Multiple sequence alignment - TraesCS7A01G256000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G256000 chr7A 100.000 4377 0 0 1 4377 244478661 244483037 0.000000e+00 8083.0
1 TraesCS7A01G256000 chr7A 96.000 125 5 0 738 862 162953682 162953806 2.060000e-48 204.0
2 TraesCS7A01G256000 chr7A 82.474 97 15 2 1196 1291 640550637 640550542 2.810000e-12 84.2
3 TraesCS7A01G256000 chr7B 88.747 1724 108 31 1929 3617 202824977 202826649 0.000000e+00 2030.0
4 TraesCS7A01G256000 chr7B 90.681 1116 57 27 855 1931 202823723 202824830 0.000000e+00 1441.0
5 TraesCS7A01G256000 chr7B 84.439 784 29 29 1 746 202823013 202823741 0.000000e+00 686.0
6 TraesCS7A01G256000 chr7B 92.126 127 8 1 738 864 642210894 642210770 1.250000e-40 178.0
7 TraesCS7A01G256000 chr7B 82.418 91 14 2 1196 1285 600965073 600964984 1.310000e-10 78.7
8 TraesCS7A01G256000 chr7D 88.224 1503 108 29 2214 3710 231382133 231383572 0.000000e+00 1731.0
9 TraesCS7A01G256000 chr7D 91.757 922 42 21 855 1762 231380736 231381637 0.000000e+00 1251.0
10 TraesCS7A01G256000 chr7D 88.658 529 14 11 232 746 231380258 231380754 1.740000e-168 603.0
11 TraesCS7A01G256000 chr7D 85.832 487 34 8 3918 4377 231383569 231384047 6.580000e-133 484.0
12 TraesCS7A01G256000 chr7D 91.829 257 10 6 1929 2181 231381893 231382142 9.010000e-92 348.0
13 TraesCS7A01G256000 chr7D 96.104 77 3 0 125 201 231380185 231380261 4.600000e-25 126.0
14 TraesCS7A01G256000 chr4A 98.333 120 2 0 738 857 707660723 707660842 1.230000e-50 211.0
15 TraesCS7A01G256000 chr4A 93.388 121 8 0 738 858 142343700 142343820 3.480000e-41 180.0
16 TraesCS7A01G256000 chr3B 95.833 120 5 0 738 857 187550053 187550172 1.240000e-45 195.0
17 TraesCS7A01G256000 chr3B 81.159 207 27 7 3918 4120 447970736 447970934 5.860000e-34 156.0
18 TraesCS7A01G256000 chr5B 95.000 120 5 1 738 857 691997920 691997802 2.080000e-43 187.0
19 TraesCS7A01G256000 chr6A 95.575 113 5 0 738 850 116339236 116339348 9.670000e-42 182.0
20 TraesCS7A01G256000 chr4B 91.176 136 8 3 738 873 12626157 12626026 9.670000e-42 182.0
21 TraesCS7A01G256000 chr1A 93.333 120 8 0 738 857 471791934 471792053 1.250000e-40 178.0
22 TraesCS7A01G256000 chr1A 82.796 186 32 0 1034 1219 563685836 563685651 2.710000e-37 167.0
23 TraesCS7A01G256000 chr1A 79.902 204 37 4 1018 1219 175178823 175178622 3.530000e-31 147.0
24 TraesCS7A01G256000 chr1B 83.333 186 31 0 1034 1219 652458912 652458727 5.820000e-39 172.0
25 TraesCS7A01G256000 chr1B 88.800 125 13 1 3745 3869 675459264 675459141 7.580000e-33 152.0
26 TraesCS7A01G256000 chr1B 79.902 204 37 4 1018 1219 242248736 242248535 3.530000e-31 147.0
27 TraesCS7A01G256000 chr1D 82.796 186 32 0 1034 1219 470076671 470076486 2.710000e-37 167.0
28 TraesCS7A01G256000 chr1D 79.412 204 38 4 1018 1219 184470881 184471082 1.640000e-29 141.0
29 TraesCS7A01G256000 chrUn 86.395 147 15 2 3719 3864 464772777 464772919 5.860000e-34 156.0
30 TraesCS7A01G256000 chr2A 77.385 283 47 10 3941 4210 638588220 638587942 7.580000e-33 152.0
31 TraesCS7A01G256000 chr6D 76.412 301 53 11 3993 4279 380558149 380558445 3.530000e-31 147.0
32 TraesCS7A01G256000 chr6D 74.825 286 54 10 4007 4279 357271613 357271893 3.580000e-21 113.0
33 TraesCS7A01G256000 chr3D 79.710 207 31 5 3918 4120 348146088 348146287 5.900000e-29 139.0
34 TraesCS7A01G256000 chr5D 77.895 190 40 2 1031 1219 413698368 413698556 2.770000e-22 117.0
35 TraesCS7A01G256000 chr6B 77.249 189 27 8 4007 4184 538940541 538940724 3.600000e-16 97.1
36 TraesCS7A01G256000 chr5A 72.208 385 78 20 3923 4290 368779344 368778972 1.680000e-14 91.6
37 TraesCS7A01G256000 chr2B 75.568 176 29 7 4167 4329 200865251 200865425 1.690000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G256000 chr7A 244478661 244483037 4376 False 8083.000000 8083 100.000000 1 4377 1 chr7A.!!$F2 4376
1 TraesCS7A01G256000 chr7B 202823013 202826649 3636 False 1385.666667 2030 87.955667 1 3617 3 chr7B.!!$F1 3616
2 TraesCS7A01G256000 chr7D 231380185 231384047 3862 False 757.166667 1731 90.400667 125 4377 6 chr7D.!!$F1 4252

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
631 668 0.026544 CTCGTCTCGTAACTCTCGGC 59.973 60.0 0.00 0.00 0.00 5.54 F
783 820 0.034337 ACGTTGGGTCGCTTACATGT 59.966 50.0 2.69 2.69 0.00 3.21 F
787 824 0.177141 TGGGTCGCTTACATGTAGGC 59.823 55.0 25.62 25.62 35.16 3.93 F
789 826 0.177141 GGTCGCTTACATGTAGGCCA 59.823 55.0 28.18 17.29 35.06 5.36 F
792 829 0.178068 CGCTTACATGTAGGCCAGGT 59.822 55.0 28.18 0.00 41.73 4.00 F
806 843 0.184933 CCAGGTTTCCAACAGGTCCA 59.815 55.0 0.00 0.00 0.00 4.02 F
828 865 0.317160 TGTCAGTGGTAGAACGGCAG 59.683 55.0 0.00 0.00 0.00 4.85 F
829 866 0.389948 GTCAGTGGTAGAACGGCAGG 60.390 60.0 0.00 0.00 0.00 4.85 F
850 887 0.395311 TGCCGAACGGTAGAGGATCT 60.395 55.0 14.63 0.00 42.21 2.75 F
851 888 0.745468 GCCGAACGGTAGAGGATCTT 59.255 55.0 14.63 0.00 39.34 2.40 F
1767 1849 0.894141 TTGGATTCGGCATTTGTGGG 59.106 50.0 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2335 2597 1.002900 CACCGTGGTGCTTGTTTAGTG 60.003 52.381 6.03 0.0 39.39 2.74 R
2528 2790 2.223900 GGGATCAAGCATAAGCAAAGCC 60.224 50.000 0.00 0.0 45.49 4.35 R
2750 3021 4.136051 AGGTGGCAAAATGAAACCAAATG 58.864 39.130 0.00 0.0 33.03 2.32 R
2782 3053 5.897851 TCATTCCCAAGGGATACGATTTA 57.102 39.130 9.01 0.0 44.74 1.40 R
2897 3170 1.672881 GCACAAGGGACATGTATCAGC 59.327 52.381 0.00 0.0 38.63 4.26 R
2901 3174 2.305635 TGACTGCACAAGGGACATGTAT 59.694 45.455 0.00 0.0 38.63 2.29 R
2951 3224 5.356882 TCAAGGAAAACGCAGATGTAAAG 57.643 39.130 0.00 0.0 0.00 1.85 R
2958 3231 5.428253 AGCTAATATCAAGGAAAACGCAGA 58.572 37.500 0.00 0.0 0.00 4.26 R
2985 3258 7.414540 GCGATATGTGAAAAGGAGAATTGTTCT 60.415 37.037 0.00 0.0 44.21 3.01 R
3034 3316 7.015226 TGCATTAGATTTGAGGATACGTTTG 57.985 36.000 0.00 0.0 46.39 2.93 R
3911 4215 0.104304 GTGCTCCGGGTATACAGTGG 59.896 60.000 0.00 3.2 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.341617 GTGTAGGTTGATGTCAGTAGCTAC 58.658 45.833 16.43 16.43 37.80 3.58
56 57 3.000773 CGCAGCTGTGTTTTGAAAAGAAC 60.001 43.478 19.30 0.00 0.00 3.01
57 58 3.925913 GCAGCTGTGTTTTGAAAAGAACA 59.074 39.130 16.64 6.11 33.67 3.18
61 62 5.405269 AGCTGTGTTTTGAAAAGAACAACAC 59.595 36.000 6.54 6.54 37.49 3.32
62 63 5.176590 GCTGTGTTTTGAAAAGAACAACACA 59.823 36.000 13.80 13.80 37.49 3.72
64 65 5.595065 GTGTTTTGAAAAGAACAACACACG 58.405 37.500 12.03 0.00 43.61 4.49
81 82 3.065510 CACACGTTGGGTTTTGTATCACA 59.934 43.478 0.00 0.00 0.00 3.58
94 95 2.288579 TGTATCACAGCGGACGAGTTTT 60.289 45.455 0.00 0.00 0.00 2.43
184 205 0.107897 CGGATTGACCCCATGACGAA 60.108 55.000 0.00 0.00 34.64 3.85
187 208 0.323629 ATTGACCCCATGACGAACGT 59.676 50.000 0.00 0.00 0.00 3.99
189 210 0.107081 TGACCCCATGACGAACGTTT 59.893 50.000 0.46 0.00 0.00 3.60
242 263 4.968259 TCGGAAGTCAAAAGAATCCTTGA 58.032 39.130 0.00 0.00 31.91 3.02
248 269 5.946486 AGTCAAAAGAATCCTTGAGTTCCT 58.054 37.500 0.00 0.00 32.48 3.36
250 271 6.488344 AGTCAAAAGAATCCTTGAGTTCCTTC 59.512 38.462 0.00 0.00 32.48 3.46
252 273 4.625607 AAGAATCCTTGAGTTCCTTCGT 57.374 40.909 0.00 0.00 0.00 3.85
253 274 5.740290 AAGAATCCTTGAGTTCCTTCGTA 57.260 39.130 0.00 0.00 0.00 3.43
254 275 5.331876 AGAATCCTTGAGTTCCTTCGTAG 57.668 43.478 0.00 0.00 0.00 3.51
255 276 4.773149 AGAATCCTTGAGTTCCTTCGTAGT 59.227 41.667 0.00 0.00 0.00 2.73
256 277 5.950549 AGAATCCTTGAGTTCCTTCGTAGTA 59.049 40.000 0.00 0.00 0.00 1.82
257 278 6.608002 AGAATCCTTGAGTTCCTTCGTAGTAT 59.392 38.462 0.00 0.00 0.00 2.12
328 357 1.275856 GCACCTGAATTGCATCCCAAA 59.724 47.619 0.00 0.00 39.93 3.28
519 549 4.373116 CACCCGTCCCACCGACAG 62.373 72.222 0.00 0.00 42.07 3.51
628 665 1.397692 CCCACTCGTCTCGTAACTCTC 59.602 57.143 0.00 0.00 0.00 3.20
629 666 1.060842 CCACTCGTCTCGTAACTCTCG 59.939 57.143 0.00 0.00 0.00 4.04
630 667 1.060842 CACTCGTCTCGTAACTCTCGG 59.939 57.143 0.00 0.00 0.00 4.63
631 668 0.026544 CTCGTCTCGTAACTCTCGGC 59.973 60.000 0.00 0.00 0.00 5.54
632 669 0.390866 TCGTCTCGTAACTCTCGGCT 60.391 55.000 0.00 0.00 0.00 5.52
633 670 1.134995 TCGTCTCGTAACTCTCGGCTA 60.135 52.381 0.00 0.00 0.00 3.93
634 671 1.005137 CGTCTCGTAACTCTCGGCTAC 60.005 57.143 0.00 0.00 0.00 3.58
635 672 2.278854 GTCTCGTAACTCTCGGCTACT 58.721 52.381 0.00 0.00 0.00 2.57
636 673 2.284952 GTCTCGTAACTCTCGGCTACTC 59.715 54.545 0.00 0.00 0.00 2.59
677 714 1.764054 CACCCCACCCCAGCAAAAA 60.764 57.895 0.00 0.00 0.00 1.94
689 726 1.227615 GCAAAAAGCAAGGCAGCCA 60.228 52.632 15.80 0.00 44.79 4.75
732 769 4.337060 GGTCAAAACCCACCGCGC 62.337 66.667 0.00 0.00 39.93 6.86
733 770 4.337060 GTCAAAACCCACCGCGCC 62.337 66.667 0.00 0.00 0.00 6.53
759 796 3.826754 CTCCTCTGCCGTGCGCTA 61.827 66.667 9.73 0.00 38.78 4.26
760 797 3.764810 CTCCTCTGCCGTGCGCTAG 62.765 68.421 9.73 1.71 38.78 3.42
761 798 4.880537 CCTCTGCCGTGCGCTAGG 62.881 72.222 9.73 13.39 38.78 3.02
762 799 4.135153 CTCTGCCGTGCGCTAGGT 62.135 66.667 19.77 0.00 38.78 3.08
763 800 4.435436 TCTGCCGTGCGCTAGGTG 62.435 66.667 19.77 14.01 38.78 4.00
764 801 4.435436 CTGCCGTGCGCTAGGTGA 62.435 66.667 19.77 8.78 38.78 4.02
765 802 4.735132 TGCCGTGCGCTAGGTGAC 62.735 66.667 19.77 3.61 38.78 3.67
767 804 4.415332 CCGTGCGCTAGGTGACGT 62.415 66.667 9.73 0.00 0.00 4.34
768 805 2.430244 CGTGCGCTAGGTGACGTT 60.430 61.111 9.73 0.00 0.00 3.99
769 806 2.716828 CGTGCGCTAGGTGACGTTG 61.717 63.158 9.73 0.00 0.00 4.10
770 807 2.048597 TGCGCTAGGTGACGTTGG 60.049 61.111 9.73 0.00 0.00 3.77
771 808 2.813908 GCGCTAGGTGACGTTGGG 60.814 66.667 0.00 0.08 0.00 4.12
772 809 2.654877 CGCTAGGTGACGTTGGGT 59.345 61.111 0.00 0.00 0.00 4.51
773 810 1.445582 CGCTAGGTGACGTTGGGTC 60.446 63.158 0.00 0.00 46.27 4.46
780 817 4.659480 GACGTTGGGTCGCTTACA 57.341 55.556 0.00 0.00 35.61 2.41
781 818 3.132863 GACGTTGGGTCGCTTACAT 57.867 52.632 0.00 0.00 35.61 2.29
782 819 0.719465 GACGTTGGGTCGCTTACATG 59.281 55.000 0.00 0.00 35.61 3.21
783 820 0.034337 ACGTTGGGTCGCTTACATGT 59.966 50.000 2.69 2.69 0.00 3.21
784 821 1.273048 ACGTTGGGTCGCTTACATGTA 59.727 47.619 0.08 0.08 0.00 2.29
785 822 1.924524 CGTTGGGTCGCTTACATGTAG 59.075 52.381 5.56 2.17 0.00 2.74
786 823 2.277084 GTTGGGTCGCTTACATGTAGG 58.723 52.381 10.51 10.51 0.00 3.18
787 824 0.177141 TGGGTCGCTTACATGTAGGC 59.823 55.000 25.62 25.62 35.16 3.93
788 825 0.532196 GGGTCGCTTACATGTAGGCC 60.532 60.000 28.18 17.56 35.06 5.19
789 826 0.177141 GGTCGCTTACATGTAGGCCA 59.823 55.000 28.18 17.29 35.06 5.36
790 827 1.571919 GTCGCTTACATGTAGGCCAG 58.428 55.000 28.18 18.08 35.06 4.85
791 828 0.464036 TCGCTTACATGTAGGCCAGG 59.536 55.000 28.18 17.47 35.06 4.45
792 829 0.178068 CGCTTACATGTAGGCCAGGT 59.822 55.000 28.18 0.00 41.73 4.00
793 830 1.406887 CGCTTACATGTAGGCCAGGTT 60.407 52.381 28.18 0.00 39.21 3.50
794 831 2.723273 GCTTACATGTAGGCCAGGTTT 58.277 47.619 25.22 0.00 39.21 3.27
795 832 2.683362 GCTTACATGTAGGCCAGGTTTC 59.317 50.000 25.22 0.00 39.21 2.78
796 833 3.279434 CTTACATGTAGGCCAGGTTTCC 58.721 50.000 5.01 0.00 39.21 3.13
797 834 1.072266 ACATGTAGGCCAGGTTTCCA 58.928 50.000 5.01 0.00 33.45 3.53
798 835 1.427368 ACATGTAGGCCAGGTTTCCAA 59.573 47.619 5.01 0.00 33.45 3.53
799 836 1.818674 CATGTAGGCCAGGTTTCCAAC 59.181 52.381 5.01 0.00 0.00 3.77
800 837 0.847373 TGTAGGCCAGGTTTCCAACA 59.153 50.000 5.01 0.00 0.00 3.33
801 838 1.202879 TGTAGGCCAGGTTTCCAACAG 60.203 52.381 5.01 0.00 0.00 3.16
802 839 0.404040 TAGGCCAGGTTTCCAACAGG 59.596 55.000 5.01 0.00 0.00 4.00
803 840 1.152546 GGCCAGGTTTCCAACAGGT 60.153 57.895 0.00 0.00 32.58 4.00
804 841 1.179174 GGCCAGGTTTCCAACAGGTC 61.179 60.000 0.00 0.00 32.58 3.85
805 842 1.179174 GCCAGGTTTCCAACAGGTCC 61.179 60.000 0.00 0.00 32.58 4.46
806 843 0.184933 CCAGGTTTCCAACAGGTCCA 59.815 55.000 0.00 0.00 0.00 4.02
807 844 1.318576 CAGGTTTCCAACAGGTCCAC 58.681 55.000 0.00 0.00 0.00 4.02
808 845 0.923358 AGGTTTCCAACAGGTCCACA 59.077 50.000 0.00 0.00 0.00 4.17
809 846 1.499007 AGGTTTCCAACAGGTCCACAT 59.501 47.619 0.00 0.00 0.00 3.21
810 847 1.613437 GGTTTCCAACAGGTCCACATG 59.387 52.381 0.00 0.00 0.00 3.21
811 848 2.306847 GTTTCCAACAGGTCCACATGT 58.693 47.619 0.00 0.00 43.27 3.21
812 849 2.270352 TTCCAACAGGTCCACATGTC 57.730 50.000 0.00 0.00 40.26 3.06
813 850 1.135960 TCCAACAGGTCCACATGTCA 58.864 50.000 0.00 0.00 40.26 3.58
814 851 1.072173 TCCAACAGGTCCACATGTCAG 59.928 52.381 0.00 0.00 40.26 3.51
815 852 1.202806 CCAACAGGTCCACATGTCAGT 60.203 52.381 0.00 0.00 40.26 3.41
816 853 1.875514 CAACAGGTCCACATGTCAGTG 59.124 52.381 0.00 0.00 40.26 3.66
825 862 2.337583 CACATGTCAGTGGTAGAACGG 58.662 52.381 0.00 0.00 35.88 4.44
826 863 1.337823 ACATGTCAGTGGTAGAACGGC 60.338 52.381 0.00 0.00 0.00 5.68
827 864 0.973632 ATGTCAGTGGTAGAACGGCA 59.026 50.000 0.00 0.00 0.00 5.69
828 865 0.317160 TGTCAGTGGTAGAACGGCAG 59.683 55.000 0.00 0.00 0.00 4.85
829 866 0.389948 GTCAGTGGTAGAACGGCAGG 60.390 60.000 0.00 0.00 0.00 4.85
830 867 1.741770 CAGTGGTAGAACGGCAGGC 60.742 63.158 0.00 0.00 0.00 4.85
831 868 1.913762 AGTGGTAGAACGGCAGGCT 60.914 57.895 0.00 0.00 0.00 4.58
832 869 1.741770 GTGGTAGAACGGCAGGCTG 60.742 63.158 10.94 10.94 0.00 4.85
833 870 2.820037 GGTAGAACGGCAGGCTGC 60.820 66.667 30.93 30.93 44.08 5.25
842 879 4.752879 GCAGGCTGCCGAACGGTA 62.753 66.667 28.87 9.39 37.42 4.02
848 885 4.349682 TGCCGAACGGTAGAGGAT 57.650 55.556 14.63 0.00 37.65 3.24
849 886 2.112898 TGCCGAACGGTAGAGGATC 58.887 57.895 14.63 0.00 37.65 3.36
850 887 0.395311 TGCCGAACGGTAGAGGATCT 60.395 55.000 14.63 0.00 42.21 2.75
851 888 0.745468 GCCGAACGGTAGAGGATCTT 59.255 55.000 14.63 0.00 39.34 2.40
852 889 1.952296 GCCGAACGGTAGAGGATCTTA 59.048 52.381 14.63 0.00 39.34 2.10
853 890 2.030981 GCCGAACGGTAGAGGATCTTAG 60.031 54.545 14.63 0.00 39.34 2.18
854 891 5.692366 GCCGAACGGTAGAGGATCTTAGC 62.692 56.522 14.63 0.00 39.34 3.09
899 936 1.076533 ACGCCACTACAAATCTCGCG 61.077 55.000 0.00 0.00 43.45 5.87
988 1031 2.265182 CCTCCGAGCTCGAGGGATC 61.265 68.421 36.59 0.00 43.02 3.36
1376 1429 2.391389 CCGCGTGCTTCCTTCCTTC 61.391 63.158 4.92 0.00 0.00 3.46
1377 1430 1.374758 CGCGTGCTTCCTTCCTTCT 60.375 57.895 0.00 0.00 0.00 2.85
1380 1433 1.197949 GCGTGCTTCCTTCCTTCTTTC 59.802 52.381 0.00 0.00 0.00 2.62
1381 1434 1.807142 CGTGCTTCCTTCCTTCTTTCC 59.193 52.381 0.00 0.00 0.00 3.13
1383 1436 3.491342 GTGCTTCCTTCCTTCTTTCCTT 58.509 45.455 0.00 0.00 0.00 3.36
1384 1437 3.254411 GTGCTTCCTTCCTTCTTTCCTTG 59.746 47.826 0.00 0.00 0.00 3.61
1385 1438 2.230025 GCTTCCTTCCTTCTTTCCTTGC 59.770 50.000 0.00 0.00 0.00 4.01
1389 1442 5.319043 TCCTTCCTTCTTTCCTTGCTTAA 57.681 39.130 0.00 0.00 0.00 1.85
1391 1444 6.314917 TCCTTCCTTCTTTCCTTGCTTAATT 58.685 36.000 0.00 0.00 0.00 1.40
1392 1445 7.466804 TCCTTCCTTCTTTCCTTGCTTAATTA 58.533 34.615 0.00 0.00 0.00 1.40
1393 1446 7.947890 TCCTTCCTTCTTTCCTTGCTTAATTAA 59.052 33.333 0.00 0.00 0.00 1.40
1394 1447 8.753133 CCTTCCTTCTTTCCTTGCTTAATTAAT 58.247 33.333 0.00 0.00 0.00 1.40
1428 1481 1.337447 TGCTTACGGCTTGTACTGTCC 60.337 52.381 0.00 0.00 42.39 4.02
1432 1485 2.380410 CGGCTTGTACTGTCCGTGC 61.380 63.158 10.61 0.00 37.33 5.34
1457 1510 7.205297 CGCTTGGATCAATTGATTCCTTATTT 58.795 34.615 21.66 0.00 34.37 1.40
1583 1636 4.581824 CCTAGATGGTGATTGATTGGGTTG 59.418 45.833 0.00 0.00 0.00 3.77
1593 1646 3.140325 TGATTGGGTTGAGTGTTCTCC 57.860 47.619 0.00 0.00 39.75 3.71
1604 1660 4.207955 TGAGTGTTCTCCGATACATAGCT 58.792 43.478 0.00 0.00 39.75 3.32
1616 1672 5.864474 CCGATACATAGCTGTAGAATTGTCC 59.136 44.000 0.00 0.00 41.05 4.02
1702 1758 2.424956 GGAATGTTTGAGGAGTGGATGC 59.575 50.000 0.00 0.00 0.00 3.91
1762 1818 3.066380 GCTTGTTTTGGATTCGGCATTT 58.934 40.909 0.00 0.00 0.00 2.32
1763 1819 3.120580 GCTTGTTTTGGATTCGGCATTTG 60.121 43.478 0.00 0.00 0.00 2.32
1767 1849 0.894141 TTGGATTCGGCATTTGTGGG 59.106 50.000 0.00 0.00 0.00 4.61
1786 1868 9.444600 TTTGTGGGAACAAGTATAGAAGTTATC 57.555 33.333 0.00 0.00 46.06 1.75
1790 1872 7.070821 TGGGAACAAGTATAGAAGTTATCCTCC 59.929 40.741 0.00 0.00 37.44 4.30
1792 1874 7.014038 GGAACAAGTATAGAAGTTATCCTCCGA 59.986 40.741 0.00 0.00 0.00 4.55
1793 1875 7.274603 ACAAGTATAGAAGTTATCCTCCGAC 57.725 40.000 0.00 0.00 0.00 4.79
1794 1876 6.832384 ACAAGTATAGAAGTTATCCTCCGACA 59.168 38.462 0.00 0.00 0.00 4.35
1855 1939 4.642437 TGTGGTGAACTATTTGCAGTTTCA 59.358 37.500 0.00 0.00 38.86 2.69
1868 1952 7.467557 TTTGCAGTTTCAAATTTCTGACATC 57.532 32.000 8.40 0.00 31.64 3.06
2021 2268 5.341169 TCCATTTCCCTTCTTAGGCAATTT 58.659 37.500 0.00 0.00 40.50 1.82
2090 2337 5.759763 GCATTGTCTTGGTTCATTCCTTTTT 59.240 36.000 0.00 0.00 0.00 1.94
2177 2434 6.764308 AAGCTATGCTCATAACACAATTGT 57.236 33.333 4.92 4.92 38.25 2.71
2199 2456 5.414454 TGTGTTAGGCTGAACAAATGTATCC 59.586 40.000 0.00 0.00 40.88 2.59
2224 2481 6.060028 TGACTCTAGTTGCAATTTGTGTTC 57.940 37.500 0.59 2.59 0.00 3.18
2252 2509 3.008157 TCAATTGGCATGCCATGAAACTT 59.992 39.130 38.78 21.10 46.64 2.66
2274 2531 1.672881 GGAGAAAGGACAATGCATCCG 59.327 52.381 0.00 0.00 41.52 4.18
2278 2535 4.780815 AGAAAGGACAATGCATCCGAATA 58.219 39.130 0.00 0.00 41.52 1.75
2291 2548 4.160626 GCATCCGAATAATCCTAGCTACCT 59.839 45.833 0.00 0.00 0.00 3.08
2292 2549 5.360144 GCATCCGAATAATCCTAGCTACCTA 59.640 44.000 0.00 0.00 0.00 3.08
2293 2550 6.460399 GCATCCGAATAATCCTAGCTACCTAG 60.460 46.154 0.00 0.00 40.64 3.02
2294 2551 6.137104 TCCGAATAATCCTAGCTACCTAGT 57.863 41.667 0.00 0.00 39.56 2.57
2295 2552 7.262990 TCCGAATAATCCTAGCTACCTAGTA 57.737 40.000 0.00 0.00 39.56 1.82
2296 2553 7.108847 TCCGAATAATCCTAGCTACCTAGTAC 58.891 42.308 0.00 0.00 39.56 2.73
2297 2554 6.036953 CCGAATAATCCTAGCTACCTAGTACG 59.963 46.154 0.00 0.00 39.56 3.67
2298 2555 6.036953 CGAATAATCCTAGCTACCTAGTACGG 59.963 46.154 0.00 0.00 39.56 4.02
2299 2556 4.989875 AATCCTAGCTACCTAGTACGGA 57.010 45.455 0.00 0.00 39.56 4.69
2300 2557 4.556592 ATCCTAGCTACCTAGTACGGAG 57.443 50.000 0.00 0.00 39.56 4.63
2301 2558 3.312890 TCCTAGCTACCTAGTACGGAGT 58.687 50.000 0.00 0.00 40.66 3.85
2302 2559 4.483950 TCCTAGCTACCTAGTACGGAGTA 58.516 47.826 0.00 0.00 38.42 2.59
2335 2597 3.799420 TGGCATACAAAGTTTTGAAACGC 59.201 39.130 11.29 7.70 43.51 4.84
2365 2627 1.068816 GCACCACGGTGTTATTGGAAC 60.069 52.381 17.26 0.00 46.90 3.62
2366 2628 2.500229 CACCACGGTGTTATTGGAACT 58.500 47.619 8.11 0.00 40.91 3.01
2367 2629 2.882137 CACCACGGTGTTATTGGAACTT 59.118 45.455 8.11 0.00 40.91 2.66
2368 2630 2.882137 ACCACGGTGTTATTGGAACTTG 59.118 45.455 7.45 0.00 34.24 3.16
2369 2631 2.227865 CCACGGTGTTATTGGAACTTGG 59.772 50.000 7.45 0.00 31.39 3.61
2370 2632 3.142951 CACGGTGTTATTGGAACTTGGA 58.857 45.455 0.00 0.00 0.00 3.53
2371 2633 3.566322 CACGGTGTTATTGGAACTTGGAA 59.434 43.478 0.00 0.00 0.00 3.53
2421 2683 8.436046 ACAATTTTACATTTTGTCACTTGCAT 57.564 26.923 0.00 0.00 0.00 3.96
2457 2719 8.299570 TGTGCCATATTTTTGTTTTTGTTTTGT 58.700 25.926 0.00 0.00 0.00 2.83
2478 2740 5.065914 TGTAGCAGTTTCTCAGAATGCTTT 58.934 37.500 18.48 1.27 44.47 3.51
2484 2746 5.855395 CAGTTTCTCAGAATGCTTTTACTGC 59.145 40.000 1.19 0.00 34.76 4.40
2586 2849 2.906691 TTTGTGGCTTTTGGATGGTG 57.093 45.000 0.00 0.00 0.00 4.17
2628 2898 4.771054 AGGTGTGGATATATCGGAAGGTAC 59.229 45.833 6.64 0.00 0.00 3.34
2630 2900 4.081807 GTGTGGATATATCGGAAGGTACCC 60.082 50.000 8.74 0.00 0.00 3.69
2631 2901 3.450096 GTGGATATATCGGAAGGTACCCC 59.550 52.174 8.74 2.24 0.00 4.95
2645 2915 5.505189 AGGTACCCCTATATGATAGGCAT 57.495 43.478 8.74 0.80 40.19 4.40
2770 3041 5.469421 TGATCATTTGGTTTCATTTTGCCAC 59.531 36.000 0.00 0.00 0.00 5.01
2782 3053 5.619220 TCATTTTGCCACCTTAAAAGCAAT 58.381 33.333 0.00 0.00 44.10 3.56
2824 3096 6.748333 ATGATCTGTCATGTGTTACCTTTG 57.252 37.500 0.00 0.00 43.35 2.77
2826 3098 3.750371 TCTGTCATGTGTTACCTTTGGG 58.250 45.455 0.00 0.00 38.88 4.12
2897 3170 3.189618 TGATGGCTATCACTGCTTGAG 57.810 47.619 8.93 0.00 38.37 3.02
2898 3171 1.872313 GATGGCTATCACTGCTTGAGC 59.128 52.381 5.00 0.00 37.77 4.26
2901 3174 1.134580 GGCTATCACTGCTTGAGCTGA 60.135 52.381 15.46 7.07 41.71 4.26
2951 3224 3.057946 GTCATTCCTTGCACTTCTGGTTC 60.058 47.826 0.00 0.00 0.00 3.62
2958 3231 4.520492 CCTTGCACTTCTGGTTCTTTACAT 59.480 41.667 0.00 0.00 0.00 2.29
2983 3256 7.217200 TCTGCGTTTTCCTTGATATTAGCTAT 58.783 34.615 0.00 0.00 0.00 2.97
2984 3257 7.715249 TCTGCGTTTTCCTTGATATTAGCTATT 59.285 33.333 0.00 0.00 0.00 1.73
2985 3258 8.896320 TGCGTTTTCCTTGATATTAGCTATTA 57.104 30.769 0.00 0.00 0.00 0.98
3034 3316 3.686016 TGCATTTCCTCTGAAGTAACCC 58.314 45.455 0.00 0.00 0.00 4.11
3163 3445 3.406682 CAAAGCACTTGCCGAATCC 57.593 52.632 0.00 0.00 43.38 3.01
3407 3689 4.710865 TGGTACATTGTCGACTATTGGGTA 59.289 41.667 17.92 10.29 0.00 3.69
3410 3692 7.069702 TGGTACATTGTCGACTATTGGGTATTA 59.930 37.037 17.92 4.63 0.00 0.98
3549 3851 3.099267 AGAGTGGAGACGAACTGTTTG 57.901 47.619 6.23 6.23 0.00 2.93
3620 3923 1.377690 TTTTATGGGAGGTCAGGGCA 58.622 50.000 0.00 0.00 0.00 5.36
3626 3929 2.224159 GGAGGTCAGGGCAACTCCA 61.224 63.158 2.67 0.00 46.81 3.86
3644 3947 2.709883 AATCCGGTGCGCCAAATGG 61.710 57.895 18.18 9.46 38.53 3.16
3657 3960 1.203994 CCAAATGGCTGCCTCTCTTTG 59.796 52.381 21.03 20.31 0.00 2.77
3672 3976 4.206697 TTGGCCATCCAACCCAAC 57.793 55.556 6.09 0.00 46.89 3.77
3675 3979 4.114997 GCCATCCAACCCAACGCG 62.115 66.667 3.53 3.53 0.00 6.01
3699 4003 3.007182 CACTGAATGATTGCCCCTGTTTT 59.993 43.478 0.00 0.00 0.00 2.43
3718 4022 2.702592 TTTTCCCTATACCTGCGGTG 57.297 50.000 10.01 0.00 36.19 4.94
3719 4023 0.834612 TTTCCCTATACCTGCGGTGG 59.165 55.000 10.01 3.64 36.19 4.61
3720 4024 1.692173 TTCCCTATACCTGCGGTGGC 61.692 60.000 10.01 0.00 36.19 5.01
3721 4025 2.029073 CCTATACCTGCGGTGGCG 59.971 66.667 10.01 0.00 44.10 5.69
3722 4026 2.029073 CTATACCTGCGGTGGCGG 59.971 66.667 10.01 0.00 45.49 6.13
3746 4050 9.275231 CGGAGCTAGAAAATATGTACGTATTAG 57.725 37.037 18.46 13.54 0.00 1.73
3747 4051 9.570488 GGAGCTAGAAAATATGTACGTATTAGG 57.430 37.037 18.46 9.60 0.00 2.69
3748 4052 9.570488 GAGCTAGAAAATATGTACGTATTAGGG 57.430 37.037 18.46 9.87 0.00 3.53
3749 4053 9.305555 AGCTAGAAAATATGTACGTATTAGGGA 57.694 33.333 18.46 6.53 0.00 4.20
3750 4054 9.570488 GCTAGAAAATATGTACGTATTAGGGAG 57.430 37.037 18.46 14.44 0.00 4.30
3752 4056 8.716674 AGAAAATATGTACGTATTAGGGAGGA 57.283 34.615 18.46 0.00 0.00 3.71
3753 4057 8.583296 AGAAAATATGTACGTATTAGGGAGGAC 58.417 37.037 18.46 6.58 0.00 3.85
3754 4058 7.844493 AAATATGTACGTATTAGGGAGGACA 57.156 36.000 18.46 0.00 0.00 4.02
3755 4059 7.844493 AATATGTACGTATTAGGGAGGACAA 57.156 36.000 17.01 0.00 0.00 3.18
3756 4060 5.786264 ATGTACGTATTAGGGAGGACAAG 57.214 43.478 0.00 0.00 0.00 3.16
3757 4061 4.603131 TGTACGTATTAGGGAGGACAAGT 58.397 43.478 0.00 0.00 0.00 3.16
3758 4062 4.400251 TGTACGTATTAGGGAGGACAAGTG 59.600 45.833 0.00 0.00 0.00 3.16
3759 4063 3.438183 ACGTATTAGGGAGGACAAGTGT 58.562 45.455 0.00 0.00 0.00 3.55
3760 4064 3.836562 ACGTATTAGGGAGGACAAGTGTT 59.163 43.478 0.00 0.00 0.00 3.32
3761 4065 4.181578 CGTATTAGGGAGGACAAGTGTTG 58.818 47.826 0.00 0.00 0.00 3.33
3762 4066 2.561478 TTAGGGAGGACAAGTGTTGC 57.439 50.000 0.00 0.00 0.00 4.17
3763 4067 1.729586 TAGGGAGGACAAGTGTTGCT 58.270 50.000 0.00 0.00 0.00 3.91
3764 4068 1.729586 AGGGAGGACAAGTGTTGCTA 58.270 50.000 0.00 0.00 0.00 3.49
3765 4069 2.054799 AGGGAGGACAAGTGTTGCTAA 58.945 47.619 0.00 0.00 0.00 3.09
3766 4070 2.441750 AGGGAGGACAAGTGTTGCTAAA 59.558 45.455 0.00 0.00 0.00 1.85
3767 4071 3.117663 AGGGAGGACAAGTGTTGCTAAAA 60.118 43.478 0.00 0.00 0.00 1.52
3768 4072 3.004419 GGGAGGACAAGTGTTGCTAAAAC 59.996 47.826 0.00 0.00 0.00 2.43
3769 4073 3.630312 GGAGGACAAGTGTTGCTAAAACA 59.370 43.478 0.00 0.00 0.00 2.83
3770 4074 4.261197 GGAGGACAAGTGTTGCTAAAACAG 60.261 45.833 0.00 0.00 0.00 3.16
3771 4075 3.632145 AGGACAAGTGTTGCTAAAACAGG 59.368 43.478 0.00 0.00 0.00 4.00
3772 4076 3.380320 GGACAAGTGTTGCTAAAACAGGT 59.620 43.478 0.00 0.00 0.00 4.00
3773 4077 4.142249 GGACAAGTGTTGCTAAAACAGGTT 60.142 41.667 0.00 0.00 0.00 3.50
3774 4078 5.066764 GGACAAGTGTTGCTAAAACAGGTTA 59.933 40.000 0.00 0.00 0.00 2.85
3775 4079 6.131544 ACAAGTGTTGCTAAAACAGGTTAG 57.868 37.500 0.00 0.00 34.71 2.34
3776 4080 5.067283 ACAAGTGTTGCTAAAACAGGTTAGG 59.933 40.000 0.00 0.00 32.62 2.69
3777 4081 4.142038 AGTGTTGCTAAAACAGGTTAGGG 58.858 43.478 0.00 0.00 32.62 3.53
3778 4082 4.139038 GTGTTGCTAAAACAGGTTAGGGA 58.861 43.478 0.00 0.00 32.62 4.20
3779 4083 4.215613 GTGTTGCTAAAACAGGTTAGGGAG 59.784 45.833 0.00 0.00 32.62 4.30
3780 4084 3.713826 TGCTAAAACAGGTTAGGGAGG 57.286 47.619 0.00 0.00 32.62 4.30
3781 4085 2.307686 TGCTAAAACAGGTTAGGGAGGG 59.692 50.000 0.00 0.00 32.62 4.30
3782 4086 2.356844 GCTAAAACAGGTTAGGGAGGGG 60.357 54.545 0.00 0.00 32.62 4.79
3783 4087 0.408309 AAAACAGGTTAGGGAGGGGC 59.592 55.000 0.00 0.00 0.00 5.80
3784 4088 0.774491 AAACAGGTTAGGGAGGGGCA 60.774 55.000 0.00 0.00 0.00 5.36
3785 4089 0.774491 AACAGGTTAGGGAGGGGCAA 60.774 55.000 0.00 0.00 0.00 4.52
3786 4090 0.774491 ACAGGTTAGGGAGGGGCAAA 60.774 55.000 0.00 0.00 0.00 3.68
3787 4091 0.323451 CAGGTTAGGGAGGGGCAAAC 60.323 60.000 0.00 0.00 0.00 2.93
3788 4092 0.477795 AGGTTAGGGAGGGGCAAACT 60.478 55.000 0.00 0.00 0.00 2.66
3789 4093 1.203518 AGGTTAGGGAGGGGCAAACTA 60.204 52.381 0.00 0.00 0.00 2.24
3790 4094 1.850998 GGTTAGGGAGGGGCAAACTAT 59.149 52.381 0.00 0.00 0.00 2.12
3791 4095 2.243994 GGTTAGGGAGGGGCAAACTATT 59.756 50.000 0.00 0.00 0.00 1.73
3792 4096 3.288092 GTTAGGGAGGGGCAAACTATTG 58.712 50.000 0.00 0.00 39.65 1.90
3793 4097 1.681229 AGGGAGGGGCAAACTATTGA 58.319 50.000 0.00 0.00 38.94 2.57
3794 4098 2.000048 AGGGAGGGGCAAACTATTGAA 59.000 47.619 0.00 0.00 38.94 2.69
3795 4099 2.381961 AGGGAGGGGCAAACTATTGAAA 59.618 45.455 0.00 0.00 38.94 2.69
3796 4100 3.169908 GGGAGGGGCAAACTATTGAAAA 58.830 45.455 0.00 0.00 38.94 2.29
3797 4101 3.774766 GGGAGGGGCAAACTATTGAAAAT 59.225 43.478 0.00 0.00 38.94 1.82
3798 4102 4.225042 GGGAGGGGCAAACTATTGAAAATT 59.775 41.667 0.00 0.00 38.94 1.82
3799 4103 5.280470 GGGAGGGGCAAACTATTGAAAATTT 60.280 40.000 0.00 0.00 38.94 1.82
3800 4104 5.643348 GGAGGGGCAAACTATTGAAAATTTG 59.357 40.000 0.00 0.00 38.94 2.32
3801 4105 6.432403 AGGGGCAAACTATTGAAAATTTGA 57.568 33.333 0.00 0.00 38.94 2.69
3802 4106 7.019656 AGGGGCAAACTATTGAAAATTTGAT 57.980 32.000 0.00 0.00 38.94 2.57
3803 4107 7.460910 AGGGGCAAACTATTGAAAATTTGATT 58.539 30.769 0.00 0.00 38.94 2.57
3804 4108 7.944000 AGGGGCAAACTATTGAAAATTTGATTT 59.056 29.630 0.00 0.00 38.94 2.17
3805 4109 8.575589 GGGGCAAACTATTGAAAATTTGATTTT 58.424 29.630 0.00 0.00 44.56 1.82
3806 4110 9.964303 GGGCAAACTATTGAAAATTTGATTTTT 57.036 25.926 0.00 0.00 42.15 1.94
3833 4137 8.859090 AGCAGCAAATTATTAGTAATTATGGCA 58.141 29.630 16.76 0.00 39.09 4.92
3834 4138 8.915654 GCAGCAAATTATTAGTAATTATGGCAC 58.084 33.333 16.76 9.59 39.09 5.01
3844 4148 8.833231 TTAGTAATTATGGCACTCTTCATAGC 57.167 34.615 0.00 0.00 0.00 2.97
3845 4149 6.830912 AGTAATTATGGCACTCTTCATAGCA 58.169 36.000 0.00 0.00 0.00 3.49
3846 4150 7.282585 AGTAATTATGGCACTCTTCATAGCAA 58.717 34.615 0.00 0.00 0.00 3.91
3847 4151 7.775093 AGTAATTATGGCACTCTTCATAGCAAA 59.225 33.333 0.00 0.00 0.00 3.68
3848 4152 7.592885 AATTATGGCACTCTTCATAGCAAAT 57.407 32.000 0.00 0.00 0.00 2.32
3849 4153 6.624352 TTATGGCACTCTTCATAGCAAATC 57.376 37.500 0.00 0.00 0.00 2.17
3850 4154 3.954200 TGGCACTCTTCATAGCAAATCA 58.046 40.909 0.00 0.00 0.00 2.57
3851 4155 4.334552 TGGCACTCTTCATAGCAAATCAA 58.665 39.130 0.00 0.00 0.00 2.57
3852 4156 4.156556 TGGCACTCTTCATAGCAAATCAAC 59.843 41.667 0.00 0.00 0.00 3.18
3853 4157 4.156556 GGCACTCTTCATAGCAAATCAACA 59.843 41.667 0.00 0.00 0.00 3.33
3854 4158 5.091431 GCACTCTTCATAGCAAATCAACAC 58.909 41.667 0.00 0.00 0.00 3.32
3855 4159 5.106396 GCACTCTTCATAGCAAATCAACACT 60.106 40.000 0.00 0.00 0.00 3.55
3856 4160 6.092670 GCACTCTTCATAGCAAATCAACACTA 59.907 38.462 0.00 0.00 0.00 2.74
3857 4161 7.361201 GCACTCTTCATAGCAAATCAACACTAA 60.361 37.037 0.00 0.00 0.00 2.24
3858 4162 8.506437 CACTCTTCATAGCAAATCAACACTAAA 58.494 33.333 0.00 0.00 0.00 1.85
3859 4163 9.236006 ACTCTTCATAGCAAATCAACACTAAAT 57.764 29.630 0.00 0.00 0.00 1.40
3862 4166 9.294030 CTTCATAGCAAATCAACACTAAATTCC 57.706 33.333 0.00 0.00 0.00 3.01
3863 4167 8.579850 TCATAGCAAATCAACACTAAATTCCT 57.420 30.769 0.00 0.00 0.00 3.36
3864 4168 9.023962 TCATAGCAAATCAACACTAAATTCCTT 57.976 29.630 0.00 0.00 0.00 3.36
3868 4172 8.806146 AGCAAATCAACACTAAATTCCTTATGT 58.194 29.630 0.00 0.00 0.00 2.29
3869 4173 9.076596 GCAAATCAACACTAAATTCCTTATGTC 57.923 33.333 0.00 0.00 0.00 3.06
3872 4176 9.965902 AATCAACACTAAATTCCTTATGTCTCT 57.034 29.630 0.00 0.00 0.00 3.10
3873 4177 9.606631 ATCAACACTAAATTCCTTATGTCTCTC 57.393 33.333 0.00 0.00 0.00 3.20
3874 4178 8.816894 TCAACACTAAATTCCTTATGTCTCTCT 58.183 33.333 0.00 0.00 0.00 3.10
3875 4179 9.442047 CAACACTAAATTCCTTATGTCTCTCTT 57.558 33.333 0.00 0.00 0.00 2.85
3876 4180 9.660180 AACACTAAATTCCTTATGTCTCTCTTC 57.340 33.333 0.00 0.00 0.00 2.87
3877 4181 8.816894 ACACTAAATTCCTTATGTCTCTCTTCA 58.183 33.333 0.00 0.00 0.00 3.02
3878 4182 9.829507 CACTAAATTCCTTATGTCTCTCTTCAT 57.170 33.333 0.00 0.00 0.00 2.57
3881 4185 8.900983 AAATTCCTTATGTCTCTCTTCATAGC 57.099 34.615 0.00 0.00 0.00 2.97
3882 4186 7.609097 ATTCCTTATGTCTCTCTTCATAGCA 57.391 36.000 0.00 0.00 0.00 3.49
3883 4187 7.423844 TTCCTTATGTCTCTCTTCATAGCAA 57.576 36.000 0.00 0.00 0.00 3.91
3884 4188 7.609097 TCCTTATGTCTCTCTTCATAGCAAT 57.391 36.000 0.00 0.00 0.00 3.56
3885 4189 8.027524 TCCTTATGTCTCTCTTCATAGCAATT 57.972 34.615 0.00 0.00 0.00 2.32
3886 4190 8.147058 TCCTTATGTCTCTCTTCATAGCAATTC 58.853 37.037 0.00 0.00 0.00 2.17
3887 4191 7.930325 CCTTATGTCTCTCTTCATAGCAATTCA 59.070 37.037 0.00 0.00 0.00 2.57
3888 4192 9.322773 CTTATGTCTCTCTTCATAGCAATTCAA 57.677 33.333 0.00 0.00 0.00 2.69
3889 4193 6.974932 TGTCTCTCTTCATAGCAATTCAAC 57.025 37.500 0.00 0.00 0.00 3.18
3890 4194 6.466812 TGTCTCTCTTCATAGCAATTCAACA 58.533 36.000 0.00 0.00 0.00 3.33
3891 4195 6.369890 TGTCTCTCTTCATAGCAATTCAACAC 59.630 38.462 0.00 0.00 0.00 3.32
3892 4196 6.593382 GTCTCTCTTCATAGCAATTCAACACT 59.407 38.462 0.00 0.00 0.00 3.55
3893 4197 7.761704 GTCTCTCTTCATAGCAATTCAACACTA 59.238 37.037 0.00 0.00 0.00 2.74
3894 4198 8.314021 TCTCTCTTCATAGCAATTCAACACTAA 58.686 33.333 0.00 0.00 0.00 2.24
3895 4199 8.846943 TCTCTTCATAGCAATTCAACACTAAA 57.153 30.769 0.00 0.00 0.00 1.85
3896 4200 9.453572 TCTCTTCATAGCAATTCAACACTAAAT 57.546 29.630 0.00 0.00 0.00 1.40
3899 4203 9.294030 CTTCATAGCAATTCAACACTAAATTCC 57.706 33.333 0.00 0.00 0.00 3.01
3900 4204 8.579850 TCATAGCAATTCAACACTAAATTCCT 57.420 30.769 0.00 0.00 0.00 3.36
3901 4205 9.023962 TCATAGCAATTCAACACTAAATTCCTT 57.976 29.630 0.00 0.00 0.00 3.36
3905 4209 8.806146 AGCAATTCAACACTAAATTCCTTATGT 58.194 29.630 0.00 0.00 0.00 2.29
3906 4210 9.076596 GCAATTCAACACTAAATTCCTTATGTC 57.923 33.333 0.00 0.00 0.00 3.06
3909 4213 8.561738 TTCAACACTAAATTCCTTATGTCTCC 57.438 34.615 0.00 0.00 0.00 3.71
3910 4214 6.816640 TCAACACTAAATTCCTTATGTCTCCG 59.183 38.462 0.00 0.00 0.00 4.63
3911 4215 5.116882 ACACTAAATTCCTTATGTCTCCGC 58.883 41.667 0.00 0.00 0.00 5.54
3912 4216 4.511826 CACTAAATTCCTTATGTCTCCGCC 59.488 45.833 0.00 0.00 0.00 6.13
3913 4217 3.644966 AAATTCCTTATGTCTCCGCCA 57.355 42.857 0.00 0.00 0.00 5.69
3914 4218 2.622064 ATTCCTTATGTCTCCGCCAC 57.378 50.000 0.00 0.00 0.00 5.01
3915 4219 1.568504 TTCCTTATGTCTCCGCCACT 58.431 50.000 0.00 0.00 0.00 4.00
3916 4220 0.824109 TCCTTATGTCTCCGCCACTG 59.176 55.000 0.00 0.00 0.00 3.66
3921 4225 4.547532 CTTATGTCTCCGCCACTGTATAC 58.452 47.826 0.00 0.00 0.00 1.47
3933 4237 1.063867 ACTGTATACCCGGAGCACTCT 60.064 52.381 0.73 0.00 0.00 3.24
3940 4244 3.753294 ACCCGGAGCACTCTAAATATG 57.247 47.619 0.73 0.00 0.00 1.78
4117 4421 3.494749 CCATTGAAGGGTGCACAAATGTT 60.495 43.478 20.43 3.62 0.00 2.71
4123 4437 4.032960 AGGGTGCACAAATGTTCATCTA 57.967 40.909 20.43 0.00 0.00 1.98
4143 4457 8.535335 TCATCTAAAGCTACTCATGAGTTTCTT 58.465 33.333 32.14 27.62 42.54 2.52
4144 4458 8.602328 CATCTAAAGCTACTCATGAGTTTCTTG 58.398 37.037 32.14 20.89 42.54 3.02
4154 4468 4.333649 TCATGAGTTTCTTGATGGCGAATC 59.666 41.667 0.00 0.00 35.67 2.52
4159 4473 4.520492 AGTTTCTTGATGGCGAATCTGTTT 59.480 37.500 0.00 0.00 36.15 2.83
4163 4477 5.185454 TCTTGATGGCGAATCTGTTTATGT 58.815 37.500 0.00 0.00 36.15 2.29
4200 4514 3.411446 TCAAATGTCGTTGGATTCTGCT 58.589 40.909 0.00 0.00 0.00 4.24
4201 4515 4.574892 TCAAATGTCGTTGGATTCTGCTA 58.425 39.130 0.00 0.00 0.00 3.49
4203 4517 5.065090 TCAAATGTCGTTGGATTCTGCTATG 59.935 40.000 0.00 0.00 0.00 2.23
4204 4518 3.885724 TGTCGTTGGATTCTGCTATGA 57.114 42.857 0.00 0.00 0.00 2.15
4206 4520 4.574892 TGTCGTTGGATTCTGCTATGAAA 58.425 39.130 0.00 0.00 0.00 2.69
4207 4521 4.631377 TGTCGTTGGATTCTGCTATGAAAG 59.369 41.667 0.00 0.00 0.00 2.62
4208 4522 4.631813 GTCGTTGGATTCTGCTATGAAAGT 59.368 41.667 0.00 0.00 0.00 2.66
4209 4523 5.122396 GTCGTTGGATTCTGCTATGAAAGTT 59.878 40.000 0.00 0.00 0.00 2.66
4210 4524 5.705441 TCGTTGGATTCTGCTATGAAAGTTT 59.295 36.000 0.00 0.00 0.00 2.66
4211 4525 5.796935 CGTTGGATTCTGCTATGAAAGTTTG 59.203 40.000 0.00 0.00 0.00 2.93
4212 4526 5.314923 TGGATTCTGCTATGAAAGTTTGC 57.685 39.130 0.00 0.00 0.00 3.68
4213 4527 4.158394 TGGATTCTGCTATGAAAGTTTGCC 59.842 41.667 0.00 0.00 0.00 4.52
4214 4528 4.158394 GGATTCTGCTATGAAAGTTTGCCA 59.842 41.667 0.00 0.00 0.00 4.92
4215 4529 5.163478 GGATTCTGCTATGAAAGTTTGCCAT 60.163 40.000 0.00 0.00 0.00 4.40
4216 4530 4.707030 TCTGCTATGAAAGTTTGCCATG 57.293 40.909 0.00 0.00 0.00 3.66
4217 4531 4.334552 TCTGCTATGAAAGTTTGCCATGA 58.665 39.130 0.00 0.00 0.00 3.07
4235 4549 5.278364 GCCATGATCATTCATCTCCTCAAAC 60.278 44.000 5.16 0.00 40.70 2.93
4238 4552 6.556974 TGATCATTCATCTCCTCAAACTCT 57.443 37.500 0.00 0.00 31.92 3.24
4239 4553 6.580788 TGATCATTCATCTCCTCAAACTCTC 58.419 40.000 0.00 0.00 31.92 3.20
4265 4579 2.927580 GCGAACTCGGTCACCCTCA 61.928 63.158 0.69 0.00 40.23 3.86
4289 4603 4.869861 TCCTACACAATCACGTTCATGATG 59.130 41.667 0.00 0.00 39.32 3.07
4290 4604 4.631377 CCTACACAATCACGTTCATGATGT 59.369 41.667 0.00 0.00 39.32 3.06
4314 4635 2.002586 CATCACGTCCCACAATGTCTC 58.997 52.381 0.00 0.00 0.00 3.36
4332 4662 2.091111 TCTCTGCATCCCATAGTCCTCA 60.091 50.000 0.00 0.00 0.00 3.86
4361 4691 2.227865 GCAAAACGGAATTGGAGCACTA 59.772 45.455 0.00 0.00 0.00 2.74
4363 4693 2.109425 AACGGAATTGGAGCACTACC 57.891 50.000 0.00 0.00 0.00 3.18
4365 4695 1.559682 ACGGAATTGGAGCACTACCAT 59.440 47.619 0.00 0.00 37.26 3.55
4368 4698 2.099756 GGAATTGGAGCACTACCATTGC 59.900 50.000 0.00 0.00 40.52 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.195825 AGCTACTGACATCAACCTACACC 59.804 47.826 0.00 0.00 0.00 4.16
19 20 3.389206 GCGCACTGCAGTAGCTAC 58.611 61.111 28.62 16.43 45.45 3.58
34 35 2.796304 TCTTTTCAAAACACAGCTGCG 58.204 42.857 15.27 6.98 0.00 5.18
57 58 3.695060 TGATACAAAACCCAACGTGTGTT 59.305 39.130 0.00 0.00 39.43 3.32
61 62 3.851838 GCTGTGATACAAAACCCAACGTG 60.852 47.826 0.00 0.00 0.00 4.49
62 63 2.292292 GCTGTGATACAAAACCCAACGT 59.708 45.455 0.00 0.00 0.00 3.99
63 64 2.664424 CGCTGTGATACAAAACCCAACG 60.664 50.000 0.00 0.00 0.00 4.10
64 65 2.351350 CCGCTGTGATACAAAACCCAAC 60.351 50.000 0.00 0.00 0.00 3.77
81 82 4.325472 CGTTAGATTTAAAACTCGTCCGCT 59.675 41.667 0.66 0.00 0.00 5.52
94 95 7.893124 AGGGATAGAAGACACGTTAGATTTA 57.107 36.000 0.00 0.00 0.00 1.40
184 205 4.201990 TAACAAATGTTAACGGGCAAACGT 60.202 37.500 3.60 0.00 43.06 3.99
226 247 6.566753 CGAAGGAACTCAAGGATTCTTTTGAC 60.567 42.308 0.00 0.00 38.49 3.18
229 250 5.377478 ACGAAGGAACTCAAGGATTCTTTT 58.623 37.500 0.00 0.00 38.49 2.27
230 251 4.974399 ACGAAGGAACTCAAGGATTCTTT 58.026 39.130 0.00 0.00 38.49 2.52
232 253 4.773149 ACTACGAAGGAACTCAAGGATTCT 59.227 41.667 0.00 0.00 38.49 2.40
233 254 5.074584 ACTACGAAGGAACTCAAGGATTC 57.925 43.478 0.00 0.00 38.49 2.52
234 255 6.793505 ATACTACGAAGGAACTCAAGGATT 57.206 37.500 0.00 0.00 38.49 3.01
248 269 4.652421 AGGGAAAGTGCCATATACTACGAA 59.348 41.667 0.00 0.00 0.00 3.85
250 271 4.602340 AGGGAAAGTGCCATATACTACG 57.398 45.455 0.00 0.00 0.00 3.51
252 273 5.454187 CGGAAAGGGAAAGTGCCATATACTA 60.454 44.000 0.00 0.00 0.00 1.82
253 274 4.686122 CGGAAAGGGAAAGTGCCATATACT 60.686 45.833 0.00 0.00 0.00 2.12
254 275 3.564225 CGGAAAGGGAAAGTGCCATATAC 59.436 47.826 0.00 0.00 0.00 1.47
255 276 3.456644 TCGGAAAGGGAAAGTGCCATATA 59.543 43.478 0.00 0.00 0.00 0.86
256 277 2.241176 TCGGAAAGGGAAAGTGCCATAT 59.759 45.455 0.00 0.00 0.00 1.78
257 278 1.631388 TCGGAAAGGGAAAGTGCCATA 59.369 47.619 0.00 0.00 0.00 2.74
328 357 1.963515 GTCCCATGCCACTCTTGTTTT 59.036 47.619 0.00 0.00 0.00 2.43
357 386 2.118404 GGTGTGGTGTGGTGTGGTG 61.118 63.158 0.00 0.00 0.00 4.17
358 387 2.274104 GGTGTGGTGTGGTGTGGT 59.726 61.111 0.00 0.00 0.00 4.16
359 388 2.118404 GTGGTGTGGTGTGGTGTGG 61.118 63.158 0.00 0.00 0.00 4.17
360 389 0.751277 ATGTGGTGTGGTGTGGTGTG 60.751 55.000 0.00 0.00 0.00 3.82
361 390 0.840617 TATGTGGTGTGGTGTGGTGT 59.159 50.000 0.00 0.00 0.00 4.16
362 391 1.202758 AGTATGTGGTGTGGTGTGGTG 60.203 52.381 0.00 0.00 0.00 4.17
363 392 1.136828 AGTATGTGGTGTGGTGTGGT 58.863 50.000 0.00 0.00 0.00 4.16
364 393 1.522668 CAGTATGTGGTGTGGTGTGG 58.477 55.000 0.00 0.00 0.00 4.17
365 394 0.874390 GCAGTATGTGGTGTGGTGTG 59.126 55.000 0.00 0.00 39.31 3.82
366 395 0.764890 AGCAGTATGTGGTGTGGTGT 59.235 50.000 0.00 0.00 39.31 4.16
407 437 4.821589 GAGGCTGCTCCGGTTCCG 62.822 72.222 0.00 4.08 40.77 4.30
628 665 1.153628 CCGAAACCAGGAGTAGCCG 60.154 63.158 0.00 0.00 43.43 5.52
629 666 1.449778 GCCGAAACCAGGAGTAGCC 60.450 63.158 0.00 0.00 0.00 3.93
630 667 1.810030 CGCCGAAACCAGGAGTAGC 60.810 63.158 0.00 0.00 0.00 3.58
631 668 1.810030 GCGCCGAAACCAGGAGTAG 60.810 63.158 0.00 0.00 0.00 2.57
632 669 1.823169 AAGCGCCGAAACCAGGAGTA 61.823 55.000 2.29 0.00 0.00 2.59
633 670 3.178540 AAGCGCCGAAACCAGGAGT 62.179 57.895 2.29 0.00 0.00 3.85
634 671 2.358737 AAGCGCCGAAACCAGGAG 60.359 61.111 2.29 0.00 0.00 3.69
635 672 2.358247 GAAGCGCCGAAACCAGGA 60.358 61.111 2.29 0.00 0.00 3.86
636 673 3.431725 GGAAGCGCCGAAACCAGG 61.432 66.667 2.29 0.00 0.00 4.45
677 714 3.857309 GAGGTGTGGCTGCCTTGCT 62.857 63.158 21.03 0.36 34.81 3.91
704 741 2.461945 TTTTGACCGAACGCGCACA 61.462 52.632 5.73 0.00 35.83 4.57
734 771 4.828925 GGCAGAGGAGCCGTGAGC 62.829 72.222 0.00 0.00 46.12 4.26
750 787 3.909258 AACGTCACCTAGCGCACGG 62.909 63.158 18.10 15.56 36.56 4.94
751 788 2.430244 AACGTCACCTAGCGCACG 60.430 61.111 11.47 12.58 38.24 5.34
752 789 2.380410 CCAACGTCACCTAGCGCAC 61.380 63.158 11.47 0.00 0.00 5.34
753 790 2.048597 CCAACGTCACCTAGCGCA 60.049 61.111 11.47 0.00 0.00 6.09
754 791 2.813908 CCCAACGTCACCTAGCGC 60.814 66.667 0.00 0.00 0.00 5.92
755 792 1.445582 GACCCAACGTCACCTAGCG 60.446 63.158 0.00 0.00 41.54 4.26
756 793 1.445582 CGACCCAACGTCACCTAGC 60.446 63.158 0.00 0.00 42.07 3.42
757 794 1.445582 GCGACCCAACGTCACCTAG 60.446 63.158 0.00 0.00 42.07 3.02
758 795 1.466025 AAGCGACCCAACGTCACCTA 61.466 55.000 0.00 0.00 42.07 3.08
759 796 1.466025 TAAGCGACCCAACGTCACCT 61.466 55.000 0.00 0.00 42.07 4.00
760 797 1.005867 TAAGCGACCCAACGTCACC 60.006 57.895 0.00 0.00 42.07 4.02
761 798 0.598158 TGTAAGCGACCCAACGTCAC 60.598 55.000 0.00 0.00 42.07 3.67
762 799 0.319083 ATGTAAGCGACCCAACGTCA 59.681 50.000 0.00 0.00 42.07 4.35
763 800 0.719465 CATGTAAGCGACCCAACGTC 59.281 55.000 0.00 0.00 38.21 4.34
764 801 0.034337 ACATGTAAGCGACCCAACGT 59.966 50.000 0.00 0.00 35.59 3.99
765 802 1.924524 CTACATGTAAGCGACCCAACG 59.075 52.381 7.06 0.00 0.00 4.10
766 803 2.277084 CCTACATGTAAGCGACCCAAC 58.723 52.381 7.06 0.00 0.00 3.77
767 804 1.406341 GCCTACATGTAAGCGACCCAA 60.406 52.381 10.59 0.00 0.00 4.12
768 805 0.177141 GCCTACATGTAAGCGACCCA 59.823 55.000 10.59 0.00 0.00 4.51
769 806 0.532196 GGCCTACATGTAAGCGACCC 60.532 60.000 17.98 3.12 0.00 4.46
770 807 0.177141 TGGCCTACATGTAAGCGACC 59.823 55.000 17.98 10.27 0.00 4.79
771 808 1.571919 CTGGCCTACATGTAAGCGAC 58.428 55.000 17.98 7.81 0.00 5.19
772 809 0.464036 CCTGGCCTACATGTAAGCGA 59.536 55.000 17.98 14.18 0.00 4.93
773 810 0.178068 ACCTGGCCTACATGTAAGCG 59.822 55.000 17.98 8.81 0.00 4.68
774 811 2.420058 AACCTGGCCTACATGTAAGC 57.580 50.000 16.68 16.68 0.00 3.09
775 812 3.279434 GGAAACCTGGCCTACATGTAAG 58.721 50.000 3.32 1.68 0.00 2.34
776 813 2.645297 TGGAAACCTGGCCTACATGTAA 59.355 45.455 3.32 0.00 0.00 2.41
777 814 2.270858 TGGAAACCTGGCCTACATGTA 58.729 47.619 3.32 5.25 0.00 2.29
778 815 1.072266 TGGAAACCTGGCCTACATGT 58.928 50.000 3.32 2.69 0.00 3.21
779 816 1.818674 GTTGGAAACCTGGCCTACATG 59.181 52.381 3.32 0.00 42.21 3.21
780 817 2.215942 GTTGGAAACCTGGCCTACAT 57.784 50.000 3.32 0.00 42.21 2.29
781 818 3.737702 GTTGGAAACCTGGCCTACA 57.262 52.632 3.32 0.00 42.21 2.74
792 829 2.092158 TGACATGTGGACCTGTTGGAAA 60.092 45.455 1.15 0.00 37.04 3.13
793 830 1.492599 TGACATGTGGACCTGTTGGAA 59.507 47.619 1.15 0.00 37.04 3.53
794 831 1.072173 CTGACATGTGGACCTGTTGGA 59.928 52.381 1.15 0.00 37.04 3.53
795 832 1.202806 ACTGACATGTGGACCTGTTGG 60.203 52.381 1.15 0.00 39.83 3.77
796 833 1.875514 CACTGACATGTGGACCTGTTG 59.124 52.381 1.15 0.00 34.56 3.33
797 834 2.260844 CACTGACATGTGGACCTGTT 57.739 50.000 1.15 0.00 34.56 3.16
805 842 2.337583 CCGTTCTACCACTGACATGTG 58.662 52.381 1.15 0.00 37.66 3.21
806 843 1.337823 GCCGTTCTACCACTGACATGT 60.338 52.381 0.00 0.00 0.00 3.21
807 844 1.337728 TGCCGTTCTACCACTGACATG 60.338 52.381 0.00 0.00 0.00 3.21
808 845 0.973632 TGCCGTTCTACCACTGACAT 59.026 50.000 0.00 0.00 0.00 3.06
809 846 0.317160 CTGCCGTTCTACCACTGACA 59.683 55.000 0.00 0.00 0.00 3.58
810 847 0.389948 CCTGCCGTTCTACCACTGAC 60.390 60.000 0.00 0.00 0.00 3.51
811 848 1.972198 CCTGCCGTTCTACCACTGA 59.028 57.895 0.00 0.00 0.00 3.41
812 849 1.741770 GCCTGCCGTTCTACCACTG 60.742 63.158 0.00 0.00 0.00 3.66
813 850 1.913762 AGCCTGCCGTTCTACCACT 60.914 57.895 0.00 0.00 0.00 4.00
814 851 1.741770 CAGCCTGCCGTTCTACCAC 60.742 63.158 0.00 0.00 0.00 4.16
815 852 2.662596 CAGCCTGCCGTTCTACCA 59.337 61.111 0.00 0.00 0.00 3.25
816 853 2.820037 GCAGCCTGCCGTTCTACC 60.820 66.667 5.06 0.00 37.42 3.18
825 862 4.752879 TACCGTTCGGCAGCCTGC 62.753 66.667 8.55 8.55 44.08 4.85
826 863 2.509336 CTACCGTTCGGCAGCCTG 60.509 66.667 10.54 3.19 0.00 4.85
827 864 2.678934 TCTACCGTTCGGCAGCCT 60.679 61.111 10.54 0.00 0.00 4.58
828 865 2.202756 CTCTACCGTTCGGCAGCC 60.203 66.667 11.32 0.00 0.00 4.85
829 866 2.017559 ATCCTCTACCGTTCGGCAGC 62.018 60.000 11.32 0.00 0.00 5.25
830 867 0.030908 GATCCTCTACCGTTCGGCAG 59.969 60.000 11.32 8.13 0.00 4.85
831 868 0.395311 AGATCCTCTACCGTTCGGCA 60.395 55.000 11.32 0.00 0.00 5.69
832 869 0.745468 AAGATCCTCTACCGTTCGGC 59.255 55.000 11.32 0.00 0.00 5.54
833 870 2.030981 GCTAAGATCCTCTACCGTTCGG 60.031 54.545 9.81 9.81 0.00 4.30
834 871 2.349627 CGCTAAGATCCTCTACCGTTCG 60.350 54.545 0.00 0.00 0.00 3.95
835 872 2.605097 GCGCTAAGATCCTCTACCGTTC 60.605 54.545 0.00 0.00 0.00 3.95
836 873 1.337387 GCGCTAAGATCCTCTACCGTT 59.663 52.381 0.00 0.00 0.00 4.44
837 874 0.953003 GCGCTAAGATCCTCTACCGT 59.047 55.000 0.00 0.00 0.00 4.83
838 875 0.110147 CGCGCTAAGATCCTCTACCG 60.110 60.000 5.56 0.00 0.00 4.02
839 876 0.387494 GCGCGCTAAGATCCTCTACC 60.387 60.000 26.67 0.00 0.00 3.18
840 877 0.387494 GGCGCGCTAAGATCCTCTAC 60.387 60.000 32.29 5.07 0.00 2.59
841 878 1.853114 CGGCGCGCTAAGATCCTCTA 61.853 60.000 32.29 0.00 0.00 2.43
842 879 2.731374 GGCGCGCTAAGATCCTCT 59.269 61.111 32.29 0.00 0.00 3.69
843 880 2.731348 CGGCGCGCTAAGATCCTC 60.731 66.667 32.29 9.74 0.00 3.71
951 994 4.736896 GCCGCCTTTCCGTCGTCT 62.737 66.667 0.00 0.00 0.00 4.18
988 1031 2.202932 CCCCATCCTTCGCTCGTG 60.203 66.667 0.00 0.00 0.00 4.35
1143 1196 1.446966 GCTCTGCGTCTGGAACTCC 60.447 63.158 0.00 0.00 0.00 3.85
1362 1415 3.147553 AGGAAAGAAGGAAGGAAGCAC 57.852 47.619 0.00 0.00 0.00 4.40
1376 1429 8.138074 GGGAGCTAATTAATTAAGCAAGGAAAG 58.862 37.037 21.34 7.34 0.00 2.62
1377 1430 7.617723 TGGGAGCTAATTAATTAAGCAAGGAAA 59.382 33.333 21.34 8.00 0.00 3.13
1380 1433 6.959639 TGGGAGCTAATTAATTAAGCAAGG 57.040 37.500 21.34 8.22 0.00 3.61
1381 1434 6.865205 GCATGGGAGCTAATTAATTAAGCAAG 59.135 38.462 21.34 10.01 0.00 4.01
1383 1436 6.070656 AGCATGGGAGCTAATTAATTAAGCA 58.929 36.000 21.34 9.34 44.50 3.91
1384 1437 6.581171 AGCATGGGAGCTAATTAATTAAGC 57.419 37.500 9.15 13.17 44.50 3.09
1385 1438 6.865205 GCAAGCATGGGAGCTAATTAATTAAG 59.135 38.462 9.15 5.20 45.89 1.85
1389 1442 4.477249 AGCAAGCATGGGAGCTAATTAAT 58.523 39.130 0.00 0.00 45.89 1.40
1391 1444 3.582998 AGCAAGCATGGGAGCTAATTA 57.417 42.857 0.00 0.00 45.89 1.40
1392 1445 2.449137 AGCAAGCATGGGAGCTAATT 57.551 45.000 0.00 0.00 45.89 1.40
1393 1446 2.449137 AAGCAAGCATGGGAGCTAAT 57.551 45.000 0.00 0.00 45.89 1.73
1394 1447 2.643551 GTAAGCAAGCATGGGAGCTAA 58.356 47.619 0.00 0.00 45.89 3.09
1428 1481 0.447406 TCAATTGATCCAAGCGCACG 59.553 50.000 11.47 0.00 0.00 5.34
1432 1485 4.644103 AAGGAATCAATTGATCCAAGCG 57.356 40.909 25.70 0.00 32.75 4.68
1502 1555 2.430367 GCCGACCAGGACCAACTT 59.570 61.111 0.00 0.00 45.00 2.66
1505 1558 3.998672 GACGCCGACCAGGACCAA 61.999 66.667 0.00 0.00 45.00 3.67
1583 1636 4.036971 ACAGCTATGTATCGGAGAACACTC 59.963 45.833 0.00 0.00 38.09 3.51
1593 1646 5.864474 GGGACAATTCTACAGCTATGTATCG 59.136 44.000 0.00 0.00 41.05 2.92
1604 1660 1.646912 TCCGGTGGGACAATTCTACA 58.353 50.000 0.00 0.00 44.16 2.74
1702 1758 2.357034 CACCCGACGTGGTCCTTG 60.357 66.667 0.00 0.00 38.96 3.61
1762 1818 7.402071 AGGATAACTTCTATACTTGTTCCCACA 59.598 37.037 0.00 0.00 0.00 4.17
1763 1819 7.793036 AGGATAACTTCTATACTTGTTCCCAC 58.207 38.462 0.00 0.00 0.00 4.61
1767 1849 7.861872 GTCGGAGGATAACTTCTATACTTGTTC 59.138 40.741 0.00 0.00 0.00 3.18
1806 1890 2.171840 GCAGTCCTGAGTCCTGACTTA 58.828 52.381 8.51 0.00 42.66 2.24
1817 1901 3.072330 TCACCACAAATTAGCAGTCCTGA 59.928 43.478 0.00 0.00 0.00 3.86
1855 1939 3.012518 CAGCCTCCGATGTCAGAAATTT 58.987 45.455 0.00 0.00 0.00 1.82
2021 2268 4.527509 TTCCAACAGCAACAAGTGAAAA 57.472 36.364 0.00 0.00 0.00 2.29
2053 2300 6.832384 ACCAAGACAATGCATCTTTCTATGAT 59.168 34.615 0.00 0.00 34.08 2.45
2054 2301 6.182627 ACCAAGACAATGCATCTTTCTATGA 58.817 36.000 0.00 0.00 34.08 2.15
2090 2337 6.926826 CCTACATAAAGTCGCCATGTACATAA 59.073 38.462 8.32 0.00 34.78 1.90
2091 2338 6.265876 TCCTACATAAAGTCGCCATGTACATA 59.734 38.462 8.32 0.00 34.78 2.29
2111 2358 4.142138 CCTTCTGGTAGTGACACATCCTAC 60.142 50.000 8.59 1.39 32.24 3.18
2177 2434 5.815581 AGGATACATTTGTTCAGCCTAACA 58.184 37.500 0.00 0.00 36.90 2.41
2199 2456 6.064846 ACACAAATTGCAACTAGAGTCAAG 57.935 37.500 0.00 0.00 0.00 3.02
2224 2481 2.093890 TGGCATGCCAATTGACAGTAG 58.906 47.619 36.95 0.00 44.12 2.57
2252 2509 3.432186 CGGATGCATTGTCCTTTCTCCTA 60.432 47.826 0.00 0.00 33.46 2.94
2274 2531 7.108847 TCCGTACTAGGTAGCTAGGATTATTC 58.891 42.308 27.89 10.45 0.00 1.75
2278 2535 4.350520 ACTCCGTACTAGGTAGCTAGGATT 59.649 45.833 27.89 13.29 0.00 3.01
2291 2548 7.149973 GCCAAATGACAATATACTCCGTACTA 58.850 38.462 0.00 0.00 0.00 1.82
2292 2549 5.989777 GCCAAATGACAATATACTCCGTACT 59.010 40.000 0.00 0.00 0.00 2.73
2293 2550 5.756347 TGCCAAATGACAATATACTCCGTAC 59.244 40.000 0.00 0.00 0.00 3.67
2294 2551 5.919755 TGCCAAATGACAATATACTCCGTA 58.080 37.500 0.00 0.00 0.00 4.02
2295 2552 4.776349 TGCCAAATGACAATATACTCCGT 58.224 39.130 0.00 0.00 0.00 4.69
2296 2553 5.947228 ATGCCAAATGACAATATACTCCG 57.053 39.130 0.00 0.00 0.00 4.63
2297 2554 7.744087 TGTATGCCAAATGACAATATACTCC 57.256 36.000 0.00 0.00 0.00 3.85
2298 2555 9.669353 CTTTGTATGCCAAATGACAATATACTC 57.331 33.333 0.00 0.00 42.02 2.59
2299 2556 9.189156 ACTTTGTATGCCAAATGACAATATACT 57.811 29.630 0.00 0.00 42.02 2.12
2300 2557 9.801873 AACTTTGTATGCCAAATGACAATATAC 57.198 29.630 0.00 0.00 42.02 1.47
2302 2559 9.723601 AAAACTTTGTATGCCAAATGACAATAT 57.276 25.926 0.00 0.00 42.02 1.28
2309 2571 6.845280 CGTTTCAAAACTTTGTATGCCAAATG 59.155 34.615 4.28 0.00 42.02 2.32
2335 2597 1.002900 CACCGTGGTGCTTGTTTAGTG 60.003 52.381 6.03 0.00 39.39 2.74
2365 2627 8.755941 CATCGTGTTATGTTAGTATCTTCCAAG 58.244 37.037 0.00 0.00 0.00 3.61
2366 2628 7.709182 CCATCGTGTTATGTTAGTATCTTCCAA 59.291 37.037 0.00 0.00 0.00 3.53
2367 2629 7.147794 ACCATCGTGTTATGTTAGTATCTTCCA 60.148 37.037 0.00 0.00 0.00 3.53
2368 2630 7.208080 ACCATCGTGTTATGTTAGTATCTTCC 58.792 38.462 0.00 0.00 0.00 3.46
2369 2631 7.113124 CGACCATCGTGTTATGTTAGTATCTTC 59.887 40.741 0.00 0.00 34.72 2.87
2370 2632 6.916387 CGACCATCGTGTTATGTTAGTATCTT 59.084 38.462 0.00 0.00 34.72 2.40
2371 2633 6.261603 TCGACCATCGTGTTATGTTAGTATCT 59.738 38.462 0.00 0.00 41.35 1.98
2457 2719 6.936900 AGTAAAAGCATTCTGAGAAACTGCTA 59.063 34.615 20.00 5.86 42.05 3.49
2478 2740 4.470334 TGTATGCTGAGACATGCAGTAA 57.530 40.909 0.00 0.00 42.74 2.24
2484 2746 9.486497 AGTCTATAAAATGTATGCTGAGACATG 57.514 33.333 0.00 0.00 34.20 3.21
2528 2790 2.223900 GGGATCAAGCATAAGCAAAGCC 60.224 50.000 0.00 0.00 45.49 4.35
2586 2849 8.345565 CCACACCTATGCAATCTAACTATTTTC 58.654 37.037 0.00 0.00 0.00 2.29
2628 2898 6.065976 TCAACAATGCCTATCATATAGGGG 57.934 41.667 13.52 0.00 34.33 4.79
2630 2900 7.765819 TCGATTCAACAATGCCTATCATATAGG 59.234 37.037 8.37 8.37 34.33 2.57
2631 2901 8.707938 TCGATTCAACAATGCCTATCATATAG 57.292 34.615 0.00 0.00 34.33 1.31
2645 2915 6.252967 AGCACAATGTTATCGATTCAACAA 57.747 33.333 15.68 0.00 38.11 2.83
2750 3021 4.136051 AGGTGGCAAAATGAAACCAAATG 58.864 39.130 0.00 0.00 33.03 2.32
2770 3041 8.166422 AGGGATACGATTTATTGCTTTTAAGG 57.834 34.615 0.00 0.00 37.60 2.69
2782 3053 5.897851 TCATTCCCAAGGGATACGATTTA 57.102 39.130 9.01 0.00 44.74 1.40
2897 3170 1.672881 GCACAAGGGACATGTATCAGC 59.327 52.381 0.00 0.00 38.63 4.26
2898 3171 2.941064 CTGCACAAGGGACATGTATCAG 59.059 50.000 0.00 0.00 38.63 2.90
2901 3174 2.305635 TGACTGCACAAGGGACATGTAT 59.694 45.455 0.00 0.00 38.63 2.29
2951 3224 5.356882 TCAAGGAAAACGCAGATGTAAAG 57.643 39.130 0.00 0.00 0.00 1.85
2958 3231 5.428253 AGCTAATATCAAGGAAAACGCAGA 58.572 37.500 0.00 0.00 0.00 4.26
2984 3257 9.098355 CGATATGTGAAAAGGAGAATTGTTCTA 57.902 33.333 0.00 0.00 40.87 2.10
2985 3258 7.414540 GCGATATGTGAAAAGGAGAATTGTTCT 60.415 37.037 0.00 0.00 44.21 3.01
3034 3316 7.015226 TGCATTAGATTTGAGGATACGTTTG 57.985 36.000 0.00 0.00 46.39 2.93
3160 3442 2.534042 TGAAGAAGAGTCCCTCGGAT 57.466 50.000 0.00 0.00 35.36 4.18
3163 3445 2.100584 CTCCATGAAGAAGAGTCCCTCG 59.899 54.545 0.00 0.00 35.36 4.63
3217 3499 0.528466 TGATGACGAGCTCGAATGCC 60.528 55.000 40.58 23.61 43.02 4.40
3620 3923 2.746277 GCGCACCGGATTGGAGTT 60.746 61.111 9.46 0.00 42.00 3.01
3626 3929 2.709883 CCATTTGGCGCACCGGATT 61.710 57.895 9.46 0.00 39.70 3.01
3657 3960 3.758931 GCGTTGGGTTGGATGGCC 61.759 66.667 0.00 0.00 0.00 5.36
3659 3962 4.114997 GCGCGTTGGGTTGGATGG 62.115 66.667 8.43 0.00 0.00 3.51
3666 3970 3.842925 ATTCAGTGGCGCGTTGGGT 62.843 57.895 8.43 0.00 0.00 4.51
3672 3976 1.584483 GCAATCATTCAGTGGCGCG 60.584 57.895 0.00 0.00 0.00 6.86
3675 3979 0.685458 AGGGGCAATCATTCAGTGGC 60.685 55.000 0.00 0.00 44.65 5.01
3711 4015 4.880537 CTAGCTCCGCCACCGCAG 62.881 72.222 0.00 0.00 34.03 5.18
3713 4017 3.659089 TTTCTAGCTCCGCCACCGC 62.659 63.158 0.00 0.00 0.00 5.68
3714 4018 0.462047 ATTTTCTAGCTCCGCCACCG 60.462 55.000 0.00 0.00 0.00 4.94
3715 4019 2.614829 TATTTTCTAGCTCCGCCACC 57.385 50.000 0.00 0.00 0.00 4.61
3716 4020 3.467803 ACATATTTTCTAGCTCCGCCAC 58.532 45.455 0.00 0.00 0.00 5.01
3717 4021 3.838244 ACATATTTTCTAGCTCCGCCA 57.162 42.857 0.00 0.00 0.00 5.69
3718 4022 3.673809 CGTACATATTTTCTAGCTCCGCC 59.326 47.826 0.00 0.00 0.00 6.13
3719 4023 4.296690 ACGTACATATTTTCTAGCTCCGC 58.703 43.478 0.00 0.00 0.00 5.54
3720 4024 9.275231 CTAATACGTACATATTTTCTAGCTCCG 57.725 37.037 0.00 0.00 0.00 4.63
3721 4025 9.570488 CCTAATACGTACATATTTTCTAGCTCC 57.430 37.037 0.00 0.00 0.00 4.70
3722 4026 9.570488 CCCTAATACGTACATATTTTCTAGCTC 57.430 37.037 0.00 0.00 0.00 4.09
3723 4027 9.305555 TCCCTAATACGTACATATTTTCTAGCT 57.694 33.333 0.00 0.00 0.00 3.32
3724 4028 9.570488 CTCCCTAATACGTACATATTTTCTAGC 57.430 37.037 0.00 0.00 0.00 3.42
3726 4030 9.812347 TCCTCCCTAATACGTACATATTTTCTA 57.188 33.333 0.00 0.00 0.00 2.10
3727 4031 8.583296 GTCCTCCCTAATACGTACATATTTTCT 58.417 37.037 0.00 0.00 0.00 2.52
3728 4032 8.362639 TGTCCTCCCTAATACGTACATATTTTC 58.637 37.037 0.00 0.00 0.00 2.29
3729 4033 8.253867 TGTCCTCCCTAATACGTACATATTTT 57.746 34.615 0.00 0.00 0.00 1.82
3730 4034 7.844493 TGTCCTCCCTAATACGTACATATTT 57.156 36.000 0.00 0.00 0.00 1.40
3731 4035 7.508296 ACTTGTCCTCCCTAATACGTACATATT 59.492 37.037 0.00 0.00 0.00 1.28
3732 4036 7.008941 ACTTGTCCTCCCTAATACGTACATAT 58.991 38.462 0.00 0.00 0.00 1.78
3733 4037 6.263842 CACTTGTCCTCCCTAATACGTACATA 59.736 42.308 0.00 0.00 0.00 2.29
3734 4038 5.068723 CACTTGTCCTCCCTAATACGTACAT 59.931 44.000 0.00 0.00 0.00 2.29
3735 4039 4.400251 CACTTGTCCTCCCTAATACGTACA 59.600 45.833 0.00 0.00 0.00 2.90
3736 4040 4.400567 ACACTTGTCCTCCCTAATACGTAC 59.599 45.833 0.00 0.00 0.00 3.67
3737 4041 4.603131 ACACTTGTCCTCCCTAATACGTA 58.397 43.478 0.00 0.00 0.00 3.57
3738 4042 3.438183 ACACTTGTCCTCCCTAATACGT 58.562 45.455 0.00 0.00 0.00 3.57
3739 4043 4.181578 CAACACTTGTCCTCCCTAATACG 58.818 47.826 0.00 0.00 0.00 3.06
3740 4044 3.939592 GCAACACTTGTCCTCCCTAATAC 59.060 47.826 0.00 0.00 0.00 1.89
3741 4045 3.844211 AGCAACACTTGTCCTCCCTAATA 59.156 43.478 0.00 0.00 0.00 0.98
3742 4046 2.644798 AGCAACACTTGTCCTCCCTAAT 59.355 45.455 0.00 0.00 0.00 1.73
3743 4047 2.054799 AGCAACACTTGTCCTCCCTAA 58.945 47.619 0.00 0.00 0.00 2.69
3744 4048 1.729586 AGCAACACTTGTCCTCCCTA 58.270 50.000 0.00 0.00 0.00 3.53
3745 4049 1.729586 TAGCAACACTTGTCCTCCCT 58.270 50.000 0.00 0.00 0.00 4.20
3746 4050 2.561478 TTAGCAACACTTGTCCTCCC 57.439 50.000 0.00 0.00 0.00 4.30
3747 4051 3.630312 TGTTTTAGCAACACTTGTCCTCC 59.370 43.478 0.00 0.00 0.00 4.30
3748 4052 4.261197 CCTGTTTTAGCAACACTTGTCCTC 60.261 45.833 0.00 0.00 0.00 3.71
3749 4053 3.632145 CCTGTTTTAGCAACACTTGTCCT 59.368 43.478 0.00 0.00 0.00 3.85
3750 4054 3.380320 ACCTGTTTTAGCAACACTTGTCC 59.620 43.478 0.00 0.00 0.00 4.02
3751 4055 4.632538 ACCTGTTTTAGCAACACTTGTC 57.367 40.909 0.00 0.00 0.00 3.18
3752 4056 5.067283 CCTAACCTGTTTTAGCAACACTTGT 59.933 40.000 0.00 0.00 0.00 3.16
3753 4057 5.507315 CCCTAACCTGTTTTAGCAACACTTG 60.507 44.000 0.00 0.00 0.00 3.16
3754 4058 4.583073 CCCTAACCTGTTTTAGCAACACTT 59.417 41.667 0.00 0.00 0.00 3.16
3755 4059 4.141344 TCCCTAACCTGTTTTAGCAACACT 60.141 41.667 0.00 0.00 0.00 3.55
3756 4060 4.139038 TCCCTAACCTGTTTTAGCAACAC 58.861 43.478 0.00 0.00 0.00 3.32
3757 4061 4.394729 CTCCCTAACCTGTTTTAGCAACA 58.605 43.478 0.00 0.00 0.00 3.33
3758 4062 3.756963 CCTCCCTAACCTGTTTTAGCAAC 59.243 47.826 0.00 0.00 0.00 4.17
3759 4063 3.245122 CCCTCCCTAACCTGTTTTAGCAA 60.245 47.826 0.00 0.00 0.00 3.91
3760 4064 2.307686 CCCTCCCTAACCTGTTTTAGCA 59.692 50.000 0.00 0.00 0.00 3.49
3761 4065 2.356844 CCCCTCCCTAACCTGTTTTAGC 60.357 54.545 0.00 0.00 0.00 3.09
3762 4066 2.356844 GCCCCTCCCTAACCTGTTTTAG 60.357 54.545 0.00 0.00 0.00 1.85
3763 4067 1.637035 GCCCCTCCCTAACCTGTTTTA 59.363 52.381 0.00 0.00 0.00 1.52
3764 4068 0.408309 GCCCCTCCCTAACCTGTTTT 59.592 55.000 0.00 0.00 0.00 2.43
3765 4069 0.774491 TGCCCCTCCCTAACCTGTTT 60.774 55.000 0.00 0.00 0.00 2.83
3766 4070 0.774491 TTGCCCCTCCCTAACCTGTT 60.774 55.000 0.00 0.00 0.00 3.16
3767 4071 0.774491 TTTGCCCCTCCCTAACCTGT 60.774 55.000 0.00 0.00 0.00 4.00
3768 4072 0.323451 GTTTGCCCCTCCCTAACCTG 60.323 60.000 0.00 0.00 0.00 4.00
3769 4073 0.477795 AGTTTGCCCCTCCCTAACCT 60.478 55.000 0.00 0.00 0.00 3.50
3770 4074 1.292085 TAGTTTGCCCCTCCCTAACC 58.708 55.000 0.00 0.00 0.00 2.85
3771 4075 3.053917 TCAATAGTTTGCCCCTCCCTAAC 60.054 47.826 0.00 0.00 32.61 2.34
3772 4076 3.194620 TCAATAGTTTGCCCCTCCCTAA 58.805 45.455 0.00 0.00 32.61 2.69
3773 4077 2.853430 TCAATAGTTTGCCCCTCCCTA 58.147 47.619 0.00 0.00 32.61 3.53
3774 4078 1.681229 TCAATAGTTTGCCCCTCCCT 58.319 50.000 0.00 0.00 32.61 4.20
3775 4079 2.525105 TTCAATAGTTTGCCCCTCCC 57.475 50.000 0.00 0.00 32.61 4.30
3776 4080 5.420725 AATTTTCAATAGTTTGCCCCTCC 57.579 39.130 0.00 0.00 32.61 4.30
3777 4081 6.463360 TCAAATTTTCAATAGTTTGCCCCTC 58.537 36.000 0.00 0.00 32.95 4.30
3778 4082 6.432403 TCAAATTTTCAATAGTTTGCCCCT 57.568 33.333 0.00 0.00 32.95 4.79
3779 4083 7.686438 AATCAAATTTTCAATAGTTTGCCCC 57.314 32.000 0.00 0.00 32.95 5.80
3780 4084 9.964303 AAAAATCAAATTTTCAATAGTTTGCCC 57.036 25.926 0.00 0.00 41.30 5.36
3807 4111 8.859090 TGCCATAATTACTAATAATTTGCTGCT 58.141 29.630 0.00 0.00 40.68 4.24
3808 4112 8.915654 GTGCCATAATTACTAATAATTTGCTGC 58.084 33.333 0.00 0.00 40.68 5.25
3818 4122 9.442047 GCTATGAAGAGTGCCATAATTACTAAT 57.558 33.333 0.00 0.00 0.00 1.73
3819 4123 8.428852 TGCTATGAAGAGTGCCATAATTACTAA 58.571 33.333 0.00 0.00 0.00 2.24
3820 4124 7.962441 TGCTATGAAGAGTGCCATAATTACTA 58.038 34.615 0.00 0.00 0.00 1.82
3821 4125 6.830912 TGCTATGAAGAGTGCCATAATTACT 58.169 36.000 0.00 0.00 0.00 2.24
3822 4126 7.496529 TTGCTATGAAGAGTGCCATAATTAC 57.503 36.000 0.00 0.00 0.00 1.89
3823 4127 8.696043 ATTTGCTATGAAGAGTGCCATAATTA 57.304 30.769 0.00 0.00 0.00 1.40
3824 4128 7.286087 TGATTTGCTATGAAGAGTGCCATAATT 59.714 33.333 0.00 0.00 0.00 1.40
3825 4129 6.774170 TGATTTGCTATGAAGAGTGCCATAAT 59.226 34.615 0.00 0.00 0.00 1.28
3826 4130 6.121590 TGATTTGCTATGAAGAGTGCCATAA 58.878 36.000 0.00 0.00 0.00 1.90
3827 4131 5.683681 TGATTTGCTATGAAGAGTGCCATA 58.316 37.500 0.00 0.00 0.00 2.74
3828 4132 4.529897 TGATTTGCTATGAAGAGTGCCAT 58.470 39.130 0.00 0.00 0.00 4.40
3829 4133 3.954200 TGATTTGCTATGAAGAGTGCCA 58.046 40.909 0.00 0.00 0.00 4.92
3830 4134 4.156556 TGTTGATTTGCTATGAAGAGTGCC 59.843 41.667 0.00 0.00 0.00 5.01
3831 4135 5.091431 GTGTTGATTTGCTATGAAGAGTGC 58.909 41.667 0.00 0.00 0.00 4.40
3832 4136 6.492007 AGTGTTGATTTGCTATGAAGAGTG 57.508 37.500 0.00 0.00 0.00 3.51
3833 4137 8.621532 TTTAGTGTTGATTTGCTATGAAGAGT 57.378 30.769 0.00 0.00 0.00 3.24
3836 4140 9.294030 GGAATTTAGTGTTGATTTGCTATGAAG 57.706 33.333 0.00 0.00 0.00 3.02
3837 4141 9.023962 AGGAATTTAGTGTTGATTTGCTATGAA 57.976 29.630 0.00 0.00 0.00 2.57
3838 4142 8.579850 AGGAATTTAGTGTTGATTTGCTATGA 57.420 30.769 0.00 0.00 0.00 2.15
3842 4146 8.806146 ACATAAGGAATTTAGTGTTGATTTGCT 58.194 29.630 0.00 0.00 0.00 3.91
3843 4147 8.986477 ACATAAGGAATTTAGTGTTGATTTGC 57.014 30.769 0.00 0.00 0.00 3.68
3846 4150 9.965902 AGAGACATAAGGAATTTAGTGTTGATT 57.034 29.630 0.00 0.00 0.00 2.57
3847 4151 9.606631 GAGAGACATAAGGAATTTAGTGTTGAT 57.393 33.333 0.00 0.00 0.00 2.57
3848 4152 8.816894 AGAGAGACATAAGGAATTTAGTGTTGA 58.183 33.333 0.00 0.00 0.00 3.18
3849 4153 9.442047 AAGAGAGACATAAGGAATTTAGTGTTG 57.558 33.333 0.00 0.00 0.00 3.33
3850 4154 9.660180 GAAGAGAGACATAAGGAATTTAGTGTT 57.340 33.333 0.00 0.00 0.00 3.32
3851 4155 8.816894 TGAAGAGAGACATAAGGAATTTAGTGT 58.183 33.333 0.00 0.00 0.00 3.55
3852 4156 9.829507 ATGAAGAGAGACATAAGGAATTTAGTG 57.170 33.333 0.00 0.00 0.00 2.74
3855 4159 9.988815 GCTATGAAGAGAGACATAAGGAATTTA 57.011 33.333 0.00 0.00 0.00 1.40
3856 4160 8.489489 TGCTATGAAGAGAGACATAAGGAATTT 58.511 33.333 0.00 0.00 0.00 1.82
3857 4161 8.027524 TGCTATGAAGAGAGACATAAGGAATT 57.972 34.615 0.00 0.00 0.00 2.17
3858 4162 7.609097 TGCTATGAAGAGAGACATAAGGAAT 57.391 36.000 0.00 0.00 0.00 3.01
3859 4163 7.423844 TTGCTATGAAGAGAGACATAAGGAA 57.576 36.000 0.00 0.00 0.00 3.36
3860 4164 7.609097 ATTGCTATGAAGAGAGACATAAGGA 57.391 36.000 0.00 0.00 0.00 3.36
3861 4165 7.930325 TGAATTGCTATGAAGAGAGACATAAGG 59.070 37.037 0.00 0.00 0.00 2.69
3862 4166 8.883954 TGAATTGCTATGAAGAGAGACATAAG 57.116 34.615 0.00 0.00 0.00 1.73
3863 4167 9.102757 GTTGAATTGCTATGAAGAGAGACATAA 57.897 33.333 0.00 0.00 0.00 1.90
3864 4168 8.260114 TGTTGAATTGCTATGAAGAGAGACATA 58.740 33.333 0.00 0.00 0.00 2.29
3865 4169 7.065563 GTGTTGAATTGCTATGAAGAGAGACAT 59.934 37.037 0.00 0.00 0.00 3.06
3866 4170 6.369890 GTGTTGAATTGCTATGAAGAGAGACA 59.630 38.462 0.00 0.00 0.00 3.41
3867 4171 6.593382 AGTGTTGAATTGCTATGAAGAGAGAC 59.407 38.462 0.00 0.00 0.00 3.36
3868 4172 6.705302 AGTGTTGAATTGCTATGAAGAGAGA 58.295 36.000 0.00 0.00 0.00 3.10
3869 4173 6.981762 AGTGTTGAATTGCTATGAAGAGAG 57.018 37.500 0.00 0.00 0.00 3.20
3870 4174 8.846943 TTTAGTGTTGAATTGCTATGAAGAGA 57.153 30.769 0.00 0.00 0.00 3.10
3873 4177 9.294030 GGAATTTAGTGTTGAATTGCTATGAAG 57.706 33.333 0.00 0.00 32.79 3.02
3874 4178 9.023962 AGGAATTTAGTGTTGAATTGCTATGAA 57.976 29.630 1.76 0.00 40.59 2.57
3875 4179 8.579850 AGGAATTTAGTGTTGAATTGCTATGA 57.420 30.769 1.76 0.00 40.59 2.15
3879 4183 8.806146 ACATAAGGAATTTAGTGTTGAATTGCT 58.194 29.630 0.00 0.00 43.03 3.91
3880 4184 8.986477 ACATAAGGAATTTAGTGTTGAATTGC 57.014 30.769 0.00 0.00 34.86 3.56
3883 4187 9.178758 GGAGACATAAGGAATTTAGTGTTGAAT 57.821 33.333 0.00 0.00 0.00 2.57
3884 4188 7.333423 CGGAGACATAAGGAATTTAGTGTTGAA 59.667 37.037 0.00 0.00 0.00 2.69
3885 4189 6.816640 CGGAGACATAAGGAATTTAGTGTTGA 59.183 38.462 0.00 0.00 0.00 3.18
3886 4190 6.456988 GCGGAGACATAAGGAATTTAGTGTTG 60.457 42.308 0.00 0.00 0.00 3.33
3887 4191 5.585047 GCGGAGACATAAGGAATTTAGTGTT 59.415 40.000 0.00 0.00 0.00 3.32
3888 4192 5.116882 GCGGAGACATAAGGAATTTAGTGT 58.883 41.667 0.00 0.00 0.00 3.55
3889 4193 4.511826 GGCGGAGACATAAGGAATTTAGTG 59.488 45.833 0.00 0.00 31.66 2.74
3890 4194 4.704965 GGCGGAGACATAAGGAATTTAGT 58.295 43.478 0.00 0.00 31.66 2.24
3904 4208 0.388294 GGGTATACAGTGGCGGAGAC 59.612 60.000 5.01 0.00 0.00 3.36
3905 4209 1.105167 CGGGTATACAGTGGCGGAGA 61.105 60.000 5.01 0.00 0.00 3.71
3906 4210 1.362717 CGGGTATACAGTGGCGGAG 59.637 63.158 5.01 0.00 0.00 4.63
3907 4211 2.129146 CCGGGTATACAGTGGCGGA 61.129 63.158 5.01 0.00 0.00 5.54
3908 4212 2.083835 CTCCGGGTATACAGTGGCGG 62.084 65.000 0.00 0.00 0.00 6.13
3909 4213 1.362717 CTCCGGGTATACAGTGGCG 59.637 63.158 0.00 0.00 0.00 5.69
3910 4214 1.069258 GCTCCGGGTATACAGTGGC 59.931 63.158 0.00 0.00 0.00 5.01
3911 4215 0.104304 GTGCTCCGGGTATACAGTGG 59.896 60.000 0.00 3.20 0.00 4.00
3912 4216 1.067212 GAGTGCTCCGGGTATACAGTG 59.933 57.143 0.00 0.00 0.00 3.66
3913 4217 1.063867 AGAGTGCTCCGGGTATACAGT 60.064 52.381 0.00 0.00 0.00 3.55
3914 4218 1.693627 AGAGTGCTCCGGGTATACAG 58.306 55.000 0.00 0.00 0.00 2.74
3915 4219 3.301794 TTAGAGTGCTCCGGGTATACA 57.698 47.619 0.00 0.00 0.00 2.29
3916 4220 4.868314 ATTTAGAGTGCTCCGGGTATAC 57.132 45.455 0.00 0.00 0.00 1.47
3921 4225 3.753294 ACATATTTAGAGTGCTCCGGG 57.247 47.619 0.00 0.00 0.00 5.73
3968 4272 9.740239 GCATTGAGATATTTGTACAACATGATT 57.260 29.630 8.07 0.00 0.00 2.57
4050 4354 9.673454 CGGTTAAGCTAAATTCAAGTTTAAACT 57.327 29.630 15.22 15.22 36.04 2.66
4053 4357 8.291740 GTCCGGTTAAGCTAAATTCAAGTTTAA 58.708 33.333 0.00 6.00 30.27 1.52
4104 4408 4.622740 GCTTTAGATGAACATTTGTGCACC 59.377 41.667 15.69 0.00 36.19 5.01
4106 4410 5.710513 AGCTTTAGATGAACATTTGTGCA 57.289 34.783 0.00 0.00 38.11 4.57
4117 4421 8.072321 AGAAACTCATGAGTAGCTTTAGATGA 57.928 34.615 28.10 0.00 41.58 2.92
4123 4437 6.373774 CCATCAAGAAACTCATGAGTAGCTTT 59.626 38.462 28.10 18.36 41.58 3.51
4143 4457 7.416817 CAAATACATAAACAGATTCGCCATCA 58.583 34.615 0.00 0.00 33.75 3.07
4144 4458 6.857964 CCAAATACATAAACAGATTCGCCATC 59.142 38.462 0.00 0.00 0.00 3.51
4200 4514 7.407393 TGAATGATCATGGCAAACTTTCATA 57.593 32.000 9.46 0.00 0.00 2.15
4201 4515 6.288941 TGAATGATCATGGCAAACTTTCAT 57.711 33.333 9.46 0.00 0.00 2.57
4203 4517 6.570692 AGATGAATGATCATGGCAAACTTTC 58.429 36.000 9.46 5.34 46.30 2.62
4204 4518 6.406624 GGAGATGAATGATCATGGCAAACTTT 60.407 38.462 9.46 0.00 46.30 2.66
4206 4520 4.583489 GGAGATGAATGATCATGGCAAACT 59.417 41.667 9.46 13.27 46.30 2.66
4207 4521 4.583489 AGGAGATGAATGATCATGGCAAAC 59.417 41.667 9.46 9.36 46.30 2.93
4208 4522 4.800023 AGGAGATGAATGATCATGGCAAA 58.200 39.130 9.46 0.00 46.30 3.68
4209 4523 4.141344 TGAGGAGATGAATGATCATGGCAA 60.141 41.667 9.46 0.00 46.30 4.52
4210 4524 3.393278 TGAGGAGATGAATGATCATGGCA 59.607 43.478 9.46 11.21 46.30 4.92
4211 4525 4.017177 TGAGGAGATGAATGATCATGGC 57.983 45.455 9.46 5.44 46.30 4.40
4212 4526 6.062749 AGTTTGAGGAGATGAATGATCATGG 58.937 40.000 9.46 0.00 46.30 3.66
4213 4527 6.993308 AGAGTTTGAGGAGATGAATGATCATG 59.007 38.462 9.46 0.00 46.30 3.07
4215 4529 6.556974 AGAGTTTGAGGAGATGAATGATCA 57.443 37.500 0.00 0.00 40.57 2.92
4216 4530 5.691305 CGAGAGTTTGAGGAGATGAATGATC 59.309 44.000 0.00 0.00 0.00 2.92
4217 4531 5.453057 CCGAGAGTTTGAGGAGATGAATGAT 60.453 44.000 0.00 0.00 0.00 2.45
4235 4549 2.892425 GTTCGCCATGGCCGAGAG 60.892 66.667 30.79 16.42 37.98 3.20
4238 4552 4.812476 CGAGTTCGCCATGGCCGA 62.812 66.667 30.79 25.83 37.98 5.54
4265 4579 5.084818 TCATGAACGTGATTGTGTAGGAT 57.915 39.130 0.00 0.00 0.00 3.24
4289 4603 1.588674 TTGTGGGACGTGATGACAAC 58.411 50.000 0.00 0.00 0.00 3.32
4290 4604 2.150390 CATTGTGGGACGTGATGACAA 58.850 47.619 0.00 0.00 0.00 3.18
4314 4635 3.209410 GTTTGAGGACTATGGGATGCAG 58.791 50.000 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.