Multiple sequence alignment - TraesCS7A01G255600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G255600 chr7A 100.000 4049 0 0 1 4049 243650800 243646752 0.000000e+00 7478.0
1 TraesCS7A01G255600 chr7B 88.905 1370 75 37 2303 3648 202161700 202160384 0.000000e+00 1616.0
2 TraesCS7A01G255600 chr7B 89.728 993 48 19 825 1767 202163631 202162643 0.000000e+00 1219.0
3 TraesCS7A01G255600 chr7B 81.585 467 38 15 372 832 202164079 202163655 3.880000e-90 342.0
4 TraesCS7A01G255600 chr7B 80.260 461 44 19 1847 2278 202162407 202161965 1.830000e-78 303.0
5 TraesCS7A01G255600 chr7B 85.211 284 18 6 3781 4049 202151972 202151698 1.850000e-68 270.0
6 TraesCS7A01G255600 chr7B 89.262 149 6 5 3648 3795 202160342 202160203 1.160000e-40 178.0
7 TraesCS7A01G255600 chr7B 90.667 75 4 3 1776 1848 202162593 202162520 3.330000e-16 97.1
8 TraesCS7A01G255600 chr7D 90.097 1242 57 26 507 1704 230817823 230816604 0.000000e+00 1552.0
9 TraesCS7A01G255600 chr7D 89.600 875 48 20 1776 2617 230816469 230815605 0.000000e+00 1072.0
10 TraesCS7A01G255600 chr7D 92.105 684 29 8 3370 4049 230814946 230814284 0.000000e+00 941.0
11 TraesCS7A01G255600 chr7D 93.592 593 19 7 2734 3324 230815523 230814948 0.000000e+00 867.0
12 TraesCS7A01G255600 chr7D 94.681 94 1 1 3956 4049 230664835 230664746 4.220000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G255600 chr7A 243646752 243650800 4048 True 7478.00 7478 100.0000 1 4049 1 chr7A.!!$R1 4048
1 TraesCS7A01G255600 chr7B 202160203 202164079 3876 True 625.85 1616 86.7345 372 3795 6 chr7B.!!$R2 3423
2 TraesCS7A01G255600 chr7D 230814284 230817823 3539 True 1108.00 1552 91.3485 507 4049 4 chr7D.!!$R2 3542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
613 614 0.036388 CACGTCCAATGTAGGCAGGT 60.036 55.0 0.00 0.0 0.0 4.00 F
916 983 0.322906 CAGGCCTTCTCTTTCCCCAC 60.323 60.0 0.00 0.0 0.0 4.61 F
1637 1714 0.537188 AATGTGAGCACTCTACCCCG 59.463 55.0 1.99 0.0 0.0 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1773 1872 0.407528 TCCCCATTACTTTGCCAGCA 59.592 50.0 0.00 0.0 0.00 4.41 R
2035 2314 0.466555 TCAACTCAAACCAACCGGGG 60.467 55.0 6.32 0.0 42.91 5.73 R
3456 4020 0.106769 TGCTTCTGCTTCACCAACCA 60.107 50.0 0.00 0.0 40.48 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.985538 AGGAATATGTGTGACAACCTTGT 58.014 39.130 0.00 0.00 45.65 3.16
23 24 6.121776 AGGAATATGTGTGACAACCTTGTA 57.878 37.500 0.00 0.00 42.43 2.41
24 25 6.539173 AGGAATATGTGTGACAACCTTGTAA 58.461 36.000 0.00 0.00 42.43 2.41
25 26 6.655003 AGGAATATGTGTGACAACCTTGTAAG 59.345 38.462 0.00 0.00 42.43 2.34
26 27 6.653320 GGAATATGTGTGACAACCTTGTAAGA 59.347 38.462 0.00 0.00 42.43 2.10
27 28 7.148407 GGAATATGTGTGACAACCTTGTAAGAG 60.148 40.741 0.00 0.00 42.43 2.85
28 29 4.481368 TGTGTGACAACCTTGTAAGAGT 57.519 40.909 0.00 0.00 42.43 3.24
29 30 4.839121 TGTGTGACAACCTTGTAAGAGTT 58.161 39.130 0.00 0.00 42.43 3.01
30 31 4.634004 TGTGTGACAACCTTGTAAGAGTTG 59.366 41.667 17.02 17.02 42.43 3.16
31 32 4.873827 GTGTGACAACCTTGTAAGAGTTGA 59.126 41.667 21.73 7.53 42.43 3.18
32 33 5.006746 GTGTGACAACCTTGTAAGAGTTGAG 59.993 44.000 21.73 7.08 42.43 3.02
33 34 4.511826 GTGACAACCTTGTAAGAGTTGAGG 59.488 45.833 21.73 0.00 42.43 3.86
34 35 4.163458 TGACAACCTTGTAAGAGTTGAGGT 59.837 41.667 21.73 8.75 42.43 3.85
35 36 5.364446 TGACAACCTTGTAAGAGTTGAGGTA 59.636 40.000 21.73 9.85 42.43 3.08
36 37 5.855045 ACAACCTTGTAAGAGTTGAGGTAG 58.145 41.667 21.73 5.69 39.71 3.18
37 38 5.221661 ACAACCTTGTAAGAGTTGAGGTAGG 60.222 44.000 21.73 0.00 39.71 3.18
38 39 4.748701 ACCTTGTAAGAGTTGAGGTAGGA 58.251 43.478 0.00 0.00 38.88 2.94
39 40 5.152934 ACCTTGTAAGAGTTGAGGTAGGAA 58.847 41.667 0.00 0.00 38.88 3.36
40 41 5.246429 ACCTTGTAAGAGTTGAGGTAGGAAG 59.754 44.000 0.00 0.00 38.88 3.46
41 42 5.246429 CCTTGTAAGAGTTGAGGTAGGAAGT 59.754 44.000 0.00 0.00 0.00 3.01
42 43 6.436532 CCTTGTAAGAGTTGAGGTAGGAAGTA 59.563 42.308 0.00 0.00 0.00 2.24
43 44 7.039223 CCTTGTAAGAGTTGAGGTAGGAAGTAA 60.039 40.741 0.00 0.00 0.00 2.24
44 45 8.431910 TTGTAAGAGTTGAGGTAGGAAGTAAT 57.568 34.615 0.00 0.00 0.00 1.89
45 46 9.537852 TTGTAAGAGTTGAGGTAGGAAGTAATA 57.462 33.333 0.00 0.00 0.00 0.98
46 47 9.710818 TGTAAGAGTTGAGGTAGGAAGTAATAT 57.289 33.333 0.00 0.00 0.00 1.28
73 74 6.927933 ATAAATTTGCAAGTAAACGTCTGC 57.072 33.333 0.00 0.00 0.00 4.26
74 75 2.766970 TTTGCAAGTAAACGTCTGCC 57.233 45.000 0.00 0.00 0.00 4.85
75 76 0.948678 TTGCAAGTAAACGTCTGCCC 59.051 50.000 0.00 0.00 0.00 5.36
76 77 0.887387 TGCAAGTAAACGTCTGCCCC 60.887 55.000 0.00 0.00 0.00 5.80
77 78 1.583495 GCAAGTAAACGTCTGCCCCC 61.583 60.000 0.00 0.00 0.00 5.40
94 95 2.584835 CCCCCAATGTCTGTCTTTCA 57.415 50.000 0.00 0.00 0.00 2.69
95 96 2.875296 CCCCCAATGTCTGTCTTTCAA 58.125 47.619 0.00 0.00 0.00 2.69
96 97 3.230134 CCCCCAATGTCTGTCTTTCAAA 58.770 45.455 0.00 0.00 0.00 2.69
97 98 3.834231 CCCCCAATGTCTGTCTTTCAAAT 59.166 43.478 0.00 0.00 0.00 2.32
98 99 5.016173 CCCCCAATGTCTGTCTTTCAAATA 58.984 41.667 0.00 0.00 0.00 1.40
99 100 5.480073 CCCCCAATGTCTGTCTTTCAAATAA 59.520 40.000 0.00 0.00 0.00 1.40
100 101 6.014669 CCCCCAATGTCTGTCTTTCAAATAAA 60.015 38.462 0.00 0.00 0.00 1.40
101 102 7.310609 CCCCCAATGTCTGTCTTTCAAATAAAT 60.311 37.037 0.00 0.00 0.00 1.40
102 103 8.096414 CCCCAATGTCTGTCTTTCAAATAAATT 58.904 33.333 0.00 0.00 0.00 1.82
103 104 9.143631 CCCAATGTCTGTCTTTCAAATAAATTC 57.856 33.333 0.00 0.00 0.00 2.17
104 105 9.918630 CCAATGTCTGTCTTTCAAATAAATTCT 57.081 29.630 0.00 0.00 0.00 2.40
107 108 9.831737 ATGTCTGTCTTTCAAATAAATTCTTCG 57.168 29.630 0.00 0.00 0.00 3.79
108 109 7.803189 TGTCTGTCTTTCAAATAAATTCTTCGC 59.197 33.333 0.00 0.00 0.00 4.70
109 110 8.017946 GTCTGTCTTTCAAATAAATTCTTCGCT 58.982 33.333 0.00 0.00 0.00 4.93
110 111 8.567948 TCTGTCTTTCAAATAAATTCTTCGCTT 58.432 29.630 0.00 0.00 0.00 4.68
111 112 8.728088 TGTCTTTCAAATAAATTCTTCGCTTC 57.272 30.769 0.00 0.00 0.00 3.86
112 113 8.349245 TGTCTTTCAAATAAATTCTTCGCTTCA 58.651 29.630 0.00 0.00 0.00 3.02
113 114 8.844690 GTCTTTCAAATAAATTCTTCGCTTCAG 58.155 33.333 0.00 0.00 0.00 3.02
114 115 7.538678 TCTTTCAAATAAATTCTTCGCTTCAGC 59.461 33.333 0.00 0.00 37.78 4.26
124 125 2.101770 GCTTCAGCGGCATCAAGC 59.898 61.111 12.75 12.75 44.65 4.01
148 149 8.766000 GCAATATCATGCAATCATAATGGAAA 57.234 30.769 0.00 0.00 45.70 3.13
149 150 8.869897 GCAATATCATGCAATCATAATGGAAAG 58.130 33.333 0.00 0.00 45.70 2.62
155 156 9.523168 TCATGCAATCATAATGGAAAGATATCA 57.477 29.630 5.32 0.00 0.00 2.15
158 159 9.358406 TGCAATCATAATGGAAAGATATCAAGT 57.642 29.630 5.32 0.00 0.00 3.16
166 167 5.694995 TGGAAAGATATCAAGTTCCATCCC 58.305 41.667 22.21 6.53 43.54 3.85
167 168 5.193527 TGGAAAGATATCAAGTTCCATCCCA 59.806 40.000 22.21 8.36 43.54 4.37
168 169 6.129179 GGAAAGATATCAAGTTCCATCCCAA 58.871 40.000 20.02 0.00 39.51 4.12
169 170 6.607198 GGAAAGATATCAAGTTCCATCCCAAA 59.393 38.462 20.02 0.00 39.51 3.28
170 171 7.201857 GGAAAGATATCAAGTTCCATCCCAAAG 60.202 40.741 20.02 0.00 39.51 2.77
171 172 5.136105 AGATATCAAGTTCCATCCCAAAGC 58.864 41.667 5.32 0.00 0.00 3.51
172 173 1.923356 TCAAGTTCCATCCCAAAGCC 58.077 50.000 0.00 0.00 0.00 4.35
173 174 1.428912 TCAAGTTCCATCCCAAAGCCT 59.571 47.619 0.00 0.00 0.00 4.58
174 175 2.158325 TCAAGTTCCATCCCAAAGCCTT 60.158 45.455 0.00 0.00 0.00 4.35
175 176 3.075283 TCAAGTTCCATCCCAAAGCCTTA 59.925 43.478 0.00 0.00 0.00 2.69
176 177 3.825908 AGTTCCATCCCAAAGCCTTAA 57.174 42.857 0.00 0.00 0.00 1.85
177 178 3.431415 AGTTCCATCCCAAAGCCTTAAC 58.569 45.455 0.00 0.00 0.00 2.01
178 179 2.496070 GTTCCATCCCAAAGCCTTAACC 59.504 50.000 0.00 0.00 0.00 2.85
179 180 1.713647 TCCATCCCAAAGCCTTAACCA 59.286 47.619 0.00 0.00 0.00 3.67
180 181 2.314549 TCCATCCCAAAGCCTTAACCAT 59.685 45.455 0.00 0.00 0.00 3.55
181 182 2.695147 CCATCCCAAAGCCTTAACCATC 59.305 50.000 0.00 0.00 0.00 3.51
182 183 2.122783 TCCCAAAGCCTTAACCATCG 57.877 50.000 0.00 0.00 0.00 3.84
183 184 1.631388 TCCCAAAGCCTTAACCATCGA 59.369 47.619 0.00 0.00 0.00 3.59
184 185 2.040545 TCCCAAAGCCTTAACCATCGAA 59.959 45.455 0.00 0.00 0.00 3.71
185 186 2.423538 CCCAAAGCCTTAACCATCGAAG 59.576 50.000 0.00 0.00 0.00 3.79
186 187 2.159379 CCAAAGCCTTAACCATCGAAGC 60.159 50.000 0.00 0.00 0.00 3.86
187 188 2.487762 CAAAGCCTTAACCATCGAAGCA 59.512 45.455 0.00 0.00 0.00 3.91
188 189 2.029838 AGCCTTAACCATCGAAGCAG 57.970 50.000 0.00 0.00 0.00 4.24
189 190 0.378610 GCCTTAACCATCGAAGCAGC 59.621 55.000 0.00 0.00 0.00 5.25
190 191 1.017387 CCTTAACCATCGAAGCAGCC 58.983 55.000 0.00 0.00 0.00 4.85
191 192 1.678728 CCTTAACCATCGAAGCAGCCA 60.679 52.381 0.00 0.00 0.00 4.75
192 193 1.667724 CTTAACCATCGAAGCAGCCAG 59.332 52.381 0.00 0.00 0.00 4.85
193 194 0.107703 TAACCATCGAAGCAGCCAGG 60.108 55.000 0.00 0.00 0.00 4.45
194 195 1.841302 AACCATCGAAGCAGCCAGGA 61.841 55.000 0.00 0.00 0.00 3.86
195 196 1.078214 CCATCGAAGCAGCCAGGAA 60.078 57.895 0.00 0.00 0.00 3.36
196 197 0.465097 CCATCGAAGCAGCCAGGAAT 60.465 55.000 0.00 0.00 0.00 3.01
197 198 1.202687 CCATCGAAGCAGCCAGGAATA 60.203 52.381 0.00 0.00 0.00 1.75
198 199 2.564771 CATCGAAGCAGCCAGGAATAA 58.435 47.619 0.00 0.00 0.00 1.40
199 200 2.779755 TCGAAGCAGCCAGGAATAAA 57.220 45.000 0.00 0.00 0.00 1.40
200 201 2.356135 TCGAAGCAGCCAGGAATAAAC 58.644 47.619 0.00 0.00 0.00 2.01
201 202 1.401905 CGAAGCAGCCAGGAATAAACC 59.598 52.381 0.00 0.00 0.00 3.27
202 203 1.751351 GAAGCAGCCAGGAATAAACCC 59.249 52.381 0.00 0.00 0.00 4.11
203 204 0.704076 AGCAGCCAGGAATAAACCCA 59.296 50.000 0.00 0.00 0.00 4.51
204 205 1.288932 AGCAGCCAGGAATAAACCCAT 59.711 47.619 0.00 0.00 0.00 4.00
205 206 2.513738 AGCAGCCAGGAATAAACCCATA 59.486 45.455 0.00 0.00 0.00 2.74
206 207 3.140895 AGCAGCCAGGAATAAACCCATAT 59.859 43.478 0.00 0.00 0.00 1.78
207 208 3.507622 GCAGCCAGGAATAAACCCATATC 59.492 47.826 0.00 0.00 0.00 1.63
208 209 4.751028 GCAGCCAGGAATAAACCCATATCT 60.751 45.833 0.00 0.00 0.00 1.98
209 210 5.388654 CAGCCAGGAATAAACCCATATCTT 58.611 41.667 0.00 0.00 0.00 2.40
210 211 5.474876 CAGCCAGGAATAAACCCATATCTTC 59.525 44.000 0.00 0.00 0.00 2.87
211 212 5.373854 AGCCAGGAATAAACCCATATCTTCT 59.626 40.000 0.00 0.00 0.00 2.85
212 213 5.474876 GCCAGGAATAAACCCATATCTTCTG 59.525 44.000 0.00 0.00 0.00 3.02
213 214 5.474876 CCAGGAATAAACCCATATCTTCTGC 59.525 44.000 0.00 0.00 0.00 4.26
214 215 5.474876 CAGGAATAAACCCATATCTTCTGCC 59.525 44.000 0.00 0.00 0.00 4.85
215 216 5.373854 AGGAATAAACCCATATCTTCTGCCT 59.626 40.000 0.00 0.00 0.00 4.75
216 217 5.474876 GGAATAAACCCATATCTTCTGCCTG 59.525 44.000 0.00 0.00 0.00 4.85
217 218 2.355010 AACCCATATCTTCTGCCTGC 57.645 50.000 0.00 0.00 0.00 4.85
218 219 1.216064 ACCCATATCTTCTGCCTGCA 58.784 50.000 0.00 0.00 0.00 4.41
219 220 1.565759 ACCCATATCTTCTGCCTGCAA 59.434 47.619 0.00 0.00 0.00 4.08
220 221 2.025037 ACCCATATCTTCTGCCTGCAAA 60.025 45.455 0.00 0.00 0.00 3.68
221 222 3.025978 CCCATATCTTCTGCCTGCAAAA 58.974 45.455 0.00 0.00 0.00 2.44
222 223 3.640029 CCCATATCTTCTGCCTGCAAAAT 59.360 43.478 0.00 0.00 0.00 1.82
223 224 4.828939 CCCATATCTTCTGCCTGCAAAATA 59.171 41.667 0.00 0.00 0.00 1.40
224 225 5.048224 CCCATATCTTCTGCCTGCAAAATAG 60.048 44.000 0.00 0.00 0.00 1.73
225 226 5.766670 CCATATCTTCTGCCTGCAAAATAGA 59.233 40.000 0.00 0.00 0.00 1.98
226 227 6.072618 CCATATCTTCTGCCTGCAAAATAGAG 60.073 42.308 0.00 0.00 0.00 2.43
227 228 4.558226 TCTTCTGCCTGCAAAATAGAGA 57.442 40.909 0.00 0.00 0.00 3.10
228 229 4.511527 TCTTCTGCCTGCAAAATAGAGAG 58.488 43.478 0.00 0.00 0.00 3.20
229 230 4.223700 TCTTCTGCCTGCAAAATAGAGAGA 59.776 41.667 0.00 0.00 0.00 3.10
230 231 4.134379 TCTGCCTGCAAAATAGAGAGAG 57.866 45.455 0.00 0.00 0.00 3.20
231 232 3.771479 TCTGCCTGCAAAATAGAGAGAGA 59.229 43.478 0.00 0.00 0.00 3.10
232 233 4.223700 TCTGCCTGCAAAATAGAGAGAGAA 59.776 41.667 0.00 0.00 0.00 2.87
233 234 4.910195 TGCCTGCAAAATAGAGAGAGAAA 58.090 39.130 0.00 0.00 0.00 2.52
234 235 5.316167 TGCCTGCAAAATAGAGAGAGAAAA 58.684 37.500 0.00 0.00 0.00 2.29
235 236 5.182001 TGCCTGCAAAATAGAGAGAGAAAAC 59.818 40.000 0.00 0.00 0.00 2.43
236 237 5.182001 GCCTGCAAAATAGAGAGAGAAAACA 59.818 40.000 0.00 0.00 0.00 2.83
237 238 6.127786 GCCTGCAAAATAGAGAGAGAAAACAT 60.128 38.462 0.00 0.00 0.00 2.71
238 239 7.576477 GCCTGCAAAATAGAGAGAGAAAACATT 60.576 37.037 0.00 0.00 0.00 2.71
239 240 8.302438 CCTGCAAAATAGAGAGAGAAAACATTT 58.698 33.333 0.00 0.00 0.00 2.32
245 246 8.512966 AATAGAGAGAGAAAACATTTAAGGCC 57.487 34.615 0.00 0.00 0.00 5.19
246 247 5.880901 AGAGAGAGAAAACATTTAAGGCCA 58.119 37.500 5.01 0.00 0.00 5.36
247 248 6.488715 AGAGAGAGAAAACATTTAAGGCCAT 58.511 36.000 5.01 0.00 0.00 4.40
248 249 6.601217 AGAGAGAGAAAACATTTAAGGCCATC 59.399 38.462 5.01 0.00 0.00 3.51
249 250 5.355350 AGAGAGAAAACATTTAAGGCCATCG 59.645 40.000 5.01 0.00 0.00 3.84
250 251 4.105486 GAGAAAACATTTAAGGCCATCGC 58.895 43.478 5.01 0.00 0.00 4.58
251 252 3.763897 AGAAAACATTTAAGGCCATCGCT 59.236 39.130 5.01 0.00 34.44 4.93
252 253 4.220602 AGAAAACATTTAAGGCCATCGCTT 59.779 37.500 5.01 0.00 34.44 4.68
253 254 3.508744 AACATTTAAGGCCATCGCTTG 57.491 42.857 5.01 0.00 34.44 4.01
254 255 2.722094 ACATTTAAGGCCATCGCTTGA 58.278 42.857 5.01 0.00 34.44 3.02
255 256 3.088532 ACATTTAAGGCCATCGCTTGAA 58.911 40.909 5.01 0.00 34.44 2.69
256 257 3.701040 ACATTTAAGGCCATCGCTTGAAT 59.299 39.130 5.01 0.00 34.44 2.57
257 258 3.781079 TTTAAGGCCATCGCTTGAATG 57.219 42.857 5.01 0.00 34.44 2.67
258 259 2.708216 TAAGGCCATCGCTTGAATGA 57.292 45.000 5.01 0.00 34.44 2.57
259 260 1.838112 AAGGCCATCGCTTGAATGAA 58.162 45.000 5.01 0.00 34.44 2.57
260 261 2.062971 AGGCCATCGCTTGAATGAAT 57.937 45.000 5.01 0.00 34.44 2.57
261 262 3.213206 AGGCCATCGCTTGAATGAATA 57.787 42.857 5.01 0.00 34.44 1.75
262 263 3.144506 AGGCCATCGCTTGAATGAATAG 58.855 45.455 5.01 0.00 34.44 1.73
263 264 2.880890 GGCCATCGCTTGAATGAATAGT 59.119 45.455 0.00 0.00 34.44 2.12
264 265 3.304257 GGCCATCGCTTGAATGAATAGTG 60.304 47.826 0.00 0.00 34.44 2.74
265 266 3.561310 GCCATCGCTTGAATGAATAGTGA 59.439 43.478 0.00 0.00 33.44 3.41
266 267 4.319333 GCCATCGCTTGAATGAATAGTGAG 60.319 45.833 0.00 0.00 32.54 3.51
267 268 4.813161 CCATCGCTTGAATGAATAGTGAGT 59.187 41.667 0.00 0.00 32.54 3.41
268 269 5.277202 CCATCGCTTGAATGAATAGTGAGTG 60.277 44.000 0.00 0.00 32.54 3.51
269 270 4.183865 TCGCTTGAATGAATAGTGAGTGG 58.816 43.478 0.00 0.00 0.00 4.00
270 271 3.935203 CGCTTGAATGAATAGTGAGTGGT 59.065 43.478 0.00 0.00 0.00 4.16
271 272 4.393062 CGCTTGAATGAATAGTGAGTGGTT 59.607 41.667 0.00 0.00 0.00 3.67
272 273 5.580691 CGCTTGAATGAATAGTGAGTGGTTA 59.419 40.000 0.00 0.00 0.00 2.85
273 274 6.258727 CGCTTGAATGAATAGTGAGTGGTTAT 59.741 38.462 0.00 0.00 0.00 1.89
274 275 7.201644 CGCTTGAATGAATAGTGAGTGGTTATT 60.202 37.037 0.00 0.00 0.00 1.40
275 276 8.125448 GCTTGAATGAATAGTGAGTGGTTATTC 58.875 37.037 0.00 0.00 35.41 1.75
276 277 9.388506 CTTGAATGAATAGTGAGTGGTTATTCT 57.611 33.333 0.00 0.00 35.71 2.40
277 278 8.948631 TGAATGAATAGTGAGTGGTTATTCTC 57.051 34.615 0.00 0.00 35.71 2.87
278 279 8.762645 TGAATGAATAGTGAGTGGTTATTCTCT 58.237 33.333 0.00 0.00 35.71 3.10
279 280 9.606631 GAATGAATAGTGAGTGGTTATTCTCTT 57.393 33.333 5.41 0.79 35.71 2.85
280 281 9.606631 AATGAATAGTGAGTGGTTATTCTCTTC 57.393 33.333 5.41 0.00 35.71 2.87
281 282 8.134202 TGAATAGTGAGTGGTTATTCTCTTCA 57.866 34.615 5.41 0.00 35.71 3.02
282 283 8.762645 TGAATAGTGAGTGGTTATTCTCTTCAT 58.237 33.333 5.41 0.00 35.71 2.57
283 284 9.606631 GAATAGTGAGTGGTTATTCTCTTCATT 57.393 33.333 0.00 0.00 33.24 2.57
284 285 9.606631 AATAGTGAGTGGTTATTCTCTTCATTC 57.393 33.333 0.00 0.00 0.00 2.67
285 286 6.410540 AGTGAGTGGTTATTCTCTTCATTCC 58.589 40.000 0.00 0.00 0.00 3.01
286 287 6.214412 AGTGAGTGGTTATTCTCTTCATTCCT 59.786 38.462 0.00 0.00 0.00 3.36
287 288 6.881602 GTGAGTGGTTATTCTCTTCATTCCTT 59.118 38.462 0.00 0.00 0.00 3.36
288 289 8.041323 GTGAGTGGTTATTCTCTTCATTCCTTA 58.959 37.037 0.00 0.00 0.00 2.69
289 290 8.772250 TGAGTGGTTATTCTCTTCATTCCTTAT 58.228 33.333 0.00 0.00 0.00 1.73
290 291 8.970859 AGTGGTTATTCTCTTCATTCCTTATG 57.029 34.615 0.00 0.00 35.45 1.90
291 292 8.772250 AGTGGTTATTCTCTTCATTCCTTATGA 58.228 33.333 0.00 0.00 41.50 2.15
293 294 9.396022 TGGTTATTCTCTTCATTCCTTATGAAC 57.604 33.333 0.00 0.00 45.91 3.18
294 295 9.396022 GGTTATTCTCTTCATTCCTTATGAACA 57.604 33.333 0.00 0.00 45.91 3.18
297 298 7.912056 TTCTCTTCATTCCTTATGAACACTG 57.088 36.000 0.00 0.00 45.91 3.66
298 299 5.877012 TCTCTTCATTCCTTATGAACACTGC 59.123 40.000 0.00 0.00 45.91 4.40
299 300 5.559770 TCTTCATTCCTTATGAACACTGCA 58.440 37.500 0.00 0.00 45.91 4.41
300 301 6.003326 TCTTCATTCCTTATGAACACTGCAA 58.997 36.000 0.00 0.00 45.91 4.08
301 302 6.489700 TCTTCATTCCTTATGAACACTGCAAA 59.510 34.615 0.00 0.00 45.91 3.68
302 303 6.258230 TCATTCCTTATGAACACTGCAAAG 57.742 37.500 0.00 0.00 40.29 2.77
303 304 5.183713 TCATTCCTTATGAACACTGCAAAGG 59.816 40.000 3.57 3.57 40.29 3.11
304 305 4.365514 TCCTTATGAACACTGCAAAGGA 57.634 40.909 7.93 7.93 40.03 3.36
305 306 4.724399 TCCTTATGAACACTGCAAAGGAA 58.276 39.130 9.31 0.00 39.52 3.36
306 307 4.761739 TCCTTATGAACACTGCAAAGGAAG 59.238 41.667 9.31 0.00 39.52 3.46
307 308 4.479619 CTTATGAACACTGCAAAGGAAGC 58.520 43.478 0.00 0.00 0.00 3.86
308 309 2.057137 TGAACACTGCAAAGGAAGCT 57.943 45.000 0.00 0.00 0.00 3.74
309 310 2.378038 TGAACACTGCAAAGGAAGCTT 58.622 42.857 0.00 0.00 0.00 3.74
310 311 2.358898 TGAACACTGCAAAGGAAGCTTC 59.641 45.455 18.54 18.54 0.00 3.86
311 312 0.947244 ACACTGCAAAGGAAGCTTCG 59.053 50.000 19.91 7.50 0.00 3.79
312 313 0.947244 CACTGCAAAGGAAGCTTCGT 59.053 50.000 19.91 17.84 0.00 3.85
313 314 1.334869 CACTGCAAAGGAAGCTTCGTT 59.665 47.619 24.83 24.83 36.91 3.85
314 315 2.024414 ACTGCAAAGGAAGCTTCGTTT 58.976 42.857 31.41 31.41 43.58 3.60
315 316 2.033424 ACTGCAAAGGAAGCTTCGTTTC 59.967 45.455 33.23 27.31 41.64 2.78
316 317 1.336755 TGCAAAGGAAGCTTCGTTTCC 59.663 47.619 33.23 28.06 41.64 3.13
317 318 1.335964 GCAAAGGAAGCTTCGTTTCCC 60.336 52.381 33.23 25.17 42.61 3.97
318 319 1.953686 CAAAGGAAGCTTCGTTTCCCA 59.046 47.619 33.23 0.00 42.61 4.37
319 320 1.605753 AAGGAAGCTTCGTTTCCCAC 58.394 50.000 24.83 7.64 42.61 4.61
320 321 0.250770 AGGAAGCTTCGTTTCCCACC 60.251 55.000 19.91 3.67 42.61 4.61
321 322 0.536460 GGAAGCTTCGTTTCCCACCA 60.536 55.000 19.91 0.00 37.02 4.17
322 323 0.591659 GAAGCTTCGTTTCCCACCAC 59.408 55.000 11.40 0.00 0.00 4.16
323 324 0.822121 AAGCTTCGTTTCCCACCACC 60.822 55.000 0.00 0.00 0.00 4.61
324 325 2.613506 GCTTCGTTTCCCACCACCG 61.614 63.158 0.00 0.00 0.00 4.94
325 326 2.592287 TTCGTTTCCCACCACCGC 60.592 61.111 0.00 0.00 0.00 5.68
326 327 3.402095 TTCGTTTCCCACCACCGCA 62.402 57.895 0.00 0.00 0.00 5.69
327 328 3.353836 CGTTTCCCACCACCGCAG 61.354 66.667 0.00 0.00 0.00 5.18
340 341 2.715624 CGCAGGATTAAAGGCCGC 59.284 61.111 0.00 0.00 0.00 6.53
341 342 2.112198 CGCAGGATTAAAGGCCGCA 61.112 57.895 0.00 0.00 0.00 5.69
342 343 1.447317 CGCAGGATTAAAGGCCGCAT 61.447 55.000 0.00 0.00 0.00 4.73
343 344 0.312102 GCAGGATTAAAGGCCGCATC 59.688 55.000 0.00 0.00 0.00 3.91
344 345 1.679139 CAGGATTAAAGGCCGCATCA 58.321 50.000 0.00 0.00 0.00 3.07
345 346 2.023673 CAGGATTAAAGGCCGCATCAA 58.976 47.619 0.00 0.00 0.00 2.57
346 347 2.024414 AGGATTAAAGGCCGCATCAAC 58.976 47.619 0.00 0.00 0.00 3.18
347 348 1.748493 GGATTAAAGGCCGCATCAACA 59.252 47.619 0.00 0.00 0.00 3.33
348 349 2.362077 GGATTAAAGGCCGCATCAACAT 59.638 45.455 0.00 0.00 0.00 2.71
349 350 3.568007 GGATTAAAGGCCGCATCAACATA 59.432 43.478 0.00 0.00 0.00 2.29
350 351 4.037446 GGATTAAAGGCCGCATCAACATAA 59.963 41.667 0.00 0.00 0.00 1.90
351 352 4.630894 TTAAAGGCCGCATCAACATAAG 57.369 40.909 0.00 0.00 0.00 1.73
352 353 0.740737 AAGGCCGCATCAACATAAGC 59.259 50.000 0.00 0.00 0.00 3.09
353 354 1.103398 AGGCCGCATCAACATAAGCC 61.103 55.000 0.00 0.00 39.25 4.35
354 355 1.383456 GGCCGCATCAACATAAGCCA 61.383 55.000 0.00 0.00 38.79 4.75
355 356 0.455410 GCCGCATCAACATAAGCCAA 59.545 50.000 0.00 0.00 0.00 4.52
356 357 1.534595 GCCGCATCAACATAAGCCAAG 60.535 52.381 0.00 0.00 0.00 3.61
357 358 2.016318 CCGCATCAACATAAGCCAAGA 58.984 47.619 0.00 0.00 0.00 3.02
358 359 2.423185 CCGCATCAACATAAGCCAAGAA 59.577 45.455 0.00 0.00 0.00 2.52
359 360 3.488047 CCGCATCAACATAAGCCAAGAAG 60.488 47.826 0.00 0.00 0.00 2.85
360 361 3.442100 GCATCAACATAAGCCAAGAAGC 58.558 45.455 0.00 0.00 0.00 3.86
361 362 3.119388 GCATCAACATAAGCCAAGAAGCA 60.119 43.478 0.00 0.00 34.23 3.91
362 363 4.441079 GCATCAACATAAGCCAAGAAGCAT 60.441 41.667 0.00 0.00 34.23 3.79
363 364 4.707030 TCAACATAAGCCAAGAAGCATG 57.293 40.909 0.00 0.00 34.23 4.06
364 365 4.081406 TCAACATAAGCCAAGAAGCATGT 58.919 39.130 0.00 0.00 32.48 3.21
365 366 5.252547 TCAACATAAGCCAAGAAGCATGTA 58.747 37.500 0.00 0.00 31.32 2.29
366 367 5.355071 TCAACATAAGCCAAGAAGCATGTAG 59.645 40.000 0.00 0.00 31.32 2.74
367 368 5.102953 ACATAAGCCAAGAAGCATGTAGA 57.897 39.130 0.00 0.00 30.16 2.59
368 369 5.688807 ACATAAGCCAAGAAGCATGTAGAT 58.311 37.500 0.00 0.00 30.16 1.98
369 370 6.830912 ACATAAGCCAAGAAGCATGTAGATA 58.169 36.000 0.00 0.00 30.16 1.98
370 371 6.933521 ACATAAGCCAAGAAGCATGTAGATAG 59.066 38.462 0.00 0.00 30.16 2.08
377 378 7.678218 GCCAAGAAGCATGTAGATAGTTTTCTG 60.678 40.741 0.00 0.00 0.00 3.02
382 383 7.383102 AGCATGTAGATAGTTTTCTGTTTGG 57.617 36.000 0.00 0.00 0.00 3.28
411 412 8.660968 GAAAATCGTTTCTAGACTTCCAAATG 57.339 34.615 0.00 0.00 40.11 2.32
421 422 8.146053 TCTAGACTTCCAAATGTTCCATAGAA 57.854 34.615 0.00 0.00 0.00 2.10
422 423 8.260818 TCTAGACTTCCAAATGTTCCATAGAAG 58.739 37.037 0.00 0.00 36.26 2.85
426 427 7.918076 ACTTCCAAATGTTCCATAGAAGAGTA 58.082 34.615 13.83 0.00 34.69 2.59
461 462 7.021790 GCTATGTTTAACAGTTTAAGTGGAGC 58.978 38.462 3.63 0.00 0.00 4.70
479 480 1.207570 AGCTGCTGAGAGGACAAGATG 59.792 52.381 0.00 0.00 0.00 2.90
498 499 6.753913 AGATGAGCAGAGGGATACAAATTA 57.246 37.500 0.00 0.00 39.74 1.40
499 500 6.767456 AGATGAGCAGAGGGATACAAATTAG 58.233 40.000 0.00 0.00 39.74 1.73
500 501 5.957771 TGAGCAGAGGGATACAAATTAGT 57.042 39.130 0.00 0.00 39.74 2.24
501 502 6.313519 TGAGCAGAGGGATACAAATTAGTT 57.686 37.500 0.00 0.00 39.74 2.24
502 503 7.432148 TGAGCAGAGGGATACAAATTAGTTA 57.568 36.000 0.00 0.00 39.74 2.24
503 504 7.500992 TGAGCAGAGGGATACAAATTAGTTAG 58.499 38.462 0.00 0.00 39.74 2.34
504 505 7.125811 TGAGCAGAGGGATACAAATTAGTTAGT 59.874 37.037 0.00 0.00 39.74 2.24
505 506 8.548880 AGCAGAGGGATACAAATTAGTTAGTA 57.451 34.615 0.00 0.00 39.74 1.82
544 545 0.101939 CGGAGCCCGGTAGACTAAAC 59.898 60.000 0.00 0.00 44.15 2.01
545 546 0.101939 GGAGCCCGGTAGACTAAACG 59.898 60.000 0.00 1.86 0.00 3.60
558 559 0.517316 CTAAACGGAGCACTTGCCAC 59.483 55.000 0.00 0.00 43.38 5.01
575 576 1.477558 CCACCCCTGAATCTACATGGC 60.478 57.143 0.00 0.00 0.00 4.40
600 601 2.159517 GCAGGAATTTGTCATCACGTCC 60.160 50.000 0.00 0.00 0.00 4.79
607 608 5.801350 ATTTGTCATCACGTCCAATGTAG 57.199 39.130 0.00 0.00 0.00 2.74
609 610 1.933853 GTCATCACGTCCAATGTAGGC 59.066 52.381 0.00 0.00 0.00 3.93
610 611 1.552792 TCATCACGTCCAATGTAGGCA 59.447 47.619 0.00 0.00 0.00 4.75
611 612 1.935873 CATCACGTCCAATGTAGGCAG 59.064 52.381 0.00 0.00 0.00 4.85
612 613 0.249120 TCACGTCCAATGTAGGCAGG 59.751 55.000 0.00 0.00 0.00 4.85
613 614 0.036388 CACGTCCAATGTAGGCAGGT 60.036 55.000 0.00 0.00 0.00 4.00
614 615 1.206132 CACGTCCAATGTAGGCAGGTA 59.794 52.381 0.00 0.00 0.00 3.08
615 616 1.903860 ACGTCCAATGTAGGCAGGTAA 59.096 47.619 0.00 0.00 0.00 2.85
616 617 2.303600 ACGTCCAATGTAGGCAGGTAAA 59.696 45.455 0.00 0.00 0.00 2.01
635 636 6.266103 AGGTAAATATGCACCAAATCCATGAG 59.734 38.462 8.34 0.00 37.28 2.90
638 639 1.314534 TGCACCAAATCCATGAGCCG 61.315 55.000 0.00 0.00 0.00 5.52
642 643 0.378257 CCAAATCCATGAGCCGAACG 59.622 55.000 0.00 0.00 0.00 3.95
644 645 1.328680 CAAATCCATGAGCCGAACGAG 59.671 52.381 0.00 0.00 0.00 4.18
646 647 1.399714 ATCCATGAGCCGAACGAGTA 58.600 50.000 0.00 0.00 0.00 2.59
691 702 5.556690 GTACGTTACGGTTCATCATCATC 57.443 43.478 10.20 0.00 0.00 2.92
737 748 1.599797 AGAAACGGCAAGGAACGGG 60.600 57.895 0.00 0.00 0.00 5.28
771 782 5.334646 GGAACGTGTTTAGCCTTTCCTAAAG 60.335 44.000 0.00 0.00 37.81 1.85
820 844 2.731571 ATACGCGCCCACATGTCCT 61.732 57.895 5.73 0.00 0.00 3.85
905 972 2.672996 TCCAAAGCGCAGGCCTTC 60.673 61.111 11.47 0.00 41.24 3.46
906 973 2.674380 CCAAAGCGCAGGCCTTCT 60.674 61.111 11.47 0.00 41.24 2.85
907 974 2.694760 CCAAAGCGCAGGCCTTCTC 61.695 63.158 11.47 0.00 41.24 2.87
911 978 0.957888 AAGCGCAGGCCTTCTCTTTC 60.958 55.000 11.47 0.00 41.24 2.62
915 982 2.078452 CAGGCCTTCTCTTTCCCCA 58.922 57.895 0.00 0.00 0.00 4.96
916 983 0.322906 CAGGCCTTCTCTTTCCCCAC 60.323 60.000 0.00 0.00 0.00 4.61
917 984 0.772124 AGGCCTTCTCTTTCCCCACA 60.772 55.000 0.00 0.00 0.00 4.17
918 985 0.609406 GGCCTTCTCTTTCCCCACAC 60.609 60.000 0.00 0.00 0.00 3.82
932 1001 4.183858 ACACCACACCACCCACCG 62.184 66.667 0.00 0.00 0.00 4.94
961 1030 0.681887 CACCCGAACCCCCATTAACC 60.682 60.000 0.00 0.00 0.00 2.85
964 1041 1.692428 CGAACCCCCATTAACCCCA 59.308 57.895 0.00 0.00 0.00 4.96
968 1045 0.924226 ACCCCCATTAACCCCAGAGG 60.924 60.000 0.00 0.00 43.78 3.69
1029 1106 3.357079 CGGGTTCTTGCGCTGCTT 61.357 61.111 9.73 0.00 0.00 3.91
1031 1108 2.555547 GGGTTCTTGCGCTGCTTGT 61.556 57.895 9.73 0.00 0.00 3.16
1032 1109 1.081840 GGTTCTTGCGCTGCTTGTC 60.082 57.895 9.73 0.00 0.00 3.18
1491 1568 2.930019 CAGGTCTGGCAGGTGGGA 60.930 66.667 15.73 0.00 0.00 4.37
1628 1705 4.320788 CCTCAGGAAGAAAAATGTGAGCAC 60.321 45.833 0.00 0.00 31.86 4.40
1636 1713 2.789409 AAATGTGAGCACTCTACCCC 57.211 50.000 1.99 0.00 0.00 4.95
1637 1714 0.537188 AATGTGAGCACTCTACCCCG 59.463 55.000 1.99 0.00 0.00 5.73
1647 1724 3.813724 GCACTCTACCCCGGAATTTATTC 59.186 47.826 0.73 0.00 36.08 1.75
1706 1805 1.871039 CCTTCCTTTCGAACGCTTCAA 59.129 47.619 0.00 0.00 0.00 2.69
1736 1835 6.666451 GCAATCGTAACGCAAACTAAAATTGG 60.666 38.462 0.00 0.00 0.00 3.16
1742 1841 3.058501 ACGCAAACTAAAATTGGACGAGG 60.059 43.478 0.00 0.00 0.00 4.63
1754 1853 7.841282 AAATTGGACGAGGAGAGATATTCTA 57.159 36.000 0.00 0.00 35.87 2.10
1818 1961 9.476202 ACAATTTTCACCTTTTAACATAAGCTC 57.524 29.630 0.00 0.00 0.00 4.09
1906 2164 5.627780 GCAATGTTTAAACAGGAGTAAACCG 59.372 40.000 24.22 6.16 43.04 4.44
1913 2171 2.423577 ACAGGAGTAAACCGCATGAAC 58.576 47.619 0.00 0.00 34.73 3.18
1954 2233 9.941325 TGGAAATACAATCAATTTTGTATGCTT 57.059 25.926 13.67 7.56 46.80 3.91
1970 2249 1.000506 TGCTTCTAACGGACACCTCAC 59.999 52.381 0.00 0.00 0.00 3.51
2035 2314 5.557891 ATGCAAGATTTCAACTCTAGTGC 57.442 39.130 0.00 0.00 30.57 4.40
2083 2362 5.659440 TCTGAACACACATCAGCTGTATA 57.341 39.130 14.67 0.00 43.19 1.47
2090 2369 6.418101 ACACACATCAGCTGTATAATTTCCT 58.582 36.000 14.67 0.00 35.91 3.36
2091 2370 6.540189 ACACACATCAGCTGTATAATTTCCTC 59.460 38.462 14.67 0.00 35.91 3.71
2093 2372 5.755375 CACATCAGCTGTATAATTTCCTCGT 59.245 40.000 14.67 0.00 35.91 4.18
2094 2373 6.923508 CACATCAGCTGTATAATTTCCTCGTA 59.076 38.462 14.67 0.00 35.91 3.43
2122 2409 3.620488 ACTCTGTGTGTCACATGGTTTT 58.380 40.909 9.31 0.00 43.71 2.43
2123 2410 3.378112 ACTCTGTGTGTCACATGGTTTTG 59.622 43.478 9.31 0.00 43.71 2.44
2150 2437 7.437862 TCTGTTCCATGCACTTTGAAAATTTAC 59.562 33.333 0.00 0.00 0.00 2.01
2158 2445 6.039616 GCACTTTGAAAATTTACACACTGGA 58.960 36.000 0.00 0.00 0.00 3.86
2165 2452 6.939730 TGAAAATTTACACACTGGAGCTGATA 59.060 34.615 0.00 0.00 0.00 2.15
2169 2456 6.985188 TTTACACACTGGAGCTGATATTTC 57.015 37.500 0.00 0.00 0.00 2.17
2180 2467 2.816672 GCTGATATTTCCTTGCCTAGCC 59.183 50.000 0.00 0.00 0.00 3.93
2249 2537 8.616076 GTCTAATTGTTGATAGCTACATTTGCT 58.384 33.333 11.23 0.00 43.79 3.91
2269 2557 3.863424 GCTTGTTCATTCATGGCATTGAG 59.137 43.478 0.00 0.00 0.00 3.02
2272 2560 5.257082 TGTTCATTCATGGCATTGAGATG 57.743 39.130 0.00 0.14 36.32 2.90
2400 2932 0.914644 TGAGCTGGGGGATTCTTCTG 59.085 55.000 0.00 0.00 0.00 3.02
2411 2943 2.305009 GATTCTTCTGCCAATGGGAGG 58.695 52.381 20.71 5.85 41.64 4.30
2589 3121 1.595382 CAGGAACATCGGGATCGCC 60.595 63.158 3.90 0.00 36.13 5.54
2601 3133 1.140816 GGATCGCCGTATTTGCTCTC 58.859 55.000 0.00 0.00 0.00 3.20
2650 3182 6.229733 CACATTCCCAATTCCTCTCTCTATC 58.770 44.000 0.00 0.00 0.00 2.08
2653 3185 6.678568 TTCCCAATTCCTCTCTCTATCATC 57.321 41.667 0.00 0.00 0.00 2.92
2654 3186 5.975113 TCCCAATTCCTCTCTCTATCATCT 58.025 41.667 0.00 0.00 0.00 2.90
2655 3187 5.779260 TCCCAATTCCTCTCTCTATCATCTG 59.221 44.000 0.00 0.00 0.00 2.90
2656 3188 5.481105 CCAATTCCTCTCTCTATCATCTGC 58.519 45.833 0.00 0.00 0.00 4.26
2657 3189 5.246656 CCAATTCCTCTCTCTATCATCTGCT 59.753 44.000 0.00 0.00 0.00 4.24
2696 3244 1.318158 GCAATGCCAGTTGCCTAGCT 61.318 55.000 0.00 0.00 46.69 3.32
2698 3246 0.329261 AATGCCAGTTGCCTAGCTGA 59.671 50.000 0.00 0.00 37.32 4.26
2700 3248 2.111582 GCCAGTTGCCTAGCTGAGC 61.112 63.158 0.00 0.00 37.32 4.26
2715 3263 2.543430 GCTGAGCAGAGCTTACTAATGC 59.457 50.000 0.00 0.00 39.88 3.56
2716 3264 3.740764 GCTGAGCAGAGCTTACTAATGCT 60.741 47.826 0.00 0.00 46.45 3.79
2717 3265 3.790091 TGAGCAGAGCTTACTAATGCTG 58.210 45.455 2.25 2.15 44.78 4.41
2722 3270 4.130286 AGAGCTTACTAATGCTGTGACC 57.870 45.455 0.00 0.00 39.91 4.02
2723 3271 3.515502 AGAGCTTACTAATGCTGTGACCA 59.484 43.478 0.00 0.00 39.91 4.02
2724 3272 4.163078 AGAGCTTACTAATGCTGTGACCAT 59.837 41.667 0.00 0.00 39.91 3.55
2725 3273 4.848357 AGCTTACTAATGCTGTGACCATT 58.152 39.130 0.00 0.00 38.21 3.16
2726 3274 5.256474 AGCTTACTAATGCTGTGACCATTT 58.744 37.500 0.00 0.00 38.21 2.32
2727 3275 5.355350 AGCTTACTAATGCTGTGACCATTTC 59.645 40.000 0.00 0.00 38.21 2.17
2728 3276 5.355350 GCTTACTAATGCTGTGACCATTTCT 59.645 40.000 0.00 0.00 34.87 2.52
2729 3277 6.127897 GCTTACTAATGCTGTGACCATTTCTT 60.128 38.462 0.00 0.00 34.87 2.52
2730 3278 7.575720 GCTTACTAATGCTGTGACCATTTCTTT 60.576 37.037 0.00 0.00 34.87 2.52
2731 3279 6.259550 ACTAATGCTGTGACCATTTCTTTC 57.740 37.500 0.00 0.00 34.87 2.62
2732 3280 6.006449 ACTAATGCTGTGACCATTTCTTTCT 58.994 36.000 0.00 0.00 34.87 2.52
2738 3286 3.698539 TGTGACCATTTCTTTCTTGTGCA 59.301 39.130 0.00 0.00 0.00 4.57
2787 3335 0.392193 AGAAGGATCACAAGCTGCGG 60.392 55.000 0.00 0.00 0.00 5.69
2901 3449 2.035442 GCAGAAGTGGAAGACGGGC 61.035 63.158 0.00 0.00 0.00 6.13
3060 3608 1.265905 CCCATGTGATGCGATGTGATG 59.734 52.381 0.00 0.00 0.00 3.07
3061 3609 1.944709 CCATGTGATGCGATGTGATGT 59.055 47.619 0.00 0.00 0.00 3.06
3062 3610 2.286772 CCATGTGATGCGATGTGATGTG 60.287 50.000 0.00 0.00 0.00 3.21
3063 3611 2.383368 TGTGATGCGATGTGATGTGA 57.617 45.000 0.00 0.00 0.00 3.58
3064 3612 2.908916 TGTGATGCGATGTGATGTGAT 58.091 42.857 0.00 0.00 0.00 3.06
3102 3651 1.227943 TCTGTGGGCTGTGTTGAGC 60.228 57.895 0.00 0.00 38.34 4.26
3136 3685 1.064240 TGTGAGCATGGATTGGCAGAT 60.064 47.619 0.00 0.00 0.00 2.90
3137 3686 1.337071 GTGAGCATGGATTGGCAGATG 59.663 52.381 0.00 0.00 0.00 2.90
3138 3687 0.314302 GAGCATGGATTGGCAGATGC 59.686 55.000 12.34 12.34 41.29 3.91
3153 3705 3.866449 GCAGATGCTATGTAGGTTAGGGC 60.866 52.174 0.00 0.00 38.21 5.19
3290 3847 3.272334 GGTGATGCCGGTCGATGC 61.272 66.667 1.90 0.00 0.00 3.91
3294 3851 4.361253 ATGCCGGTCGATGCATAC 57.639 55.556 15.60 0.00 45.89 2.39
3299 3856 0.880278 CCGGTCGATGCATACTTGGG 60.880 60.000 0.00 0.00 0.00 4.12
3324 3881 1.405463 TGTTGTGCGTGCATTTTGGTA 59.595 42.857 0.00 0.00 0.00 3.25
3325 3882 1.784283 GTTGTGCGTGCATTTTGGTAC 59.216 47.619 0.00 0.00 0.00 3.34
3339 3896 4.886247 TTTGGTACGTTTTGGTCTGAAG 57.114 40.909 0.00 0.00 0.00 3.02
3342 3899 4.370917 TGGTACGTTTTGGTCTGAAGTAC 58.629 43.478 0.00 0.00 34.11 2.73
3363 3920 2.229543 CACTTGTTGTGGCATATGCTGT 59.770 45.455 26.12 10.01 42.68 4.40
3365 3922 1.908344 TGTTGTGGCATATGCTGTGT 58.092 45.000 26.12 0.00 41.70 3.72
3406 3963 5.418676 CACTTGTTTTATGGGGCCATTTAG 58.581 41.667 4.39 0.00 37.82 1.85
3417 3974 3.212377 CCATTTAGCCATGGCCTGT 57.788 52.632 33.14 17.69 43.17 4.00
3426 3983 1.002315 GCCATGGCCTGTTTTTGTGAT 59.998 47.619 27.24 0.00 34.56 3.06
3454 4018 4.636435 GGTGTCCCGGTGGTGGTG 62.636 72.222 0.00 0.00 0.00 4.17
3455 4019 4.636435 GTGTCCCGGTGGTGGTGG 62.636 72.222 0.00 0.00 0.00 4.61
3457 4021 4.636435 GTCCCGGTGGTGGTGGTG 62.636 72.222 0.00 0.00 0.00 4.17
3481 4045 0.520847 GTGAAGCAGAAGCAGAAGCC 59.479 55.000 0.00 0.00 45.49 4.35
3549 4113 1.671379 GAAAGGAGGTGACACGGGC 60.671 63.158 0.00 0.00 0.00 6.13
3626 4190 7.417612 TGCAGAGTTCTTTCACTTTTGTATTC 58.582 34.615 0.00 0.00 0.00 1.75
3668 4274 2.781923 TCTGGTGCTAGTGTACGTACA 58.218 47.619 24.10 24.10 0.00 2.90
3669 4275 2.745821 TCTGGTGCTAGTGTACGTACAG 59.254 50.000 28.02 17.50 36.78 2.74
3670 4276 2.486982 CTGGTGCTAGTGTACGTACAGT 59.513 50.000 32.33 32.33 42.20 3.55
3671 4277 3.673902 TGGTGCTAGTGTACGTACAGTA 58.326 45.455 31.35 31.35 40.19 2.74
3672 4278 4.264253 TGGTGCTAGTGTACGTACAGTAT 58.736 43.478 32.78 22.30 40.28 2.12
3673 4279 4.095334 TGGTGCTAGTGTACGTACAGTATG 59.905 45.833 32.78 26.95 40.28 2.39
3706 4312 2.443781 ACTCCGTGAGTGGGCCTA 59.556 61.111 4.53 0.00 41.76 3.93
3707 4313 1.982938 ACTCCGTGAGTGGGCCTAC 60.983 63.158 12.09 12.09 41.76 3.18
3708 4314 1.682684 CTCCGTGAGTGGGCCTACT 60.683 63.158 23.50 23.50 0.00 2.57
3709 4315 1.949847 CTCCGTGAGTGGGCCTACTG 61.950 65.000 28.45 12.34 0.00 2.74
3734 4340 1.864435 GCGGATCTGTCCATACGTGTC 60.864 57.143 0.00 0.00 45.37 3.67
3798 4404 1.911057 TCACTTGAGCCGAGAAGAGA 58.089 50.000 0.00 0.00 0.00 3.10
3801 4407 1.067213 ACTTGAGCCGAGAAGAGAAGC 60.067 52.381 0.00 0.00 0.00 3.86
3808 4414 0.798771 CGAGAAGAGAAGCGAACGGG 60.799 60.000 0.00 0.00 0.00 5.28
3864 4470 2.495669 TCAGTGCAGGTCGATTCATACA 59.504 45.455 0.00 0.00 0.00 2.29
3865 4471 3.132824 TCAGTGCAGGTCGATTCATACAT 59.867 43.478 0.00 0.00 0.00 2.29
3866 4472 4.340950 TCAGTGCAGGTCGATTCATACATA 59.659 41.667 0.00 0.00 0.00 2.29
3868 4474 3.425525 GTGCAGGTCGATTCATACATACG 59.574 47.826 0.00 0.00 0.00 3.06
3869 4475 2.987149 GCAGGTCGATTCATACATACGG 59.013 50.000 0.00 0.00 0.00 4.02
3870 4476 3.305131 GCAGGTCGATTCATACATACGGA 60.305 47.826 0.00 0.00 0.00 4.69
3871 4477 4.227538 CAGGTCGATTCATACATACGGAC 58.772 47.826 0.00 0.00 0.00 4.79
3872 4478 4.023107 CAGGTCGATTCATACATACGGACT 60.023 45.833 0.00 0.00 0.00 3.85
3875 4481 5.401674 GGTCGATTCATACATACGGACTTTC 59.598 44.000 0.00 0.00 0.00 2.62
3889 4495 4.099120 CGGACTTTCTCGTGACAGAATAG 58.901 47.826 7.59 1.46 32.32 1.73
3909 4515 4.823276 TGTGGCAACCGCAAAAAG 57.177 50.000 0.00 0.00 41.39 2.27
4009 4617 8.529911 CATCGAGACATACATTGATTGATATCG 58.470 37.037 0.00 0.00 33.23 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.985538 ACAAGGTTGTCACACATATTCCT 58.014 39.130 0.00 0.00 36.50 3.36
1 2 6.653320 TCTTACAAGGTTGTCACACATATTCC 59.347 38.462 0.00 0.00 42.35 3.01
2 3 7.387948 ACTCTTACAAGGTTGTCACACATATTC 59.612 37.037 0.00 0.00 42.35 1.75
3 4 7.224297 ACTCTTACAAGGTTGTCACACATATT 58.776 34.615 0.00 0.00 42.35 1.28
4 5 6.769512 ACTCTTACAAGGTTGTCACACATAT 58.230 36.000 0.00 0.00 42.35 1.78
5 6 6.169557 ACTCTTACAAGGTTGTCACACATA 57.830 37.500 0.00 0.00 42.35 2.29
6 7 5.036117 ACTCTTACAAGGTTGTCACACAT 57.964 39.130 0.00 0.00 42.35 3.21
7 8 4.481368 ACTCTTACAAGGTTGTCACACA 57.519 40.909 0.00 0.00 42.35 3.72
8 9 4.873827 TCAACTCTTACAAGGTTGTCACAC 59.126 41.667 16.20 0.00 42.35 3.82
9 10 5.092554 TCAACTCTTACAAGGTTGTCACA 57.907 39.130 16.20 0.00 42.35 3.58
10 11 4.511826 CCTCAACTCTTACAAGGTTGTCAC 59.488 45.833 16.20 0.00 42.35 3.67
11 12 4.163458 ACCTCAACTCTTACAAGGTTGTCA 59.837 41.667 16.20 0.00 42.35 3.58
12 13 4.704965 ACCTCAACTCTTACAAGGTTGTC 58.295 43.478 16.20 0.00 42.35 3.18
13 14 4.772886 ACCTCAACTCTTACAAGGTTGT 57.227 40.909 16.20 0.24 44.86 3.32
14 15 5.011738 TCCTACCTCAACTCTTACAAGGTTG 59.988 44.000 13.02 13.02 40.69 3.77
15 16 5.152934 TCCTACCTCAACTCTTACAAGGTT 58.847 41.667 0.00 0.00 40.69 3.50
16 17 4.748701 TCCTACCTCAACTCTTACAAGGT 58.251 43.478 0.00 0.00 42.78 3.50
17 18 5.246429 ACTTCCTACCTCAACTCTTACAAGG 59.754 44.000 0.00 0.00 0.00 3.61
18 19 6.347859 ACTTCCTACCTCAACTCTTACAAG 57.652 41.667 0.00 0.00 0.00 3.16
19 20 7.844493 TTACTTCCTACCTCAACTCTTACAA 57.156 36.000 0.00 0.00 0.00 2.41
20 21 9.710818 ATATTACTTCCTACCTCAACTCTTACA 57.289 33.333 0.00 0.00 0.00 2.41
47 48 8.907685 GCAGACGTTTACTTGCAAATTTATTTA 58.092 29.630 0.00 0.00 0.00 1.40
48 49 7.095816 GGCAGACGTTTACTTGCAAATTTATTT 60.096 33.333 0.00 0.00 0.00 1.40
49 50 6.364976 GGCAGACGTTTACTTGCAAATTTATT 59.635 34.615 0.00 0.00 0.00 1.40
50 51 5.861787 GGCAGACGTTTACTTGCAAATTTAT 59.138 36.000 0.00 0.00 0.00 1.40
51 52 5.216648 GGCAGACGTTTACTTGCAAATTTA 58.783 37.500 0.00 0.00 0.00 1.40
52 53 4.048504 GGCAGACGTTTACTTGCAAATTT 58.951 39.130 0.00 0.00 0.00 1.82
53 54 3.552068 GGGCAGACGTTTACTTGCAAATT 60.552 43.478 0.00 0.00 0.00 1.82
54 55 2.030274 GGGCAGACGTTTACTTGCAAAT 60.030 45.455 0.00 0.00 0.00 2.32
55 56 1.335496 GGGCAGACGTTTACTTGCAAA 59.665 47.619 0.00 0.00 0.00 3.68
56 57 0.948678 GGGCAGACGTTTACTTGCAA 59.051 50.000 0.00 0.00 0.00 4.08
57 58 0.887387 GGGGCAGACGTTTACTTGCA 60.887 55.000 0.00 0.00 0.00 4.08
58 59 1.583495 GGGGGCAGACGTTTACTTGC 61.583 60.000 0.00 0.00 0.00 4.01
59 60 2.551644 GGGGGCAGACGTTTACTTG 58.448 57.895 0.00 0.00 0.00 3.16
75 76 2.584835 TGAAAGACAGACATTGGGGG 57.415 50.000 0.00 0.00 0.00 5.40
76 77 6.588719 TTATTTGAAAGACAGACATTGGGG 57.411 37.500 0.00 0.00 0.00 4.96
77 78 9.143631 GAATTTATTTGAAAGACAGACATTGGG 57.856 33.333 0.00 0.00 0.00 4.12
78 79 9.918630 AGAATTTATTTGAAAGACAGACATTGG 57.081 29.630 0.00 0.00 0.00 3.16
81 82 9.831737 CGAAGAATTTATTTGAAAGACAGACAT 57.168 29.630 0.00 0.00 0.00 3.06
82 83 7.803189 GCGAAGAATTTATTTGAAAGACAGACA 59.197 33.333 0.00 0.00 0.00 3.41
83 84 8.017946 AGCGAAGAATTTATTTGAAAGACAGAC 58.982 33.333 0.00 0.00 0.00 3.51
84 85 8.099364 AGCGAAGAATTTATTTGAAAGACAGA 57.901 30.769 0.00 0.00 0.00 3.41
85 86 8.733857 AAGCGAAGAATTTATTTGAAAGACAG 57.266 30.769 0.00 0.00 0.00 3.51
86 87 8.349245 TGAAGCGAAGAATTTATTTGAAAGACA 58.651 29.630 0.00 0.00 0.00 3.41
87 88 8.728088 TGAAGCGAAGAATTTATTTGAAAGAC 57.272 30.769 0.00 0.00 0.00 3.01
88 89 7.538678 GCTGAAGCGAAGAATTTATTTGAAAGA 59.461 33.333 0.00 0.00 0.00 2.52
89 90 7.660959 GCTGAAGCGAAGAATTTATTTGAAAG 58.339 34.615 0.00 0.00 0.00 2.62
90 91 7.566858 GCTGAAGCGAAGAATTTATTTGAAA 57.433 32.000 0.00 0.00 0.00 2.69
107 108 2.101770 GCTTGATGCCGCTGAAGC 59.898 61.111 6.02 6.02 34.50 3.86
108 109 0.454600 ATTGCTTGATGCCGCTGAAG 59.545 50.000 0.00 0.00 42.00 3.02
109 110 1.748950 TATTGCTTGATGCCGCTGAA 58.251 45.000 0.00 0.00 42.00 3.02
110 111 1.875514 GATATTGCTTGATGCCGCTGA 59.124 47.619 0.00 0.00 42.00 4.26
111 112 1.605232 TGATATTGCTTGATGCCGCTG 59.395 47.619 0.00 0.00 42.00 5.18
112 113 1.971481 TGATATTGCTTGATGCCGCT 58.029 45.000 0.00 0.00 42.00 5.52
113 114 2.592194 CATGATATTGCTTGATGCCGC 58.408 47.619 0.00 0.00 42.00 6.53
114 115 2.030628 TGCATGATATTGCTTGATGCCG 60.031 45.455 0.00 0.00 43.18 5.69
115 116 3.653539 TGCATGATATTGCTTGATGCC 57.346 42.857 0.00 0.00 43.18 4.40
116 117 5.227152 TGATTGCATGATATTGCTTGATGC 58.773 37.500 0.00 0.00 43.18 3.91
117 118 8.980143 TTATGATTGCATGATATTGCTTGATG 57.020 30.769 0.00 0.00 43.18 3.07
118 119 9.586435 CATTATGATTGCATGATATTGCTTGAT 57.414 29.630 0.00 0.00 43.18 2.57
119 120 8.032451 CCATTATGATTGCATGATATTGCTTGA 58.968 33.333 0.00 0.00 43.18 3.02
120 121 8.032451 TCCATTATGATTGCATGATATTGCTTG 58.968 33.333 0.00 0.00 43.18 4.01
121 122 8.129496 TCCATTATGATTGCATGATATTGCTT 57.871 30.769 0.00 0.00 43.18 3.91
122 123 7.712204 TCCATTATGATTGCATGATATTGCT 57.288 32.000 0.00 0.00 43.18 3.91
123 124 8.766000 TTTCCATTATGATTGCATGATATTGC 57.234 30.769 0.00 0.00 43.07 3.56
129 130 9.523168 TGATATCTTTCCATTATGATTGCATGA 57.477 29.630 3.98 0.00 35.94 3.07
132 133 9.358406 ACTTGATATCTTTCCATTATGATTGCA 57.642 29.630 3.98 0.00 0.00 4.08
144 145 5.694995 TGGGATGGAACTTGATATCTTTCC 58.305 41.667 17.72 17.72 38.43 3.13
145 146 7.645058 TTTGGGATGGAACTTGATATCTTTC 57.355 36.000 3.98 4.34 0.00 2.62
146 147 6.097412 GCTTTGGGATGGAACTTGATATCTTT 59.903 38.462 3.98 0.00 0.00 2.52
147 148 5.595952 GCTTTGGGATGGAACTTGATATCTT 59.404 40.000 3.98 0.00 0.00 2.40
148 149 5.136105 GCTTTGGGATGGAACTTGATATCT 58.864 41.667 3.98 0.00 0.00 1.98
149 150 4.279420 GGCTTTGGGATGGAACTTGATATC 59.721 45.833 0.00 0.00 0.00 1.63
150 151 4.078980 AGGCTTTGGGATGGAACTTGATAT 60.079 41.667 0.00 0.00 0.00 1.63
151 152 3.269381 AGGCTTTGGGATGGAACTTGATA 59.731 43.478 0.00 0.00 0.00 2.15
152 153 2.043526 AGGCTTTGGGATGGAACTTGAT 59.956 45.455 0.00 0.00 0.00 2.57
153 154 1.428912 AGGCTTTGGGATGGAACTTGA 59.571 47.619 0.00 0.00 0.00 3.02
154 155 1.928868 AGGCTTTGGGATGGAACTTG 58.071 50.000 0.00 0.00 0.00 3.16
155 156 2.702270 AAGGCTTTGGGATGGAACTT 57.298 45.000 0.00 0.00 0.00 2.66
156 157 3.431415 GTTAAGGCTTTGGGATGGAACT 58.569 45.455 4.45 0.00 0.00 3.01
157 158 2.496070 GGTTAAGGCTTTGGGATGGAAC 59.504 50.000 4.45 0.53 0.00 3.62
158 159 2.110899 TGGTTAAGGCTTTGGGATGGAA 59.889 45.455 4.45 0.00 0.00 3.53
159 160 1.713647 TGGTTAAGGCTTTGGGATGGA 59.286 47.619 4.45 0.00 0.00 3.41
160 161 2.230130 TGGTTAAGGCTTTGGGATGG 57.770 50.000 4.45 0.00 0.00 3.51
161 162 2.358898 CGATGGTTAAGGCTTTGGGATG 59.641 50.000 4.45 0.00 0.00 3.51
162 163 2.241176 TCGATGGTTAAGGCTTTGGGAT 59.759 45.455 4.45 0.00 0.00 3.85
163 164 1.631388 TCGATGGTTAAGGCTTTGGGA 59.369 47.619 4.45 0.00 0.00 4.37
164 165 2.122783 TCGATGGTTAAGGCTTTGGG 57.877 50.000 4.45 0.00 0.00 4.12
165 166 2.159379 GCTTCGATGGTTAAGGCTTTGG 60.159 50.000 4.45 0.00 0.00 3.28
166 167 2.487762 TGCTTCGATGGTTAAGGCTTTG 59.512 45.455 4.45 0.00 0.00 2.77
167 168 2.749621 CTGCTTCGATGGTTAAGGCTTT 59.250 45.455 4.45 0.00 0.00 3.51
168 169 2.359900 CTGCTTCGATGGTTAAGGCTT 58.640 47.619 4.58 4.58 0.00 4.35
169 170 2.014068 GCTGCTTCGATGGTTAAGGCT 61.014 52.381 0.00 0.00 0.00 4.58
170 171 0.378610 GCTGCTTCGATGGTTAAGGC 59.621 55.000 0.00 0.00 0.00 4.35
171 172 1.017387 GGCTGCTTCGATGGTTAAGG 58.983 55.000 0.00 0.00 0.00 2.69
172 173 1.667724 CTGGCTGCTTCGATGGTTAAG 59.332 52.381 0.00 0.00 0.00 1.85
173 174 1.678728 CCTGGCTGCTTCGATGGTTAA 60.679 52.381 0.00 0.00 0.00 2.01
174 175 0.107703 CCTGGCTGCTTCGATGGTTA 60.108 55.000 0.00 0.00 0.00 2.85
175 176 1.377725 CCTGGCTGCTTCGATGGTT 60.378 57.895 0.00 0.00 0.00 3.67
176 177 1.841302 TTCCTGGCTGCTTCGATGGT 61.841 55.000 0.00 0.00 0.00 3.55
177 178 0.465097 ATTCCTGGCTGCTTCGATGG 60.465 55.000 0.00 0.00 0.00 3.51
178 179 2.245159 TATTCCTGGCTGCTTCGATG 57.755 50.000 0.00 0.00 0.00 3.84
179 180 2.945668 GTTTATTCCTGGCTGCTTCGAT 59.054 45.455 0.00 0.00 0.00 3.59
180 181 2.356135 GTTTATTCCTGGCTGCTTCGA 58.644 47.619 0.00 0.00 0.00 3.71
181 182 1.401905 GGTTTATTCCTGGCTGCTTCG 59.598 52.381 0.00 0.00 0.00 3.79
182 183 1.751351 GGGTTTATTCCTGGCTGCTTC 59.249 52.381 0.00 0.00 0.00 3.86
183 184 1.077005 TGGGTTTATTCCTGGCTGCTT 59.923 47.619 0.00 0.00 0.00 3.91
184 185 0.704076 TGGGTTTATTCCTGGCTGCT 59.296 50.000 0.00 0.00 0.00 4.24
185 186 1.780503 ATGGGTTTATTCCTGGCTGC 58.219 50.000 0.00 0.00 0.00 5.25
186 187 4.990526 AGATATGGGTTTATTCCTGGCTG 58.009 43.478 0.00 0.00 0.00 4.85
187 188 5.373854 AGAAGATATGGGTTTATTCCTGGCT 59.626 40.000 0.00 0.00 0.00 4.75
188 189 5.474876 CAGAAGATATGGGTTTATTCCTGGC 59.525 44.000 0.00 0.00 0.00 4.85
189 190 5.474876 GCAGAAGATATGGGTTTATTCCTGG 59.525 44.000 0.00 0.00 0.00 4.45
190 191 5.474876 GGCAGAAGATATGGGTTTATTCCTG 59.525 44.000 0.00 0.00 0.00 3.86
191 192 5.373854 AGGCAGAAGATATGGGTTTATTCCT 59.626 40.000 0.00 0.00 0.00 3.36
192 193 5.474876 CAGGCAGAAGATATGGGTTTATTCC 59.525 44.000 0.00 0.00 0.00 3.01
193 194 5.048434 GCAGGCAGAAGATATGGGTTTATTC 60.048 44.000 0.00 0.00 0.00 1.75
194 195 4.829492 GCAGGCAGAAGATATGGGTTTATT 59.171 41.667 0.00 0.00 0.00 1.40
195 196 4.141181 TGCAGGCAGAAGATATGGGTTTAT 60.141 41.667 0.00 0.00 0.00 1.40
196 197 3.201930 TGCAGGCAGAAGATATGGGTTTA 59.798 43.478 0.00 0.00 0.00 2.01
197 198 2.025037 TGCAGGCAGAAGATATGGGTTT 60.025 45.455 0.00 0.00 0.00 3.27
198 199 1.565759 TGCAGGCAGAAGATATGGGTT 59.434 47.619 0.00 0.00 0.00 4.11
199 200 1.216064 TGCAGGCAGAAGATATGGGT 58.784 50.000 0.00 0.00 0.00 4.51
200 201 2.353357 TTGCAGGCAGAAGATATGGG 57.647 50.000 0.00 0.00 0.00 4.00
201 202 4.931661 ATTTTGCAGGCAGAAGATATGG 57.068 40.909 3.61 0.00 0.00 2.74
202 203 6.709397 TCTCTATTTTGCAGGCAGAAGATATG 59.291 38.462 3.61 0.00 0.00 1.78
203 204 6.835174 TCTCTATTTTGCAGGCAGAAGATAT 58.165 36.000 3.61 0.00 0.00 1.63
204 205 6.098838 TCTCTCTATTTTGCAGGCAGAAGATA 59.901 38.462 3.61 0.00 0.00 1.98
205 206 5.104610 TCTCTCTATTTTGCAGGCAGAAGAT 60.105 40.000 3.61 0.00 0.00 2.40
206 207 4.223700 TCTCTCTATTTTGCAGGCAGAAGA 59.776 41.667 3.61 0.00 0.00 2.87
207 208 4.511527 TCTCTCTATTTTGCAGGCAGAAG 58.488 43.478 3.61 0.00 0.00 2.85
208 209 4.223700 TCTCTCTCTATTTTGCAGGCAGAA 59.776 41.667 0.00 0.00 0.00 3.02
209 210 3.771479 TCTCTCTCTATTTTGCAGGCAGA 59.229 43.478 0.00 0.00 0.00 4.26
210 211 4.134379 TCTCTCTCTATTTTGCAGGCAG 57.866 45.455 0.00 0.00 0.00 4.85
211 212 4.558226 TTCTCTCTCTATTTTGCAGGCA 57.442 40.909 0.00 0.00 0.00 4.75
212 213 5.182001 TGTTTTCTCTCTCTATTTTGCAGGC 59.818 40.000 0.00 0.00 0.00 4.85
213 214 6.808008 TGTTTTCTCTCTCTATTTTGCAGG 57.192 37.500 0.00 0.00 0.00 4.85
219 220 8.961634 GGCCTTAAATGTTTTCTCTCTCTATTT 58.038 33.333 0.00 0.00 0.00 1.40
220 221 8.109634 TGGCCTTAAATGTTTTCTCTCTCTATT 58.890 33.333 3.32 0.00 0.00 1.73
221 222 7.633789 TGGCCTTAAATGTTTTCTCTCTCTAT 58.366 34.615 3.32 0.00 0.00 1.98
222 223 7.016153 TGGCCTTAAATGTTTTCTCTCTCTA 57.984 36.000 3.32 0.00 0.00 2.43
223 224 5.880901 TGGCCTTAAATGTTTTCTCTCTCT 58.119 37.500 3.32 0.00 0.00 3.10
224 225 6.457528 CGATGGCCTTAAATGTTTTCTCTCTC 60.458 42.308 3.32 0.00 0.00 3.20
225 226 5.355350 CGATGGCCTTAAATGTTTTCTCTCT 59.645 40.000 3.32 0.00 0.00 3.10
226 227 5.573146 CGATGGCCTTAAATGTTTTCTCTC 58.427 41.667 3.32 0.00 0.00 3.20
227 228 4.142381 GCGATGGCCTTAAATGTTTTCTCT 60.142 41.667 3.32 0.00 0.00 3.10
228 229 4.105486 GCGATGGCCTTAAATGTTTTCTC 58.895 43.478 3.32 0.00 0.00 2.87
229 230 3.763897 AGCGATGGCCTTAAATGTTTTCT 59.236 39.130 3.32 0.00 41.24 2.52
230 231 4.110036 AGCGATGGCCTTAAATGTTTTC 57.890 40.909 3.32 0.00 41.24 2.29
231 232 4.021544 TCAAGCGATGGCCTTAAATGTTTT 60.022 37.500 3.32 0.00 41.24 2.43
232 233 3.509575 TCAAGCGATGGCCTTAAATGTTT 59.490 39.130 3.32 0.00 41.24 2.83
233 234 3.088532 TCAAGCGATGGCCTTAAATGTT 58.911 40.909 3.32 0.00 41.24 2.71
234 235 2.722094 TCAAGCGATGGCCTTAAATGT 58.278 42.857 3.32 0.00 41.24 2.71
235 236 3.781079 TTCAAGCGATGGCCTTAAATG 57.219 42.857 3.32 0.00 41.24 2.32
236 237 3.953612 TCATTCAAGCGATGGCCTTAAAT 59.046 39.130 3.32 0.00 41.24 1.40
237 238 3.351740 TCATTCAAGCGATGGCCTTAAA 58.648 40.909 3.32 0.00 41.24 1.52
238 239 2.997980 TCATTCAAGCGATGGCCTTAA 58.002 42.857 3.32 0.00 41.24 1.85
239 240 2.708216 TCATTCAAGCGATGGCCTTA 57.292 45.000 3.32 0.00 41.24 2.69
240 241 1.838112 TTCATTCAAGCGATGGCCTT 58.162 45.000 3.32 0.00 41.24 4.35
241 242 2.062971 ATTCATTCAAGCGATGGCCT 57.937 45.000 3.32 0.00 41.24 5.19
242 243 2.880890 ACTATTCATTCAAGCGATGGCC 59.119 45.455 0.00 0.00 41.24 5.36
243 244 3.561310 TCACTATTCATTCAAGCGATGGC 59.439 43.478 0.00 0.00 40.37 4.40
244 245 4.813161 ACTCACTATTCATTCAAGCGATGG 59.187 41.667 0.00 0.00 0.00 3.51
245 246 5.277202 CCACTCACTATTCATTCAAGCGATG 60.277 44.000 0.00 0.00 0.00 3.84
246 247 4.813161 CCACTCACTATTCATTCAAGCGAT 59.187 41.667 0.00 0.00 0.00 4.58
247 248 4.183865 CCACTCACTATTCATTCAAGCGA 58.816 43.478 0.00 0.00 0.00 4.93
248 249 3.935203 ACCACTCACTATTCATTCAAGCG 59.065 43.478 0.00 0.00 0.00 4.68
249 250 5.886960 AACCACTCACTATTCATTCAAGC 57.113 39.130 0.00 0.00 0.00 4.01
250 251 9.388506 AGAATAACCACTCACTATTCATTCAAG 57.611 33.333 0.00 0.00 35.42 3.02
251 252 9.383519 GAGAATAACCACTCACTATTCATTCAA 57.616 33.333 0.00 0.00 35.42 2.69
252 253 8.762645 AGAGAATAACCACTCACTATTCATTCA 58.237 33.333 0.00 0.00 35.42 2.57
253 254 9.606631 AAGAGAATAACCACTCACTATTCATTC 57.393 33.333 0.00 0.00 35.42 2.67
254 255 9.606631 GAAGAGAATAACCACTCACTATTCATT 57.393 33.333 0.00 0.00 35.42 2.57
255 256 8.762645 TGAAGAGAATAACCACTCACTATTCAT 58.237 33.333 0.00 0.00 35.42 2.57
256 257 8.134202 TGAAGAGAATAACCACTCACTATTCA 57.866 34.615 0.00 0.00 35.42 2.57
257 258 9.606631 AATGAAGAGAATAACCACTCACTATTC 57.393 33.333 0.00 0.00 35.83 1.75
258 259 9.606631 GAATGAAGAGAATAACCACTCACTATT 57.393 33.333 0.00 0.00 35.83 1.73
259 260 8.207545 GGAATGAAGAGAATAACCACTCACTAT 58.792 37.037 0.00 0.00 35.83 2.12
260 261 7.400339 AGGAATGAAGAGAATAACCACTCACTA 59.600 37.037 0.00 0.00 35.83 2.74
261 262 6.214412 AGGAATGAAGAGAATAACCACTCACT 59.786 38.462 0.00 0.00 35.83 3.41
262 263 6.410540 AGGAATGAAGAGAATAACCACTCAC 58.589 40.000 0.00 0.00 35.83 3.51
263 264 6.627087 AGGAATGAAGAGAATAACCACTCA 57.373 37.500 0.00 0.00 35.83 3.41
264 265 9.050601 CATAAGGAATGAAGAGAATAACCACTC 57.949 37.037 0.00 0.00 37.86 3.51
265 266 8.772250 TCATAAGGAATGAAGAGAATAACCACT 58.228 33.333 0.00 0.00 41.75 4.00
266 267 8.964476 TCATAAGGAATGAAGAGAATAACCAC 57.036 34.615 0.00 0.00 41.75 4.16
279 280 5.183713 CCTTTGCAGTGTTCATAAGGAATGA 59.816 40.000 3.87 0.00 43.03 2.57
280 281 5.183713 TCCTTTGCAGTGTTCATAAGGAATG 59.816 40.000 9.31 0.00 38.47 2.67
281 282 5.324409 TCCTTTGCAGTGTTCATAAGGAAT 58.676 37.500 9.31 0.00 38.47 3.01
282 283 4.724399 TCCTTTGCAGTGTTCATAAGGAA 58.276 39.130 9.31 0.00 38.47 3.36
283 284 4.365514 TCCTTTGCAGTGTTCATAAGGA 57.634 40.909 7.93 7.93 38.94 3.36
284 285 4.616835 GCTTCCTTTGCAGTGTTCATAAGG 60.617 45.833 3.57 3.57 34.77 2.69
285 286 4.217118 AGCTTCCTTTGCAGTGTTCATAAG 59.783 41.667 0.00 0.00 0.00 1.73
286 287 4.144297 AGCTTCCTTTGCAGTGTTCATAA 58.856 39.130 0.00 0.00 0.00 1.90
287 288 3.754965 AGCTTCCTTTGCAGTGTTCATA 58.245 40.909 0.00 0.00 0.00 2.15
288 289 2.590821 AGCTTCCTTTGCAGTGTTCAT 58.409 42.857 0.00 0.00 0.00 2.57
289 290 2.057137 AGCTTCCTTTGCAGTGTTCA 57.943 45.000 0.00 0.00 0.00 3.18
290 291 2.603173 CGAAGCTTCCTTTGCAGTGTTC 60.603 50.000 20.62 0.00 0.00 3.18
291 292 1.334869 CGAAGCTTCCTTTGCAGTGTT 59.665 47.619 20.62 0.00 0.00 3.32
292 293 0.947244 CGAAGCTTCCTTTGCAGTGT 59.053 50.000 20.62 0.00 0.00 3.55
293 294 0.947244 ACGAAGCTTCCTTTGCAGTG 59.053 50.000 20.62 5.82 36.14 3.66
294 295 1.680338 AACGAAGCTTCCTTTGCAGT 58.320 45.000 20.62 7.91 36.14 4.40
295 296 2.654987 GAAACGAAGCTTCCTTTGCAG 58.345 47.619 22.79 10.16 36.14 4.41
296 297 2.774439 GAAACGAAGCTTCCTTTGCA 57.226 45.000 22.79 0.00 36.14 4.08
303 304 0.591659 GTGGTGGGAAACGAAGCTTC 59.408 55.000 16.84 16.84 0.00 3.86
304 305 0.822121 GGTGGTGGGAAACGAAGCTT 60.822 55.000 0.00 0.00 0.00 3.74
305 306 1.228154 GGTGGTGGGAAACGAAGCT 60.228 57.895 0.00 0.00 0.00 3.74
306 307 2.613506 CGGTGGTGGGAAACGAAGC 61.614 63.158 0.00 0.00 0.00 3.86
307 308 2.613506 GCGGTGGTGGGAAACGAAG 61.614 63.158 0.00 0.00 0.00 3.79
308 309 2.592287 GCGGTGGTGGGAAACGAA 60.592 61.111 0.00 0.00 0.00 3.85
309 310 3.818121 CTGCGGTGGTGGGAAACGA 62.818 63.158 0.00 0.00 0.00 3.85
310 311 3.353836 CTGCGGTGGTGGGAAACG 61.354 66.667 0.00 0.00 0.00 3.60
311 312 2.764637 ATCCTGCGGTGGTGGGAAAC 62.765 60.000 0.00 0.00 0.00 2.78
312 313 2.075355 AATCCTGCGGTGGTGGGAAA 62.075 55.000 0.00 0.00 0.00 3.13
313 314 1.202099 TAATCCTGCGGTGGTGGGAA 61.202 55.000 0.00 0.00 0.00 3.97
314 315 1.202099 TTAATCCTGCGGTGGTGGGA 61.202 55.000 0.00 0.00 0.00 4.37
315 316 0.322997 TTTAATCCTGCGGTGGTGGG 60.323 55.000 0.00 0.00 0.00 4.61
316 317 1.094785 CTTTAATCCTGCGGTGGTGG 58.905 55.000 0.00 0.00 0.00 4.61
317 318 1.094785 CCTTTAATCCTGCGGTGGTG 58.905 55.000 0.00 0.00 0.00 4.17
318 319 0.679960 GCCTTTAATCCTGCGGTGGT 60.680 55.000 0.00 0.00 0.00 4.16
319 320 1.384222 GGCCTTTAATCCTGCGGTGG 61.384 60.000 0.00 0.00 0.00 4.61
320 321 1.714899 CGGCCTTTAATCCTGCGGTG 61.715 60.000 0.00 0.00 0.00 4.94
321 322 1.451387 CGGCCTTTAATCCTGCGGT 60.451 57.895 0.00 0.00 0.00 5.68
322 323 2.834618 GCGGCCTTTAATCCTGCGG 61.835 63.158 0.00 0.00 0.00 5.69
323 324 1.447317 ATGCGGCCTTTAATCCTGCG 61.447 55.000 0.00 0.00 0.00 5.18
324 325 0.312102 GATGCGGCCTTTAATCCTGC 59.688 55.000 0.00 0.00 0.00 4.85
325 326 1.679139 TGATGCGGCCTTTAATCCTG 58.321 50.000 0.00 0.00 0.00 3.86
326 327 2.024414 GTTGATGCGGCCTTTAATCCT 58.976 47.619 0.00 0.00 0.00 3.24
327 328 1.748493 TGTTGATGCGGCCTTTAATCC 59.252 47.619 0.00 0.00 0.00 3.01
328 329 3.715628 ATGTTGATGCGGCCTTTAATC 57.284 42.857 0.00 0.00 0.00 1.75
329 330 4.499696 GCTTATGTTGATGCGGCCTTTAAT 60.500 41.667 0.00 0.00 0.00 1.40
330 331 3.181491 GCTTATGTTGATGCGGCCTTTAA 60.181 43.478 0.00 0.00 0.00 1.52
331 332 2.357637 GCTTATGTTGATGCGGCCTTTA 59.642 45.455 0.00 0.00 0.00 1.85
332 333 1.134946 GCTTATGTTGATGCGGCCTTT 59.865 47.619 0.00 0.00 0.00 3.11
333 334 0.740737 GCTTATGTTGATGCGGCCTT 59.259 50.000 0.00 0.00 0.00 4.35
334 335 1.103398 GGCTTATGTTGATGCGGCCT 61.103 55.000 0.00 0.00 35.73 5.19
335 336 1.360192 GGCTTATGTTGATGCGGCC 59.640 57.895 0.00 0.00 0.00 6.13
336 337 0.455410 TTGGCTTATGTTGATGCGGC 59.545 50.000 0.00 0.00 0.00 6.53
337 338 2.016318 TCTTGGCTTATGTTGATGCGG 58.984 47.619 0.00 0.00 0.00 5.69
338 339 3.688272 CTTCTTGGCTTATGTTGATGCG 58.312 45.455 0.00 0.00 0.00 4.73
339 340 3.119388 TGCTTCTTGGCTTATGTTGATGC 60.119 43.478 0.00 0.00 0.00 3.91
340 341 4.707030 TGCTTCTTGGCTTATGTTGATG 57.293 40.909 0.00 0.00 0.00 3.07
341 342 4.708421 ACATGCTTCTTGGCTTATGTTGAT 59.292 37.500 0.00 0.00 28.76 2.57
342 343 4.081406 ACATGCTTCTTGGCTTATGTTGA 58.919 39.130 0.00 0.00 28.76 3.18
343 344 4.445452 ACATGCTTCTTGGCTTATGTTG 57.555 40.909 0.00 0.00 28.76 3.33
344 345 5.500234 TCTACATGCTTCTTGGCTTATGTT 58.500 37.500 0.00 0.00 33.19 2.71
345 346 5.102953 TCTACATGCTTCTTGGCTTATGT 57.897 39.130 0.00 0.00 34.65 2.29
346 347 6.933521 ACTATCTACATGCTTCTTGGCTTATG 59.066 38.462 0.00 0.00 0.00 1.90
347 348 7.072263 ACTATCTACATGCTTCTTGGCTTAT 57.928 36.000 0.00 0.00 0.00 1.73
348 349 6.485830 ACTATCTACATGCTTCTTGGCTTA 57.514 37.500 0.00 0.00 0.00 3.09
349 350 5.365021 ACTATCTACATGCTTCTTGGCTT 57.635 39.130 0.00 0.00 0.00 4.35
350 351 5.365021 AACTATCTACATGCTTCTTGGCT 57.635 39.130 0.00 0.00 0.00 4.75
351 352 6.317391 AGAAAACTATCTACATGCTTCTTGGC 59.683 38.462 0.00 0.00 0.00 4.52
352 353 7.335422 ACAGAAAACTATCTACATGCTTCTTGG 59.665 37.037 0.00 0.00 0.00 3.61
353 354 8.261492 ACAGAAAACTATCTACATGCTTCTTG 57.739 34.615 0.00 0.00 0.00 3.02
354 355 8.854614 AACAGAAAACTATCTACATGCTTCTT 57.145 30.769 0.00 0.00 0.00 2.52
355 356 8.725148 CAAACAGAAAACTATCTACATGCTTCT 58.275 33.333 0.00 0.00 0.00 2.85
356 357 7.965107 CCAAACAGAAAACTATCTACATGCTTC 59.035 37.037 0.00 0.00 0.00 3.86
357 358 7.665559 TCCAAACAGAAAACTATCTACATGCTT 59.334 33.333 0.00 0.00 0.00 3.91
358 359 7.168219 TCCAAACAGAAAACTATCTACATGCT 58.832 34.615 0.00 0.00 0.00 3.79
359 360 7.377766 TCCAAACAGAAAACTATCTACATGC 57.622 36.000 0.00 0.00 0.00 4.06
360 361 9.831737 CTTTCCAAACAGAAAACTATCTACATG 57.168 33.333 0.00 0.00 35.41 3.21
361 362 9.793259 TCTTTCCAAACAGAAAACTATCTACAT 57.207 29.630 0.00 0.00 35.41 2.29
362 363 9.621629 TTCTTTCCAAACAGAAAACTATCTACA 57.378 29.630 0.00 0.00 35.41 2.74
367 368 9.463443 CGATTTTCTTTCCAAACAGAAAACTAT 57.537 29.630 8.79 0.00 46.62 2.12
368 369 8.463607 ACGATTTTCTTTCCAAACAGAAAACTA 58.536 29.630 8.79 0.00 46.62 2.24
369 370 7.320399 ACGATTTTCTTTCCAAACAGAAAACT 58.680 30.769 8.79 1.00 46.62 2.66
370 371 7.520119 ACGATTTTCTTTCCAAACAGAAAAC 57.480 32.000 8.79 4.10 46.62 2.43
392 393 5.468746 TGGAACATTTGGAAGTCTAGAAACG 59.531 40.000 0.00 0.00 0.00 3.60
393 394 6.877611 TGGAACATTTGGAAGTCTAGAAAC 57.122 37.500 0.00 0.00 0.00 2.78
411 412 8.613482 GCCTACATTTTTACTCTTCTATGGAAC 58.387 37.037 0.00 0.00 0.00 3.62
432 433 8.448615 CCACTTAAACTGTTAAACATAGCCTAC 58.551 37.037 0.00 0.00 0.00 3.18
433 434 8.377034 TCCACTTAAACTGTTAAACATAGCCTA 58.623 33.333 0.00 0.00 0.00 3.93
440 441 5.220970 GCAGCTCCACTTAAACTGTTAAACA 60.221 40.000 0.00 0.00 0.00 2.83
447 448 2.740981 CTCAGCAGCTCCACTTAAACTG 59.259 50.000 0.00 0.00 0.00 3.16
448 449 2.634940 TCTCAGCAGCTCCACTTAAACT 59.365 45.455 0.00 0.00 0.00 2.66
449 450 2.999355 CTCTCAGCAGCTCCACTTAAAC 59.001 50.000 0.00 0.00 0.00 2.01
450 451 2.027745 CCTCTCAGCAGCTCCACTTAAA 60.028 50.000 0.00 0.00 0.00 1.52
451 452 1.552337 CCTCTCAGCAGCTCCACTTAA 59.448 52.381 0.00 0.00 0.00 1.85
452 453 1.189752 CCTCTCAGCAGCTCCACTTA 58.810 55.000 0.00 0.00 0.00 2.24
453 454 0.543883 TCCTCTCAGCAGCTCCACTT 60.544 55.000 0.00 0.00 0.00 3.16
454 455 1.078166 TCCTCTCAGCAGCTCCACT 59.922 57.895 0.00 0.00 0.00 4.00
461 462 2.739287 GCTCATCTTGTCCTCTCAGCAG 60.739 54.545 0.00 0.00 0.00 4.24
479 480 7.501844 ACTAACTAATTTGTATCCCTCTGCTC 58.498 38.462 0.00 0.00 0.00 4.26
534 535 2.666994 GCAAGTGCTCCGTTTAGTCTAC 59.333 50.000 0.00 0.00 38.21 2.59
535 536 2.353406 GGCAAGTGCTCCGTTTAGTCTA 60.353 50.000 2.85 0.00 41.70 2.59
536 537 1.608283 GGCAAGTGCTCCGTTTAGTCT 60.608 52.381 2.85 0.00 41.70 3.24
537 538 0.796927 GGCAAGTGCTCCGTTTAGTC 59.203 55.000 2.85 0.00 41.70 2.59
538 539 0.107831 TGGCAAGTGCTCCGTTTAGT 59.892 50.000 2.85 0.00 41.70 2.24
539 540 0.517316 GTGGCAAGTGCTCCGTTTAG 59.483 55.000 2.85 0.00 41.70 1.85
540 541 0.887387 GGTGGCAAGTGCTCCGTTTA 60.887 55.000 2.85 0.00 41.70 2.01
541 542 2.193536 GGTGGCAAGTGCTCCGTTT 61.194 57.895 2.85 0.00 41.70 3.60
545 546 3.971702 AGGGGTGGCAAGTGCTCC 61.972 66.667 2.85 6.40 41.70 4.70
558 559 0.250467 CGGCCATGTAGATTCAGGGG 60.250 60.000 2.24 0.00 39.33 4.79
575 576 1.811965 TGATGACAAATTCCTGCACGG 59.188 47.619 0.00 0.00 0.00 4.94
600 601 5.278463 GGTGCATATTTACCTGCCTACATTG 60.278 44.000 0.00 0.00 37.59 2.82
607 608 4.501400 GGATTTGGTGCATATTTACCTGCC 60.501 45.833 0.00 0.00 37.59 4.85
609 610 5.850557 TGGATTTGGTGCATATTTACCTG 57.149 39.130 0.00 0.00 37.84 4.00
610 611 6.135454 TCATGGATTTGGTGCATATTTACCT 58.865 36.000 0.00 0.00 36.66 3.08
611 612 6.403866 TCATGGATTTGGTGCATATTTACC 57.596 37.500 0.00 0.00 36.66 2.85
612 613 5.922544 GCTCATGGATTTGGTGCATATTTAC 59.077 40.000 0.00 0.00 36.66 2.01
613 614 5.010922 GGCTCATGGATTTGGTGCATATTTA 59.989 40.000 0.00 0.00 36.66 1.40
614 615 4.202284 GGCTCATGGATTTGGTGCATATTT 60.202 41.667 0.00 0.00 36.66 1.40
615 616 3.322828 GGCTCATGGATTTGGTGCATATT 59.677 43.478 0.00 0.00 36.66 1.28
616 617 2.895404 GGCTCATGGATTTGGTGCATAT 59.105 45.455 0.00 0.00 36.66 1.78
635 636 7.490725 TGATCTACTATACTATACTCGTTCGGC 59.509 40.741 0.00 0.00 0.00 5.54
737 748 2.089744 AACACGTTCCGTTTTTACGC 57.910 45.000 0.00 0.00 38.32 4.42
887 932 2.674380 AAGGCCTGCGCTTTGGAG 60.674 61.111 5.69 0.00 32.18 3.86
896 963 1.379176 GGGGAAAGAGAAGGCCTGC 60.379 63.158 5.69 3.13 0.00 4.85
905 972 0.537371 GGTGTGGTGTGGGGAAAGAG 60.537 60.000 0.00 0.00 0.00 2.85
906 973 1.282653 TGGTGTGGTGTGGGGAAAGA 61.283 55.000 0.00 0.00 0.00 2.52
907 974 1.106944 GTGGTGTGGTGTGGGGAAAG 61.107 60.000 0.00 0.00 0.00 2.62
911 978 4.596585 GGGTGGTGTGGTGTGGGG 62.597 72.222 0.00 0.00 0.00 4.96
915 982 4.183858 CGGTGGGTGGTGTGGTGT 62.184 66.667 0.00 0.00 0.00 4.16
916 983 4.947147 CCGGTGGGTGGTGTGGTG 62.947 72.222 0.00 0.00 0.00 4.17
934 1003 3.400054 GGTTCGGGTGGGAGGAGG 61.400 72.222 0.00 0.00 0.00 4.30
943 1012 1.693034 GGTTAATGGGGGTTCGGGT 59.307 57.895 0.00 0.00 0.00 5.28
946 1015 0.395173 CTGGGGTTAATGGGGGTTCG 60.395 60.000 0.00 0.00 0.00 3.95
961 1030 1.152139 GGGGGATCTCTCCTCTGGG 60.152 68.421 0.00 0.00 42.33 4.45
964 1041 1.539665 GACGGGGGATCTCTCCTCT 59.460 63.158 0.00 0.00 42.33 3.69
968 1045 0.825840 CAGAGGACGGGGGATCTCTC 60.826 65.000 0.00 0.00 34.71 3.20
1182 1259 3.151022 GCCACGGAGAGGGAGGAG 61.151 72.222 0.00 0.00 39.19 3.69
1628 1705 6.770785 TCAAATGAATAAATTCCGGGGTAGAG 59.229 38.462 0.00 0.00 35.97 2.43
1636 1713 8.876275 ATGTGGAATCAAATGAATAAATTCCG 57.124 30.769 7.66 0.00 45.43 4.30
1647 1724 7.774134 TGGAGACATAAATGTGGAATCAAATG 58.226 34.615 0.00 0.00 41.95 2.32
1667 1744 4.104383 AGGAAAAACTTGAGCATGGAGA 57.896 40.909 0.00 0.00 0.00 3.71
1706 1805 2.983803 GTTTGCGTTACGATTGCCAAAT 59.016 40.909 9.62 0.00 0.00 2.32
1736 1835 8.780846 TTCTGTATAGAATATCTCTCCTCGTC 57.219 38.462 0.00 0.00 37.99 4.20
1771 1870 1.832998 CCCCATTACTTTGCCAGCAAT 59.167 47.619 5.80 0.00 35.70 3.56
1773 1872 0.407528 TCCCCATTACTTTGCCAGCA 59.592 50.000 0.00 0.00 0.00 4.41
1774 1873 0.817654 GTCCCCATTACTTTGCCAGC 59.182 55.000 0.00 0.00 0.00 4.85
1825 1969 9.768662 ACTCGTAGAAAAGTTGGATACTAAAAA 57.231 29.630 0.00 0.00 32.66 1.94
1831 1975 6.388278 ACTCACTCGTAGAAAAGTTGGATAC 58.612 40.000 0.00 0.00 34.09 2.24
1833 1977 5.470047 ACTCACTCGTAGAAAAGTTGGAT 57.530 39.130 0.00 0.00 34.09 3.41
1835 1979 6.144080 CAGTTACTCACTCGTAGAAAAGTTGG 59.856 42.308 0.00 0.00 34.09 3.77
1888 2146 5.064558 TCATGCGGTTTACTCCTGTTTAAA 58.935 37.500 0.00 0.00 0.00 1.52
1906 2164 2.293122 TGTTGTTGCCACTAGTTCATGC 59.707 45.455 0.00 0.00 0.00 4.06
1913 2171 4.789012 ATTTCCATGTTGTTGCCACTAG 57.211 40.909 0.00 0.00 0.00 2.57
1937 2216 7.968405 GTCCGTTAGAAGCATACAAAATTGATT 59.032 33.333 0.00 0.00 0.00 2.57
1954 2233 2.589720 TCTTGTGAGGTGTCCGTTAGA 58.410 47.619 0.00 0.00 0.00 2.10
1970 2249 2.604462 GCAAACAGGCACAGTTTTCTTG 59.396 45.455 0.86 0.00 45.60 3.02
2019 2298 2.280628 CGGGGCACTAGAGTTGAAATC 58.719 52.381 0.00 0.00 0.00 2.17
2030 2309 1.228306 CAAACCAACCGGGGCACTA 60.228 57.895 6.32 0.00 42.91 2.74
2035 2314 0.466555 TCAACTCAAACCAACCGGGG 60.467 55.000 6.32 0.00 42.91 5.73
2083 2362 6.202954 CACAGAGTCAACTTTACGAGGAAATT 59.797 38.462 0.00 0.00 0.00 1.82
2090 2369 4.142337 TGACACACAGAGTCAACTTTACGA 60.142 41.667 0.00 0.00 42.57 3.43
2091 2370 4.026804 GTGACACACAGAGTCAACTTTACG 60.027 45.833 0.00 0.00 46.50 3.18
2093 2372 5.079689 TGTGACACACAGAGTCAACTTTA 57.920 39.130 3.56 0.00 46.50 1.85
2094 2373 3.937814 TGTGACACACAGAGTCAACTTT 58.062 40.909 3.56 0.00 46.50 2.66
2150 2437 4.148128 AGGAAATATCAGCTCCAGTGTG 57.852 45.455 0.00 0.00 0.00 3.82
2158 2445 3.497584 GGCTAGGCAAGGAAATATCAGCT 60.498 47.826 12.16 0.00 0.00 4.24
2165 2452 3.115390 TCTACTGGCTAGGCAAGGAAAT 58.885 45.455 20.64 4.53 33.11 2.17
2169 2456 3.135530 AGAAATCTACTGGCTAGGCAAGG 59.864 47.826 20.64 12.00 33.11 3.61
2180 2467 3.944015 CCAAGGCAGGAAGAAATCTACTG 59.056 47.826 9.47 9.47 35.49 2.74
2245 2533 3.965379 ATGCCATGAATGAACAAGCAA 57.035 38.095 0.00 0.00 36.95 3.91
2249 2537 5.394773 CCATCTCAATGCCATGAATGAACAA 60.395 40.000 0.00 0.00 0.00 2.83
2269 2557 8.768955 CAGTATGCTCTGTTTTATACTTCCATC 58.231 37.037 0.00 0.00 34.94 3.51
2272 2560 8.718102 TTCAGTATGCTCTGTTTTATACTTCC 57.282 34.615 0.00 0.00 34.94 3.46
2322 2852 3.652057 ACAGGGGTAAGGATGACAATG 57.348 47.619 0.00 0.00 0.00 2.82
2353 2884 1.747355 CAGAATTCCATGGGTCTGCAC 59.253 52.381 20.85 5.84 31.80 4.57
2526 3058 6.485984 CCTTGGACAGATTTCCTAGATGAATG 59.514 42.308 2.62 0.00 39.99 2.67
2589 3121 1.202222 ACGGTACCGAGAGCAAATACG 60.202 52.381 39.52 9.50 42.83 3.06
2601 3133 2.019249 TCATCTACCTGAACGGTACCG 58.981 52.381 32.22 32.22 46.73 4.02
2617 3149 4.522022 GGAATTGGGAATGTGGAGATCATC 59.478 45.833 0.00 0.00 0.00 2.92
2625 3157 3.201708 AGAGAGAGGAATTGGGAATGTGG 59.798 47.826 0.00 0.00 0.00 4.17
2655 3187 6.428799 TGCACAAAAATGCTTCAATTTTAGC 58.571 32.000 0.00 2.31 46.28 3.09
2656 3188 8.897809 CATTGCACAAAAATGCTTCAATTTTAG 58.102 29.630 0.00 0.00 46.28 1.85
2657 3189 8.783999 CATTGCACAAAAATGCTTCAATTTTA 57.216 26.923 0.00 0.00 46.28 1.52
2696 3244 3.196469 ACAGCATTAGTAAGCTCTGCTCA 59.804 43.478 5.87 0.00 39.99 4.26
2698 3246 3.196469 TCACAGCATTAGTAAGCTCTGCT 59.804 43.478 3.39 3.39 41.56 4.24
2700 3248 3.868077 GGTCACAGCATTAGTAAGCTCTG 59.132 47.826 0.00 5.86 39.50 3.35
2713 3261 3.953612 ACAAGAAAGAAATGGTCACAGCA 59.046 39.130 0.00 0.00 0.00 4.41
2714 3262 4.293415 CACAAGAAAGAAATGGTCACAGC 58.707 43.478 0.00 0.00 0.00 4.40
2715 3263 4.202040 TGCACAAGAAAGAAATGGTCACAG 60.202 41.667 0.00 0.00 0.00 3.66
2716 3264 3.698539 TGCACAAGAAAGAAATGGTCACA 59.301 39.130 0.00 0.00 0.00 3.58
2717 3265 4.305989 TGCACAAGAAAGAAATGGTCAC 57.694 40.909 0.00 0.00 0.00 3.67
2719 3267 6.913170 TCTATTGCACAAGAAAGAAATGGTC 58.087 36.000 0.00 0.00 0.00 4.02
2720 3268 6.899393 TCTATTGCACAAGAAAGAAATGGT 57.101 33.333 0.00 0.00 0.00 3.55
2721 3269 7.769220 AGATCTATTGCACAAGAAAGAAATGG 58.231 34.615 0.00 0.00 0.00 3.16
2722 3270 9.635520 AAAGATCTATTGCACAAGAAAGAAATG 57.364 29.630 0.00 0.00 0.00 2.32
2723 3271 9.635520 CAAAGATCTATTGCACAAGAAAGAAAT 57.364 29.630 0.00 0.00 0.00 2.17
2738 3286 3.624861 CAGGAACAGCGCAAAGATCTATT 59.375 43.478 11.47 0.00 0.00 1.73
2787 3335 1.340889 TGGTACACGTTCCAGTACACC 59.659 52.381 13.83 3.33 41.74 4.16
2901 3449 2.449548 GCCGATGGCGATGATGTAG 58.550 57.895 0.00 0.00 39.62 2.74
2937 3485 4.101448 ATCACCTCCAGCGCCACC 62.101 66.667 2.29 0.00 0.00 4.61
3018 3566 1.066908 AGATGGCCGTTGTTGTTGTTG 59.933 47.619 0.00 0.00 0.00 3.33
3019 3567 1.066908 CAGATGGCCGTTGTTGTTGTT 59.933 47.619 0.00 0.00 0.00 2.83
3020 3568 0.667993 CAGATGGCCGTTGTTGTTGT 59.332 50.000 0.00 0.00 0.00 3.32
3060 3608 1.087501 GGCCACCGAGAAAGAATCAC 58.912 55.000 0.00 0.00 0.00 3.06
3061 3609 3.551259 GGCCACCGAGAAAGAATCA 57.449 52.632 0.00 0.00 0.00 2.57
3080 3628 0.886490 CAACACAGCCCACAGACTCC 60.886 60.000 0.00 0.00 0.00 3.85
3083 3632 1.510480 GCTCAACACAGCCCACAGAC 61.510 60.000 0.00 0.00 32.76 3.51
3087 3636 1.227943 TCAGCTCAACACAGCCCAC 60.228 57.895 0.00 0.00 40.65 4.61
3092 3641 1.867615 GCAGCTCAGCTCAACACAG 59.132 57.895 0.00 0.00 36.40 3.66
3102 3651 1.554891 CTCACACACACGCAGCTCAG 61.555 60.000 0.00 0.00 0.00 3.35
3136 3685 1.045407 CGGCCCTAACCTACATAGCA 58.955 55.000 0.00 0.00 0.00 3.49
3137 3686 0.320697 CCGGCCCTAACCTACATAGC 59.679 60.000 0.00 0.00 0.00 2.97
3138 3687 0.974383 CCCGGCCCTAACCTACATAG 59.026 60.000 0.00 0.00 0.00 2.23
3208 3761 8.135529 GCAGTACTATACACACACATCTATCAA 58.864 37.037 0.00 0.00 0.00 2.57
3254 3807 7.123397 GCATCACCTCTCTCATTCCAGTATATA 59.877 40.741 0.00 0.00 0.00 0.86
3255 3808 6.070881 GCATCACCTCTCTCATTCCAGTATAT 60.071 42.308 0.00 0.00 0.00 0.86
3274 3829 2.511373 TGCATCGACCGGCATCAC 60.511 61.111 0.00 0.00 34.58 3.06
3290 3847 3.120338 CGCACAACAAGTACCCAAGTATG 60.120 47.826 0.00 0.00 0.00 2.39
3294 3851 1.002900 CACGCACAACAAGTACCCAAG 60.003 52.381 0.00 0.00 0.00 3.61
3299 3856 2.399396 AATGCACGCACAACAAGTAC 57.601 45.000 0.00 0.00 0.00 2.73
3324 3881 4.133013 AGTGTACTTCAGACCAAAACGT 57.867 40.909 0.00 0.00 0.00 3.99
3325 3882 4.331717 ACAAGTGTACTTCAGACCAAAACG 59.668 41.667 0.00 0.00 33.11 3.60
3406 3963 0.392336 TCACAAAAACAGGCCATGGC 59.608 50.000 29.47 29.47 41.06 4.40
3417 3974 2.355716 CCTCTCCCGGCTATCACAAAAA 60.356 50.000 0.00 0.00 0.00 1.94
3426 3983 2.043248 GGACACCTCTCCCGGCTA 60.043 66.667 0.00 0.00 0.00 3.93
3454 4018 0.954452 CTTCTGCTTCACCAACCACC 59.046 55.000 0.00 0.00 0.00 4.61
3455 4019 0.312102 GCTTCTGCTTCACCAACCAC 59.688 55.000 0.00 0.00 36.03 4.16
3456 4020 0.106769 TGCTTCTGCTTCACCAACCA 60.107 50.000 0.00 0.00 40.48 3.67
3457 4021 0.595095 CTGCTTCTGCTTCACCAACC 59.405 55.000 0.00 0.00 40.48 3.77
3458 4022 1.597742 TCTGCTTCTGCTTCACCAAC 58.402 50.000 0.00 0.00 40.48 3.77
3459 4023 2.224606 CTTCTGCTTCTGCTTCACCAA 58.775 47.619 0.00 0.00 40.48 3.67
3481 4045 5.449177 GGCAGAAACATTTTCTATCTTCCCG 60.449 44.000 0.91 0.00 0.00 5.14
3549 4113 0.319900 AGTGTACTTGACGCCTGCTG 60.320 55.000 0.00 0.00 39.57 4.41
3626 4190 0.968405 CAACCAAATGTCCTGTGGGG 59.032 55.000 0.00 0.00 36.69 4.96
3668 4274 7.014038 CGGAGTGGGAAAGTTATAGTACATACT 59.986 40.741 0.00 0.00 40.24 2.12
3669 4275 7.144000 CGGAGTGGGAAAGTTATAGTACATAC 58.856 42.308 0.00 0.00 0.00 2.39
3670 4276 6.835488 ACGGAGTGGGAAAGTTATAGTACATA 59.165 38.462 0.00 0.00 42.51 2.29
3671 4277 5.659971 ACGGAGTGGGAAAGTTATAGTACAT 59.340 40.000 0.00 0.00 42.51 2.29
3672 4278 5.018809 ACGGAGTGGGAAAGTTATAGTACA 58.981 41.667 0.00 0.00 42.51 2.90
3673 4279 5.588958 ACGGAGTGGGAAAGTTATAGTAC 57.411 43.478 0.00 0.00 42.51 2.73
3706 4312 2.607750 ACAGATCCGCCACCCAGT 60.608 61.111 0.00 0.00 0.00 4.00
3707 4313 2.187946 GACAGATCCGCCACCCAG 59.812 66.667 0.00 0.00 0.00 4.45
3708 4314 3.399181 GGACAGATCCGCCACCCA 61.399 66.667 0.00 0.00 34.48 4.51
3734 4340 2.373540 TCTTGTTCATTCGTACCGGG 57.626 50.000 6.32 0.00 0.00 5.73
3798 4404 0.036306 AATTCCTCACCCGTTCGCTT 59.964 50.000 0.00 0.00 0.00 4.68
3801 4407 0.036765 TCCAATTCCTCACCCGTTCG 60.037 55.000 0.00 0.00 0.00 3.95
3808 4414 0.462759 CGCCCTCTCCAATTCCTCAC 60.463 60.000 0.00 0.00 0.00 3.51
3864 4470 3.079578 TCTGTCACGAGAAAGTCCGTAT 58.920 45.455 0.00 0.00 37.23 3.06
3865 4471 2.497138 TCTGTCACGAGAAAGTCCGTA 58.503 47.619 0.00 0.00 37.23 4.02
3866 4472 1.315690 TCTGTCACGAGAAAGTCCGT 58.684 50.000 0.00 0.00 39.88 4.69
3868 4474 3.860536 GCTATTCTGTCACGAGAAAGTCC 59.139 47.826 0.00 0.00 35.60 3.85
3869 4475 4.739195 AGCTATTCTGTCACGAGAAAGTC 58.261 43.478 0.00 0.00 35.60 3.01
3870 4476 4.792521 AGCTATTCTGTCACGAGAAAGT 57.207 40.909 0.00 0.00 35.60 2.66
3871 4477 4.926238 ACAAGCTATTCTGTCACGAGAAAG 59.074 41.667 0.00 0.00 35.60 2.62
3872 4478 4.686091 CACAAGCTATTCTGTCACGAGAAA 59.314 41.667 0.00 0.00 35.60 2.52
3875 4481 2.926200 CCACAAGCTATTCTGTCACGAG 59.074 50.000 0.00 0.00 0.00 4.18
3889 4495 1.086634 TTTTTGCGGTTGCCACAAGC 61.087 50.000 0.00 0.00 41.78 4.01
3909 4515 2.093658 TCCATCTTGGCTTTCCGTACTC 60.094 50.000 0.00 0.00 37.47 2.59
3990 4598 6.233434 ACCAGCGATATCAATCAATGTATGT 58.767 36.000 3.12 0.00 31.93 2.29
3991 4599 6.732531 ACCAGCGATATCAATCAATGTATG 57.267 37.500 3.12 0.00 31.93 2.39
3992 4600 7.550551 CCTAACCAGCGATATCAATCAATGTAT 59.449 37.037 3.12 0.00 31.93 2.29
3993 4601 6.873605 CCTAACCAGCGATATCAATCAATGTA 59.126 38.462 3.12 0.00 31.93 2.29
4009 4617 1.746991 GTCAGCCAGCCTAACCAGC 60.747 63.158 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.