AutoCloner

Multiple sequence alignment - TraesCS7A01G257300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7A01G257300	chr7A	100.000	4636	0	0	1	4636	246707653	246712288	0.000000e+00	8562
1	TraesCS7A01G257300	chr7D	95.664	2145	51	7	2494	4631	234072989	234075098	0.000000e+00	3408
2	TraesCS7A01G257300	chr7D	89.854	2050	103	25	509	2505	234070824	234072821	0.000000e+00	2536
3	TraesCS7A01G257300	chr7D	94.681	94	4	1	3176	3269	498229924	498229832	1.340000e-30	145
4	TraesCS7A01G257300	chr7B	87.541	2777	193	51	480	3179	205388521	205391221	0.000000e+00	3070
5	TraesCS7A01G257300	chr7B	94.528	1389	53	16	3259	4635	205391218	205392595	0.000000e+00	2122
6	TraesCS7A01G257300	chr7B	96.629	89	3	0	3174	3262	639796195	639796283	1.040000e-31	148
7	TraesCS7A01G257300	chr5D	97.753	89	2	0	3176	3264	128577586	128577674	2.230000e-33	154
8	TraesCS7A01G257300	chr5B	97.753	89	2	0	3176	3264	140965928	140966016	2.230000e-33	154
9	TraesCS7A01G257300	chrUn	90.991	111	6	3	3170	3280	104889230	104889336	3.740000e-31	147
10	TraesCS7A01G257300	chr3A	93.878	98	5	1	3172	3269	57262241	57262145	3.740000e-31	147
11	TraesCS7A01G257300	chr3D	94.681	94	4	1	3173	3266	436676895	436676987	1.340000e-30	145
12	TraesCS7A01G257300	chr3B	88.034	117	9	4	3173	3285	795334319	795334434	2.910000e-27	134

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7A01G257300	chr7A	246707653	246712288	4635	False	8562	8562	100.0000	1	4636	1	chr7A.!!$F1	4635
1	TraesCS7A01G257300	chr7D	234070824	234075098	4274	False	2972	3408	92.7590	509	4631	2	chr7D.!!$F1	4122
2	TraesCS7A01G257300	chr7B	205388521	205392595	4074	False	2596	3070	91.0345	480	4635	2	chr7B.!!$F2	4155

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
396	397	0.109723	CCAACGAAACAGGGGGAGAA	59.890	55.000	0.00	2.87	F
404	405	0.178990	ACAGGGGGAGAAGCAAACAC	60.179	55.000	0.00	3.32	F
422	423	0.183492	ACCAAAGCAGTCTCAGCCAA	59.817	50.000	0.00	4.52	F
554	558	0.366871	CCTCGACGCAAAATCTGACG	59.633	55.000	0.00	4.35	F
1428	1456	0.541392	TGTTGGCTGTGTCTGTCTGT	59.459	50.000	0.00	3.41	F
1651	1686	1.342174	CCAGTTGGCATTTCAGCTTGT	59.658	47.619	34.17	3.16	F
2712	2954	2.029470	GGCAATTTCAAACCGTGGATGA	60.029	45.455	0.00	2.92	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	End Stability	Orientation
1476	1506	1.260544	GCCAAAAGGCCACTGAAGAT	58.739	50.000	5.01	2.40	R
1479	1509	1.422531	AATGCCAAAAGGCCACTGAA	58.577	45.000	5.01	3.02	R
1484	1514	2.552591	CCAATGAAATGCCAAAAGGCCA	60.553	45.455	5.01	5.36	R
2451	2514	0.105964	TCCAGACAGACAAACACCCG	59.894	55.000	0.00	5.28	R
3317	3578	2.639839	ACCTTTATGTGGACAGTGAGCT	59.360	45.455	0.00	4.09	R
3354	3615	5.178061	TGTGTTACATGGTATTGCTCTGAG	58.822	41.667	0.00	3.35	R
3902	4171	0.174845	TGTTCATCGCCCTAACTCCG	59.825	55.000	0.00	4.63	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
42	43	6.735678	AAAAAGTAAGCAAAAACCAACAGG	57.264	33.333	0.00	0.00	0.00	4.00
43	44	5.669164	AAAGTAAGCAAAAACCAACAGGA	57.331	34.783	0.00	0.00	0.00	3.86
44	45	5.669164	AAGTAAGCAAAAACCAACAGGAA	57.331	34.783	0.00	0.00	0.00	3.36
45	46	5.669164	AGTAAGCAAAAACCAACAGGAAA	57.331	34.783	0.00	0.00	0.00	3.13
46	47	6.043854	AGTAAGCAAAAACCAACAGGAAAA	57.956	33.333	0.00	0.00	0.00	2.29
47	48	6.468543	AGTAAGCAAAAACCAACAGGAAAAA	58.531	32.000	0.00	0.00	0.00	1.94
48	49	5.621197	AAGCAAAAACCAACAGGAAAAAC	57.379	34.783	0.00	0.00	0.00	2.43
49	50	4.905429	AGCAAAAACCAACAGGAAAAACT	58.095	34.783	0.00	0.00	0.00	2.66
50	51	5.312895	AGCAAAAACCAACAGGAAAAACTT	58.687	33.333	0.00	0.00	0.00	2.66
51	52	5.181056	AGCAAAAACCAACAGGAAAAACTTG	59.819	36.000	0.00	0.00	0.00	3.16
52	53	5.180304	GCAAAAACCAACAGGAAAAACTTGA	59.820	36.000	0.00	0.00	0.00	3.02
53	54	6.620518	GCAAAAACCAACAGGAAAAACTTGAG	60.621	38.462	0.00	0.00	0.00	3.02
54	55	5.993748	AAACCAACAGGAAAAACTTGAGA	57.006	34.783	0.00	0.00	0.00	3.27
55	56	5.993748	AACCAACAGGAAAAACTTGAGAA	57.006	34.783	0.00	0.00	0.00	2.87
56	57	5.993748	ACCAACAGGAAAAACTTGAGAAA	57.006	34.783	0.00	0.00	0.00	2.52
57	58	6.353404	ACCAACAGGAAAAACTTGAGAAAA	57.647	33.333	0.00	0.00	0.00	2.29
58	59	6.398095	ACCAACAGGAAAAACTTGAGAAAAG	58.602	36.000	0.00	0.00	0.00	2.27
59	60	5.291858	CCAACAGGAAAAACTTGAGAAAAGC	59.708	40.000	0.00	0.00	0.00	3.51
60	61	5.011090	ACAGGAAAAACTTGAGAAAAGCC	57.989	39.130	0.00	0.00	0.00	4.35
61	62	4.466015	ACAGGAAAAACTTGAGAAAAGCCA	59.534	37.500	0.00	0.00	0.00	4.75
62	63	5.045872	CAGGAAAAACTTGAGAAAAGCCAG	58.954	41.667	0.00	0.00	0.00	4.85
63	64	4.956075	AGGAAAAACTTGAGAAAAGCCAGA	59.044	37.500	0.00	0.00	0.00	3.86
64	65	5.043903	GGAAAAACTTGAGAAAAGCCAGAC	58.956	41.667	0.00	0.00	0.00	3.51
65	66	4.655762	AAAACTTGAGAAAAGCCAGACC	57.344	40.909	0.00	0.00	0.00	3.85
66	67	3.584733	AACTTGAGAAAAGCCAGACCT	57.415	42.857	0.00	0.00	0.00	3.85
67	68	2.856222	ACTTGAGAAAAGCCAGACCTG	58.144	47.619	0.00	0.00	0.00	4.00
91	92	7.096884	GGAAGGTTCCTAAAATATGGACAAC	57.903	40.000	1.16	0.00	44.11	3.32
92	93	6.890268	GGAAGGTTCCTAAAATATGGACAACT	59.110	38.462	1.16	0.00	44.11	3.16
93	94	7.148069	GGAAGGTTCCTAAAATATGGACAACTG	60.148	40.741	1.16	0.00	44.11	3.16
94	95	6.187682	AGGTTCCTAAAATATGGACAACTGG	58.812	40.000	0.00	0.00	31.24	4.00
95	96	5.949952	GGTTCCTAAAATATGGACAACTGGT	59.050	40.000	0.00	0.00	31.24	4.00
96	97	6.436218	GGTTCCTAAAATATGGACAACTGGTT	59.564	38.462	0.00	0.00	31.24	3.67
97	98	7.612633	GGTTCCTAAAATATGGACAACTGGTTA	59.387	37.037	0.00	0.00	31.24	2.85
98	99	9.185680	GTTCCTAAAATATGGACAACTGGTTAT	57.814	33.333	0.00	0.00	31.24	1.89
99	100	8.974060	TCCTAAAATATGGACAACTGGTTATC	57.026	34.615	0.00	0.00	0.00	1.75
100	101	8.553153	TCCTAAAATATGGACAACTGGTTATCA	58.447	33.333	0.00	0.00	0.00	2.15
102	103	9.613428	CTAAAATATGGACAACTGGTTATCAGA	57.387	33.333	0.00	0.00	46.18	3.27
103	104	8.877864	AAAATATGGACAACTGGTTATCAGAA	57.122	30.769	0.00	0.00	46.18	3.02
104	105	7.865706	AATATGGACAACTGGTTATCAGAAC	57.134	36.000	0.00	0.00	46.18	3.01
105	106	4.015872	TGGACAACTGGTTATCAGAACC	57.984	45.455	0.00	0.00	46.18	3.62
106	107	3.650942	TGGACAACTGGTTATCAGAACCT	59.349	43.478	2.17	0.00	46.18	3.50
107	108	4.104102	TGGACAACTGGTTATCAGAACCTT	59.896	41.667	2.17	0.00	46.18	3.50
108	109	5.070685	GGACAACTGGTTATCAGAACCTTT	58.929	41.667	2.17	0.00	46.18	3.11
109	110	5.181433	GGACAACTGGTTATCAGAACCTTTC	59.819	44.000	2.17	0.00	46.18	2.62
110	111	5.070685	ACAACTGGTTATCAGAACCTTTCC	58.929	41.667	2.17	0.00	46.18	3.13
111	112	4.302559	ACTGGTTATCAGAACCTTTCCC	57.697	45.455	2.17	0.00	46.18	3.97
112	113	3.010250	ACTGGTTATCAGAACCTTTCCCC	59.990	47.826	2.17	0.00	46.18	4.81
113	114	2.990284	TGGTTATCAGAACCTTTCCCCA	59.010	45.455	2.17	0.00	40.88	4.96
114	115	3.596046	TGGTTATCAGAACCTTTCCCCAT	59.404	43.478	2.17	0.00	40.88	4.00
115	116	4.045334	TGGTTATCAGAACCTTTCCCCATT	59.955	41.667	2.17	0.00	40.88	3.16
116	117	5.023452	GGTTATCAGAACCTTTCCCCATTT	58.977	41.667	0.00	0.00	37.34	2.32
117	118	5.483937	GGTTATCAGAACCTTTCCCCATTTT	59.516	40.000	0.00	0.00	37.34	1.82
118	119	6.013725	GGTTATCAGAACCTTTCCCCATTTTT	60.014	38.462	0.00	0.00	37.34	1.94
119	120	4.953940	TCAGAACCTTTCCCCATTTTTG	57.046	40.909	0.00	0.00	0.00	2.44
120	121	4.551671	TCAGAACCTTTCCCCATTTTTGA	58.448	39.130	0.00	0.00	0.00	2.69
121	122	4.588528	TCAGAACCTTTCCCCATTTTTGAG	59.411	41.667	0.00	0.00	0.00	3.02
122	123	4.588528	CAGAACCTTTCCCCATTTTTGAGA	59.411	41.667	0.00	0.00	0.00	3.27
123	124	5.070313	CAGAACCTTTCCCCATTTTTGAGAA	59.930	40.000	0.00	0.00	0.00	2.87
124	125	5.846164	AGAACCTTTCCCCATTTTTGAGAAT	59.154	36.000	0.00	0.00	0.00	2.40
125	126	5.745312	ACCTTTCCCCATTTTTGAGAATC	57.255	39.130	0.00	0.00	0.00	2.52
138	139	2.632377	TGAGAATCATCCGAACCTTGC	58.368	47.619	0.00	0.00	42.56	4.01
139	140	1.943340	GAGAATCATCCGAACCTTGCC	59.057	52.381	0.00	0.00	33.17	4.52
140	141	1.281867	AGAATCATCCGAACCTTGCCA	59.718	47.619	0.00	0.00	0.00	4.92
141	142	1.672881	GAATCATCCGAACCTTGCCAG	59.327	52.381	0.00	0.00	0.00	4.85
142	143	0.911769	ATCATCCGAACCTTGCCAGA	59.088	50.000	0.00	0.00	0.00	3.86
143	144	0.690192	TCATCCGAACCTTGCCAGAA	59.310	50.000	0.00	0.00	0.00	3.02
144	145	1.073125	TCATCCGAACCTTGCCAGAAA	59.927	47.619	0.00	0.00	0.00	2.52
145	146	1.200020	CATCCGAACCTTGCCAGAAAC	59.800	52.381	0.00	0.00	0.00	2.78
146	147	0.882927	TCCGAACCTTGCCAGAAACG	60.883	55.000	0.00	0.00	0.00	3.60
147	148	0.882927	CCGAACCTTGCCAGAAACGA	60.883	55.000	0.00	0.00	0.00	3.85
148	149	0.941542	CGAACCTTGCCAGAAACGAA	59.058	50.000	0.00	0.00	0.00	3.85
149	150	1.333791	CGAACCTTGCCAGAAACGAAC	60.334	52.381	0.00	0.00	0.00	3.95
150	151	1.947456	GAACCTTGCCAGAAACGAACT	59.053	47.619	0.00	0.00	0.00	3.01
151	152	1.594331	ACCTTGCCAGAAACGAACTC	58.406	50.000	0.00	0.00	0.00	3.01
152	153	1.141053	ACCTTGCCAGAAACGAACTCT	59.859	47.619	0.00	0.00	0.00	3.24
153	154	1.532868	CCTTGCCAGAAACGAACTCTG	59.467	52.381	0.00	0.00	40.08	3.35
154	155	2.213499	CTTGCCAGAAACGAACTCTGT	58.787	47.619	10.65	0.00	38.96	3.41
155	156	2.325583	TGCCAGAAACGAACTCTGTT	57.674	45.000	10.65	0.00	38.96	3.16
156	157	2.639065	TGCCAGAAACGAACTCTGTTT	58.361	42.857	10.65	0.00	41.94	2.83
157	158	3.013921	TGCCAGAAACGAACTCTGTTTT	58.986	40.909	10.65	0.00	39.51	2.43
158	159	3.442273	TGCCAGAAACGAACTCTGTTTTT	59.558	39.130	10.65	0.00	39.51	1.94
180	181	6.598753	TTTTAGGAACAGAAACGAAGTCTG	57.401	37.500	11.44	11.44	45.00	3.51
188	189	3.664486	CAGAAACGAAGTCTGTAGACACG	59.336	47.826	20.80	20.80	45.00	4.49
189	190	2.047679	AACGAAGTCTGTAGACACGC	57.952	50.000	21.68	9.00	45.00	5.34
190	191	1.607628	AACGAAGTCTGTAGACACGCT	59.392	47.619	21.68	13.07	45.00	5.07
191	192	2.810274	AACGAAGTCTGTAGACACGCTA	59.190	45.455	21.68	0.00	45.00	4.26
192	193	3.364764	AACGAAGTCTGTAGACACGCTAC	60.365	47.826	21.68	0.00	45.00	3.58
193	194	4.960419	ACGAAGTCTGTAGACACGCTACC	61.960	52.174	21.68	3.49	43.32	3.18
203	204	6.512177	GTAGACACGCTACCAATCTAAATG	57.488	41.667	0.00	0.00	43.01	2.32
204	205	4.442706	AGACACGCTACCAATCTAAATGG	58.557	43.478	0.00	0.00	43.84	3.16
205	206	3.541632	ACACGCTACCAATCTAAATGGG	58.458	45.455	0.00	0.00	42.48	4.00
206	207	2.290641	CACGCTACCAATCTAAATGGGC	59.709	50.000	0.00	0.00	42.48	5.36
207	208	1.880027	CGCTACCAATCTAAATGGGCC	59.120	52.381	0.00	0.00	42.48	5.80
208	209	2.748132	CGCTACCAATCTAAATGGGCCA	60.748	50.000	9.61	9.61	42.48	5.36
209	210	3.295973	GCTACCAATCTAAATGGGCCAA	58.704	45.455	11.89	0.00	42.48	4.52
210	211	3.068165	GCTACCAATCTAAATGGGCCAAC	59.932	47.826	11.89	0.00	42.48	3.77
211	212	2.099405	ACCAATCTAAATGGGCCAACG	58.901	47.619	11.89	0.00	42.48	4.10
212	213	2.291282	ACCAATCTAAATGGGCCAACGA	60.291	45.455	11.89	5.01	42.48	3.85
213	214	2.358898	CCAATCTAAATGGGCCAACGAG	59.641	50.000	11.89	8.03	34.15	4.18
214	215	1.680338	ATCTAAATGGGCCAACGAGC	58.320	50.000	11.89	0.00	0.00	5.03
215	216	0.618458	TCTAAATGGGCCAACGAGCT	59.382	50.000	11.89	0.00	0.00	4.09
216	217	0.734889	CTAAATGGGCCAACGAGCTG	59.265	55.000	11.89	0.00	0.00	4.24
217	218	0.326595	TAAATGGGCCAACGAGCTGA	59.673	50.000	11.89	0.00	0.00	4.26
218	219	0.962356	AAATGGGCCAACGAGCTGAG	60.962	55.000	11.89	0.00	0.00	3.35
219	220	2.129555	AATGGGCCAACGAGCTGAGT	62.130	55.000	11.89	0.00	0.00	3.41
220	221	2.435059	GGGCCAACGAGCTGAGTC	60.435	66.667	4.39	0.00	0.00	3.36
221	222	2.811317	GGCCAACGAGCTGAGTCG	60.811	66.667	0.00	0.00	45.76	4.18
222	223	3.482783	GCCAACGAGCTGAGTCGC	61.483	66.667	0.00	0.00	44.06	5.19
223	224	2.259818	CCAACGAGCTGAGTCGCT	59.740	61.111	8.85	8.85	44.06	4.93
228	229	2.579249	GAGCTGAGTCGCTCGCTG	60.579	66.667	20.74	9.03	45.91	5.18
229	230	4.127040	AGCTGAGTCGCTCGCTGG	62.127	66.667	17.61	5.60	38.28	4.85
240	241	4.121669	TCGCTGGCGAGCTGAGTC	62.122	66.667	19.00	0.00	43.77	3.36
241	242	4.127040	CGCTGGCGAGCTGAGTCT	62.127	66.667	19.00	0.00	43.77	3.24
242	243	2.202730	GCTGGCGAGCTGAGTCTC	60.203	66.667	14.13	0.00	42.52	3.36
243	244	2.493973	CTGGCGAGCTGAGTCTCC	59.506	66.667	0.00	0.00	0.00	3.71
244	245	3.408501	CTGGCGAGCTGAGTCTCCG	62.409	68.421	0.00	0.00	0.00	4.63
245	246	3.444805	GGCGAGCTGAGTCTCCGT	61.445	66.667	0.00	0.00	0.00	4.69
246	247	2.202544	GCGAGCTGAGTCTCCGTG	60.203	66.667	0.00	0.00	0.00	4.94
247	248	2.202544	CGAGCTGAGTCTCCGTGC	60.203	66.667	0.00	0.00	0.00	5.34
248	249	2.183046	GAGCTGAGTCTCCGTGCC	59.817	66.667	0.00	0.00	0.00	5.01
249	250	2.601666	AGCTGAGTCTCCGTGCCA	60.602	61.111	0.00	0.00	0.00	4.92
250	251	2.125753	GCTGAGTCTCCGTGCCAG	60.126	66.667	0.00	0.00	0.00	4.85
251	252	2.640302	GCTGAGTCTCCGTGCCAGA	61.640	63.158	0.00	0.00	0.00	3.86
252	253	1.954362	GCTGAGTCTCCGTGCCAGAT	61.954	60.000	0.00	0.00	0.00	2.90
253	254	0.179116	CTGAGTCTCCGTGCCAGATG	60.179	60.000	0.00	0.00	0.00	2.90
254	255	0.900182	TGAGTCTCCGTGCCAGATGT	60.900	55.000	0.00	0.00	0.00	3.06
255	256	0.459237	GAGTCTCCGTGCCAGATGTG	60.459	60.000	0.00	0.00	0.00	3.21
256	257	0.900182	AGTCTCCGTGCCAGATGTGA	60.900	55.000	0.00	0.00	0.00	3.58
257	258	0.737715	GTCTCCGTGCCAGATGTGAC	60.738	60.000	0.00	0.00	0.00	3.67
258	259	1.448540	CTCCGTGCCAGATGTGACC	60.449	63.158	0.00	0.00	0.00	4.02
259	260	2.436646	CCGTGCCAGATGTGACCC	60.437	66.667	0.00	0.00	0.00	4.46
260	261	2.347114	CGTGCCAGATGTGACCCA	59.653	61.111	0.00	0.00	0.00	4.51
261	262	1.078214	CGTGCCAGATGTGACCCAT	60.078	57.895	0.00	0.00	36.13	4.00
262	263	0.677731	CGTGCCAGATGTGACCCATT	60.678	55.000	0.00	0.00	32.56	3.16
263	264	1.549203	GTGCCAGATGTGACCCATTT	58.451	50.000	0.00	0.00	32.56	2.32
264	265	1.203052	GTGCCAGATGTGACCCATTTG	59.797	52.381	0.00	0.00	35.85	2.32
265	266	1.203038	TGCCAGATGTGACCCATTTGT	60.203	47.619	0.00	0.00	34.61	2.83
266	267	1.474077	GCCAGATGTGACCCATTTGTC	59.526	52.381	0.00	0.00	34.61	3.18
267	268	1.739466	CCAGATGTGACCCATTTGTCG	59.261	52.381	0.00	0.00	38.11	4.35
268	269	1.131126	CAGATGTGACCCATTTGTCGC	59.869	52.381	0.00	0.00	44.18	5.19
271	272	1.210155	GTGACCCATTTGTCGCAGC	59.790	57.895	0.00	0.00	43.55	5.25
272	273	1.228094	TGACCCATTTGTCGCAGCA	60.228	52.632	0.00	0.00	38.11	4.41
273	274	0.608856	TGACCCATTTGTCGCAGCAT	60.609	50.000	0.00	0.00	38.11	3.79
274	275	0.179156	GACCCATTTGTCGCAGCATG	60.179	55.000	0.00	0.00	40.87	4.06
275	276	0.895100	ACCCATTTGTCGCAGCATGT	60.895	50.000	0.00	0.00	39.31	3.21
276	277	1.093972	CCCATTTGTCGCAGCATGTA	58.906	50.000	0.00	0.00	39.31	2.29
277	278	1.064505	CCCATTTGTCGCAGCATGTAG	59.935	52.381	0.00	0.00	39.31	2.74
278	279	2.009051	CCATTTGTCGCAGCATGTAGA	58.991	47.619	0.00	0.00	39.31	2.59
279	280	2.419673	CCATTTGTCGCAGCATGTAGAA	59.580	45.455	0.00	0.00	39.31	2.10
280	281	3.119884	CCATTTGTCGCAGCATGTAGAAA	60.120	43.478	0.00	0.00	39.31	2.52
281	282	4.439153	CCATTTGTCGCAGCATGTAGAAAT	60.439	41.667	0.00	0.00	39.31	2.17
282	283	5.220835	CCATTTGTCGCAGCATGTAGAAATA	60.221	40.000	0.00	0.00	39.31	1.40
283	284	5.469373	TTTGTCGCAGCATGTAGAAATAG	57.531	39.130	0.00	0.00	39.31	1.73
284	285	3.457234	TGTCGCAGCATGTAGAAATAGG	58.543	45.455	0.00	0.00	39.31	2.57
285	286	3.132111	TGTCGCAGCATGTAGAAATAGGA	59.868	43.478	0.00	0.00	39.31	2.94
286	287	4.119862	GTCGCAGCATGTAGAAATAGGAA	58.880	43.478	0.00	0.00	39.31	3.36
287	288	4.570772	GTCGCAGCATGTAGAAATAGGAAA	59.429	41.667	0.00	0.00	39.31	3.13
288	289	5.237344	GTCGCAGCATGTAGAAATAGGAAAT	59.763	40.000	0.00	0.00	39.31	2.17
289	290	5.237127	TCGCAGCATGTAGAAATAGGAAATG	59.763	40.000	0.00	0.00	39.31	2.32
290	291	5.218139	GCAGCATGTAGAAATAGGAAATGC	58.782	41.667	0.00	0.00	39.31	3.56
291	292	5.766222	CAGCATGTAGAAATAGGAAATGCC	58.234	41.667	0.00	0.00	39.74	4.40
292	293	5.300034	CAGCATGTAGAAATAGGAAATGCCA	59.700	40.000	0.00	0.00	39.74	4.92
293	294	5.300286	AGCATGTAGAAATAGGAAATGCCAC	59.700	40.000	0.00	0.00	39.74	5.01
294	295	5.300286	GCATGTAGAAATAGGAAATGCCACT	59.700	40.000	0.00	0.00	40.02	4.00
295	296	6.183360	GCATGTAGAAATAGGAAATGCCACTT	60.183	38.462	0.00	0.00	40.02	3.16
296	297	7.631377	GCATGTAGAAATAGGAAATGCCACTTT	60.631	37.037	0.00	0.00	40.02	2.66
297	298	7.775053	TGTAGAAATAGGAAATGCCACTTTT	57.225	32.000	0.00	0.00	40.02	2.27
298	299	7.826690	TGTAGAAATAGGAAATGCCACTTTTC	58.173	34.615	0.00	0.00	40.02	2.29
299	300	5.954335	AGAAATAGGAAATGCCACTTTTCG	58.046	37.500	0.00	0.00	40.02	3.46
300	301	5.710099	AGAAATAGGAAATGCCACTTTTCGA	59.290	36.000	0.00	0.00	40.02	3.71
301	302	6.378280	AGAAATAGGAAATGCCACTTTTCGAT	59.622	34.615	0.00	0.00	40.02	3.59
302	303	6.530019	AATAGGAAATGCCACTTTTCGATT	57.470	33.333	0.00	0.00	40.02	3.34
303	304	4.440839	AGGAAATGCCACTTTTCGATTC	57.559	40.909	0.00	0.00	40.02	2.52
304	305	3.826157	AGGAAATGCCACTTTTCGATTCA	59.174	39.130	0.00	0.00	40.02	2.57
305	306	3.920412	GGAAATGCCACTTTTCGATTCAC	59.080	43.478	0.00	0.00	34.58	3.18
306	307	4.545610	GAAATGCCACTTTTCGATTCACA	58.454	39.130	0.00	0.00	0.00	3.58
307	308	4.789012	AATGCCACTTTTCGATTCACAT	57.211	36.364	0.00	0.00	0.00	3.21
308	309	4.789012	ATGCCACTTTTCGATTCACATT	57.211	36.364	0.00	0.00	0.00	2.71
309	310	4.159377	TGCCACTTTTCGATTCACATTC	57.841	40.909	0.00	0.00	0.00	2.67
310	311	3.820467	TGCCACTTTTCGATTCACATTCT	59.180	39.130	0.00	0.00	0.00	2.40
311	312	4.278170	TGCCACTTTTCGATTCACATTCTT	59.722	37.500	0.00	0.00	0.00	2.52
312	313	5.471797	TGCCACTTTTCGATTCACATTCTTA	59.528	36.000	0.00	0.00	0.00	2.10
313	314	6.024049	GCCACTTTTCGATTCACATTCTTAG	58.976	40.000	0.00	0.00	0.00	2.18
314	315	6.128282	GCCACTTTTCGATTCACATTCTTAGA	60.128	38.462	0.00	0.00	0.00	2.10
315	316	7.573096	GCCACTTTTCGATTCACATTCTTAGAA	60.573	37.037	0.00	0.00	0.00	2.10
316	317	7.959651	CCACTTTTCGATTCACATTCTTAGAAG	59.040	37.037	0.03	0.00	0.00	2.85
317	318	8.712363	CACTTTTCGATTCACATTCTTAGAAGA	58.288	33.333	0.03	0.00	0.00	2.87
329	330	3.878778	TCTTAGAAGAAAGGCTCATGCC	58.121	45.455	0.00	0.00	45.20	4.40
330	331	3.370953	TCTTAGAAGAAAGGCTCATGCCC	60.371	47.826	3.17	0.00	45.63	5.36
331	332	6.451907	TCTTAGAAGAAAGGCTCATGCCCC	62.452	50.000	3.17	0.00	45.63	5.80
338	339	2.825836	GCTCATGCCCCAGTTCCG	60.826	66.667	0.00	0.00	0.00	4.30
339	340	2.671070	CTCATGCCCCAGTTCCGT	59.329	61.111	0.00	0.00	0.00	4.69
340	341	1.002134	CTCATGCCCCAGTTCCGTT	60.002	57.895	0.00	0.00	0.00	4.44
341	342	1.002624	TCATGCCCCAGTTCCGTTC	60.003	57.895	0.00	0.00	0.00	3.95
342	343	1.303236	CATGCCCCAGTTCCGTTCA	60.303	57.895	0.00	0.00	0.00	3.18
343	344	0.680921	CATGCCCCAGTTCCGTTCAT	60.681	55.000	0.00	0.00	0.00	2.57
344	345	0.916086	ATGCCCCAGTTCCGTTCATA	59.084	50.000	0.00	0.00	0.00	2.15
345	346	0.693622	TGCCCCAGTTCCGTTCATAA	59.306	50.000	0.00	0.00	0.00	1.90
346	347	1.283613	TGCCCCAGTTCCGTTCATAAT	59.716	47.619	0.00	0.00	0.00	1.28
347	348	1.676006	GCCCCAGTTCCGTTCATAATG	59.324	52.381	0.00	0.00	0.00	1.90
348	349	2.682563	GCCCCAGTTCCGTTCATAATGA	60.683	50.000	0.00	0.00	0.00	2.57
349	350	3.616219	CCCCAGTTCCGTTCATAATGAA	58.384	45.455	0.00	0.00	33.32	2.57
350	351	4.013728	CCCCAGTTCCGTTCATAATGAAA	58.986	43.478	0.00	0.00	38.22	2.69
351	352	4.142469	CCCCAGTTCCGTTCATAATGAAAC	60.142	45.833	0.00	0.00	38.22	2.78
352	353	4.142469	CCCAGTTCCGTTCATAATGAAACC	60.142	45.833	0.00	0.00	38.22	3.27
353	354	4.457603	CCAGTTCCGTTCATAATGAAACCA	59.542	41.667	0.00	0.00	38.22	3.67
354	355	5.048364	CCAGTTCCGTTCATAATGAAACCAA	60.048	40.000	0.00	0.00	38.22	3.67
355	356	6.442952	CAGTTCCGTTCATAATGAAACCAAA	58.557	36.000	0.00	0.00	38.22	3.28
356	357	6.582295	CAGTTCCGTTCATAATGAAACCAAAG	59.418	38.462	0.00	0.00	38.22	2.77
357	358	6.264518	AGTTCCGTTCATAATGAAACCAAAGT	59.735	34.615	0.00	0.00	38.22	2.66
358	359	7.446013	AGTTCCGTTCATAATGAAACCAAAGTA	59.554	33.333	0.00	0.00	38.22	2.24
359	360	7.747155	TCCGTTCATAATGAAACCAAAGTAA	57.253	32.000	0.00	0.00	38.22	2.24
360	361	7.586747	TCCGTTCATAATGAAACCAAAGTAAC	58.413	34.615	0.00	0.00	38.22	2.50
361	362	7.446013	TCCGTTCATAATGAAACCAAAGTAACT	59.554	33.333	0.00	0.00	38.22	2.24
362	363	8.079809	CCGTTCATAATGAAACCAAAGTAACTT	58.920	33.333	0.00	0.00	38.22	2.66
363	364	9.458374	CGTTCATAATGAAACCAAAGTAACTTT	57.542	29.630	0.00	0.00	38.22	2.66
369	370	7.648039	ATGAAACCAAAGTAACTTTACACCA	57.352	32.000	2.10	0.00	36.12	4.17
370	371	7.090953	TGAAACCAAAGTAACTTTACACCAG	57.909	36.000	2.10	0.00	36.12	4.00
371	372	6.885376	TGAAACCAAAGTAACTTTACACCAGA	59.115	34.615	2.10	0.00	36.12	3.86
372	373	7.393796	TGAAACCAAAGTAACTTTACACCAGAA	59.606	33.333	2.10	0.00	36.12	3.02
373	374	7.891498	AACCAAAGTAACTTTACACCAGAAT	57.109	32.000	2.10	0.00	36.12	2.40
374	375	7.506328	ACCAAAGTAACTTTACACCAGAATC	57.494	36.000	2.10	0.00	36.12	2.52
375	376	7.287810	ACCAAAGTAACTTTACACCAGAATCT	58.712	34.615	2.10	0.00	36.12	2.40
376	377	7.444487	ACCAAAGTAACTTTACACCAGAATCTC	59.556	37.037	2.10	0.00	36.12	2.75
377	378	7.094762	CCAAAGTAACTTTACACCAGAATCTCC	60.095	40.741	2.10	0.00	36.12	3.71
378	379	6.051179	AGTAACTTTACACCAGAATCTCCC	57.949	41.667	2.10	0.00	36.12	4.30
379	380	4.993705	AACTTTACACCAGAATCTCCCA	57.006	40.909	0.00	0.00	0.00	4.37
380	381	4.993705	ACTTTACACCAGAATCTCCCAA	57.006	40.909	0.00	0.00	0.00	4.12
381	382	4.652822	ACTTTACACCAGAATCTCCCAAC	58.347	43.478	0.00	0.00	0.00	3.77
382	383	3.328382	TTACACCAGAATCTCCCAACG	57.672	47.619	0.00	0.00	0.00	4.10
383	384	1.348064	ACACCAGAATCTCCCAACGA	58.652	50.000	0.00	0.00	0.00	3.85
384	385	1.697432	ACACCAGAATCTCCCAACGAA	59.303	47.619	0.00	0.00	0.00	3.85
385	386	2.105821	ACACCAGAATCTCCCAACGAAA	59.894	45.455	0.00	0.00	0.00	3.46
386	387	2.484264	CACCAGAATCTCCCAACGAAAC	59.516	50.000	0.00	0.00	0.00	2.78
387	388	2.105821	ACCAGAATCTCCCAACGAAACA	59.894	45.455	0.00	0.00	0.00	2.83
388	389	2.744202	CCAGAATCTCCCAACGAAACAG	59.256	50.000	0.00	0.00	0.00	3.16
389	390	2.744202	CAGAATCTCCCAACGAAACAGG	59.256	50.000	0.00	0.00	0.00	4.00
390	391	2.084546	GAATCTCCCAACGAAACAGGG	58.915	52.381	0.00	0.00	44.22	4.45
391	392	0.328258	ATCTCCCAACGAAACAGGGG	59.672	55.000	0.00	0.00	43.03	4.79
392	393	1.303317	CTCCCAACGAAACAGGGGG	60.303	63.158	0.00	0.00	43.03	5.40
393	394	1.770927	TCCCAACGAAACAGGGGGA	60.771	57.895	0.00	0.00	45.34	4.81
394	395	1.303317	CCCAACGAAACAGGGGGAG	60.303	63.158	0.00	0.00	41.49	4.30
395	396	1.758592	CCAACGAAACAGGGGGAGA	59.241	57.895	0.00	0.00	0.00	3.71
396	397	0.109723	CCAACGAAACAGGGGGAGAA	59.890	55.000	0.00	0.00	0.00	2.87
397	398	1.523758	CAACGAAACAGGGGGAGAAG	58.476	55.000	0.00	0.00	0.00	2.85
398	399	0.250770	AACGAAACAGGGGGAGAAGC	60.251	55.000	0.00	0.00	0.00	3.86
399	400	1.374947	CGAAACAGGGGGAGAAGCA	59.625	57.895	0.00	0.00	0.00	3.91
400	401	0.250727	CGAAACAGGGGGAGAAGCAA	60.251	55.000	0.00	0.00	0.00	3.91
401	402	1.817740	CGAAACAGGGGGAGAAGCAAA	60.818	52.381	0.00	0.00	0.00	3.68
402	403	1.613925	GAAACAGGGGGAGAAGCAAAC	59.386	52.381	0.00	0.00	0.00	2.93
403	404	0.555769	AACAGGGGGAGAAGCAAACA	59.444	50.000	0.00	0.00	0.00	2.83
404	405	0.178990	ACAGGGGGAGAAGCAAACAC	60.179	55.000	0.00	0.00	0.00	3.32
405	406	0.895559	CAGGGGGAGAAGCAAACACC	60.896	60.000	0.00	0.00	0.00	4.16
406	407	1.152830	GGGGGAGAAGCAAACACCA	59.847	57.895	0.00	0.00	0.00	4.17
407	408	0.469144	GGGGGAGAAGCAAACACCAA	60.469	55.000	0.00	0.00	0.00	3.67
408	409	1.408969	GGGGAGAAGCAAACACCAAA	58.591	50.000	0.00	0.00	0.00	3.28
409	410	1.341209	GGGGAGAAGCAAACACCAAAG	59.659	52.381	0.00	0.00	0.00	2.77
410	411	1.269778	GGGAGAAGCAAACACCAAAGC	60.270	52.381	0.00	0.00	0.00	3.51
411	412	1.408702	GGAGAAGCAAACACCAAAGCA	59.591	47.619	0.00	0.00	0.00	3.91
412	413	2.544486	GGAGAAGCAAACACCAAAGCAG	60.544	50.000	0.00	0.00	0.00	4.24
413	414	2.099756	GAGAAGCAAACACCAAAGCAGT	59.900	45.455	0.00	0.00	0.00	4.40
414	415	2.099756	AGAAGCAAACACCAAAGCAGTC	59.900	45.455	0.00	0.00	0.00	3.51
415	416	1.767759	AGCAAACACCAAAGCAGTCT	58.232	45.000	0.00	0.00	0.00	3.24
416	417	1.678101	AGCAAACACCAAAGCAGTCTC	59.322	47.619	0.00	0.00	0.00	3.36
417	418	1.405105	GCAAACACCAAAGCAGTCTCA	59.595	47.619	0.00	0.00	0.00	3.27
418	419	2.542411	GCAAACACCAAAGCAGTCTCAG	60.542	50.000	0.00	0.00	0.00	3.35
419	420	1.312815	AACACCAAAGCAGTCTCAGC	58.687	50.000	0.00	0.00	0.00	4.26
420	421	0.536006	ACACCAAAGCAGTCTCAGCC	60.536	55.000	0.00	0.00	0.00	4.85
421	422	0.535780	CACCAAAGCAGTCTCAGCCA	60.536	55.000	0.00	0.00	0.00	4.75
422	423	0.183492	ACCAAAGCAGTCTCAGCCAA	59.817	50.000	0.00	0.00	0.00	4.52
423	424	1.202976	ACCAAAGCAGTCTCAGCCAAT	60.203	47.619	0.00	0.00	0.00	3.16
424	425	1.891150	CCAAAGCAGTCTCAGCCAATT	59.109	47.619	0.00	0.00	0.00	2.32
425	426	2.298163	CCAAAGCAGTCTCAGCCAATTT	59.702	45.455	0.00	0.00	0.00	1.82
426	427	3.572584	CAAAGCAGTCTCAGCCAATTTC	58.427	45.455	0.00	0.00	0.00	2.17
427	428	2.875094	AGCAGTCTCAGCCAATTTCT	57.125	45.000	0.00	0.00	0.00	2.52
428	429	3.151912	AGCAGTCTCAGCCAATTTCTT	57.848	42.857	0.00	0.00	0.00	2.52
429	430	3.080319	AGCAGTCTCAGCCAATTTCTTC	58.920	45.455	0.00	0.00	0.00	2.87
430	431	3.080319	GCAGTCTCAGCCAATTTCTTCT	58.920	45.455	0.00	0.00	0.00	2.85
431	432	3.119919	GCAGTCTCAGCCAATTTCTTCTG	60.120	47.826	0.00	0.00	0.00	3.02
432	433	4.070716	CAGTCTCAGCCAATTTCTTCTGT	58.929	43.478	0.00	0.00	0.00	3.41
433	434	4.070716	AGTCTCAGCCAATTTCTTCTGTG	58.929	43.478	0.00	0.00	0.00	3.66
434	435	3.817647	GTCTCAGCCAATTTCTTCTGTGT	59.182	43.478	0.00	0.00	0.00	3.72
435	436	4.276926	GTCTCAGCCAATTTCTTCTGTGTT	59.723	41.667	0.00	0.00	0.00	3.32
436	437	4.516698	TCTCAGCCAATTTCTTCTGTGTTC	59.483	41.667	0.00	0.00	0.00	3.18
437	438	4.464008	TCAGCCAATTTCTTCTGTGTTCT	58.536	39.130	0.00	0.00	0.00	3.01
438	439	4.889409	TCAGCCAATTTCTTCTGTGTTCTT	59.111	37.500	0.00	0.00	0.00	2.52
439	440	5.360714	TCAGCCAATTTCTTCTGTGTTCTTT	59.639	36.000	0.00	0.00	0.00	2.52
440	441	6.044682	CAGCCAATTTCTTCTGTGTTCTTTT	58.955	36.000	0.00	0.00	0.00	2.27
441	442	6.536224	CAGCCAATTTCTTCTGTGTTCTTTTT	59.464	34.615	0.00	0.00	0.00	1.94
541	543	2.935481	ATAGTTTCGGACACCTCGAC	57.065	50.000	0.00	0.00	36.30	4.20
543	545	2.049802	TTTCGGACACCTCGACGC	60.050	61.111	0.00	0.00	36.30	5.19
544	546	2.847754	TTTCGGACACCTCGACGCA	61.848	57.895	0.00	0.00	36.30	5.24
554	558	0.366871	CCTCGACGCAAAATCTGACG	59.633	55.000	0.00	0.00	0.00	4.35
560	564	3.663908	GACGCAAAATCTGACGATGAAG	58.336	45.455	0.00	0.00	0.00	3.02
567	571	3.594603	ATCTGACGATGAAGACGGTTT	57.405	42.857	0.00	0.00	34.93	3.27
577	581	3.822940	TGAAGACGGTTTGGTATTTGGT	58.177	40.909	0.00	0.00	0.00	3.67
578	582	3.566322	TGAAGACGGTTTGGTATTTGGTG	59.434	43.478	0.00	0.00	0.00	4.17
579	583	3.217681	AGACGGTTTGGTATTTGGTGT	57.782	42.857	0.00	0.00	0.00	4.16
580	584	3.558033	AGACGGTTTGGTATTTGGTGTT	58.442	40.909	0.00	0.00	0.00	3.32
581	585	3.955551	AGACGGTTTGGTATTTGGTGTTT	59.044	39.130	0.00	0.00	0.00	2.83
585	589	4.441634	CGGTTTGGTATTTGGTGTTTTGGA	60.442	41.667	0.00	0.00	0.00	3.53
586	590	4.812091	GGTTTGGTATTTGGTGTTTTGGAC	59.188	41.667	0.00	0.00	0.00	4.02
587	591	5.420409	GTTTGGTATTTGGTGTTTTGGACA	58.580	37.500	0.00	0.00	35.42	4.02
600	604	6.055231	TGTTTTGGACACACGATTTAAGAG	57.945	37.500	0.00	0.00	32.00	2.85
605	609	6.295039	TGGACACACGATTTAAGAGAAAAC	57.705	37.500	0.00	0.00	0.00	2.43
606	610	5.818336	TGGACACACGATTTAAGAGAAAACA	59.182	36.000	0.00	0.00	0.00	2.83
665	671	6.477033	CCAAATTACGAGAAGATGTAGAGTGG	59.523	42.308	0.00	0.00	0.00	4.00
666	672	6.777213	AATTACGAGAAGATGTAGAGTGGT	57.223	37.500	0.00	0.00	0.00	4.16
670	676	4.767928	ACGAGAAGATGTAGAGTGGTCTTT	59.232	41.667	0.00	0.00	33.84	2.52
671	677	5.098893	CGAGAAGATGTAGAGTGGTCTTTG	58.901	45.833	0.00	0.00	33.84	2.77
672	678	4.826556	AGAAGATGTAGAGTGGTCTTTGC	58.173	43.478	0.00	0.00	33.84	3.68
673	679	4.284490	AGAAGATGTAGAGTGGTCTTTGCA	59.716	41.667	0.00	0.00	33.84	4.08
674	680	4.623932	AGATGTAGAGTGGTCTTTGCAA	57.376	40.909	0.00	0.00	33.84	4.08
675	681	4.973168	AGATGTAGAGTGGTCTTTGCAAA	58.027	39.130	12.14	12.14	33.84	3.68
676	682	4.999950	AGATGTAGAGTGGTCTTTGCAAAG	59.000	41.667	29.53	29.53	37.36	2.77
677	683	3.476552	TGTAGAGTGGTCTTTGCAAAGG	58.523	45.455	33.01	18.01	36.67	3.11
679	685	1.215423	AGAGTGGTCTTTGCAAAGGGT	59.785	47.619	33.01	16.59	36.67	4.34
680	686	2.441750	AGAGTGGTCTTTGCAAAGGGTA	59.558	45.455	33.01	19.08	36.67	3.69
681	687	3.117663	AGAGTGGTCTTTGCAAAGGGTAA	60.118	43.478	33.01	15.58	36.67	2.85
682	688	2.956333	AGTGGTCTTTGCAAAGGGTAAC	59.044	45.455	33.01	24.33	36.67	2.50
683	689	8.871533	TAGAGTGGTCTTTGCAAAGGGTAACC	62.872	46.154	33.01	30.41	46.35	2.85
706	712	9.454859	AACCTTTAAGATGGTGATCTCTTTAAG	57.545	33.333	11.42	11.42	38.03	1.85
721	727	7.789273	TCTCTTTAAGTAGTGATCTCGTAGG	57.211	40.000	0.00	0.00	0.00	3.18
722	728	7.563020	TCTCTTTAAGTAGTGATCTCGTAGGA	58.437	38.462	0.00	0.00	0.00	2.94
723	729	7.495279	TCTCTTTAAGTAGTGATCTCGTAGGAC	59.505	40.741	0.00	0.00	0.00	3.85
724	730	6.541641	TCTTTAAGTAGTGATCTCGTAGGACC	59.458	42.308	0.00	0.00	0.00	4.46
725	731	3.928005	AGTAGTGATCTCGTAGGACCA	57.072	47.619	0.00	0.00	0.00	4.02
726	732	4.232188	AGTAGTGATCTCGTAGGACCAA	57.768	45.455	0.00	0.00	0.00	3.67
727	733	3.946558	AGTAGTGATCTCGTAGGACCAAC	59.053	47.826	0.00	0.00	0.00	3.77
779	785	0.947244	CTTGCTCATATTGGGCCGAC	59.053	55.000	0.00	0.00	45.08	4.79
797	825	2.484889	GACTTCGGTCTTTGTCTTGCT	58.515	47.619	0.00	0.00	41.44	3.91
808	836	2.057137	TGTCTTGCTCATATTGGGCC	57.943	50.000	0.00	0.00	45.08	5.80
816	844	1.625315	CTCATATTGGGCCGAGATGGA	59.375	52.381	24.58	12.62	42.00	3.41
823	851	3.593442	TGGGCCGAGATGGAAATTAAT	57.407	42.857	0.00	0.00	42.00	1.40
860	888	2.769663	TCCGAGGCAATTATACTGGTGT	59.230	45.455	0.00	0.00	0.00	4.16
874	902	2.092429	ACTGGTGTCTGCCTGAGAAAAA	60.092	45.455	0.00	0.00	30.26	1.94
877	905	3.960102	TGGTGTCTGCCTGAGAAAAATTT	59.040	39.130	0.00	0.00	30.26	1.82
915	943	3.066900	CGTCTCGTCTATTCCCATTCTGT	59.933	47.826	0.00	0.00	0.00	3.41
1130	1158	2.580867	CTCGCTCGGAGGCTTTCG	60.581	66.667	7.20	1.42	39.22	3.46
1133	1161	2.445438	CGCTCGGAGGCTTTCGAAC	61.445	63.158	0.00	0.00	34.87	3.95
1171	1199	3.130869	TGTTTCTGTGCTGCTTGATGTTT	59.869	39.130	0.00	0.00	0.00	2.83
1172	1200	4.114794	GTTTCTGTGCTGCTTGATGTTTT	58.885	39.130	0.00	0.00	0.00	2.43
1175	1203	1.409790	TGTGCTGCTTGATGTTTTGCT	59.590	42.857	0.00	0.00	0.00	3.91
1200	1228	2.731572	CAATCCCTGCTTTGGATCAGT	58.268	47.619	0.00	0.00	41.80	3.41
1205	1233	4.934356	TCCCTGCTTTGGATCAGTTAATT	58.066	39.130	0.00	0.00	0.00	1.40
1315	1343	6.592994	GCTTAGTACCCTTTTCGTTGTAAGAT	59.407	38.462	0.00	0.00	0.00	2.40
1328	1356	5.421056	TCGTTGTAAGATGATCTGGTTAGGT	59.579	40.000	0.00	0.00	0.00	3.08
1336	1364	4.649088	TGATCTGGTTAGGTGTATCGTG	57.351	45.455	0.00	0.00	0.00	4.35
1351	1379	5.115171	GTGTATCGTGTATGTCATTCGTAGC	59.885	44.000	0.00	0.00	0.00	3.58
1399	1427	2.556189	CAGATCAGCAGCTACGGAGTAT	59.444	50.000	0.00	0.00	44.56	2.12
1425	1453	3.179048	GTTTTTGTTGGCTGTGTCTGTC	58.821	45.455	0.00	0.00	0.00	3.51
1428	1456	0.541392	TGTTGGCTGTGTCTGTCTGT	59.459	50.000	0.00	0.00	0.00	3.41
1434	1462	4.460263	TGGCTGTGTCTGTCTGTTTAATT	58.540	39.130	0.00	0.00	0.00	1.40
1454	1482	9.905713	TTTAATTAGACATAGAGGAAATGTGCT	57.094	29.630	0.00	0.00	37.69	4.40
1484	1514	4.082895	GCTTCTGCAAATGTGATCTTCAGT	60.083	41.667	0.00	0.00	39.41	3.41
1592	1627	7.532571	CATGATATGAACAATGTTGTCACTGT	58.467	34.615	2.20	0.00	41.31	3.55
1598	1633	2.426738	ACAATGTTGTCACTGTTGGTGG	59.573	45.455	0.00	0.00	45.38	4.61
1614	1649	3.429492	TGGTGGATCTTATTGCAGCAAA	58.571	40.909	12.97	0.00	41.52	3.68
1650	1685	2.074547	CCAGTTGGCATTTCAGCTTG	57.925	50.000	0.00	0.00	34.17	4.01
1651	1686	1.342174	CCAGTTGGCATTTCAGCTTGT	59.658	47.619	0.00	0.00	34.17	3.16
1652	1687	2.224113	CCAGTTGGCATTTCAGCTTGTT	60.224	45.455	0.00	0.00	34.17	2.83
1653	1688	2.798283	CAGTTGGCATTTCAGCTTGTTG	59.202	45.455	0.00	0.00	34.17	3.33
1654	1689	2.694628	AGTTGGCATTTCAGCTTGTTGA	59.305	40.909	0.00	0.00	34.17	3.18
1655	1690	3.322828	AGTTGGCATTTCAGCTTGTTGAT	59.677	39.130	0.00	0.00	34.17	2.57
1656	1691	4.523943	AGTTGGCATTTCAGCTTGTTGATA	59.476	37.500	0.00	0.00	34.17	2.15
1657	1692	5.186409	AGTTGGCATTTCAGCTTGTTGATAT	59.814	36.000	0.00	0.00	34.17	1.63
1658	1693	5.664294	TGGCATTTCAGCTTGTTGATATT	57.336	34.783	0.00	0.00	34.17	1.28
1659	1694	6.040209	TGGCATTTCAGCTTGTTGATATTT	57.960	33.333	0.00	0.00	34.17	1.40
1660	1695	6.101332	TGGCATTTCAGCTTGTTGATATTTC	58.899	36.000	0.00	0.00	34.17	2.17
1661	1696	6.101332	GGCATTTCAGCTTGTTGATATTTCA	58.899	36.000	0.00	0.00	34.17	2.69
1662	1697	6.255020	GGCATTTCAGCTTGTTGATATTTCAG	59.745	38.462	0.00	0.00	31.71	3.02
1663	1698	6.255020	GCATTTCAGCTTGTTGATATTTCAGG	59.745	38.462	0.00	0.00	32.27	3.86
1664	1699	6.899393	TTTCAGCTTGTTGATATTTCAGGT	57.101	33.333	0.00	0.00	32.27	4.00
1665	1700	6.899393	TTCAGCTTGTTGATATTTCAGGTT	57.101	33.333	0.00	0.00	32.27	3.50
1708	1743	4.216902	TGCATTGTTTTCACCTGATCTCTG	59.783	41.667	0.00	0.00	0.00	3.35
1714	1749	5.474532	TGTTTTCACCTGATCTCTGAAATGG	59.525	40.000	11.42	0.00	34.65	3.16
1718	1753	5.494724	TCACCTGATCTCTGAAATGGAAAG	58.505	41.667	0.00	0.00	0.00	2.62
1736	1771	4.695455	GGAAAGTGTTGCTGCTATTAGTCA	59.305	41.667	0.00	0.00	0.00	3.41
2142	2201	3.210528	GATCCCTGCTGCTGCTGC	61.211	66.667	22.51	22.51	40.48	5.25
2143	2202	3.700831	GATCCCTGCTGCTGCTGCT	62.701	63.158	27.67	10.93	40.48	4.24
2144	2203	3.997400	ATCCCTGCTGCTGCTGCTG	62.997	63.158	27.67	25.97	40.48	4.41
2209	2268	2.125952	GCGCCAAAGCAATCCCAC	60.126	61.111	0.00	0.00	39.83	4.61
2228	2287	3.586892	CACGAAAAGGTAGGAGAGTTCC	58.413	50.000	0.00	0.00	44.39	3.62
2417	2480	8.226819	TGAACTCTGATCCTTAGTGTACTATG	57.773	38.462	0.00	0.00	0.00	2.23
2712	2954	2.029470	GGCAATTTCAAACCGTGGATGA	60.029	45.455	0.00	0.00	0.00	2.92
2947	3189	5.163814	CCTGAGCAATGTAAGACTAAACTGC	60.164	44.000	0.00	0.00	0.00	4.40
3023	3265	4.516698	AGTGAAATTGTAGCAGTTGAGTGG	59.483	41.667	0.00	0.00	0.00	4.00
3027	3269	5.852282	AATTGTAGCAGTTGAGTGGTTTT	57.148	34.783	0.00	0.00	0.00	2.43
3210	3471	9.585099	TCCGTAAAGAAATATAAGAGCGTTTAA	57.415	29.630	0.00	0.00	0.00	1.52
3317	3578	7.880160	ACCAGATTTAGCATATTACAAAGCA	57.120	32.000	0.00	0.00	0.00	3.91
3854	4123	2.810439	TGCCTTTTGGGATTGTTTCG	57.190	45.000	0.00	0.00	40.82	3.46
3886	4155	4.823989	GCAGATCCAGTTGTTGCCTATTAT	59.176	41.667	0.00	0.00	0.00	1.28
3971	4240	2.092429	GGAGGATCTGGGTGTTGCATAA	60.092	50.000	0.00	0.00	33.73	1.90
4008	4282	3.243401	GGTTTCTCCTGTTTTGCGAATGT	60.243	43.478	0.00	0.00	0.00	2.71
4015	4289	3.178267	CTGTTTTGCGAATGTGTGTTGT	58.822	40.909	0.00	0.00	0.00	3.32
4136	4410	2.113774	TTGTGGACTGGGCTGCTG	59.886	61.111	0.00	0.00	0.00	4.41
4251	4525	3.178046	ACCATGTACAGGTGGTGTGATA	58.822	45.455	18.33	0.00	46.55	2.15
4289	4563	1.081242	GGACATGTTGTGCAAGCGG	60.081	57.895	0.00	0.00	38.66	5.52
4448	4722	6.961360	ACCGTCACTAGATAATTCTCATCA	57.039	37.500	0.00	0.00	33.17	3.07
4631	4906	7.412853	AACCACCAACAAACTAGTAACAATT	57.587	32.000	0.00	0.00	0.00	2.32
4632	4907	6.801575	ACCACCAACAAACTAGTAACAATTG	58.198	36.000	3.24	3.24	0.00	2.32
4633	4908	5.689961	CCACCAACAAACTAGTAACAATTGC	59.310	40.000	5.05	0.00	0.00	3.56
4634	4909	6.269315	CACCAACAAACTAGTAACAATTGCA	58.731	36.000	5.05	0.00	0.00	4.08
4635	4910	6.417635	CACCAACAAACTAGTAACAATTGCAG	59.582	38.462	5.05	0.00	0.00	4.41

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
16	17	8.888716	CCTGTTGGTTTTTGCTTACTTTTTATT	58.111	29.630	0.00	0.00	0.00	1.40
17	18	8.261522	TCCTGTTGGTTTTTGCTTACTTTTTAT	58.738	29.630	0.00	0.00	34.23	1.40
18	19	7.612677	TCCTGTTGGTTTTTGCTTACTTTTTA	58.387	30.769	0.00	0.00	34.23	1.52
19	20	6.468543	TCCTGTTGGTTTTTGCTTACTTTTT	58.531	32.000	0.00	0.00	34.23	1.94
20	21	6.043854	TCCTGTTGGTTTTTGCTTACTTTT	57.956	33.333	0.00	0.00	34.23	2.27
21	22	5.669164	TCCTGTTGGTTTTTGCTTACTTT	57.331	34.783	0.00	0.00	34.23	2.66
22	23	5.669164	TTCCTGTTGGTTTTTGCTTACTT	57.331	34.783	0.00	0.00	34.23	2.24
23	24	5.669164	TTTCCTGTTGGTTTTTGCTTACT	57.331	34.783	0.00	0.00	34.23	2.24
24	25	6.370442	AGTTTTTCCTGTTGGTTTTTGCTTAC	59.630	34.615	0.00	0.00	34.23	2.34
25	26	6.468543	AGTTTTTCCTGTTGGTTTTTGCTTA	58.531	32.000	0.00	0.00	34.23	3.09
26	27	5.312895	AGTTTTTCCTGTTGGTTTTTGCTT	58.687	33.333	0.00	0.00	34.23	3.91
27	28	4.905429	AGTTTTTCCTGTTGGTTTTTGCT	58.095	34.783	0.00	0.00	34.23	3.91
28	29	5.180304	TCAAGTTTTTCCTGTTGGTTTTTGC	59.820	36.000	0.00	0.00	34.23	3.68
29	30	6.648725	TCTCAAGTTTTTCCTGTTGGTTTTTG	59.351	34.615	0.00	0.00	34.23	2.44
30	31	6.764379	TCTCAAGTTTTTCCTGTTGGTTTTT	58.236	32.000	0.00	0.00	34.23	1.94
31	32	6.353404	TCTCAAGTTTTTCCTGTTGGTTTT	57.647	33.333	0.00	0.00	34.23	2.43
32	33	5.993748	TCTCAAGTTTTTCCTGTTGGTTT	57.006	34.783	0.00	0.00	34.23	3.27
33	34	5.993748	TTCTCAAGTTTTTCCTGTTGGTT	57.006	34.783	0.00	0.00	34.23	3.67
34	35	5.993748	TTTCTCAAGTTTTTCCTGTTGGT	57.006	34.783	0.00	0.00	34.23	3.67
35	36	5.291858	GCTTTTCTCAAGTTTTTCCTGTTGG	59.708	40.000	0.00	0.00	0.00	3.77
36	37	5.291858	GGCTTTTCTCAAGTTTTTCCTGTTG	59.708	40.000	0.00	0.00	0.00	3.33
37	38	5.046663	TGGCTTTTCTCAAGTTTTTCCTGTT	60.047	36.000	0.00	0.00	0.00	3.16
38	39	4.466015	TGGCTTTTCTCAAGTTTTTCCTGT	59.534	37.500	0.00	0.00	0.00	4.00
39	40	5.009854	TGGCTTTTCTCAAGTTTTTCCTG	57.990	39.130	0.00	0.00	0.00	3.86
40	41	4.956075	TCTGGCTTTTCTCAAGTTTTTCCT	59.044	37.500	0.00	0.00	0.00	3.36
41	42	5.043903	GTCTGGCTTTTCTCAAGTTTTTCC	58.956	41.667	0.00	0.00	0.00	3.13
42	43	5.043903	GGTCTGGCTTTTCTCAAGTTTTTC	58.956	41.667	0.00	0.00	0.00	2.29
43	44	4.711846	AGGTCTGGCTTTTCTCAAGTTTTT	59.288	37.500	0.00	0.00	0.00	1.94
44	45	4.098501	CAGGTCTGGCTTTTCTCAAGTTTT	59.901	41.667	0.00	0.00	0.00	2.43
45	46	3.633986	CAGGTCTGGCTTTTCTCAAGTTT	59.366	43.478	0.00	0.00	0.00	2.66
46	47	3.217626	CAGGTCTGGCTTTTCTCAAGTT	58.782	45.455	0.00	0.00	0.00	2.66
47	48	2.487986	CCAGGTCTGGCTTTTCTCAAGT	60.488	50.000	3.86	0.00	44.73	3.16
48	49	2.157738	CCAGGTCTGGCTTTTCTCAAG	58.842	52.381	3.86	0.00	44.73	3.02
49	50	2.276732	CCAGGTCTGGCTTTTCTCAA	57.723	50.000	3.86	0.00	44.73	3.02
68	69	7.148069	CCAGTTGTCCATATTTTAGGAACCTTC	60.148	40.741	0.00	0.00	35.29	3.46
69	70	6.663523	CCAGTTGTCCATATTTTAGGAACCTT	59.336	38.462	0.00	0.00	35.29	3.50
70	71	6.187682	CCAGTTGTCCATATTTTAGGAACCT	58.812	40.000	0.00	0.00	35.29	3.50
71	72	5.949952	ACCAGTTGTCCATATTTTAGGAACC	59.050	40.000	0.00	0.00	35.29	3.62
72	73	7.462571	AACCAGTTGTCCATATTTTAGGAAC	57.537	36.000	0.00	0.00	35.29	3.62
73	74	9.403583	GATAACCAGTTGTCCATATTTTAGGAA	57.596	33.333	0.00	0.00	35.29	3.36
74	75	8.553153	TGATAACCAGTTGTCCATATTTTAGGA	58.447	33.333	5.03	0.00	30.85	2.94
75	76	8.746052	TGATAACCAGTTGTCCATATTTTAGG	57.254	34.615	5.03	0.00	30.85	2.69
76	77	9.613428	TCTGATAACCAGTTGTCCATATTTTAG	57.387	33.333	5.03	0.00	43.38	1.85
77	78	9.967451	TTCTGATAACCAGTTGTCCATATTTTA	57.033	29.630	5.03	0.00	43.38	1.52
78	79	8.739972	GTTCTGATAACCAGTTGTCCATATTTT	58.260	33.333	5.03	0.00	43.38	1.82
79	80	7.339466	GGTTCTGATAACCAGTTGTCCATATTT	59.661	37.037	5.03	0.00	43.38	1.40
80	81	6.828785	GGTTCTGATAACCAGTTGTCCATATT	59.171	38.462	5.03	0.00	43.38	1.28
81	82	6.158695	AGGTTCTGATAACCAGTTGTCCATAT	59.841	38.462	9.44	0.00	43.38	1.78
82	83	5.487488	AGGTTCTGATAACCAGTTGTCCATA	59.513	40.000	9.44	0.00	43.38	2.74
83	84	4.289672	AGGTTCTGATAACCAGTTGTCCAT	59.710	41.667	9.44	0.00	43.38	3.41
84	85	3.650942	AGGTTCTGATAACCAGTTGTCCA	59.349	43.478	9.44	0.00	43.38	4.02
85	86	4.287766	AGGTTCTGATAACCAGTTGTCC	57.712	45.455	9.44	0.00	43.38	4.02
86	87	5.181433	GGAAAGGTTCTGATAACCAGTTGTC	59.819	44.000	9.44	0.74	43.38	3.18
87	88	5.070685	GGAAAGGTTCTGATAACCAGTTGT	58.929	41.667	9.44	0.00	43.38	3.32
88	89	4.459337	GGGAAAGGTTCTGATAACCAGTTG	59.541	45.833	9.44	0.00	43.38	3.16
89	90	4.508584	GGGGAAAGGTTCTGATAACCAGTT	60.509	45.833	9.44	3.19	43.38	3.16
90	91	3.010250	GGGGAAAGGTTCTGATAACCAGT	59.990	47.826	9.44	0.00	43.38	4.00
91	92	3.010138	TGGGGAAAGGTTCTGATAACCAG	59.990	47.826	9.44	0.00	42.69	4.00
92	93	2.990284	TGGGGAAAGGTTCTGATAACCA	59.010	45.455	9.44	0.00	42.69	3.67
93	94	3.732048	TGGGGAAAGGTTCTGATAACC	57.268	47.619	0.00	0.00	40.58	2.85
94	95	6.605471	AAAATGGGGAAAGGTTCTGATAAC	57.395	37.500	0.00	0.00	0.00	1.89
95	96	6.784969	TCAAAAATGGGGAAAGGTTCTGATAA	59.215	34.615	0.00	0.00	0.00	1.75
96	97	6.318913	TCAAAAATGGGGAAAGGTTCTGATA	58.681	36.000	0.00	0.00	0.00	2.15
97	98	5.154418	TCAAAAATGGGGAAAGGTTCTGAT	58.846	37.500	0.00	0.00	0.00	2.90
98	99	4.551671	TCAAAAATGGGGAAAGGTTCTGA	58.448	39.130	0.00	0.00	0.00	3.27
99	100	4.588528	TCTCAAAAATGGGGAAAGGTTCTG	59.411	41.667	0.00	0.00	0.00	3.02
100	101	4.814967	TCTCAAAAATGGGGAAAGGTTCT	58.185	39.130	0.00	0.00	0.00	3.01
101	102	5.545063	TTCTCAAAAATGGGGAAAGGTTC	57.455	39.130	0.00	0.00	0.00	3.62
102	103	5.606329	TGATTCTCAAAAATGGGGAAAGGTT	59.394	36.000	0.00	0.00	0.00	3.50
103	104	5.154418	TGATTCTCAAAAATGGGGAAAGGT	58.846	37.500	0.00	0.00	0.00	3.50
104	105	5.743636	TGATTCTCAAAAATGGGGAAAGG	57.256	39.130	0.00	0.00	0.00	3.11
105	106	6.343703	GGATGATTCTCAAAAATGGGGAAAG	58.656	40.000	0.00	0.00	0.00	2.62
106	107	5.105392	CGGATGATTCTCAAAAATGGGGAAA	60.105	40.000	0.00	0.00	0.00	3.13
107	108	4.402155	CGGATGATTCTCAAAAATGGGGAA	59.598	41.667	0.00	0.00	0.00	3.97
108	109	3.953612	CGGATGATTCTCAAAAATGGGGA	59.046	43.478	0.00	0.00	0.00	4.81
109	110	3.953612	TCGGATGATTCTCAAAAATGGGG	59.046	43.478	0.00	0.00	0.00	4.96
110	111	5.343249	GTTCGGATGATTCTCAAAAATGGG	58.657	41.667	0.00	0.00	0.00	4.00
111	112	5.126061	AGGTTCGGATGATTCTCAAAAATGG	59.874	40.000	0.00	0.00	0.00	3.16
112	113	6.199937	AGGTTCGGATGATTCTCAAAAATG	57.800	37.500	0.00	0.00	0.00	2.32
113	114	6.624423	CAAGGTTCGGATGATTCTCAAAAAT	58.376	36.000	0.00	0.00	0.00	1.82
114	115	5.564651	GCAAGGTTCGGATGATTCTCAAAAA	60.565	40.000	0.00	0.00	0.00	1.94
115	116	4.082787	GCAAGGTTCGGATGATTCTCAAAA	60.083	41.667	0.00	0.00	0.00	2.44
116	117	3.440173	GCAAGGTTCGGATGATTCTCAAA	59.560	43.478	0.00	0.00	0.00	2.69
117	118	3.009723	GCAAGGTTCGGATGATTCTCAA	58.990	45.455	0.00	0.00	0.00	3.02
118	119	2.632377	GCAAGGTTCGGATGATTCTCA	58.368	47.619	0.00	0.00	0.00	3.27
119	120	1.943340	GGCAAGGTTCGGATGATTCTC	59.057	52.381	0.00	0.00	0.00	2.87
120	121	1.281867	TGGCAAGGTTCGGATGATTCT	59.718	47.619	0.00	0.00	0.00	2.40
121	122	1.672881	CTGGCAAGGTTCGGATGATTC	59.327	52.381	0.00	0.00	0.00	2.52
122	123	1.281867	TCTGGCAAGGTTCGGATGATT	59.718	47.619	0.00	0.00	0.00	2.57
123	124	0.911769	TCTGGCAAGGTTCGGATGAT	59.088	50.000	0.00	0.00	0.00	2.45
124	125	0.690192	TTCTGGCAAGGTTCGGATGA	59.310	50.000	0.00	0.00	0.00	2.92
125	126	1.200020	GTTTCTGGCAAGGTTCGGATG	59.800	52.381	0.00	0.00	0.00	3.51
126	127	1.534729	GTTTCTGGCAAGGTTCGGAT	58.465	50.000	0.00	0.00	0.00	4.18
127	128	0.882927	CGTTTCTGGCAAGGTTCGGA	60.883	55.000	0.00	0.00	0.00	4.55
128	129	0.882927	TCGTTTCTGGCAAGGTTCGG	60.883	55.000	0.00	0.00	0.00	4.30
129	130	0.941542	TTCGTTTCTGGCAAGGTTCG	59.058	50.000	0.00	0.00	0.00	3.95
130	131	1.947456	AGTTCGTTTCTGGCAAGGTTC	59.053	47.619	0.00	0.00	0.00	3.62
131	132	1.947456	GAGTTCGTTTCTGGCAAGGTT	59.053	47.619	0.00	0.00	0.00	3.50
132	133	1.141053	AGAGTTCGTTTCTGGCAAGGT	59.859	47.619	0.00	0.00	0.00	3.50
133	134	1.532868	CAGAGTTCGTTTCTGGCAAGG	59.467	52.381	0.00	0.00	38.68	3.61
134	135	2.213499	ACAGAGTTCGTTTCTGGCAAG	58.787	47.619	14.63	0.00	44.96	4.01
135	136	2.325583	ACAGAGTTCGTTTCTGGCAA	57.674	45.000	14.63	0.00	44.96	4.52
136	137	2.325583	AACAGAGTTCGTTTCTGGCA	57.674	45.000	14.63	0.00	44.96	4.92
137	138	3.692791	AAAACAGAGTTCGTTTCTGGC	57.307	42.857	14.63	0.00	44.96	4.85
156	157	7.011828	CAGACTTCGTTTCTGTTCCTAAAAA	57.988	36.000	3.46	0.00	36.50	1.94
157	158	6.598753	CAGACTTCGTTTCTGTTCCTAAAA	57.401	37.500	3.46	0.00	36.50	1.52
166	167	3.664486	CGTGTCTACAGACTTCGTTTCTG	59.336	47.826	10.55	8.51	44.99	3.02
167	168	3.852572	GCGTGTCTACAGACTTCGTTTCT	60.853	47.826	19.70	0.00	44.99	2.52
168	169	2.404361	GCGTGTCTACAGACTTCGTTTC	59.596	50.000	19.70	7.83	44.99	2.78
169	170	2.034305	AGCGTGTCTACAGACTTCGTTT	59.966	45.455	19.70	11.47	44.99	3.60
170	171	1.607628	AGCGTGTCTACAGACTTCGTT	59.392	47.619	19.70	14.87	44.99	3.85
171	172	1.236628	AGCGTGTCTACAGACTTCGT	58.763	50.000	19.70	10.32	44.99	3.85
172	173	2.771689	GTAGCGTGTCTACAGACTTCG	58.228	52.381	10.55	14.27	45.47	3.79
180	181	5.462398	CCATTTAGATTGGTAGCGTGTCTAC	59.538	44.000	1.67	0.00	45.44	2.59
181	182	5.452776	CCCATTTAGATTGGTAGCGTGTCTA	60.453	44.000	0.00	0.00	31.99	2.59
182	183	4.442706	CCATTTAGATTGGTAGCGTGTCT	58.557	43.478	0.00	0.00	0.00	3.41
183	184	3.560068	CCCATTTAGATTGGTAGCGTGTC	59.440	47.826	0.00	0.00	31.99	3.67
184	185	3.541632	CCCATTTAGATTGGTAGCGTGT	58.458	45.455	0.00	0.00	31.99	4.49
185	186	2.290641	GCCCATTTAGATTGGTAGCGTG	59.709	50.000	0.00	0.00	31.99	5.34
186	187	2.572290	GCCCATTTAGATTGGTAGCGT	58.428	47.619	0.00	0.00	31.99	5.07
187	188	1.880027	GGCCCATTTAGATTGGTAGCG	59.120	52.381	0.00	0.00	31.99	4.26
188	189	2.944129	TGGCCCATTTAGATTGGTAGC	58.056	47.619	0.00	0.00	31.99	3.58
189	190	3.315191	CGTTGGCCCATTTAGATTGGTAG	59.685	47.826	0.00	0.00	31.99	3.18
190	191	3.054287	TCGTTGGCCCATTTAGATTGGTA	60.054	43.478	0.00	0.00	31.99	3.25
191	192	2.099405	CGTTGGCCCATTTAGATTGGT	58.901	47.619	0.00	0.00	31.99	3.67
192	193	2.358898	CTCGTTGGCCCATTTAGATTGG	59.641	50.000	0.00	0.00	0.00	3.16
193	194	2.223572	GCTCGTTGGCCCATTTAGATTG	60.224	50.000	0.00	0.00	0.00	2.67
194	195	2.024414	GCTCGTTGGCCCATTTAGATT	58.976	47.619	0.00	0.00	0.00	2.40
195	196	1.212935	AGCTCGTTGGCCCATTTAGAT	59.787	47.619	0.00	0.00	0.00	1.98
196	197	0.618458	AGCTCGTTGGCCCATTTAGA	59.382	50.000	0.00	0.00	0.00	2.10
197	198	0.734889	CAGCTCGTTGGCCCATTTAG	59.265	55.000	0.00	0.00	0.00	1.85
198	199	0.326595	TCAGCTCGTTGGCCCATTTA	59.673	50.000	0.00	0.00	0.00	1.40
199	200	0.962356	CTCAGCTCGTTGGCCCATTT	60.962	55.000	0.00	0.00	0.00	2.32
200	201	1.377725	CTCAGCTCGTTGGCCCATT	60.378	57.895	0.00	0.00	0.00	3.16
201	202	2.270205	CTCAGCTCGTTGGCCCAT	59.730	61.111	0.00	0.00	0.00	4.00
202	203	3.240134	GACTCAGCTCGTTGGCCCA	62.240	63.158	0.00	0.00	0.00	5.36
203	204	2.435059	GACTCAGCTCGTTGGCCC	60.435	66.667	0.00	0.00	0.00	5.80
204	205	2.811317	CGACTCAGCTCGTTGGCC	60.811	66.667	0.00	0.00	0.00	5.36
205	206	3.482783	GCGACTCAGCTCGTTGGC	61.483	66.667	0.00	0.00	35.99	4.52
206	207	2.259818	AGCGACTCAGCTCGTTGG	59.740	61.111	0.00	0.00	45.67	3.77
226	227	2.493973	GGAGACTCAGCTCGCCAG	59.506	66.667	4.53	0.00	35.74	4.85
227	228	3.443925	CGGAGACTCAGCTCGCCA	61.444	66.667	4.53	0.00	35.74	5.69
228	229	3.444805	ACGGAGACTCAGCTCGCC	61.445	66.667	4.53	0.00	35.74	5.54
229	230	2.202544	CACGGAGACTCAGCTCGC	60.203	66.667	4.53	0.00	35.74	5.03
230	231	2.202544	GCACGGAGACTCAGCTCG	60.203	66.667	4.53	1.01	35.74	5.03
231	232	2.183046	GGCACGGAGACTCAGCTC	59.817	66.667	4.53	0.00	0.00	4.09
232	233	2.601666	TGGCACGGAGACTCAGCT	60.602	61.111	4.53	0.00	0.00	4.24
233	234	2.125753	CTGGCACGGAGACTCAGC	60.126	66.667	4.53	5.10	36.31	4.26
234	235	3.686760	TCTGGCACGGAGACTCAG	58.313	61.111	4.53	2.51	39.80	3.35
242	243	2.436646	GGGTCACATCTGGCACGG	60.437	66.667	0.00	0.00	0.00	4.94
243	244	0.677731	AATGGGTCACATCTGGCACG	60.678	55.000	0.00	0.00	39.40	5.34
244	245	1.203052	CAAATGGGTCACATCTGGCAC	59.797	52.381	0.00	0.00	39.40	5.01
245	246	1.203038	ACAAATGGGTCACATCTGGCA	60.203	47.619	0.00	0.00	39.40	4.92
246	247	1.474077	GACAAATGGGTCACATCTGGC	59.526	52.381	0.00	0.00	39.40	4.85
247	248	1.739466	CGACAAATGGGTCACATCTGG	59.261	52.381	0.00	0.00	39.40	3.86
248	249	1.131126	GCGACAAATGGGTCACATCTG	59.869	52.381	0.00	0.00	39.40	2.90
249	250	1.271325	TGCGACAAATGGGTCACATCT	60.271	47.619	0.00	0.00	39.40	2.90
250	251	1.131126	CTGCGACAAATGGGTCACATC	59.869	52.381	0.00	0.00	39.40	3.06
251	252	1.167851	CTGCGACAAATGGGTCACAT	58.832	50.000	0.00	0.00	43.07	3.21
252	253	1.514678	GCTGCGACAAATGGGTCACA	61.515	55.000	0.00	0.00	37.66	3.58
253	254	1.210155	GCTGCGACAAATGGGTCAC	59.790	57.895	0.00	0.00	37.66	3.67
254	255	0.608856	ATGCTGCGACAAATGGGTCA	60.609	50.000	0.00	0.00	37.66	4.02
255	256	0.179156	CATGCTGCGACAAATGGGTC	60.179	55.000	0.00	0.00	34.42	4.46
256	257	0.895100	ACATGCTGCGACAAATGGGT	60.895	50.000	0.00	0.00	0.00	4.51
257	258	1.064505	CTACATGCTGCGACAAATGGG	59.935	52.381	0.00	0.00	0.00	4.00
258	259	2.009051	TCTACATGCTGCGACAAATGG	58.991	47.619	0.00	0.00	0.00	3.16
259	260	3.745332	TTCTACATGCTGCGACAAATG	57.255	42.857	0.00	0.00	0.00	2.32
260	261	4.970662	ATTTCTACATGCTGCGACAAAT	57.029	36.364	0.00	0.00	0.00	2.32
261	262	4.332543	CCTATTTCTACATGCTGCGACAAA	59.667	41.667	0.00	0.00	0.00	2.83
262	263	3.871006	CCTATTTCTACATGCTGCGACAA	59.129	43.478	0.00	0.00	0.00	3.18
263	264	3.132111	TCCTATTTCTACATGCTGCGACA	59.868	43.478	0.00	0.00	0.00	4.35
264	265	3.717707	TCCTATTTCTACATGCTGCGAC	58.282	45.455	0.00	0.00	0.00	5.19
265	266	4.400529	TTCCTATTTCTACATGCTGCGA	57.599	40.909	0.00	0.00	0.00	5.10
266	267	5.446709	CATTTCCTATTTCTACATGCTGCG	58.553	41.667	0.00	0.00	0.00	5.18
267	268	5.218139	GCATTTCCTATTTCTACATGCTGC	58.782	41.667	0.00	0.00	34.10	5.25
268	269	5.300034	TGGCATTTCCTATTTCTACATGCTG	59.700	40.000	0.00	0.00	36.59	4.41
269	270	5.300286	GTGGCATTTCCTATTTCTACATGCT	59.700	40.000	0.00	0.00	36.59	3.79
270	271	5.300286	AGTGGCATTTCCTATTTCTACATGC	59.700	40.000	0.00	0.00	35.79	4.06
271	272	6.949352	AGTGGCATTTCCTATTTCTACATG	57.051	37.500	0.00	0.00	35.26	3.21
272	273	7.961326	AAAGTGGCATTTCCTATTTCTACAT	57.039	32.000	0.00	0.00	35.26	2.29
273	274	7.361713	CGAAAAGTGGCATTTCCTATTTCTACA	60.362	37.037	7.74	0.00	34.10	2.74
274	275	6.967199	CGAAAAGTGGCATTTCCTATTTCTAC	59.033	38.462	7.74	0.00	34.10	2.59
275	276	6.882140	TCGAAAAGTGGCATTTCCTATTTCTA	59.118	34.615	7.74	0.00	34.10	2.10
276	277	5.710099	TCGAAAAGTGGCATTTCCTATTTCT	59.290	36.000	7.74	0.00	34.10	2.52
277	278	5.949735	TCGAAAAGTGGCATTTCCTATTTC	58.050	37.500	7.74	2.07	34.10	2.17
278	279	5.975693	TCGAAAAGTGGCATTTCCTATTT	57.024	34.783	7.74	0.00	34.10	1.40
279	280	6.152661	TGAATCGAAAAGTGGCATTTCCTATT	59.847	34.615	7.74	7.78	34.10	1.73
280	281	5.652014	TGAATCGAAAAGTGGCATTTCCTAT	59.348	36.000	7.74	0.86	34.10	2.57
281	282	5.007034	TGAATCGAAAAGTGGCATTTCCTA	58.993	37.500	7.74	0.00	34.10	2.94
282	283	3.826157	TGAATCGAAAAGTGGCATTTCCT	59.174	39.130	7.74	0.00	34.10	3.36
283	284	3.920412	GTGAATCGAAAAGTGGCATTTCC	59.080	43.478	7.74	0.00	34.10	3.13
284	285	4.545610	TGTGAATCGAAAAGTGGCATTTC	58.454	39.130	0.00	0.00	34.25	2.17
285	286	4.582701	TGTGAATCGAAAAGTGGCATTT	57.417	36.364	0.00	0.00	0.00	2.32
286	287	4.789012	ATGTGAATCGAAAAGTGGCATT	57.211	36.364	0.00	0.00	0.00	3.56
287	288	4.460382	AGAATGTGAATCGAAAAGTGGCAT	59.540	37.500	0.00	0.00	0.00	4.40
288	289	3.820467	AGAATGTGAATCGAAAAGTGGCA	59.180	39.130	0.00	0.00	0.00	4.92
289	290	4.425577	AGAATGTGAATCGAAAAGTGGC	57.574	40.909	0.00	0.00	0.00	5.01
290	291	7.364522	TCTAAGAATGTGAATCGAAAAGTGG	57.635	36.000	0.00	0.00	0.00	4.00
291	292	8.712363	TCTTCTAAGAATGTGAATCGAAAAGTG	58.288	33.333	0.00	0.00	30.73	3.16
292	293	8.833231	TCTTCTAAGAATGTGAATCGAAAAGT	57.167	30.769	0.00	0.00	30.73	2.66
295	296	8.721478	CCTTTCTTCTAAGAATGTGAATCGAAA	58.279	33.333	6.01	0.00	43.92	3.46
296	297	7.148407	GCCTTTCTTCTAAGAATGTGAATCGAA	60.148	37.037	6.01	0.00	43.92	3.71
297	298	6.313905	GCCTTTCTTCTAAGAATGTGAATCGA	59.686	38.462	6.01	0.00	43.92	3.59
298	299	6.314896	AGCCTTTCTTCTAAGAATGTGAATCG	59.685	38.462	6.01	0.00	43.92	3.34
299	300	7.335422	TGAGCCTTTCTTCTAAGAATGTGAATC	59.665	37.037	6.01	4.93	43.92	2.52
300	301	7.170965	TGAGCCTTTCTTCTAAGAATGTGAAT	58.829	34.615	6.01	0.00	43.92	2.57
301	302	6.533730	TGAGCCTTTCTTCTAAGAATGTGAA	58.466	36.000	6.01	0.00	43.92	3.18
302	303	6.114187	TGAGCCTTTCTTCTAAGAATGTGA	57.886	37.500	6.01	0.00	43.92	3.58
303	304	6.677431	GCATGAGCCTTTCTTCTAAGAATGTG	60.677	42.308	6.01	4.48	38.65	3.21
304	305	5.356470	GCATGAGCCTTTCTTCTAAGAATGT	59.644	40.000	6.01	0.00	38.65	2.71
305	306	5.819059	GCATGAGCCTTTCTTCTAAGAATG	58.181	41.667	6.01	8.31	38.65	2.67
321	322	2.825836	CGGAACTGGGGCATGAGC	60.826	66.667	0.00	0.00	41.10	4.26
322	323	1.002134	AACGGAACTGGGGCATGAG	60.002	57.895	0.00	0.00	0.00	2.90
323	324	1.002624	GAACGGAACTGGGGCATGA	60.003	57.895	0.00	0.00	0.00	3.07
324	325	0.680921	ATGAACGGAACTGGGGCATG	60.681	55.000	0.00	0.00	0.00	4.06
325	326	0.916086	TATGAACGGAACTGGGGCAT	59.084	50.000	0.00	0.00	0.00	4.40
326	327	0.693622	TTATGAACGGAACTGGGGCA	59.306	50.000	0.00	0.00	0.00	5.36
327	328	1.676006	CATTATGAACGGAACTGGGGC	59.324	52.381	0.00	0.00	0.00	5.80
328	329	3.275617	TCATTATGAACGGAACTGGGG	57.724	47.619	0.00	0.00	0.00	4.96
329	330	4.142469	GGTTTCATTATGAACGGAACTGGG	60.142	45.833	7.19	0.00	35.89	4.45
330	331	4.457603	TGGTTTCATTATGAACGGAACTGG	59.542	41.667	7.19	0.00	35.89	4.00
331	332	5.621197	TGGTTTCATTATGAACGGAACTG	57.379	39.130	7.19	0.00	35.89	3.16
332	333	6.264518	ACTTTGGTTTCATTATGAACGGAACT	59.735	34.615	7.19	0.00	35.89	3.01
333	334	6.443792	ACTTTGGTTTCATTATGAACGGAAC	58.556	36.000	7.19	3.27	35.89	3.62
334	335	6.642707	ACTTTGGTTTCATTATGAACGGAA	57.357	33.333	7.19	0.00	35.89	4.30
335	336	7.446013	AGTTACTTTGGTTTCATTATGAACGGA	59.554	33.333	7.19	0.00	35.89	4.69
336	337	7.590279	AGTTACTTTGGTTTCATTATGAACGG	58.410	34.615	7.19	0.00	35.89	4.44
337	338	9.458374	AAAGTTACTTTGGTTTCATTATGAACG	57.542	29.630	9.77	0.00	32.42	3.95
343	344	9.186837	TGGTGTAAAGTTACTTTGGTTTCATTA	57.813	29.630	19.32	0.00	35.21	1.90
344	345	8.068892	TGGTGTAAAGTTACTTTGGTTTCATT	57.931	30.769	19.32	0.00	35.21	2.57
345	346	7.558444	TCTGGTGTAAAGTTACTTTGGTTTCAT	59.442	33.333	19.32	0.00	35.21	2.57
346	347	6.885376	TCTGGTGTAAAGTTACTTTGGTTTCA	59.115	34.615	19.32	10.31	35.21	2.69
347	348	7.324354	TCTGGTGTAAAGTTACTTTGGTTTC	57.676	36.000	19.32	6.79	35.21	2.78
348	349	7.706100	TTCTGGTGTAAAGTTACTTTGGTTT	57.294	32.000	19.32	0.00	35.21	3.27
349	350	7.778382	AGATTCTGGTGTAAAGTTACTTTGGTT	59.222	33.333	19.32	0.00	35.21	3.67
350	351	7.287810	AGATTCTGGTGTAAAGTTACTTTGGT	58.712	34.615	19.32	0.00	35.21	3.67
351	352	7.094762	GGAGATTCTGGTGTAAAGTTACTTTGG	60.095	40.741	19.32	4.20	35.21	3.28
352	353	7.094762	GGGAGATTCTGGTGTAAAGTTACTTTG	60.095	40.741	19.32	2.81	35.21	2.77
353	354	6.940867	GGGAGATTCTGGTGTAAAGTTACTTT	59.059	38.462	14.99	14.99	37.46	2.66
354	355	6.043938	TGGGAGATTCTGGTGTAAAGTTACTT	59.956	38.462	0.00	0.00	34.77	2.24
355	356	5.546499	TGGGAGATTCTGGTGTAAAGTTACT	59.454	40.000	0.00	0.00	34.77	2.24
356	357	5.801380	TGGGAGATTCTGGTGTAAAGTTAC	58.199	41.667	0.00	0.00	0.00	2.50
357	358	6.235664	GTTGGGAGATTCTGGTGTAAAGTTA	58.764	40.000	0.00	0.00	0.00	2.24
358	359	4.993705	TGGGAGATTCTGGTGTAAAGTT	57.006	40.909	0.00	0.00	0.00	2.66
359	360	4.652822	GTTGGGAGATTCTGGTGTAAAGT	58.347	43.478	0.00	0.00	0.00	2.66
360	361	3.684788	CGTTGGGAGATTCTGGTGTAAAG	59.315	47.826	0.00	0.00	0.00	1.85
361	362	3.325425	TCGTTGGGAGATTCTGGTGTAAA	59.675	43.478	0.00	0.00	0.00	2.01
362	363	2.901192	TCGTTGGGAGATTCTGGTGTAA	59.099	45.455	0.00	0.00	0.00	2.41
363	364	2.531771	TCGTTGGGAGATTCTGGTGTA	58.468	47.619	0.00	0.00	0.00	2.90
364	365	1.348064	TCGTTGGGAGATTCTGGTGT	58.652	50.000	0.00	0.00	0.00	4.16
365	366	2.472695	TTCGTTGGGAGATTCTGGTG	57.527	50.000	0.00	0.00	0.00	4.17
366	367	2.105821	TGTTTCGTTGGGAGATTCTGGT	59.894	45.455	0.00	0.00	0.00	4.00
367	368	2.744202	CTGTTTCGTTGGGAGATTCTGG	59.256	50.000	0.00	0.00	0.00	3.86
368	369	2.744202	CCTGTTTCGTTGGGAGATTCTG	59.256	50.000	0.00	0.00	0.00	3.02
369	370	2.290323	CCCTGTTTCGTTGGGAGATTCT	60.290	50.000	0.00	0.00	43.47	2.40
370	371	2.084546	CCCTGTTTCGTTGGGAGATTC	58.915	52.381	0.00	0.00	43.47	2.52
371	372	1.271926	CCCCTGTTTCGTTGGGAGATT	60.272	52.381	0.00	0.00	43.47	2.40
372	373	0.328258	CCCCTGTTTCGTTGGGAGAT	59.672	55.000	0.00	0.00	43.47	2.75
373	374	1.758592	CCCCTGTTTCGTTGGGAGA	59.241	57.895	0.00	0.00	43.47	3.71
374	375	1.303317	CCCCCTGTTTCGTTGGGAG	60.303	63.158	0.00	0.00	43.47	4.30
375	376	1.770927	TCCCCCTGTTTCGTTGGGA	60.771	57.895	0.00	0.00	43.47	4.37
376	377	1.303317	CTCCCCCTGTTTCGTTGGG	60.303	63.158	0.00	0.00	40.59	4.12
377	378	0.109723	TTCTCCCCCTGTTTCGTTGG	59.890	55.000	0.00	0.00	0.00	3.77
378	379	1.523758	CTTCTCCCCCTGTTTCGTTG	58.476	55.000	0.00	0.00	0.00	4.10
379	380	0.250770	GCTTCTCCCCCTGTTTCGTT	60.251	55.000	0.00	0.00	0.00	3.85
380	381	1.375326	GCTTCTCCCCCTGTTTCGT	59.625	57.895	0.00	0.00	0.00	3.85
381	382	0.250727	TTGCTTCTCCCCCTGTTTCG	60.251	55.000	0.00	0.00	0.00	3.46
382	383	1.613925	GTTTGCTTCTCCCCCTGTTTC	59.386	52.381	0.00	0.00	0.00	2.78
383	384	1.063266	TGTTTGCTTCTCCCCCTGTTT	60.063	47.619	0.00	0.00	0.00	2.83
384	385	0.555769	TGTTTGCTTCTCCCCCTGTT	59.444	50.000	0.00	0.00	0.00	3.16
385	386	0.178990	GTGTTTGCTTCTCCCCCTGT	60.179	55.000	0.00	0.00	0.00	4.00
386	387	0.895559	GGTGTTTGCTTCTCCCCCTG	60.896	60.000	0.00	0.00	0.00	4.45
387	388	1.360393	TGGTGTTTGCTTCTCCCCCT	61.360	55.000	0.00	0.00	0.00	4.79
388	389	0.469144	TTGGTGTTTGCTTCTCCCCC	60.469	55.000	0.00	0.00	0.00	5.40
389	390	1.341209	CTTTGGTGTTTGCTTCTCCCC	59.659	52.381	0.00	0.00	0.00	4.81
390	391	1.269778	GCTTTGGTGTTTGCTTCTCCC	60.270	52.381	0.00	0.00	0.00	4.30
391	392	1.408702	TGCTTTGGTGTTTGCTTCTCC	59.591	47.619	0.00	0.00	0.00	3.71
392	393	2.099756	ACTGCTTTGGTGTTTGCTTCTC	59.900	45.455	0.00	0.00	0.00	2.87
393	394	2.099756	GACTGCTTTGGTGTTTGCTTCT	59.900	45.455	0.00	0.00	0.00	2.85
394	395	2.099756	AGACTGCTTTGGTGTTTGCTTC	59.900	45.455	0.00	0.00	0.00	3.86
395	396	2.099756	GAGACTGCTTTGGTGTTTGCTT	59.900	45.455	0.00	0.00	0.00	3.91
396	397	1.678101	GAGACTGCTTTGGTGTTTGCT	59.322	47.619	0.00	0.00	0.00	3.91
397	398	1.405105	TGAGACTGCTTTGGTGTTTGC	59.595	47.619	0.00	0.00	0.00	3.68
398	399	2.542411	GCTGAGACTGCTTTGGTGTTTG	60.542	50.000	0.00	0.00	0.00	2.93
399	400	1.678101	GCTGAGACTGCTTTGGTGTTT	59.322	47.619	0.00	0.00	0.00	2.83
400	401	1.312815	GCTGAGACTGCTTTGGTGTT	58.687	50.000	0.00	0.00	0.00	3.32
401	402	0.536006	GGCTGAGACTGCTTTGGTGT	60.536	55.000	0.00	0.00	0.00	4.16
402	403	0.535780	TGGCTGAGACTGCTTTGGTG	60.536	55.000	0.00	0.00	0.00	4.17
403	404	0.183492	TTGGCTGAGACTGCTTTGGT	59.817	50.000	0.00	0.00	0.00	3.67
404	405	1.542492	ATTGGCTGAGACTGCTTTGG	58.458	50.000	0.00	0.00	0.00	3.28
405	406	3.255149	AGAAATTGGCTGAGACTGCTTTG	59.745	43.478	0.00	0.00	0.00	2.77
406	407	3.494332	AGAAATTGGCTGAGACTGCTTT	58.506	40.909	0.00	0.00	0.00	3.51
407	408	3.151912	AGAAATTGGCTGAGACTGCTT	57.848	42.857	0.00	0.00	0.00	3.91
408	409	2.875094	AGAAATTGGCTGAGACTGCT	57.125	45.000	0.00	0.00	0.00	4.24
409	410	3.080319	AGAAGAAATTGGCTGAGACTGC	58.920	45.455	0.00	0.00	0.00	4.40
410	411	4.070716	ACAGAAGAAATTGGCTGAGACTG	58.929	43.478	0.00	0.00	32.86	3.51
411	412	4.070716	CACAGAAGAAATTGGCTGAGACT	58.929	43.478	0.00	0.00	32.86	3.24
412	413	3.817647	ACACAGAAGAAATTGGCTGAGAC	59.182	43.478	0.00	0.00	32.86	3.36
413	414	4.090761	ACACAGAAGAAATTGGCTGAGA	57.909	40.909	0.00	0.00	32.86	3.27
414	415	4.518211	AGAACACAGAAGAAATTGGCTGAG	59.482	41.667	0.00	0.00	32.86	3.35
415	416	4.464008	AGAACACAGAAGAAATTGGCTGA	58.536	39.130	0.00	0.00	32.86	4.26
416	417	4.843220	AGAACACAGAAGAAATTGGCTG	57.157	40.909	0.00	0.00	34.65	4.85
417	418	5.859205	AAAGAACACAGAAGAAATTGGCT	57.141	34.783	0.00	0.00	0.00	4.75
418	419	6.908870	AAAAAGAACACAGAAGAAATTGGC	57.091	33.333	0.00	0.00	0.00	4.52
512	514	8.246430	AGGTGTCCGAAACTATATCTCATTTA	57.754	34.615	0.00	0.00	0.00	1.40
522	524	1.131883	CGTCGAGGTGTCCGAAACTAT	59.868	52.381	0.00	0.00	37.81	2.12
531	533	1.126846	CAGATTTTGCGTCGAGGTGTC	59.873	52.381	7.01	0.00	0.00	3.67
541	543	3.663908	GTCTTCATCGTCAGATTTTGCG	58.336	45.455	0.00	0.00	34.23	4.85
543	545	3.679980	ACCGTCTTCATCGTCAGATTTTG	59.320	43.478	0.00	0.00	34.23	2.44
544	546	3.926616	ACCGTCTTCATCGTCAGATTTT	58.073	40.909	0.00	0.00	34.23	1.82
554	558	4.457949	ACCAAATACCAAACCGTCTTCATC	59.542	41.667	0.00	0.00	0.00	2.92
560	564	3.994204	AACACCAAATACCAAACCGTC	57.006	42.857	0.00	0.00	0.00	4.79
577	581	5.818336	TCTCTTAAATCGTGTGTCCAAAACA	59.182	36.000	0.00	0.00	34.78	2.83
578	582	6.295039	TCTCTTAAATCGTGTGTCCAAAAC	57.705	37.500	0.00	0.00	0.00	2.43
579	583	6.928979	TTCTCTTAAATCGTGTGTCCAAAA	57.071	33.333	0.00	0.00	0.00	2.44
580	584	6.928979	TTTCTCTTAAATCGTGTGTCCAAA	57.071	33.333	0.00	0.00	0.00	3.28
581	585	6.316640	TGTTTTCTCTTAAATCGTGTGTCCAA	59.683	34.615	0.00	0.00	0.00	3.53
585	589	6.920569	AGTGTTTTCTCTTAAATCGTGTGT	57.079	33.333	0.00	0.00	0.00	3.72
586	590	7.908082	TCAAAGTGTTTTCTCTTAAATCGTGTG	59.092	33.333	0.00	0.00	33.93	3.82
587	591	7.981142	TCAAAGTGTTTTCTCTTAAATCGTGT	58.019	30.769	0.00	0.00	33.93	4.49
588	592	8.835467	TTCAAAGTGTTTTCTCTTAAATCGTG	57.165	30.769	0.00	0.00	33.93	4.35
590	594	9.663904	TCATTCAAAGTGTTTTCTCTTAAATCG	57.336	29.630	0.00	0.00	33.93	3.34
593	597	9.284594	CGTTCATTCAAAGTGTTTTCTCTTAAA	57.715	29.630	0.00	0.00	33.93	1.52
594	598	8.670135	TCGTTCATTCAAAGTGTTTTCTCTTAA	58.330	29.630	0.00	0.00	33.93	1.85
595	599	8.203937	TCGTTCATTCAAAGTGTTTTCTCTTA	57.796	30.769	0.00	0.00	33.93	2.10
596	600	7.083875	TCGTTCATTCAAAGTGTTTTCTCTT	57.916	32.000	0.00	0.00	35.51	2.85
600	604	7.914537	AGATTCGTTCATTCAAAGTGTTTTC	57.085	32.000	0.00	0.00	0.00	2.29
639	645	6.477033	CACTCTACATCTTCTCGTAATTTGGG	59.523	42.308	0.00	0.00	0.00	4.12
643	649	6.603997	AGACCACTCTACATCTTCTCGTAATT	59.396	38.462	0.00	0.00	0.00	1.40
647	653	3.958018	AGACCACTCTACATCTTCTCGT	58.042	45.455	0.00	0.00	0.00	4.18
655	661	4.074970	CCTTTGCAAAGACCACTCTACAT	58.925	43.478	35.25	0.00	38.28	2.29
673	679	7.257419	AGATCACCATCTTAAAGGTTACCCTTT	60.257	37.037	9.49	9.49	44.82	3.11
674	680	6.217693	AGATCACCATCTTAAAGGTTACCCTT	59.782	38.462	0.00	0.00	44.10	3.95
675	681	5.731678	AGATCACCATCTTAAAGGTTACCCT	59.268	40.000	0.00	0.00	38.39	4.34
676	682	6.002653	AGATCACCATCTTAAAGGTTACCC	57.997	41.667	0.00	0.00	35.67	3.69
677	683	6.890293	AGAGATCACCATCTTAAAGGTTACC	58.110	40.000	0.00	0.00	39.71	2.85
680	686	9.454859	CTTAAAGAGATCACCATCTTAAAGGTT	57.545	33.333	0.00	0.00	39.71	3.50
681	687	8.606830	ACTTAAAGAGATCACCATCTTAAAGGT	58.393	33.333	0.00	0.00	39.71	3.50
686	692	9.475620	TCACTACTTAAAGAGATCACCATCTTA	57.524	33.333	0.00	0.00	39.71	2.10
687	693	8.367660	TCACTACTTAAAGAGATCACCATCTT	57.632	34.615	0.00	0.00	39.71	2.40
688	694	7.962995	TCACTACTTAAAGAGATCACCATCT	57.037	36.000	0.00	0.00	42.59	2.90
689	695	8.637986	AGATCACTACTTAAAGAGATCACCATC	58.362	37.037	13.63	0.00	42.60	3.51
690	696	8.546083	AGATCACTACTTAAAGAGATCACCAT	57.454	34.615	13.63	0.00	42.60	3.55
691	697	7.201741	CGAGATCACTACTTAAAGAGATCACCA	60.202	40.741	13.63	0.00	42.60	4.17
692	698	7.136119	CGAGATCACTACTTAAAGAGATCACC	58.864	42.308	13.63	6.94	42.60	4.02
693	699	7.699566	ACGAGATCACTACTTAAAGAGATCAC	58.300	38.462	13.63	8.60	42.60	3.06
694	700	7.867305	ACGAGATCACTACTTAAAGAGATCA	57.133	36.000	13.63	0.00	42.60	2.92
695	701	8.500773	CCTACGAGATCACTACTTAAAGAGATC	58.499	40.741	6.52	6.52	41.31	2.75
696	702	8.212312	TCCTACGAGATCACTACTTAAAGAGAT	58.788	37.037	0.00	0.00	30.64	2.75
697	703	7.495279	GTCCTACGAGATCACTACTTAAAGAGA	59.505	40.741	0.00	0.00	0.00	3.10
698	704	7.254863	GGTCCTACGAGATCACTACTTAAAGAG	60.255	44.444	0.00	0.00	0.00	2.85
699	705	6.541641	GGTCCTACGAGATCACTACTTAAAGA	59.458	42.308	0.00	0.00	0.00	2.52
706	712	3.242673	CGTTGGTCCTACGAGATCACTAC	60.243	52.174	19.47	0.00	41.33	2.73
710	716	2.118313	TCGTTGGTCCTACGAGATCA	57.882	50.000	22.20	2.55	42.51	2.92
721	727	1.144969	TTCAATCGTGCTCGTTGGTC	58.855	50.000	17.17	0.00	38.33	4.02
722	728	1.588674	TTTCAATCGTGCTCGTTGGT	58.411	45.000	17.17	0.18	38.33	3.67
723	729	2.286713	TGTTTTCAATCGTGCTCGTTGG	60.287	45.455	17.17	5.72	38.33	3.77
724	730	2.980586	TGTTTTCAATCGTGCTCGTTG	58.019	42.857	8.17	11.50	38.33	4.10
725	731	3.684103	TTGTTTTCAATCGTGCTCGTT	57.316	38.095	8.17	0.00	35.25	3.85
726	732	3.548014	CCTTTGTTTTCAATCGTGCTCGT	60.548	43.478	8.17	0.00	39.70	4.18
727	733	2.973224	CCTTTGTTTTCAATCGTGCTCG	59.027	45.455	0.81	0.81	39.70	5.03
779	785	2.483876	TGAGCAAGACAAAGACCGAAG	58.516	47.619	0.00	0.00	0.00	3.79
790	818	0.947244	CGGCCCAATATGAGCAAGAC	59.053	55.000	0.00	0.00	0.00	3.01
797	825	1.728323	TCCATCTCGGCCCAATATGA	58.272	50.000	0.00	0.00	33.14	2.15
808	836	2.350772	GGCCGCATTAATTTCCATCTCG	60.351	50.000	0.00	0.00	0.00	4.04
816	844	3.260632	AGGACAAAAGGCCGCATTAATTT	59.739	39.130	0.00	0.00	0.00	1.82
823	851	1.901464	GGAAGGACAAAAGGCCGCA	60.901	57.895	0.00	0.00	0.00	5.69
860	888	3.750371	TCCGAAATTTTTCTCAGGCAGA	58.250	40.909	0.00	0.00	35.07	4.26
949	977	3.245315	CGAGCGCGTAGGGTTTCG	61.245	66.667	8.43	0.00	44.71	3.46
1110	1138	3.302347	AAAGCCTCCGAGCGAGTGG	62.302	63.158	0.00	0.00	36.82	4.00
1112	1140	2.574399	GAAAGCCTCCGAGCGAGT	59.426	61.111	0.00	0.00	36.82	4.18
1121	1149	1.131315	GAGCAATGGTTCGAAAGCCTC	59.869	52.381	0.00	0.00	0.00	4.70
1189	1217	6.813649	TCTCGACTCAATTAACTGATCCAAAG	59.186	38.462	0.00	0.00	0.00	2.77
1198	1226	4.688021	GAGCCATCTCGACTCAATTAACT	58.312	43.478	0.00	0.00	0.00	2.24
1222	1250	2.627699	TCAAGGCCCTAAGCAACTTTTG	59.372	45.455	0.00	0.00	46.50	2.44
1226	1254	2.675658	TTTCAAGGCCCTAAGCAACT	57.324	45.000	0.00	0.00	46.50	3.16
1240	1268	1.609580	CCACGAACTCCCCGATTTCAA	60.610	52.381	0.00	0.00	0.00	2.69
1315	1343	4.021229	ACACGATACACCTAACCAGATCA	58.979	43.478	0.00	0.00	0.00	2.92
1328	1356	5.209977	GCTACGAATGACATACACGATACA	58.790	41.667	13.66	0.00	0.00	2.29
1336	1364	3.886549	AGCTACGCTACGAATGACATAC	58.113	45.455	0.00	0.00	36.99	2.39
1351	1379	3.561310	TCCCATGTACGTTAGTAGCTACG	59.439	47.826	17.99	11.62	32.77	3.51
1386	1414	6.367969	ACAAAAACAACTATACTCCGTAGCTG	59.632	38.462	0.00	0.00	0.00	4.24
1399	1427	4.461081	AGACACAGCCAACAAAAACAACTA	59.539	37.500	0.00	0.00	0.00	2.24
1428	1456	9.905713	AGCACATTTCCTCTATGTCTAATTAAA	57.094	29.630	0.00	0.00	34.11	1.52
1434	1462	7.603180	ATGTAGCACATTTCCTCTATGTCTA	57.397	36.000	0.00	0.00	34.67	2.59
1465	1493	3.672511	GCCACTGAAGATCACATTTGCAG	60.673	47.826	0.00	0.00	0.00	4.41
1466	1494	2.229543	GCCACTGAAGATCACATTTGCA	59.770	45.455	0.00	0.00	0.00	4.08
1467	1495	2.416431	GGCCACTGAAGATCACATTTGC	60.416	50.000	0.00	0.00	0.00	3.68
1476	1506	1.260544	GCCAAAAGGCCACTGAAGAT	58.739	50.000	5.01	0.00	0.00	2.40
1479	1509	1.422531	AATGCCAAAAGGCCACTGAA	58.577	45.000	5.01	0.00	0.00	3.02
1484	1514	2.552591	CCAATGAAATGCCAAAAGGCCA	60.553	45.455	5.01	0.00	0.00	5.36
1592	1627	3.084536	TGCTGCAATAAGATCCACCAA	57.915	42.857	0.00	0.00	0.00	3.67
1614	1649	4.434545	ACTGGCATCTAAATGATCAGCT	57.565	40.909	0.09	0.00	38.32	4.24
1650	1685	8.787852	AGAGTTTCTTGAACCTGAAATATCAAC	58.212	33.333	0.00	0.00	39.13	3.18
1651	1686	8.924511	AGAGTTTCTTGAACCTGAAATATCAA	57.075	30.769	0.00	0.00	39.13	2.57
1652	1687	8.924511	AAGAGTTTCTTGAACCTGAAATATCA	57.075	30.769	0.00	0.00	39.13	2.15
1656	1691	9.971922	CATTTAAGAGTTTCTTGAACCTGAAAT	57.028	29.630	1.71	0.00	35.29	2.17
1657	1692	9.184523	TCATTTAAGAGTTTCTTGAACCTGAAA	57.815	29.630	1.71	0.00	35.29	2.69
1658	1693	8.746052	TCATTTAAGAGTTTCTTGAACCTGAA	57.254	30.769	1.71	0.00	35.29	3.02
1659	1694	7.993183	ACTCATTTAAGAGTTTCTTGAACCTGA	59.007	33.333	1.71	1.89	46.26	3.86
1660	1695	8.072567	CACTCATTTAAGAGTTTCTTGAACCTG	58.927	37.037	1.71	0.00	46.26	4.00
1661	1696	7.255277	GCACTCATTTAAGAGTTTCTTGAACCT	60.255	37.037	1.71	0.00	46.26	3.50
1662	1697	6.858478	GCACTCATTTAAGAGTTTCTTGAACC	59.142	38.462	1.71	0.00	46.26	3.62
1663	1698	7.417612	TGCACTCATTTAAGAGTTTCTTGAAC	58.582	34.615	1.71	0.00	46.26	3.18
1664	1699	7.566760	TGCACTCATTTAAGAGTTTCTTGAA	57.433	32.000	1.71	0.57	46.26	2.69
1665	1700	7.750229	ATGCACTCATTTAAGAGTTTCTTGA	57.250	32.000	0.00	0.00	46.26	3.02
1678	1713	5.051816	CAGGTGAAAACAATGCACTCATTT	58.948	37.500	0.00	0.00	40.74	2.32
1708	1743	3.375782	AGCAGCAACACTTTCCATTTC	57.624	42.857	0.00	0.00	0.00	2.17
1714	1749	5.409826	ACTGACTAATAGCAGCAACACTTTC	59.590	40.000	10.23	0.00	35.57	2.62
1718	1753	5.613358	AAACTGACTAATAGCAGCAACAC	57.387	39.130	10.23	0.00	35.57	3.32
1736	1771	7.944729	ATGGAAGATGTACAGCAAATAAACT	57.055	32.000	14.51	0.00	0.00	2.66
2142	2201	4.052229	GGGCAGCAACAGCAGCAG	62.052	66.667	7.14	0.00	41.91	4.24
2145	2204	3.730761	GACGGGCAGCAACAGCAG	61.731	66.667	0.00	0.00	0.00	4.24
2209	2268	3.955650	TGGAACTCTCCTACCTTTTCG	57.044	47.619	0.00	0.00	42.94	3.46
2361	2423	5.181245	GGTTGCGCATATTATATGTTCAGGT	59.819	40.000	12.75	0.00	0.00	4.00
2451	2514	0.105964	TCCAGACAGACAAACACCCG	59.894	55.000	0.00	0.00	0.00	5.28
2968	3210	7.309867	GGTTACGTCAATCTACATCCAGGATAT	60.310	40.741	0.00	0.00	0.00	1.63
3023	3265	4.903585	GCCAAGCAAAAGCGAAAATAAAAC	59.096	37.500	0.00	0.00	0.00	2.43
3216	3477	5.899120	AGAGCGTTCAGATCACTAAAGTA	57.101	39.130	1.01	0.00	37.82	2.24
3217	3478	4.792521	AGAGCGTTCAGATCACTAAAGT	57.207	40.909	1.01	0.00	37.82	2.66
3218	3479	9.469807	AATATAAGAGCGTTCAGATCACTAAAG	57.530	33.333	1.01	0.00	37.82	1.85
3219	3480	9.817809	AAATATAAGAGCGTTCAGATCACTAAA	57.182	29.630	1.01	0.00	37.82	1.85
3220	3481	9.464714	GAAATATAAGAGCGTTCAGATCACTAA	57.535	33.333	1.01	0.00	37.82	2.24
3221	3482	8.851145	AGAAATATAAGAGCGTTCAGATCACTA	58.149	33.333	1.01	0.00	37.82	2.74
3230	3491	8.756864	CCTCTGTAAAGAAATATAAGAGCGTTC	58.243	37.037	0.00	0.00	0.00	3.95
3317	3578	2.639839	ACCTTTATGTGGACAGTGAGCT	59.360	45.455	0.00	0.00	0.00	4.09
3354	3615	5.178061	TGTGTTACATGGTATTGCTCTGAG	58.822	41.667	0.00	0.00	0.00	3.35
3596	3865	7.826744	GGTAATGATCTTGAGGACTTCTTTCTT	59.173	37.037	0.00	0.00	0.00	2.52
3678	3947	1.472904	GGCTCGCCTTAAGTTACTCCC	60.473	57.143	0.97	0.00	0.00	4.30
3854	4123	1.878522	CTGGATCTGCCGTACACGC	60.879	63.158	0.00	0.00	40.66	5.34
3886	4155	7.417116	CCCTAACTCCGCTGTAAAGACTAATAA	60.417	40.741	0.00	0.00	0.00	1.40
3897	4166	0.754217	ATCGCCCTAACTCCGCTGTA	60.754	55.000	0.00	0.00	0.00	2.74
3902	4171	0.174845	TGTTCATCGCCCTAACTCCG	59.825	55.000	0.00	0.00	0.00	4.63
3982	4256	2.857748	CGCAAAACAGGAGAAACCAAAC	59.142	45.455	0.00	0.00	42.04	2.93
4008	4282	2.028020	TCACCACAGTACACACAACACA	60.028	45.455	0.00	0.00	0.00	3.72
4015	4289	2.483013	GCAGAGTTCACCACAGTACACA	60.483	50.000	0.00	0.00	0.00	3.72
4136	4410	1.464997	GGTTGAACGAGCTGACCATTC	59.535	52.381	0.00	0.00	0.00	2.67
4207	4481	8.054572	TGGTCAGGAAGATAAAATCAATCATCA	58.945	33.333	0.00	0.00	0.00	3.07
4251	4525	6.021030	TGTCCTTATACCTACCTGTTCACTT	58.979	40.000	0.00	0.00	0.00	3.16
4426	4700	7.374272	ACATGATGAGAATTATCTAGTGACGG	58.626	38.462	0.00	0.00	35.54	4.79
4448	4722	4.400884	TGCTATAAATTCCCGCAACAACAT	59.599	37.500	0.00	0.00	0.00	2.71
4518	4793	6.016360	ACACGGGCGTTATGTTAGTATACATA	60.016	38.462	5.50	0.00	39.39	2.29
4610	4885	6.269315	TGCAATTGTTACTAGTTTGTTGGTG	58.731	36.000	7.40	0.00	0.00	4.17

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.