.21 0.00 2.10
4502 9461 6.558009 GTCTCAGATTGCATGCATTTCTTAA 58.442 36.000 23.37 14.75 0.00 1.85
4503 9462 7.031372 GTCTCAGATTGCATGCATTTCTTAAA 58.969 34.615 23.37 12.61 0.00 1.52
4504 9463 7.008992 GTCTCAGATTGCATGCATTTCTTAAAC 59.991 37.037 23.37 17.18 0.00 2.01
4505 9464 6.689554 TCAGATTGCATGCATTTCTTAAACA 58.310 32.000 23.37 1.97 0.00 2.83
4506 9465 6.809689 TCAGATTGCATGCATTTCTTAAACAG 59.190 34.615 23.37 12.92 0.00 3.16
4507 9466 6.588756 CAGATTGCATGCATTTCTTAAACAGT 59.411 34.615 23.37 0.76 0.00 3.55
4508 9467 7.756272 CAGATTGCATGCATTTCTTAAACAGTA 59.244 33.333 23.37 0.61 0.00 2.74
4509 9468 8.472413 AGATTGCATGCATTTCTTAAACAGTAT 58.528 29.630 23.37 6.31 0.00 2.12
4510 9469 9.090692 GATTGCATGCATTTCTTAAACAGTATT 57.909 29.630 23.37 0.00 0.00 1.89
4511 9470 7.815398 TGCATGCATTTCTTAAACAGTATTG 57.185 32.000 18.46 0.00 0.00 1.90
4512 9471 6.310956 TGCATGCATTTCTTAAACAGTATTGC 59.689 34.615 18.46 0.00 32.55 3.56
4513 9472 6.310956 GCATGCATTTCTTAAACAGTATTGCA 59.689 34.615 14.21 0.00 40.96 4.08
4514 9473 7.669098 CATGCATTTCTTAAACAGTATTGCAC 58.331 34.615 0.00 0.00 40.10 4.57
4515 9474 6.743110 TGCATTTCTTAAACAGTATTGCACA 58.257 32.000 0.00 0.00 35.46 4.57
4516 9475 6.640499 TGCATTTCTTAAACAGTATTGCACAC 59.360 34.615 0.00 0.00 35.46 3.82
4517 9476 6.863126 GCATTTCTTAAACAGTATTGCACACT 59.137 34.615 0.00 0.00 32.33 3.55
4518 9477 8.020819 GCATTTCTTAAACAGTATTGCACACTA 58.979 33.333 0.00 0.00 32.33 2.74
4519 9478 9.329913 CATTTCTTAAACAGTATTGCACACTAC 57.670 33.333 0.00 0.00 0.00 2.73
4520 9479 8.671384 TTTCTTAAACAGTATTGCACACTACT 57.329 30.769 0.00 0.00 0.00 2.57
4521 9480 9.767228 TTTCTTAAACAGTATTGCACACTACTA 57.233 29.630 0.00 0.00 0.00 1.82
4522 9481 9.767228 TTCTTAAACAGTATTGCACACTACTAA 57.233 29.630 0.00 0.00 0.00 2.24
4523 9482 9.199982 TCTTAAACAGTATTGCACACTACTAAC 57.800 33.333 0.00 0.00 0.00 2.34
4524 9483 9.204570 CTTAAACAGTATTGCACACTACTAACT 57.795 33.333 0.00 0.00 0.00 2.24
4527 9486 9.550406 AAACAGTATTGCACACTACTAACTAAA 57.450 29.630 0.00 0.00 0.00 1.85
4528 9487 9.550406 AACAGTATTGCACACTACTAACTAAAA 57.450 29.630 0.00 0.00 0.00 1.52
4529 9488 9.550406 ACAGTATTGCACACTACTAACTAAAAA 57.450 29.630 0.00 0.00 0.00 1.94
4634 9593 4.327885 CGGCTATCGCTTCTGGTC 57.672 61.111 0.00 0.00 36.09 4.02
4635 9594 1.658717 CGGCTATCGCTTCTGGTCG 60.659 63.158 0.00 0.00 36.09 4.79
4636 9595 1.437986 GGCTATCGCTTCTGGTCGT 59.562 57.895 0.00 0.00 36.09 4.34
4637 9596 0.595310 GGCTATCGCTTCTGGTCGTC 60.595 60.000 0.00 0.00 36.09 4.20
4638 9597 0.595310 GCTATCGCTTCTGGTCGTCC 60.595 60.000 0.00 0.00 0.00 4.79
4639 9598 0.317103 CTATCGCTTCTGGTCGTCCG 60.317 60.000 0.00 0.00 36.30 4.79
4640 9599 1.028330 TATCGCTTCTGGTCGTCCGT 61.028 55.000 0.00 0.00 36.30 4.69
4641 9600 2.267681 ATCGCTTCTGGTCGTCCGTC 62.268 60.000 0.00 0.00 36.30 4.79
4642 9601 2.649034 GCTTCTGGTCGTCCGTCA 59.351 61.111 0.00 0.00 36.30 4.35
4643 9602 1.215647 GCTTCTGGTCGTCCGTCAT 59.784 57.895 0.00 0.00 36.30 3.06
4644 9603 0.389948 GCTTCTGGTCGTCCGTCATT 60.390 55.000 0.00 0.00 36.30 2.57
4645 9604 1.135199 GCTTCTGGTCGTCCGTCATTA 60.135 52.381 0.00 0.00 36.30 1.90
4646 9605 2.673043 GCTTCTGGTCGTCCGTCATTAA 60.673 50.000 0.00 0.00 36.30 1.40
4647 9606 3.581755 CTTCTGGTCGTCCGTCATTAAA 58.418 45.455 0.00 0.00 36.30 1.52
4648 9607 3.663995 TCTGGTCGTCCGTCATTAAAA 57.336 42.857 0.00 0.00 36.30 1.52
4649 9608 4.196626 TCTGGTCGTCCGTCATTAAAAT 57.803 40.909 0.00 0.00 36.30 1.82
4650 9609 4.571919 TCTGGTCGTCCGTCATTAAAATT 58.428 39.130 0.00 0.00 36.30 1.82
4651 9610 5.722263 TCTGGTCGTCCGTCATTAAAATTA 58.278 37.500 0.00 0.00 36.30 1.40
4652 9611 5.577945 TCTGGTCGTCCGTCATTAAAATTAC 59.422 40.000 0.00 0.00 36.30 1.89
4653 9612 4.630940 TGGTCGTCCGTCATTAAAATTACC 59.369 41.667 0.00 0.00 36.30 2.85
4654 9613 4.034394 GGTCGTCCGTCATTAAAATTACCC 59.966 45.833 0.00 0.00 0.00 3.69
4655 9614 4.872124 GTCGTCCGTCATTAAAATTACCCT 59.128 41.667 0.00 0.00 0.00 4.34
4656 9615 5.352293 GTCGTCCGTCATTAAAATTACCCTT 59.648 40.000 0.00 0.00 0.00 3.95
4657 9616 5.939296 TCGTCCGTCATTAAAATTACCCTTT 59.061 36.000 0.00 0.00 0.00 3.11
4658 9617 7.064490 GTCGTCCGTCATTAAAATTACCCTTTA 59.936 37.037 0.00 0.00 0.00 1.85
4659 9618 7.605691 TCGTCCGTCATTAAAATTACCCTTTAA 59.394 33.333 0.00 0.00 33.87 1.52
4660 9619 7.906527 CGTCCGTCATTAAAATTACCCTTTAAG 59.093 37.037 0.00 0.00 33.10 1.85
4661 9620 8.733458 GTCCGTCATTAAAATTACCCTTTAAGT 58.267 33.333 0.00 0.00 33.10 2.24
4662 9621 9.299465 TCCGTCATTAAAATTACCCTTTAAGTT 57.701 29.630 0.00 0.00 33.10 2.66
4663 9622 9.917129 CCGTCATTAAAATTACCCTTTAAGTTT 57.083 29.630 0.00 0.00 33.10 2.66
4677 9636 8.990203 ACCCTTTAAGTTTGTAAAAATTACCCA 58.010 29.630 0.00 0.00 0.00 4.51
4678 9637 9.263538 CCCTTTAAGTTTGTAAAAATTACCCAC 57.736 33.333 0.00 0.00 0.00 4.61
4679 9638 9.263538 CCTTTAAGTTTGTAAAAATTACCCACC 57.736 33.333 0.00 0.00 0.00 4.61
4680 9639 9.819267 CTTTAAGTTTGTAAAAATTACCCACCA 57.181 29.630 0.00 0.00 0.00 4.17
4683 9642 8.669946 AAGTTTGTAAAAATTACCCACCAATG 57.330 30.769 0.00 0.00 0.00 2.82
4684 9643 6.708502 AGTTTGTAAAAATTACCCACCAATGC 59.291 34.615 0.00 0.00 0.00 3.56
4685 9644 5.153950 TGTAAAAATTACCCACCAATGCC 57.846 39.130 0.00 0.00 0.00 4.40
4686 9645 4.593206 TGTAAAAATTACCCACCAATGCCA 59.407 37.500 0.00 0.00 0.00 4.92
4687 9646 4.925390 AAAAATTACCCACCAATGCCAT 57.075 36.364 0.00 0.00 0.00 4.40
4688 9647 4.925390 AAAATTACCCACCAATGCCATT 57.075 36.364 0.00 0.00 0.00 3.16
4689 9648 4.486125 AAATTACCCACCAATGCCATTC 57.514 40.909 0.00 0.00 0.00 2.67
4690 9649 2.612285 TTACCCACCAATGCCATTCA 57.388 45.000 0.00 0.00 0.00 2.57
4691 9650 2.844654 TACCCACCAATGCCATTCAT 57.155 45.000 0.00 0.00 36.87 2.57
4692 9651 2.844654 ACCCACCAATGCCATTCATA 57.155 45.000 0.00 0.00 34.33 2.15
4693 9652 3.113191 ACCCACCAATGCCATTCATAA 57.887 42.857 0.00 0.00 34.33 1.90
4694 9653 3.033184 ACCCACCAATGCCATTCATAAG 58.967 45.455 0.00 0.00 34.33 1.73
4695 9654 3.033184 CCCACCAATGCCATTCATAAGT 58.967 45.455 0.00 0.00 34.33 2.24
4696 9655 3.181473 CCCACCAATGCCATTCATAAGTG 60.181 47.826 0.00 0.00 37.74 3.16
4697 9656 3.181473 CCACCAATGCCATTCATAAGTGG 60.181 47.826 10.08 10.08 44.78 4.00
4698 9657 3.033184 ACCAATGCCATTCATAAGTGGG 58.967 45.455 0.00 0.00 35.73 4.61
4699 9658 3.298619 CCAATGCCATTCATAAGTGGGA 58.701 45.455 0.00 0.00 40.24 4.37
4700 9659 3.705579 CCAATGCCATTCATAAGTGGGAA 59.294 43.478 0.00 0.00 39.36 3.97
4701 9660 4.161942 CCAATGCCATTCATAAGTGGGAAA 59.838 41.667 0.00 0.00 39.36 3.13
4702 9661 5.338219 CCAATGCCATTCATAAGTGGGAAAA 60.338 40.000 0.00 0.00 39.36 2.29
4703 9662 4.799564 TGCCATTCATAAGTGGGAAAAC 57.200 40.909 0.00 0.00 36.00 2.43
4704 9663 3.192422 TGCCATTCATAAGTGGGAAAACG 59.808 43.478 0.00 0.00 36.00 3.60
4705 9664 3.442273 GCCATTCATAAGTGGGAAAACGA 59.558 43.478 0.00 0.00 36.00 3.85
4706 9665 4.097892 GCCATTCATAAGTGGGAAAACGAT 59.902 41.667 0.00 0.00 36.00 3.73
4707 9666 5.394115 GCCATTCATAAGTGGGAAAACGATT 60.394 40.000 0.00 0.00 36.00 3.34
4708 9667 6.265577 CCATTCATAAGTGGGAAAACGATTC 58.734 40.000 0.00 0.00 0.00 2.52
4709 9668 6.127758 CCATTCATAAGTGGGAAAACGATTCA 60.128 38.462 0.00 0.00 0.00 2.57
4710 9669 6.885952 TTCATAAGTGGGAAAACGATTCAA 57.114 33.333 0.00 0.00 0.00 2.69
4711 9670 6.494893 TCATAAGTGGGAAAACGATTCAAG 57.505 37.500 0.00 0.00 0.00 3.02
4712 9671 6.001460 TCATAAGTGGGAAAACGATTCAAGT 58.999 36.000 0.00 0.00 0.00 3.16
4713 9672 6.488683 TCATAAGTGGGAAAACGATTCAAGTT 59.511 34.615 0.00 0.00 0.00 2.66
4714 9673 5.592104 AAGTGGGAAAACGATTCAAGTTT 57.408 34.783 0.00 0.00 42.86 2.66
4721 9680 3.891056 AACGATTCAAGTTTTCGGACC 57.109 42.857 0.00 0.00 37.20 4.46
4722 9681 2.841215 ACGATTCAAGTTTTCGGACCA 58.159 42.857 0.00 0.00 37.20 4.02
4723 9682 3.207778 ACGATTCAAGTTTTCGGACCAA 58.792 40.909 0.00 0.00 37.20 3.67
4724 9683 3.628487 ACGATTCAAGTTTTCGGACCAAA 59.372 39.130 0.00 0.00 37.20 3.28
4725 9684 4.096682 ACGATTCAAGTTTTCGGACCAAAA 59.903 37.500 0.00 0.00 37.20 2.44
4726 9685 5.038033 CGATTCAAGTTTTCGGACCAAAAA 58.962 37.500 0.00 0.00 0.00 1.94
4727 9686 5.689961 CGATTCAAGTTTTCGGACCAAAAAT 59.310 36.000 0.00 0.00 0.00 1.82
4728 9687 6.200097 CGATTCAAGTTTTCGGACCAAAAATT 59.800 34.615 0.00 2.10 34.69 1.82
4729 9688 7.380065 CGATTCAAGTTTTCGGACCAAAAATTA 59.620 33.333 11.69 2.91 33.09 1.40
4730 9689 7.758613 TTCAAGTTTTCGGACCAAAAATTAC 57.241 32.000 11.69 1.10 33.09 1.89
4731 9690 6.274579 TCAAGTTTTCGGACCAAAAATTACC 58.725 36.000 11.69 0.00 33.09 2.85
4732 9691 4.862350 AGTTTTCGGACCAAAAATTACCG 58.138 39.130 0.00 0.00 44.09 4.02
4733 9692 2.993449 TTCGGACCAAAAATTACCGC 57.007 45.000 0.00 0.00 42.73 5.68
4734 9693 1.166989 TCGGACCAAAAATTACCGCC 58.833 50.000 0.00 0.00 42.73 6.13
4735 9694 1.170442 CGGACCAAAAATTACCGCCT 58.830 50.000 0.00 0.00 37.32 5.52
4736 9695 1.131693 CGGACCAAAAATTACCGCCTC 59.868 52.381 0.00 0.00 37.32 4.70
4737 9696 2.443416 GGACCAAAAATTACCGCCTCT 58.557 47.619 0.00 0.00 0.00 3.69
4738 9697 2.823747 GGACCAAAAATTACCGCCTCTT 59.176 45.455 0.00 0.00 0.00 2.85
4739 9698 3.257375 GGACCAAAAATTACCGCCTCTTT 59.743 43.478 0.00 0.00 0.00 2.52
4740 9699 4.482386 GACCAAAAATTACCGCCTCTTTC 58.518 43.478 0.00 0.00 0.00 2.62
4741 9700 3.057806 ACCAAAAATTACCGCCTCTTTCG 60.058 43.478 0.00 0.00 0.00 3.46
4742 9701 3.057806 CCAAAAATTACCGCCTCTTTCGT 60.058 43.478 0.00 0.00 0.00 3.85
4743 9702 3.824414 AAAATTACCGCCTCTTTCGTG 57.176 42.857 0.00 0.00 0.00 4.35
4744 9703 1.734163 AATTACCGCCTCTTTCGTGG 58.266 50.000 0.00 0.00 36.92 4.94
4745 9704 0.611714 ATTACCGCCTCTTTCGTGGT 59.388 50.000 0.00 0.00 45.86 4.16
4746 9705 0.037975 TTACCGCCTCTTTCGTGGTC 60.038 55.000 0.00 0.00 43.05 4.02
4747 9706 1.180456 TACCGCCTCTTTCGTGGTCA 61.180 55.000 0.00 0.00 43.05 4.02
4748 9707 1.079127 CCGCCTCTTTCGTGGTCAT 60.079 57.895 0.00 0.00 0.00 3.06
4749 9708 0.174845 CCGCCTCTTTCGTGGTCATA 59.825 55.000 0.00 0.00 0.00 2.15
4750 9709 1.202533 CCGCCTCTTTCGTGGTCATAT 60.203 52.381 0.00 0.00 0.00 1.78
4751 9710 2.035449 CCGCCTCTTTCGTGGTCATATA 59.965 50.000 0.00 0.00 0.00 0.86
4752 9711 3.050619 CGCCTCTTTCGTGGTCATATAC 58.949 50.000 0.00 0.00 0.00 1.47
4753 9712 3.050619 GCCTCTTTCGTGGTCATATACG 58.949 50.000 0.00 0.00 41.38 3.06
4754 9713 3.639538 CCTCTTTCGTGGTCATATACGG 58.360 50.000 0.00 0.00 40.48 4.02
4755 9714 3.552273 CCTCTTTCGTGGTCATATACGGG 60.552 52.174 0.00 0.00 40.48 5.28
4756 9715 2.132762 CTTTCGTGGTCATATACGGGC 58.867 52.381 0.00 0.00 40.48 6.13
4757 9716 0.031043 TTCGTGGTCATATACGGGCG 59.969 55.000 0.00 0.00 40.48 6.13
4758 9717 2.019951 CGTGGTCATATACGGGCGC 61.020 63.158 0.00 0.00 36.71 6.53
4759 9718 2.019951 GTGGTCATATACGGGCGCG 61.020 63.158 22.69 22.69 0.00 6.86
4760 9719 2.194889 TGGTCATATACGGGCGCGA 61.195 57.895 30.98 13.74 0.00 5.87
4761 9720 1.731969 GGTCATATACGGGCGCGAC 60.732 63.158 30.98 6.99 0.00 5.19
4762 9721 1.008194 GTCATATACGGGCGCGACA 60.008 57.895 30.98 16.90 0.00 4.35
4763 9722 0.595567 GTCATATACGGGCGCGACAA 60.596 55.000 30.98 14.62 0.00 3.18
4764 9723 0.318360 TCATATACGGGCGCGACAAG 60.318 55.000 30.98 10.24 0.00 3.16
4765 9724 0.318360 CATATACGGGCGCGACAAGA 60.318 55.000 30.98 12.05 0.00 3.02
4766 9725 0.386476 ATATACGGGCGCGACAAGAA 59.614 50.000 30.98 8.83 0.00 2.52
4767 9726 0.386476 TATACGGGCGCGACAAGAAT 59.614 50.000 30.98 13.95 0.00 2.40
4768 9727 0.386476 ATACGGGCGCGACAAGAATA 59.614 50.000 30.98 10.03 0.00 1.75
4769 9728 0.173029 TACGGGCGCGACAAGAATAA 59.827 50.000 30.98 0.46 0.00 1.40
4770 9729 1.082117 ACGGGCGCGACAAGAATAAG 61.082 55.000 30.98 0.00 0.00 1.73
4771 9730 1.082117 CGGGCGCGACAAGAATAAGT 61.082 55.000 19.65 0.00 0.00 2.24
4772 9731 1.084289 GGGCGCGACAAGAATAAGTT 58.916 50.000 17.00 0.00 0.00 2.66
4773 9732 2.273557 GGGCGCGACAAGAATAAGTTA 58.726 47.619 17.00 0.00 0.00 2.24
4774 9733 2.030091 GGGCGCGACAAGAATAAGTTAC 59.970 50.000 17.00 0.00 0.00 2.50
4775 9734 2.669434 GGCGCGACAAGAATAAGTTACA 59.331 45.455 12.10 0.00 0.00 2.41
4776 9735 3.241995 GGCGCGACAAGAATAAGTTACAG 60.242 47.826 12.10 0.00 0.00 2.74
4777 9736 3.611113 GCGCGACAAGAATAAGTTACAGA 59.389 43.478 12.10 0.00 0.00 3.41
4778 9737 4.090930 GCGCGACAAGAATAAGTTACAGAA 59.909 41.667 12.10 0.00 0.00 3.02
4779 9738 5.220416 GCGCGACAAGAATAAGTTACAGAAT 60.220 40.000 12.10 0.00 0.00 2.40
4780 9739 6.178507 CGCGACAAGAATAAGTTACAGAATG 58.821 40.000 0.00 0.00 46.00 2.67
4781 9740 6.034577 CGCGACAAGAATAAGTTACAGAATGA 59.965 38.462 0.00 0.00 39.69 2.57
4782 9741 7.254117 CGCGACAAGAATAAGTTACAGAATGAT 60.254 37.037 0.00 0.00 39.69 2.45
4783 9742 9.031360 GCGACAAGAATAAGTTACAGAATGATA 57.969 33.333 0.00 0.00 39.69 2.15
4789 9748 9.050601 AGAATAAGTTACAGAATGATAAGCAGC 57.949 33.333 0.00 0.00 39.69 5.25
4790 9749 8.737168 AATAAGTTACAGAATGATAAGCAGCA 57.263 30.769 0.00 0.00 39.69 4.41
4791 9750 6.674694 AAGTTACAGAATGATAAGCAGCAG 57.325 37.500 0.00 0.00 39.69 4.24
4792 9751 5.982356 AGTTACAGAATGATAAGCAGCAGA 58.018 37.500 0.00 0.00 39.69 4.26
4793 9752 6.047870 AGTTACAGAATGATAAGCAGCAGAG 58.952 40.000 0.00 0.00 39.69 3.35
4794 9753 4.484537 ACAGAATGATAAGCAGCAGAGT 57.515 40.909 0.00 0.00 39.69 3.24
4795 9754 4.190001 ACAGAATGATAAGCAGCAGAGTG 58.810 43.478 0.00 0.00 39.69 3.51
4796 9755 3.560481 CAGAATGATAAGCAGCAGAGTGG 59.440 47.826 0.00 0.00 39.69 4.00
4797 9756 3.199508 AGAATGATAAGCAGCAGAGTGGT 59.800 43.478 0.00 0.00 0.00 4.16
4798 9757 3.641434 ATGATAAGCAGCAGAGTGGTT 57.359 42.857 0.00 0.00 41.04 3.67
4799 9758 2.703416 TGATAAGCAGCAGAGTGGTTG 58.297 47.619 0.00 0.00 38.57 3.77
4800 9759 2.012673 GATAAGCAGCAGAGTGGTTGG 58.987 52.381 0.00 0.00 38.57 3.77
4801 9760 0.764890 TAAGCAGCAGAGTGGTTGGT 59.235 50.000 0.00 0.00 38.57 3.67
4802 9761 0.106519 AAGCAGCAGAGTGGTTGGTT 60.107 50.000 0.00 0.00 36.79 3.67
4803 9762 0.820891 AGCAGCAGAGTGGTTGGTTG 60.821 55.000 0.00 0.00 0.00 3.77
4804 9763 0.819259 GCAGCAGAGTGGTTGGTTGA 60.819 55.000 0.00 0.00 0.00 3.18
4805 9764 1.901591 CAGCAGAGTGGTTGGTTGAT 58.098 50.000 0.00 0.00 0.00 2.57
4806 9765 1.808945 CAGCAGAGTGGTTGGTTGATC 59.191 52.381 0.00 0.00 0.00 2.92
4807 9766 1.701847 AGCAGAGTGGTTGGTTGATCT 59.298 47.619 0.00 0.00 0.00 2.75
4808 9767 2.079925 GCAGAGTGGTTGGTTGATCTC 58.920 52.381 0.00 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.491234 TTTCATGTCCGCACGTAAATTT 57.509 36.364 0.00 0.00 0.00 1.82
1 2 4.411327 CATTTCATGTCCGCACGTAAATT 58.589 39.130 0.00 0.00 0.00 1.82
2 3 3.181501 CCATTTCATGTCCGCACGTAAAT 60.182 43.478 0.00 0.00 0.00 1.40
3 4 2.160615 CCATTTCATGTCCGCACGTAAA 59.839 45.455 0.00 0.00 0.00 2.01
4 5 1.735018 CCATTTCATGTCCGCACGTAA 59.265 47.619 0.00 0.00 0.00 3.18
5 6 1.364721 CCATTTCATGTCCGCACGTA 58.635 50.000 0.00 0.00 0.00 3.57
6 7 1.305219 CCCATTTCATGTCCGCACGT 61.305 55.000 0.00 0.00 0.00 4.49
7 8 1.305219 ACCCATTTCATGTCCGCACG 61.305 55.000 0.00 0.00 0.00 5.34
8 9 0.451783 GACCCATTTCATGTCCGCAC 59.548 55.000 0.00 0.00 0.00 5.34
9 10 0.037447 TGACCCATTTCATGTCCGCA 59.963 50.000 0.00 0.00 0.00 5.69
10 11 1.334869 GATGACCCATTTCATGTCCGC 59.665 52.381 0.00 0.00 36.30 5.54
11 12 1.599071 CGATGACCCATTTCATGTCCG 59.401 52.381 0.00 0.00 36.30 4.79
12 13 1.334869 GCGATGACCCATTTCATGTCC 59.665 52.381 0.00 0.00 36.30 4.02
13 14 1.334869 GGCGATGACCCATTTCATGTC 59.665 52.381 0.00 0.00 36.30 3.06
14 15 1.340893 TGGCGATGACCCATTTCATGT 60.341 47.619 0.00 0.00 36.30 3.21
15 16 1.391577 TGGCGATGACCCATTTCATG 58.608 50.000 0.00 0.00 36.30 3.07
16 17 2.369983 ATGGCGATGACCCATTTCAT 57.630 45.000 0.00 0.00 40.06 2.57
17 18 3.901087 ATGGCGATGACCCATTTCA 57.099 47.368 0.00 0.00 40.06 2.69
21 22 0.466189 GTCCAATGGCGATGACCCAT 60.466 55.000 0.00 0.00 44.75 4.00
22 23 1.077787 GTCCAATGGCGATGACCCA 60.078 57.895 0.00 0.00 36.66 4.51
23 24 2.180204 CGTCCAATGGCGATGACCC 61.180 63.158 9.85 0.00 0.00 4.46
24 25 2.823829 GCGTCCAATGGCGATGACC 61.824 63.158 17.58 0.00 0.00 4.02
25 26 2.106074 TGCGTCCAATGGCGATGAC 61.106 57.895 17.58 0.00 0.00 3.06
26 27 2.106074 GTGCGTCCAATGGCGATGA 61.106 57.895 17.58 1.01 0.00 2.92
27 28 2.404789 GTGCGTCCAATGGCGATG 59.595 61.111 17.58 0.00 0.00 3.84
28 29 2.824041 GGTGCGTCCAATGGCGAT 60.824 61.111 17.58 0.00 35.97 4.58
29 30 3.950794 GAGGTGCGTCCAATGGCGA 62.951 63.158 17.58 3.22 39.02 5.54
30 31 3.499737 GAGGTGCGTCCAATGGCG 61.500 66.667 10.84 10.84 39.02 5.69
31 32 2.252072 TAGGAGGTGCGTCCAATGGC 62.252 60.000 12.64 0.00 39.34 4.40
32 33 0.462047 GTAGGAGGTGCGTCCAATGG 60.462 60.000 12.64 0.00 39.34 3.16
33 34 0.537188 AGTAGGAGGTGCGTCCAATG 59.463 55.000 12.64 0.00 39.34 2.82
34 35 0.824759 GAGTAGGAGGTGCGTCCAAT 59.175 55.000 12.64 0.00 39.34 3.16
35 36 0.541063 TGAGTAGGAGGTGCGTCCAA 60.541 55.000 12.64 0.00 39.34 3.53
36 37 0.541063 TTGAGTAGGAGGTGCGTCCA 60.541 55.000 12.64 0.00 39.34 4.02
37 38 0.606604 TTTGAGTAGGAGGTGCGTCC 59.393 55.000 2.94 2.94 36.79 4.79
38 39 2.166664 AGATTTGAGTAGGAGGTGCGTC 59.833 50.000 0.00 0.00 0.00 5.19
39 40 2.180276 AGATTTGAGTAGGAGGTGCGT 58.820 47.619 0.00 0.00 0.00 5.24
40 41 2.969628 AGATTTGAGTAGGAGGTGCG 57.030 50.000 0.00 0.00 0.00 5.34
41 42 5.599999 TCTAAGATTTGAGTAGGAGGTGC 57.400 43.478 0.00 0.00 0.00 5.01
42 43 7.044798 CCTTTCTAAGATTTGAGTAGGAGGTG 58.955 42.308 0.00 0.00 0.00 4.00
43 44 6.157123 CCCTTTCTAAGATTTGAGTAGGAGGT 59.843 42.308 0.00 0.00 0.00 3.85
44 45 6.587273 CCCTTTCTAAGATTTGAGTAGGAGG 58.413 44.000 0.00 0.00 0.00 4.30
45 46 6.052360 GCCCTTTCTAAGATTTGAGTAGGAG 58.948 44.000 0.00 0.00 0.00 3.69
46 47 5.487488 TGCCCTTTCTAAGATTTGAGTAGGA 59.513 40.000 0.00 0.00 0.00 2.94
47 48 5.745227 TGCCCTTTCTAAGATTTGAGTAGG 58.255 41.667 0.00 0.00 0.00 3.18
48 49 6.536941 GTCTGCCCTTTCTAAGATTTGAGTAG 59.463 42.308 0.00 0.00 0.00 2.57
49 50 6.407202 GTCTGCCCTTTCTAAGATTTGAGTA 58.593 40.000 0.00 0.00 0.00 2.59
50 51 5.249420 GTCTGCCCTTTCTAAGATTTGAGT 58.751 41.667 0.00 0.00 0.00 3.41
51 52 4.331168 CGTCTGCCCTTTCTAAGATTTGAG 59.669 45.833 0.00 0.00 0.00 3.02
52 53 4.253685 CGTCTGCCCTTTCTAAGATTTGA 58.746 43.478 0.00 0.00 0.00 2.69
53 54 3.181506 GCGTCTGCCCTTTCTAAGATTTG 60.182 47.826 0.00 0.00 33.98 2.32
54 55 3.010420 GCGTCTGCCCTTTCTAAGATTT 58.990 45.455 0.00 0.00 33.98 2.17
55 56 2.633488 GCGTCTGCCCTTTCTAAGATT 58.367 47.619 0.00 0.00 33.98 2.40
56 57 2.317530 GCGTCTGCCCTTTCTAAGAT 57.682 50.000 0.00 0.00 33.98 2.40
57 58 3.834732 GCGTCTGCCCTTTCTAAGA 57.165 52.632 0.00 0.00 33.98 2.10
81 82 1.590792 CCGTTTAGATCGGTCGCCC 60.591 63.158 0.00 0.00 42.62 6.13
82 83 0.869028 GTCCGTTTAGATCGGTCGCC 60.869 60.000 4.36 0.00 46.86 5.54
83 84 0.179156 TGTCCGTTTAGATCGGTCGC 60.179 55.000 4.36 0.00 46.86 5.19
84 85 2.267188 TTGTCCGTTTAGATCGGTCG 57.733 50.000 4.36 0.00 46.86 4.79
85 86 4.996062 TTTTTGTCCGTTTAGATCGGTC 57.004 40.909 4.36 0.00 46.86 4.79
103 104 4.849383 CGGACGACGCTTTTATTCATTTTT 59.151 37.500 0.00 0.00 34.82 1.94
104 105 4.399978 CGGACGACGCTTTTATTCATTTT 58.600 39.130 0.00 0.00 34.82 1.82
105 106 3.998522 CGGACGACGCTTTTATTCATTT 58.001 40.909 0.00 0.00 34.82 2.32
106 107 3.651562 CGGACGACGCTTTTATTCATT 57.348 42.857 0.00 0.00 34.82 2.57
122 123 2.148365 CGCGTCGACCTAAACGGAC 61.148 63.158 10.58 0.00 39.24 4.79
123 124 2.128853 AACGCGTCGACCTAAACGGA 62.129 55.000 14.44 0.00 39.24 4.69
124 125 0.454285 TAACGCGTCGACCTAAACGG 60.454 55.000 14.44 0.00 39.24 4.44
125 126 0.903187 CTAACGCGTCGACCTAAACG 59.097 55.000 14.44 8.81 41.68 3.60
126 127 0.637236 GCTAACGCGTCGACCTAAAC 59.363 55.000 14.44 0.00 0.00 2.01
127 128 0.523072 AGCTAACGCGTCGACCTAAA 59.477 50.000 14.44 0.00 42.32 1.85
128 129 0.179181 CAGCTAACGCGTCGACCTAA 60.179 55.000 14.44 0.00 42.32 2.69
129 130 1.020861 TCAGCTAACGCGTCGACCTA 61.021 55.000 14.44 0.00 42.32 3.08
130 131 1.654954 ATCAGCTAACGCGTCGACCT 61.655 55.000 14.44 3.81 42.32 3.85
131 132 0.028505 TATCAGCTAACGCGTCGACC 59.971 55.000 14.44 1.09 42.32 4.79
132 133 1.110876 GTATCAGCTAACGCGTCGAC 58.889 55.000 14.44 5.18 42.32 4.20
133 134 0.315625 CGTATCAGCTAACGCGTCGA 60.316 55.000 14.44 2.23 42.32 4.20
134 135 0.315625 TCGTATCAGCTAACGCGTCG 60.316 55.000 14.44 8.73 42.32 5.12
135 136 1.709203 CATCGTATCAGCTAACGCGTC 59.291 52.381 14.44 0.00 42.32 5.19
136 137 1.332686 TCATCGTATCAGCTAACGCGT 59.667 47.619 5.58 5.58 42.32 6.01
137 138 2.032414 TCATCGTATCAGCTAACGCG 57.968 50.000 3.53 3.53 42.32 6.01
138 139 4.555360 CAGTATCATCGTATCAGCTAACGC 59.445 45.833 9.80 0.00 38.94 4.84
139 140 5.928153 TCAGTATCATCGTATCAGCTAACG 58.072 41.667 8.66 8.66 40.40 3.18
140 141 8.642885 CAAATCAGTATCATCGTATCAGCTAAC 58.357 37.037 0.00 0.00 0.00 2.34
141 142 8.360390 ACAAATCAGTATCATCGTATCAGCTAA 58.640 33.333 0.00 0.00 0.00 3.09
142 143 7.886338 ACAAATCAGTATCATCGTATCAGCTA 58.114 34.615 0.00 0.00 0.00 3.32
143 144 6.753180 ACAAATCAGTATCATCGTATCAGCT 58.247 36.000 0.00 0.00 0.00 4.24
144 145 7.413475 AACAAATCAGTATCATCGTATCAGC 57.587 36.000 0.00 0.00 0.00 4.26
150 151 8.335356 CGGAAAATAACAAATCAGTATCATCGT 58.665 33.333 0.00 0.00 0.00 3.73
151 152 8.547894 TCGGAAAATAACAAATCAGTATCATCG 58.452 33.333 0.00 0.00 0.00 3.84
154 155 9.389755 TCATCGGAAAATAACAAATCAGTATCA 57.610 29.630 0.00 0.00 0.00 2.15
158 159 9.396022 AGTATCATCGGAAAATAACAAATCAGT 57.604 29.630 0.00 0.00 0.00 3.41
159 160 9.655769 CAGTATCATCGGAAAATAACAAATCAG 57.344 33.333 0.00 0.00 0.00 2.90
160 161 9.389755 TCAGTATCATCGGAAAATAACAAATCA 57.610 29.630 0.00 0.00 0.00 2.57
165 166 9.173021 ACAAATCAGTATCATCGGAAAATAACA 57.827 29.630 0.00 0.00 0.00 2.41
224 232 7.370383 ACAAATCAACATTCATCACAGTAACC 58.630 34.615 0.00 0.00 0.00 2.85
258 266 3.436015 GCTAATGCTCGACGGATACTCTA 59.564 47.826 0.00 0.00 36.03 2.43
293 301 2.111669 TGCTCACACCTGCACCTG 59.888 61.111 0.00 0.00 33.94 4.00
312 320 4.133820 TCTTTGTCCGCTCATGAGAAAAA 58.866 39.130 27.04 12.01 0.00 1.94
362 370 5.535406 ACCAGCGAGTATAATAGCTAGTGTT 59.465 40.000 7.48 0.00 37.94 3.32
364 372 5.630661 ACCAGCGAGTATAATAGCTAGTG 57.369 43.478 7.48 2.98 37.94 2.74
373 381 5.654603 TTTCTCAGAACCAGCGAGTATAA 57.345 39.130 0.00 0.00 0.00 0.98
374 382 5.854010 ATTTCTCAGAACCAGCGAGTATA 57.146 39.130 0.00 0.00 0.00 1.47
375 383 4.744795 ATTTCTCAGAACCAGCGAGTAT 57.255 40.909 0.00 0.00 0.00 2.12
409 417 4.566545 TCAATTTGCGAGCTTCTGAAAA 57.433 36.364 0.00 0.00 0.00 2.29
413 421 5.634896 ACTAATTCAATTTGCGAGCTTCTG 58.365 37.500 0.00 0.00 0.00 3.02
456 464 1.098050 GTGCACCATCACCTGAATCC 58.902 55.000 5.22 0.00 0.00 3.01
701 709 7.447238 ACCAAGAACAAAAGAGGAATTAATCGA 59.553 33.333 0.00 0.00 0.00 3.59
711 719 6.461092 GGTTTCCTTACCAAGAACAAAAGAGG 60.461 42.308 0.00 0.00 38.12 3.69
713 721 5.361571 GGGTTTCCTTACCAAGAACAAAAGA 59.638 40.000 0.00 0.00 40.09 2.52
714 722 5.362717 AGGGTTTCCTTACCAAGAACAAAAG 59.637 40.000 0.00 0.00 41.56 2.27
715 723 5.274015 AGGGTTTCCTTACCAAGAACAAAA 58.726 37.500 0.00 0.00 41.56 2.44
719 727 4.008330 GCTAGGGTTTCCTTACCAAGAAC 58.992 47.826 0.00 0.00 41.56 3.01
720 728 3.914435 AGCTAGGGTTTCCTTACCAAGAA 59.086 43.478 0.00 0.00 41.56 2.52
721 729 3.527937 AGCTAGGGTTTCCTTACCAAGA 58.472 45.455 0.00 0.00 41.56 3.02
722 730 4.010349 CAAGCTAGGGTTTCCTTACCAAG 58.990 47.826 0.00 0.00 41.56 3.61
780 793 4.041840 GCCACAGCAAGGAAAGAATCCC 62.042 54.545 0.00 0.00 44.00 3.85
802 821 4.219288 AGGTTTTGATTCTGATTGCTCACC 59.781 41.667 0.00 0.00 0.00 4.02
839 870 1.287425 CGATTAGCTGGACGGGAAAC 58.713 55.000 0.00 0.00 0.00 2.78
840 871 0.461339 GCGATTAGCTGGACGGGAAA 60.461 55.000 0.00 0.00 44.04 3.13
841 872 1.143183 GCGATTAGCTGGACGGGAA 59.857 57.895 0.00 0.00 44.04 3.97
842 873 2.812499 GCGATTAGCTGGACGGGA 59.188 61.111 0.00 0.00 44.04 5.14
891 922 7.959940 CCTAATCGGACCATGGAACAGAATAAT 60.960 40.741 21.47 8.71 36.78 1.28
892 923 6.687901 CCTAATCGGACCATGGAACAGAATAA 60.688 42.308 21.47 7.19 36.78 1.40
904 936 3.047695 AGAGGAACCTAATCGGACCAT 57.952 47.619 0.00 0.00 36.05 3.55
966 998 0.804933 GACCCTCGATTTTCCGACGG 60.805 60.000 7.84 7.84 39.51 4.79
1260 1298 0.652592 CGTTCTTGCCGATGACATCC 59.347 55.000 9.87 0.00 0.00 3.51
1454 1495 2.280119 CTGGCCGCGCATAAGCTA 60.280 61.111 8.75 0.98 39.10 3.32
1486 1527 0.748005 AAGCGGTCATGGAAATCGGG 60.748 55.000 0.00 0.00 0.00 5.14
1906 2987 7.735917 AGCAACTAATAATGTATGCTGACCTA 58.264 34.615 0.00 0.00 42.12 3.08
1932 3021 8.964420 TGCTCTTACATAATAAAACTTGCAAC 57.036 30.769 0.00 0.00 0.00 4.17
2224 3520 4.576463 ACAAAGTTCACCAACAGCTTCTAG 59.424 41.667 0.00 0.00 34.60 2.43
2310 3651 9.657419 GTAATGATTTTGGTCTTTCAATGGAAT 57.343 29.630 0.00 0.00 31.93 3.01
2311 3652 8.093927 GGTAATGATTTTGGTCTTTCAATGGAA 58.906 33.333 0.00 0.00 0.00 3.53
2585 3937 9.817809 CATACCTTAGCTTAAACATAGAAGTGA 57.182 33.333 0.00 0.00 0.00 3.41
2606 3958 9.392259 GACTAATTTGGGGTAATATAGCATACC 57.608 37.037 4.37 4.37 40.72 2.73
2679 4039 8.846211 AGTAAGCTACTTTCTGTGCATTTAAAA 58.154 29.630 0.00 0.00 34.86 1.52
2688 4048 7.715265 TCAAAAGAGTAAGCTACTTTCTGTG 57.285 36.000 0.00 0.00 39.59 3.66
2725 4089 1.202580 ACTGAGATGATACCGCCTTGC 60.203 52.381 0.00 0.00 0.00 4.01
2726 4090 2.898729 ACTGAGATGATACCGCCTTG 57.101 50.000 0.00 0.00 0.00 3.61
2727 4091 3.914426 AAACTGAGATGATACCGCCTT 57.086 42.857 0.00 0.00 0.00 4.35
2984 4351 7.864108 TTGGATATTTCAACATGGACTACAG 57.136 36.000 0.00 0.00 0.00 2.74
3084 7136 6.610830 TGGTGCCTTCATGAATTTATATGGTT 59.389 34.615 8.96 0.00 0.00 3.67
3107 7159 1.160329 GCCTATGCGCCTACAACTGG 61.160 60.000 4.18 0.00 0.00 4.00
3122 7175 6.945636 TGCTAAAAGCCCTATTATAGCCTA 57.054 37.500 0.00 0.00 41.51 3.93
3171 7224 3.424703 ACAACTGACAAATGAGGGATGG 58.575 45.455 0.00 0.00 0.00 3.51
3198 7251 5.008619 ACATTCAGTGCAAAACATGTTCA 57.991 34.783 12.39 2.72 0.00 3.18
3283 7338 6.935208 AGTCTTTCCCATTACTTGTACAAGAC 59.065 38.462 36.14 21.20 40.79 3.01
3661 8602 1.476891 GCTTCTATCACCGACCAGTCA 59.523 52.381 0.00 0.00 0.00 3.41
3892 8840 0.898320 CCACTCGACCTTCCAGACAT 59.102 55.000 0.00 0.00 0.00 3.06
4000 8948 3.522343 TCTCCACACTAGAGCTACAGGTA 59.478 47.826 0.00 0.00 0.00 3.08
4001 8949 2.309162 TCTCCACACTAGAGCTACAGGT 59.691 50.000 0.00 0.00 0.00 4.00
4003 8951 4.400884 ACATTCTCCACACTAGAGCTACAG 59.599 45.833 0.00 0.00 0.00 2.74
4004 8952 4.344978 ACATTCTCCACACTAGAGCTACA 58.655 43.478 0.00 0.00 0.00 2.74
4005 8953 4.993029 ACATTCTCCACACTAGAGCTAC 57.007 45.455 0.00 0.00 0.00 3.58
4006 8954 6.461648 GCATAACATTCTCCACACTAGAGCTA 60.462 42.308 0.00 0.00 0.00 3.32
4007 8955 5.683509 GCATAACATTCTCCACACTAGAGCT 60.684 44.000 0.00 0.00 0.00 4.09
4008 8956 4.509600 GCATAACATTCTCCACACTAGAGC 59.490 45.833 0.00 0.00 0.00 4.09
4011 8960 3.804325 CCGCATAACATTCTCCACACTAG 59.196 47.826 0.00 0.00 0.00 2.57
4018 8967 3.065371 CCTGTTTCCGCATAACATTCTCC 59.935 47.826 0.00 0.00 35.18 3.71
4056 9010 0.739112 CCTGAAGAGGAGCGAACTGC 60.739 60.000 0.00 0.00 42.93 4.40
4065 9019 4.079253 GGCAACATTAAACCTGAAGAGGA 58.921 43.478 0.00 0.00 42.93 3.71
4066 9020 4.082125 AGGCAACATTAAACCTGAAGAGG 58.918 43.478 0.00 0.00 42.71 3.69
4118 9072 1.575244 CATGTCACGCGATCAGGATT 58.425 50.000 15.93 0.00 0.00 3.01
4119 9073 0.249615 CCATGTCACGCGATCAGGAT 60.250 55.000 15.93 0.00 0.00 3.24
4121 9075 2.528743 GCCATGTCACGCGATCAGG 61.529 63.158 15.93 10.26 0.00 3.86
4122 9076 3.009140 GCCATGTCACGCGATCAG 58.991 61.111 15.93 0.00 0.00 2.90
4146 9100 3.857854 GCATCAGTGTCGCTGCCG 61.858 66.667 8.61 3.33 44.66 5.69
4173 9127 4.133796 GCTGGGAACAATGGCGCC 62.134 66.667 22.73 22.73 42.06 6.53
4263 9221 2.348411 AAACCACCACTTGTCTCAGG 57.652 50.000 0.00 0.00 0.00 3.86
4275 9233 1.745890 GCTCCCACCAAAAACCACC 59.254 57.895 0.00 0.00 0.00 4.61
4281 9239 1.460273 GCCTTTCGCTCCCACCAAAA 61.460 55.000 0.00 0.00 0.00 2.44
4297 9256 1.956170 CGACAGCACGAGTTTGCCT 60.956 57.895 0.00 0.00 44.14 4.75
4366 9325 2.443887 TTTTTGCATCAAGAGGCTGC 57.556 45.000 8.24 0.00 39.14 5.25
4382 9341 9.817809 GTCTTTTCCTTGAAAGAATAGGTTTTT 57.182 29.630 1.99 0.00 44.63 1.94
4383 9342 8.421784 GGTCTTTTCCTTGAAAGAATAGGTTTT 58.578 33.333 1.99 0.00 44.63 2.43
4384 9343 7.785028 AGGTCTTTTCCTTGAAAGAATAGGTTT 59.215 33.333 1.99 0.00 44.63 3.27
4385 9344 7.298374 AGGTCTTTTCCTTGAAAGAATAGGTT 58.702 34.615 1.99 0.00 44.63 3.50
4386 9345 6.853490 AGGTCTTTTCCTTGAAAGAATAGGT 58.147 36.000 1.99 0.00 44.63 3.08
4387 9346 7.767250 AAGGTCTTTTCCTTGAAAGAATAGG 57.233 36.000 1.99 0.00 44.63 2.57
4396 9355 9.807921 ACTGAATTATAAAGGTCTTTTCCTTGA 57.192 29.630 1.04 0.00 45.79 3.02
4397 9356 9.846248 CACTGAATTATAAAGGTCTTTTCCTTG 57.154 33.333 1.04 0.00 45.79 3.61
4420 9379 7.768807 AGAATAGTCAGTGAAGAACTACACT 57.231 36.000 0.00 0.00 46.32 3.55
4442 9401 8.663025 CGTATACTTGAGTCAAACTACACTAGA 58.337 37.037 7.06 0.00 0.00 2.43
4443 9402 8.449397 ACGTATACTTGAGTCAAACTACACTAG 58.551 37.037 7.06 0.00 0.00 2.57
4444 9403 8.327941 ACGTATACTTGAGTCAAACTACACTA 57.672 34.615 7.06 0.00 0.00 2.74
4445 9404 7.211966 ACGTATACTTGAGTCAAACTACACT 57.788 36.000 7.06 0.00 0.00 3.55
4446 9405 7.864307 AACGTATACTTGAGTCAAACTACAC 57.136 36.000 7.06 0.00 0.00 2.90
4447 9406 8.876275 AAAACGTATACTTGAGTCAAACTACA 57.124 30.769 7.06 0.00 0.00 2.74
4448 9407 9.189723 AGAAAACGTATACTTGAGTCAAACTAC 57.810 33.333 7.06 7.79 0.00 2.73
4449 9408 9.188588 CAGAAAACGTATACTTGAGTCAAACTA 57.811 33.333 7.06 0.00 0.00 2.24
4450 9409 7.924412 TCAGAAAACGTATACTTGAGTCAAACT 59.076 33.333 7.06 0.00 0.00 2.66
4451 9410 8.002665 GTCAGAAAACGTATACTTGAGTCAAAC 58.997 37.037 7.06 1.25 0.00 2.93
4452 9411 7.096353 CGTCAGAAAACGTATACTTGAGTCAAA 60.096 37.037 7.06 0.00 37.86 2.69
4453 9412 6.361481 CGTCAGAAAACGTATACTTGAGTCAA 59.639 38.462 5.25 5.25 37.86 3.18
4454 9413 5.854866 CGTCAGAAAACGTATACTTGAGTCA 59.145 40.000 0.56 0.00 37.86 3.41
4455 9414 6.302180 CGTCAGAAAACGTATACTTGAGTC 57.698 41.667 0.56 0.00 37.86 3.36
4474 9433 1.338011 TGCATGCAATCTGAGACGTCA 60.338 47.619 20.30 0.00 0.00 4.35
4475 9434 1.362768 TGCATGCAATCTGAGACGTC 58.637 50.000 20.30 7.70 0.00 4.34
4476 9435 2.034104 ATGCATGCAATCTGAGACGT 57.966 45.000 26.68 0.00 0.00 4.34
4477 9436 3.064958 AGAAATGCATGCAATCTGAGACG 59.935 43.478 28.53 0.00 0.00 4.18
4478 9437 4.634184 AGAAATGCATGCAATCTGAGAC 57.366 40.909 28.53 14.38 0.00 3.36
4479 9438 6.762702 TTAAGAAATGCATGCAATCTGAGA 57.237 33.333 29.31 19.20 0.00 3.27
4480 9439 6.809689 TGTTTAAGAAATGCATGCAATCTGAG 59.190 34.615 29.31 0.00 0.00 3.35
4481 9440 6.689554 TGTTTAAGAAATGCATGCAATCTGA 58.310 32.000 29.31 23.06 0.00 3.27
4482 9441 6.588756 ACTGTTTAAGAAATGCATGCAATCTG 59.411 34.615 29.31 20.89 0.00 2.90
4483 9442 6.694447 ACTGTTTAAGAAATGCATGCAATCT 58.306 32.000 26.68 25.94 0.00 2.40
4484 9443 6.956299 ACTGTTTAAGAAATGCATGCAATC 57.044 33.333 26.68 24.17 0.00 2.67
4485 9444 8.875803 CAATACTGTTTAAGAAATGCATGCAAT 58.124 29.630 26.68 14.74 0.00 3.56
4486 9445 7.148606 GCAATACTGTTTAAGAAATGCATGCAA 60.149 33.333 26.68 8.49 33.90 4.08
4487 9446 6.310956 GCAATACTGTTTAAGAAATGCATGCA 59.689 34.615 25.04 25.04 33.90 3.96
4488 9447 6.310956 TGCAATACTGTTTAAGAAATGCATGC 59.689 34.615 11.82 11.82 36.67 4.06
4489 9448 7.328982 TGTGCAATACTGTTTAAGAAATGCATG 59.671 33.333 0.00 0.00 40.40 4.06
4490 9449 7.329226 GTGTGCAATACTGTTTAAGAAATGCAT 59.671 33.333 0.00 0.00 40.40 3.96
4491 9450 6.640499 GTGTGCAATACTGTTTAAGAAATGCA 59.360 34.615 0.00 0.00 38.07 3.96
4492 9451 6.863126 AGTGTGCAATACTGTTTAAGAAATGC 59.137 34.615 4.22 0.00 36.71 3.56
4493 9452 9.329913 GTAGTGTGCAATACTGTTTAAGAAATG 57.670 33.333 13.54 0.00 39.27 2.32
4494 9453 9.284968 AGTAGTGTGCAATACTGTTTAAGAAAT 57.715 29.630 10.89 0.00 39.27 2.17
4495 9454 8.671384 AGTAGTGTGCAATACTGTTTAAGAAA 57.329 30.769 10.89 0.00 39.27 2.52
4496 9455 9.767228 TTAGTAGTGTGCAATACTGTTTAAGAA 57.233 29.630 18.75 4.38 41.59 2.52
4497 9456 9.199982 GTTAGTAGTGTGCAATACTGTTTAAGA 57.800 33.333 18.75 0.00 41.59 2.10
4498 9457 9.204570 AGTTAGTAGTGTGCAATACTGTTTAAG 57.795 33.333 18.75 0.00 41.59 1.85
4501 9460 9.550406 TTTAGTTAGTAGTGTGCAATACTGTTT 57.450 29.630 18.75 8.81 41.59 2.83
4502 9461 9.550406 TTTTAGTTAGTAGTGTGCAATACTGTT 57.450 29.630 18.75 9.08 41.59 3.16
4503 9462 9.550406 TTTTTAGTTAGTAGTGTGCAATACTGT 57.450 29.630 18.75 8.64 41.59 3.55
4620 9579 0.317103 CGGACGACCAGAAGCGATAG 60.317 60.000 4.48 0.00 35.59 2.08
4621 9580 1.028330 ACGGACGACCAGAAGCGATA 61.028 55.000 4.48 0.00 35.59 2.92
4622 9581 2.267681 GACGGACGACCAGAAGCGAT 62.268 60.000 4.48 0.00 35.59 4.58
4623 9582 2.974489 GACGGACGACCAGAAGCGA 61.974 63.158 4.48 0.00 35.59 4.93
4624 9583 2.504244 GACGGACGACCAGAAGCG 60.504 66.667 4.48 0.00 35.59 4.68
4625 9584 0.389948 AATGACGGACGACCAGAAGC 60.390 55.000 4.48 0.00 35.59 3.86
4626 9585 2.933495 TAATGACGGACGACCAGAAG 57.067 50.000 4.48 0.00 35.59 2.85
4627 9586 3.663995 TTTAATGACGGACGACCAGAA 57.336 42.857 4.48 0.00 35.59 3.02
4628 9587 3.663995 TTTTAATGACGGACGACCAGA 57.336 42.857 4.48 0.00 35.59 3.86
4629 9588 4.939509 AATTTTAATGACGGACGACCAG 57.060 40.909 4.48 0.00 35.59 4.00
4630 9589 4.630940 GGTAATTTTAATGACGGACGACCA 59.369 41.667 4.48 0.00 35.59 4.02
4631 9590 4.034394 GGGTAATTTTAATGACGGACGACC 59.966 45.833 0.00 0.00 0.00 4.79
4632 9591 4.872124 AGGGTAATTTTAATGACGGACGAC 59.128 41.667 0.00 0.00 0.00 4.34
4633 9592 5.088680 AGGGTAATTTTAATGACGGACGA 57.911 39.130 0.00 0.00 0.00 4.20
4634 9593 5.806366 AAGGGTAATTTTAATGACGGACG 57.194 39.130 0.00 0.00 0.00 4.79
4635 9594 8.733458 ACTTAAAGGGTAATTTTAATGACGGAC 58.267 33.333 0.00 0.00 31.66 4.79
4636 9595 8.866970 ACTTAAAGGGTAATTTTAATGACGGA 57.133 30.769 0.00 0.00 31.66 4.69
4637 9596 9.917129 AAACTTAAAGGGTAATTTTAATGACGG 57.083 29.630 0.00 0.00 31.66 4.79
4651 9610 8.990203 TGGGTAATTTTTACAAACTTAAAGGGT 58.010 29.630 0.38 0.00 0.00 4.34
4652 9611 9.263538 GTGGGTAATTTTTACAAACTTAAAGGG 57.736 33.333 0.38 0.00 0.00 3.95
4653 9612 9.263538 GGTGGGTAATTTTTACAAACTTAAAGG 57.736 33.333 0.38 0.00 0.00 3.11
4654 9613 9.819267 TGGTGGGTAATTTTTACAAACTTAAAG 57.181 29.630 0.38 0.00 0.00 1.85
4657 9616 9.765795 CATTGGTGGGTAATTTTTACAAACTTA 57.234 29.630 0.38 0.00 0.00 2.24
4658 9617 7.227711 GCATTGGTGGGTAATTTTTACAAACTT 59.772 33.333 0.38 0.00 0.00 2.66
4659 9618 6.708502 GCATTGGTGGGTAATTTTTACAAACT 59.291 34.615 0.38 0.00 0.00 2.66
4660 9619 6.072948 GGCATTGGTGGGTAATTTTTACAAAC 60.073 38.462 0.38 0.00 0.00 2.93
4661 9620 5.998363 GGCATTGGTGGGTAATTTTTACAAA 59.002 36.000 0.38 0.00 0.00 2.83
4662 9621 5.071788 TGGCATTGGTGGGTAATTTTTACAA 59.928 36.000 0.38 0.00 0.00 2.41
4663 9622 4.593206 TGGCATTGGTGGGTAATTTTTACA 59.407 37.500 0.38 0.00 0.00 2.41
4664 9623 5.153950 TGGCATTGGTGGGTAATTTTTAC 57.846 39.130 0.00 0.00 0.00 2.01
4665 9624 6.013379 TGAATGGCATTGGTGGGTAATTTTTA 60.013 34.615 19.07 0.00 0.00 1.52
4666 9625 4.925390 ATGGCATTGGTGGGTAATTTTT 57.075 36.364 0.00 0.00 0.00 1.94
4667 9626 4.288105 TGAATGGCATTGGTGGGTAATTTT 59.712 37.500 19.07 0.00 0.00 1.82
4668 9627 3.843027 TGAATGGCATTGGTGGGTAATTT 59.157 39.130 19.07 0.00 0.00 1.82
4669 9628 3.448934 TGAATGGCATTGGTGGGTAATT 58.551 40.909 19.07 0.00 0.00 1.40
4670 9629 3.113191 TGAATGGCATTGGTGGGTAAT 57.887 42.857 19.07 0.00 0.00 1.89
4671 9630 2.612285 TGAATGGCATTGGTGGGTAA 57.388 45.000 19.07 0.00 0.00 2.85
4672 9631 2.844654 ATGAATGGCATTGGTGGGTA 57.155 45.000 19.07 0.00 31.73 3.69
4673 9632 2.844654 TATGAATGGCATTGGTGGGT 57.155 45.000 19.07 0.00 38.44 4.51
4674 9633 3.033184 ACTTATGAATGGCATTGGTGGG 58.967 45.455 19.07 7.41 38.44 4.61
4675 9634 3.181473 CCACTTATGAATGGCATTGGTGG 60.181 47.826 19.07 20.04 44.19 4.61
4676 9635 3.181473 CCCACTTATGAATGGCATTGGTG 60.181 47.826 19.07 15.91 38.44 4.17
4677 9636 3.033184 CCCACTTATGAATGGCATTGGT 58.967 45.455 19.07 8.26 38.44 3.67
4678 9637 3.298619 TCCCACTTATGAATGGCATTGG 58.701 45.455 19.07 11.22 38.44 3.16
4679 9638 5.341872 TTTCCCACTTATGAATGGCATTG 57.658 39.130 19.07 5.15 38.44 2.82
4680 9639 5.624281 CGTTTTCCCACTTATGAATGGCATT 60.624 40.000 13.54 13.54 38.44 3.56
4681 9640 4.142182 CGTTTTCCCACTTATGAATGGCAT 60.142 41.667 0.00 0.00 41.08 4.40
4682 9641 3.192422 CGTTTTCCCACTTATGAATGGCA 59.808 43.478 0.00 0.00 34.37 4.92
4683 9642 3.442273 TCGTTTTCCCACTTATGAATGGC 59.558 43.478 0.00 0.00 34.37 4.40
4684 9643 5.835113 ATCGTTTTCCCACTTATGAATGG 57.165 39.130 0.00 0.00 35.59 3.16
4685 9644 6.851609 TGAATCGTTTTCCCACTTATGAATG 58.148 36.000 0.00 0.00 0.00 2.67
4686 9645 7.176690 ACTTGAATCGTTTTCCCACTTATGAAT 59.823 33.333 0.00 0.00 0.00 2.57
4687 9646 6.488683 ACTTGAATCGTTTTCCCACTTATGAA 59.511 34.615 0.00 0.00 0.00 2.57
4688 9647 6.001460 ACTTGAATCGTTTTCCCACTTATGA 58.999 36.000 0.00 0.00 0.00 2.15
4689 9648 6.254281 ACTTGAATCGTTTTCCCACTTATG 57.746 37.500 0.00 0.00 0.00 1.90
4690 9649 6.894339 AACTTGAATCGTTTTCCCACTTAT 57.106 33.333 0.00 0.00 0.00 1.73
4691 9650 6.702716 AAACTTGAATCGTTTTCCCACTTA 57.297 33.333 0.00 0.00 30.93 2.24
4692 9651 5.592104 AAACTTGAATCGTTTTCCCACTT 57.408 34.783 0.00 0.00 30.93 3.16
4693 9652 5.592104 AAAACTTGAATCGTTTTCCCACT 57.408 34.783 0.00 0.00 39.61 4.00
4699 9658 4.096682 TGGTCCGAAAACTTGAATCGTTTT 59.903 37.500 1.01 1.01 44.59 2.43
4700 9659 3.628487 TGGTCCGAAAACTTGAATCGTTT 59.372 39.130 0.00 0.00 36.22 3.60
4701 9660 3.207778 TGGTCCGAAAACTTGAATCGTT 58.792 40.909 0.00 0.00 34.90 3.85
4702 9661 2.841215 TGGTCCGAAAACTTGAATCGT 58.159 42.857 0.00 0.00 34.90 3.73
4703 9662 3.889196 TTGGTCCGAAAACTTGAATCG 57.111 42.857 0.00 0.00 36.39 3.34
4704 9663 7.477144 AATTTTTGGTCCGAAAACTTGAATC 57.523 32.000 17.72 0.00 30.74 2.52
4705 9664 7.439955 GGTAATTTTTGGTCCGAAAACTTGAAT 59.560 33.333 17.72 0.28 30.74 2.57
4706 9665 6.757478 GGTAATTTTTGGTCCGAAAACTTGAA 59.243 34.615 17.72 0.00 30.74 2.69
4707 9666 6.274579 GGTAATTTTTGGTCCGAAAACTTGA 58.725 36.000 17.72 2.99 30.74 3.02
4708 9667 5.174216 CGGTAATTTTTGGTCCGAAAACTTG 59.826 40.000 17.72 4.82 43.22 3.16
4709 9668 5.283294 CGGTAATTTTTGGTCCGAAAACTT 58.717 37.500 17.72 14.66 43.22 2.66
4710 9669 4.793678 GCGGTAATTTTTGGTCCGAAAACT 60.794 41.667 17.72 10.84 43.22 2.66
4711 9670 3.426191 GCGGTAATTTTTGGTCCGAAAAC 59.574 43.478 17.72 7.59 43.22 2.43
4712 9671 3.552478 GGCGGTAATTTTTGGTCCGAAAA 60.552 43.478 17.68 17.68 43.22 2.29
4713 9672 2.030096 GGCGGTAATTTTTGGTCCGAAA 60.030 45.455 0.00 0.00 43.22 3.46
4714 9673 1.540707 GGCGGTAATTTTTGGTCCGAA 59.459 47.619 6.09 0.00 43.22 4.30
4715 9674 1.166989 GGCGGTAATTTTTGGTCCGA 58.833 50.000 6.09 0.00 43.22 4.55
4716 9675 1.131693 GAGGCGGTAATTTTTGGTCCG 59.868 52.381 0.00 0.00 43.37 4.79
4717 9676 2.443416 AGAGGCGGTAATTTTTGGTCC 58.557 47.619 0.00 0.00 0.00 4.46
4718 9677 4.482386 GAAAGAGGCGGTAATTTTTGGTC 58.518 43.478 0.00 0.00 0.00 4.02
4719 9678 3.057806 CGAAAGAGGCGGTAATTTTTGGT 60.058 43.478 0.00 0.00 0.00 3.67
4720 9679 3.057806 ACGAAAGAGGCGGTAATTTTTGG 60.058 43.478 0.00 0.00 0.00 3.28
4721 9680 3.911964 CACGAAAGAGGCGGTAATTTTTG 59.088 43.478 0.00 0.00 0.00 2.44
4722 9681 3.057806 CCACGAAAGAGGCGGTAATTTTT 60.058 43.478 0.00 0.00 34.36 1.94
4723 9682 2.486592 CCACGAAAGAGGCGGTAATTTT 59.513 45.455 0.00 0.00 34.36 1.82
4724 9683 2.081462 CCACGAAAGAGGCGGTAATTT 58.919 47.619 0.00 0.00 34.36 1.82
4725 9684 1.002773 ACCACGAAAGAGGCGGTAATT 59.997 47.619 0.00 0.00 46.62 1.40
4726 9685 0.611714 ACCACGAAAGAGGCGGTAAT 59.388 50.000 0.00 0.00 46.62 1.89
4727 9686 0.037975 GACCACGAAAGAGGCGGTAA 60.038 55.000 0.00 0.00 46.62 2.85
4728 9687 1.180456 TGACCACGAAAGAGGCGGTA 61.180 55.000 0.00 0.00 46.62 4.02
4729 9688 1.827399 ATGACCACGAAAGAGGCGGT 61.827 55.000 0.00 0.00 46.62 5.68
4730 9689 0.174845 TATGACCACGAAAGAGGCGG 59.825 55.000 0.00 0.00 46.62 6.13
4731 9690 2.225068 ATATGACCACGAAAGAGGCG 57.775 50.000 0.00 0.00 46.62 5.52
4732 9691 3.050619 CGTATATGACCACGAAAGAGGC 58.949 50.000 0.00 0.00 46.62 4.70
4734 9693 3.639538 CCCGTATATGACCACGAAAGAG 58.360 50.000 0.00 0.00 40.56 2.85
4735 9694 2.223876 GCCCGTATATGACCACGAAAGA 60.224 50.000 0.00 0.00 40.56 2.52
4736 9695 2.132762 GCCCGTATATGACCACGAAAG 58.867 52.381 0.00 0.00 40.56 2.62
4737 9696 1.536496 CGCCCGTATATGACCACGAAA 60.536 52.381 0.00 0.00 40.56 3.46
4738 9697 0.031043 CGCCCGTATATGACCACGAA 59.969 55.000 0.00 0.00 40.56 3.85
4739 9698 1.655885 CGCCCGTATATGACCACGA 59.344 57.895 0.00 0.00 40.56 4.35
4740 9699 2.019951 GCGCCCGTATATGACCACG 61.020 63.158 0.00 0.00 37.89 4.94
4741 9700 2.019951 CGCGCCCGTATATGACCAC 61.020 63.158 0.00 0.00 0.00 4.16
4742 9701 2.194889 TCGCGCCCGTATATGACCA 61.195 57.895 0.00 0.00 35.54 4.02
4743 9702 1.731969 GTCGCGCCCGTATATGACC 60.732 63.158 0.00 0.00 35.54 4.02
4744 9703 0.595567 TTGTCGCGCCCGTATATGAC 60.596 55.000 0.00 0.74 35.54 3.06
4745 9704 0.318360 CTTGTCGCGCCCGTATATGA 60.318 55.000 0.00 0.00 35.54 2.15
4746 9705 0.318360 TCTTGTCGCGCCCGTATATG 60.318 55.000 0.00 0.00 35.54 1.78
4747 9706 0.386476 TTCTTGTCGCGCCCGTATAT 59.614 50.000 0.00 0.00 35.54 0.86
4748 9707 0.386476 ATTCTTGTCGCGCCCGTATA 59.614 50.000 0.00 0.00 35.54 1.47
4749 9708 0.386476 TATTCTTGTCGCGCCCGTAT 59.614 50.000 0.00 0.00 35.54 3.06
4750 9709 0.173029 TTATTCTTGTCGCGCCCGTA 59.827 50.000 0.00 0.00 35.54 4.02
4751 9710 1.079681 TTATTCTTGTCGCGCCCGT 60.080 52.632 0.00 0.00 35.54 5.28
4752 9711 1.082117 ACTTATTCTTGTCGCGCCCG 61.082 55.000 0.00 0.00 0.00 6.13
4753 9712 1.084289 AACTTATTCTTGTCGCGCCC 58.916 50.000 0.00 0.00 0.00 6.13
4754 9713 2.669434 TGTAACTTATTCTTGTCGCGCC 59.331 45.455 0.00 0.00 0.00 6.53
4755 9714 3.611113 TCTGTAACTTATTCTTGTCGCGC 59.389 43.478 0.00 0.00 0.00 6.86
4756 9715 5.756950 TTCTGTAACTTATTCTTGTCGCG 57.243 39.130 0.00 0.00 0.00 5.87
4757 9716 7.290857 TCATTCTGTAACTTATTCTTGTCGC 57.709 36.000 0.00 0.00 0.00 5.19
4763 9722 9.050601 GCTGCTTATCATTCTGTAACTTATTCT 57.949 33.333 0.00 0.00 0.00 2.40
4764 9723 8.830580 TGCTGCTTATCATTCTGTAACTTATTC 58.169 33.333 0.00 0.00 0.00 1.75
4765 9724 8.737168 TGCTGCTTATCATTCTGTAACTTATT 57.263 30.769 0.00 0.00 0.00 1.40
4766 9725 8.206867 TCTGCTGCTTATCATTCTGTAACTTAT 58.793 33.333 0.00 0.00 0.00 1.73
4767 9726 7.555965 TCTGCTGCTTATCATTCTGTAACTTA 58.444 34.615 0.00 0.00 0.00 2.24
4768 9727 6.409704 TCTGCTGCTTATCATTCTGTAACTT 58.590 36.000 0.00 0.00 0.00 2.66
4769 9728 5.982356 TCTGCTGCTTATCATTCTGTAACT 58.018 37.500 0.00 0.00 0.00 2.24
4770 9729 5.814705 ACTCTGCTGCTTATCATTCTGTAAC 59.185 40.000 0.00 0.00 0.00 2.50
4771 9730 5.814188 CACTCTGCTGCTTATCATTCTGTAA 59.186 40.000 0.00 0.00 0.00 2.41
4772 9731 5.354767 CACTCTGCTGCTTATCATTCTGTA 58.645 41.667 0.00 0.00 0.00 2.74
4773 9732 4.190001 CACTCTGCTGCTTATCATTCTGT 58.810 43.478 0.00 0.00 0.00 3.41
4774 9733 3.560481 CCACTCTGCTGCTTATCATTCTG 59.440 47.826 0.00 0.00 0.00 3.02
4775 9734 3.199508 ACCACTCTGCTGCTTATCATTCT 59.800 43.478 0.00 0.00 0.00 2.40
4776 9735 3.539604 ACCACTCTGCTGCTTATCATTC 58.460 45.455 0.00 0.00 0.00 2.67
4777 9736 3.641434 ACCACTCTGCTGCTTATCATT 57.359 42.857 0.00 0.00 0.00 2.57
4778 9737 3.276857 CAACCACTCTGCTGCTTATCAT 58.723 45.455 0.00 0.00 0.00 2.45
4779 9738 2.616256 CCAACCACTCTGCTGCTTATCA 60.616 50.000 0.00 0.00 0.00 2.15
4780 9739 2.012673 CCAACCACTCTGCTGCTTATC 58.987 52.381 0.00 0.00 0.00 1.75
4781 9740 1.352352 ACCAACCACTCTGCTGCTTAT 59.648 47.619 0.00 0.00 0.00 1.73
4782 9741 0.764890 ACCAACCACTCTGCTGCTTA 59.235 50.000 0.00 0.00 0.00 3.09
4783 9742 0.106519 AACCAACCACTCTGCTGCTT 60.107 50.000 0.00 0.00 0.00 3.91
4784 9743 0.820891 CAACCAACCACTCTGCTGCT 60.821 55.000 0.00 0.00 0.00 4.24
4785 9744 0.819259 TCAACCAACCACTCTGCTGC 60.819 55.000 0.00 0.00 0.00 5.25
4786 9745 1.808945 GATCAACCAACCACTCTGCTG 59.191 52.381 0.00 0.00 0.00 4.41
4787 9746 1.701847 AGATCAACCAACCACTCTGCT 59.298 47.619 0.00 0.00 0.00 4.24
4788 9747 2.079925 GAGATCAACCAACCACTCTGC 58.920 52.381 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.