Multiple sequence alignment - TraesCS7A01G249500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G249500 chr7A 100.000 2821 0 0 1 2821 232344908 232347728 0.000000e+00 5210.0
1 TraesCS7A01G249500 chr7A 98.779 1966 14 4 1 1957 608237687 608235723 0.000000e+00 3489.0
2 TraesCS7A01G249500 chr7A 92.876 744 28 10 1 722 511550544 511549804 0.000000e+00 1057.0
3 TraesCS7A01G249500 chr7A 97.115 520 13 2 1434 1953 661879526 661880043 0.000000e+00 876.0
4 TraesCS7A01G249500 chr7A 87.361 451 43 8 2168 2608 210689442 210688996 3.240000e-139 505.0
5 TraesCS7A01G249500 chr7A 78.975 761 109 39 7 735 9481737 9480996 3.290000e-129 472.0
6 TraesCS7A01G249500 chr7A 96.098 205 8 0 2617 2821 232347233 232347437 4.500000e-88 335.0
7 TraesCS7A01G249500 chr3A 99.029 1957 10 3 1 1949 747647737 747649692 0.000000e+00 3500.0
8 TraesCS7A01G249500 chr3A 98.340 1867 22 3 93 1951 337496905 337498770 0.000000e+00 3267.0
9 TraesCS7A01G249500 chr3A 89.356 714 50 19 1245 1948 265372477 265373174 0.000000e+00 874.0
10 TraesCS7A01G249500 chr1B 98.520 1960 13 4 1 1952 4986650 4984699 0.000000e+00 3445.0
11 TraesCS7A01G249500 chr1B 89.697 1980 128 24 1 1950 65108502 65106569 0.000000e+00 2457.0
12 TraesCS7A01G249500 chr3B 95.962 1040 39 3 921 1959 35475123 35474086 0.000000e+00 1685.0
13 TraesCS7A01G249500 chr3B 93.681 902 33 10 1 895 35475987 35475103 0.000000e+00 1328.0
14 TraesCS7A01G249500 chr2B 87.661 932 74 21 1034 1937 90632557 90633475 0.000000e+00 1046.0
15 TraesCS7A01G249500 chr2B 91.236 445 31 2 2169 2605 18096112 18096556 1.450000e-167 599.0
16 TraesCS7A01G249500 chr2B 93.086 405 25 2 1561 1964 771167971 771168373 8.700000e-165 590.0
17 TraesCS7A01G249500 chr2B 91.905 210 17 0 2612 2821 18096265 18096474 7.640000e-76 294.0
18 TraesCS7A01G249500 chr6B 86.490 755 70 17 944 1672 243235412 243234664 0.000000e+00 800.0
19 TraesCS7A01G249500 chr4A 82.103 989 104 42 1008 1961 727254067 727253117 0.000000e+00 778.0
20 TraesCS7A01G249500 chr4A 90.583 446 33 3 2171 2608 29524119 29524563 1.460000e-162 582.0
21 TraesCS7A01G249500 chr4A 89.552 268 16 6 2350 2608 499951034 499951298 2.090000e-86 329.0
22 TraesCS7A01G249500 chr5D 92.325 443 26 2 2171 2605 2679884 2680326 8.580000e-175 623.0
23 TraesCS7A01G249500 chr5D 92.857 210 15 0 2612 2821 2680035 2680244 3.530000e-79 305.0
24 TraesCS7A01G249500 chr3D 91.928 446 27 3 2168 2605 19309282 19309726 1.440000e-172 616.0
25 TraesCS7A01G249500 chr3D 90.783 217 18 1 2605 2821 403340038 403340252 3.560000e-74 289.0
26 TraesCS7A01G249500 chr3D 91.429 210 17 1 2612 2821 19309436 19309644 1.280000e-73 287.0
27 TraesCS7A01G249500 chr4D 91.051 447 30 4 2171 2608 449049647 449049202 1.870000e-166 595.0
28 TraesCS7A01G249500 chr4D 88.143 447 41 6 2168 2605 470132366 470132809 3.220000e-144 521.0
29 TraesCS7A01G249500 chr4D 85.746 449 44 9 2169 2608 405472254 405471817 9.210000e-125 457.0
30 TraesCS7A01G249500 chr4D 90.455 220 17 3 2603 2821 449049503 449049287 1.280000e-73 287.0
31 TraesCS7A01G249500 chr1A 92.910 409 24 3 1561 1968 74754733 74755137 8.700000e-165 590.0
32 TraesCS7A01G249500 chr1A 79.474 760 109 35 1 733 223817792 223817053 1.950000e-136 496.0
33 TraesCS7A01G249500 chr1D 90.625 448 31 4 2171 2608 364733492 364733046 4.050000e-163 584.0
34 TraesCS7A01G249500 chr1D 89.485 447 37 4 2171 2608 6372564 6372119 8.830000e-155 556.0
35 TraesCS7A01G249500 chr1D 91.304 207 18 0 2615 2821 364733337 364733131 1.650000e-72 283.0
36 TraesCS7A01G249500 chr5A 91.847 417 29 4 1561 1976 229496676 229497088 6.780000e-161 577.0
37 TraesCS7A01G249500 chr5A 80.674 771 96 33 1 735 10620995 10620242 1.480000e-152 549.0
38 TraesCS7A01G249500 chr2A 90.476 441 32 4 2173 2605 43456402 43456840 8.770000e-160 573.0
39 TraesCS7A01G249500 chr2A 90.952 210 19 0 2612 2821 43456549 43456758 1.650000e-72 283.0
40 TraesCS7A01G249500 chr6D 88.865 458 36 8 2161 2608 386220227 386219775 1.480000e-152 549.0
41 TraesCS7A01G249500 chr6D 86.123 454 43 9 2161 2605 218836553 218836995 3.290000e-129 472.0
42 TraesCS7A01G249500 chr6A 79.605 760 108 36 1 733 249211062 249211801 4.200000e-138 501.0
43 TraesCS7A01G249500 chr6A 92.271 207 16 0 2612 2818 593829586 593829792 7.640000e-76 294.0
44 TraesCS7A01G249500 chr7D 94.737 57 3 0 2117 2173 219718464 219718520 3.870000e-14 89.8
45 TraesCS7A01G249500 chr7D 94.737 57 3 0 2117 2173 219718798 219718854 3.870000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G249500 chr7A 232344908 232347728 2820 False 2772.5 5210 98.0490 1 2821 2 chr7A.!!$F2 2820
1 TraesCS7A01G249500 chr7A 608235723 608237687 1964 True 3489.0 3489 98.7790 1 1957 1 chr7A.!!$R4 1956
2 TraesCS7A01G249500 chr7A 511549804 511550544 740 True 1057.0 1057 92.8760 1 722 1 chr7A.!!$R3 721
3 TraesCS7A01G249500 chr7A 661879526 661880043 517 False 876.0 876 97.1150 1434 1953 1 chr7A.!!$F1 519
4 TraesCS7A01G249500 chr7A 9480996 9481737 741 True 472.0 472 78.9750 7 735 1 chr7A.!!$R1 728
5 TraesCS7A01G249500 chr3A 747647737 747649692 1955 False 3500.0 3500 99.0290 1 1949 1 chr3A.!!$F3 1948
6 TraesCS7A01G249500 chr3A 337496905 337498770 1865 False 3267.0 3267 98.3400 93 1951 1 chr3A.!!$F2 1858
7 TraesCS7A01G249500 chr3A 265372477 265373174 697 False 874.0 874 89.3560 1245 1948 1 chr3A.!!$F1 703
8 TraesCS7A01G249500 chr1B 4984699 4986650 1951 True 3445.0 3445 98.5200 1 1952 1 chr1B.!!$R1 1951
9 TraesCS7A01G249500 chr1B 65106569 65108502 1933 True 2457.0 2457 89.6970 1 1950 1 chr1B.!!$R2 1949
10 TraesCS7A01G249500 chr3B 35474086 35475987 1901 True 1506.5 1685 94.8215 1 1959 2 chr3B.!!$R1 1958
11 TraesCS7A01G249500 chr2B 90632557 90633475 918 False 1046.0 1046 87.6610 1034 1937 1 chr2B.!!$F1 903
12 TraesCS7A01G249500 chr6B 243234664 243235412 748 True 800.0 800 86.4900 944 1672 1 chr6B.!!$R1 728
13 TraesCS7A01G249500 chr4A 727253117 727254067 950 True 778.0 778 82.1030 1008 1961 1 chr4A.!!$R1 953
14 TraesCS7A01G249500 chr1A 223817053 223817792 739 True 496.0 496 79.4740 1 733 1 chr1A.!!$R1 732
15 TraesCS7A01G249500 chr5A 10620242 10620995 753 True 549.0 549 80.6740 1 735 1 chr5A.!!$R1 734
16 TraesCS7A01G249500 chr6A 249211062 249211801 739 False 501.0 501 79.6050 1 733 1 chr6A.!!$F1 732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
711 773 1.532316 GCACCCCCATCCCATCATG 60.532 63.158 0.0 0.0 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2270 2440 0.037605 CGGGTCTATTATGCGGGGTC 60.038 60.0 0.0 0.0 0.0 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
711 773 1.532316 GCACCCCCATCCCATCATG 60.532 63.158 0.00 0.00 0.00 3.07
1015 1129 2.264480 CGATGACCGAAGCCACCA 59.736 61.111 0.00 0.00 41.76 4.17
2008 2178 9.487790 AAAGATAAGATATAGAACTGCTCTTGC 57.512 33.333 0.00 0.00 35.41 4.01
2019 2189 3.296516 GCTCTTGCAAAATCCGTCG 57.703 52.632 0.00 0.00 39.41 5.12
2020 2190 0.796312 GCTCTTGCAAAATCCGTCGA 59.204 50.000 0.00 0.00 39.41 4.20
2021 2191 1.196808 GCTCTTGCAAAATCCGTCGAA 59.803 47.619 0.00 0.00 39.41 3.71
2022 2192 2.839474 CTCTTGCAAAATCCGTCGAAC 58.161 47.619 0.00 0.00 0.00 3.95
2023 2193 2.214347 TCTTGCAAAATCCGTCGAACA 58.786 42.857 0.00 0.00 0.00 3.18
2024 2194 2.032377 TCTTGCAAAATCCGTCGAACAC 60.032 45.455 0.00 0.00 0.00 3.32
2025 2195 1.300481 TGCAAAATCCGTCGAACACA 58.700 45.000 0.00 0.00 0.00 3.72
2026 2196 1.671328 TGCAAAATCCGTCGAACACAA 59.329 42.857 0.00 0.00 0.00 3.33
2027 2197 2.097629 TGCAAAATCCGTCGAACACAAA 59.902 40.909 0.00 0.00 0.00 2.83
2028 2198 3.243234 TGCAAAATCCGTCGAACACAAAT 60.243 39.130 0.00 0.00 0.00 2.32
2029 2199 4.023963 TGCAAAATCCGTCGAACACAAATA 60.024 37.500 0.00 0.00 0.00 1.40
2030 2200 4.553429 GCAAAATCCGTCGAACACAAATAG 59.447 41.667 0.00 0.00 0.00 1.73
2031 2201 5.615984 GCAAAATCCGTCGAACACAAATAGA 60.616 40.000 0.00 0.00 0.00 1.98
2032 2202 5.779806 AAATCCGTCGAACACAAATAGAG 57.220 39.130 0.00 0.00 0.00 2.43
2033 2203 4.713824 ATCCGTCGAACACAAATAGAGA 57.286 40.909 0.00 0.00 0.00 3.10
2034 2204 3.829948 TCCGTCGAACACAAATAGAGAC 58.170 45.455 0.00 0.00 0.00 3.36
2035 2205 2.592897 CCGTCGAACACAAATAGAGACG 59.407 50.000 7.94 7.94 46.22 4.18
2036 2206 2.026507 CGTCGAACACAAATAGAGACGC 59.973 50.000 2.26 0.00 42.25 5.19
2037 2207 3.243336 GTCGAACACAAATAGAGACGCT 58.757 45.455 0.00 0.00 0.00 5.07
2038 2208 3.673809 GTCGAACACAAATAGAGACGCTT 59.326 43.478 0.00 0.00 0.00 4.68
2039 2209 4.150098 GTCGAACACAAATAGAGACGCTTT 59.850 41.667 0.00 0.00 0.00 3.51
2040 2210 5.344128 GTCGAACACAAATAGAGACGCTTTA 59.656 40.000 0.00 0.00 0.00 1.85
2041 2211 5.571741 TCGAACACAAATAGAGACGCTTTAG 59.428 40.000 0.00 0.00 0.00 1.85
2042 2212 5.571741 CGAACACAAATAGAGACGCTTTAGA 59.428 40.000 0.00 0.00 0.00 2.10
2043 2213 6.237332 CGAACACAAATAGAGACGCTTTAGAG 60.237 42.308 0.00 0.00 0.00 2.43
2044 2214 6.026947 ACACAAATAGAGACGCTTTAGAGT 57.973 37.500 0.00 0.00 0.00 3.24
2045 2215 5.864474 ACACAAATAGAGACGCTTTAGAGTG 59.136 40.000 0.00 0.00 39.33 3.51
2046 2216 6.093404 CACAAATAGAGACGCTTTAGAGTGA 58.907 40.000 0.07 0.00 36.87 3.41
2047 2217 6.586463 CACAAATAGAGACGCTTTAGAGTGAA 59.414 38.462 0.07 0.00 36.87 3.18
2048 2218 7.116376 CACAAATAGAGACGCTTTAGAGTGAAA 59.884 37.037 0.07 0.00 36.87 2.69
2049 2219 7.819900 ACAAATAGAGACGCTTTAGAGTGAAAT 59.180 33.333 0.07 0.00 36.87 2.17
2050 2220 8.660373 CAAATAGAGACGCTTTAGAGTGAAATT 58.340 33.333 0.07 0.00 36.87 1.82
2051 2221 7.995463 ATAGAGACGCTTTAGAGTGAAATTC 57.005 36.000 0.07 0.00 36.87 2.17
2052 2222 6.031751 AGAGACGCTTTAGAGTGAAATTCT 57.968 37.500 0.07 0.00 36.60 2.40
2053 2223 7.159322 AGAGACGCTTTAGAGTGAAATTCTA 57.841 36.000 0.07 0.00 33.66 2.10
2054 2224 7.777095 AGAGACGCTTTAGAGTGAAATTCTAT 58.223 34.615 0.07 0.00 34.96 1.98
2055 2225 8.254508 AGAGACGCTTTAGAGTGAAATTCTATT 58.745 33.333 0.07 0.00 34.96 1.73
2056 2226 8.413899 AGACGCTTTAGAGTGAAATTCTATTC 57.586 34.615 0.07 0.00 34.96 1.75
2057 2227 8.035394 AGACGCTTTAGAGTGAAATTCTATTCA 58.965 33.333 0.07 0.00 34.96 2.57
2058 2228 8.723942 ACGCTTTAGAGTGAAATTCTATTCAT 57.276 30.769 0.07 0.00 41.09 2.57
2059 2229 8.821894 ACGCTTTAGAGTGAAATTCTATTCATC 58.178 33.333 0.07 0.00 41.09 2.92
2060 2230 8.279103 CGCTTTAGAGTGAAATTCTATTCATCC 58.721 37.037 0.00 0.00 41.09 3.51
2061 2231 8.563732 GCTTTAGAGTGAAATTCTATTCATCCC 58.436 37.037 0.00 0.00 41.09 3.85
2062 2232 9.618890 CTTTAGAGTGAAATTCTATTCATCCCA 57.381 33.333 0.00 0.00 41.09 4.37
2063 2233 9.618890 TTTAGAGTGAAATTCTATTCATCCCAG 57.381 33.333 0.00 0.00 41.09 4.45
2064 2234 7.443302 AGAGTGAAATTCTATTCATCCCAGA 57.557 36.000 0.00 0.00 41.09 3.86
2065 2235 8.043429 AGAGTGAAATTCTATTCATCCCAGAT 57.957 34.615 0.00 0.00 41.09 2.90
2066 2236 8.501070 AGAGTGAAATTCTATTCATCCCAGATT 58.499 33.333 0.00 0.00 41.09 2.40
2067 2237 9.784531 GAGTGAAATTCTATTCATCCCAGATTA 57.215 33.333 0.00 0.00 41.09 1.75
2068 2238 9.566432 AGTGAAATTCTATTCATCCCAGATTAC 57.434 33.333 0.00 0.00 41.09 1.89
2069 2239 9.342308 GTGAAATTCTATTCATCCCAGATTACA 57.658 33.333 0.00 0.00 41.09 2.41
2070 2240 9.342308 TGAAATTCTATTCATCCCAGATTACAC 57.658 33.333 0.00 0.00 34.50 2.90
2071 2241 8.697507 AAATTCTATTCATCCCAGATTACACC 57.302 34.615 0.00 0.00 0.00 4.16
2072 2242 7.639062 ATTCTATTCATCCCAGATTACACCT 57.361 36.000 0.00 0.00 0.00 4.00
2073 2243 8.742125 ATTCTATTCATCCCAGATTACACCTA 57.258 34.615 0.00 0.00 0.00 3.08
2074 2244 8.742125 TTCTATTCATCCCAGATTACACCTAT 57.258 34.615 0.00 0.00 0.00 2.57
2075 2245 8.138928 TCTATTCATCCCAGATTACACCTATG 57.861 38.462 0.00 0.00 0.00 2.23
2076 2246 6.770286 ATTCATCCCAGATTACACCTATGT 57.230 37.500 0.00 0.00 43.30 2.29
2077 2247 5.808366 TCATCCCAGATTACACCTATGTC 57.192 43.478 0.00 0.00 40.48 3.06
2078 2248 5.215845 TCATCCCAGATTACACCTATGTCA 58.784 41.667 0.00 0.00 40.48 3.58
2079 2249 5.070446 TCATCCCAGATTACACCTATGTCAC 59.930 44.000 0.00 0.00 40.48 3.67
2080 2250 3.383505 TCCCAGATTACACCTATGTCACG 59.616 47.826 0.00 0.00 40.48 4.35
2081 2251 3.132289 CCCAGATTACACCTATGTCACGT 59.868 47.826 0.00 0.00 40.48 4.49
2082 2252 4.112634 CCAGATTACACCTATGTCACGTG 58.887 47.826 9.94 9.94 40.48 4.49
2083 2253 4.381612 CCAGATTACACCTATGTCACGTGT 60.382 45.833 16.51 0.00 43.01 4.49
2084 2254 4.562789 CAGATTACACCTATGTCACGTGTG 59.437 45.833 16.51 6.99 40.78 3.82
2085 2255 3.306917 TTACACCTATGTCACGTGTGG 57.693 47.619 16.51 12.90 40.78 4.17
2086 2256 1.045407 ACACCTATGTCACGTGTGGT 58.955 50.000 16.51 13.50 39.22 4.16
2087 2257 1.414919 ACACCTATGTCACGTGTGGTT 59.585 47.619 16.51 2.02 39.22 3.67
2088 2258 2.158871 ACACCTATGTCACGTGTGGTTT 60.159 45.455 16.51 7.66 39.22 3.27
2089 2259 2.875933 CACCTATGTCACGTGTGGTTTT 59.124 45.455 16.51 0.00 0.00 2.43
2090 2260 2.875933 ACCTATGTCACGTGTGGTTTTG 59.124 45.455 16.51 3.00 0.00 2.44
2091 2261 2.350388 CCTATGTCACGTGTGGTTTTGC 60.350 50.000 16.51 0.00 0.00 3.68
2092 2262 1.098869 ATGTCACGTGTGGTTTTGCA 58.901 45.000 16.51 3.79 0.00 4.08
2093 2263 1.098869 TGTCACGTGTGGTTTTGCAT 58.901 45.000 16.51 0.00 0.00 3.96
2094 2264 1.474478 TGTCACGTGTGGTTTTGCATT 59.526 42.857 16.51 0.00 0.00 3.56
2095 2265 2.116366 GTCACGTGTGGTTTTGCATTC 58.884 47.619 16.51 0.00 0.00 2.67
2096 2266 1.066303 TCACGTGTGGTTTTGCATTCC 59.934 47.619 16.51 0.00 0.00 3.01
2097 2267 1.066908 CACGTGTGGTTTTGCATTCCT 59.933 47.619 7.58 0.00 0.00 3.36
2098 2268 1.754226 ACGTGTGGTTTTGCATTCCTT 59.246 42.857 0.00 0.00 0.00 3.36
2099 2269 2.126467 CGTGTGGTTTTGCATTCCTTG 58.874 47.619 0.00 0.00 0.00 3.61
2100 2270 2.223688 CGTGTGGTTTTGCATTCCTTGA 60.224 45.455 0.00 0.00 0.00 3.02
2101 2271 3.736433 CGTGTGGTTTTGCATTCCTTGAA 60.736 43.478 0.00 0.00 0.00 2.69
2102 2272 3.803778 GTGTGGTTTTGCATTCCTTGAAG 59.196 43.478 0.00 0.00 0.00 3.02
2103 2273 3.703556 TGTGGTTTTGCATTCCTTGAAGA 59.296 39.130 0.00 0.00 0.00 2.87
2104 2274 4.051237 GTGGTTTTGCATTCCTTGAAGAC 58.949 43.478 0.00 0.00 0.00 3.01
2105 2275 3.703556 TGGTTTTGCATTCCTTGAAGACA 59.296 39.130 0.00 0.00 0.00 3.41
2106 2276 4.051237 GGTTTTGCATTCCTTGAAGACAC 58.949 43.478 0.00 0.00 0.00 3.67
2107 2277 3.624326 TTTGCATTCCTTGAAGACACG 57.376 42.857 0.00 0.00 0.00 4.49
2108 2278 2.542020 TGCATTCCTTGAAGACACGA 57.458 45.000 0.00 0.00 0.00 4.35
2109 2279 2.416747 TGCATTCCTTGAAGACACGAG 58.583 47.619 0.00 0.00 0.00 4.18
2110 2280 2.224281 TGCATTCCTTGAAGACACGAGT 60.224 45.455 0.00 0.00 0.00 4.18
2111 2281 2.413453 GCATTCCTTGAAGACACGAGTC 59.587 50.000 4.68 4.68 45.31 3.36
2112 2282 2.814280 TTCCTTGAAGACACGAGTCC 57.186 50.000 9.50 0.00 46.15 3.85
2113 2283 1.699730 TCCTTGAAGACACGAGTCCA 58.300 50.000 9.50 0.00 46.15 4.02
2114 2284 2.248248 TCCTTGAAGACACGAGTCCAT 58.752 47.619 9.50 0.00 46.15 3.41
2115 2285 2.231478 TCCTTGAAGACACGAGTCCATC 59.769 50.000 9.50 9.05 46.15 3.51
2116 2286 2.232452 CCTTGAAGACACGAGTCCATCT 59.768 50.000 9.50 0.00 46.15 2.90
2117 2287 3.249091 CTTGAAGACACGAGTCCATCTG 58.751 50.000 9.50 3.39 46.15 2.90
2118 2288 1.067565 TGAAGACACGAGTCCATCTGC 60.068 52.381 9.50 0.00 46.15 4.26
2119 2289 1.203523 GAAGACACGAGTCCATCTGCT 59.796 52.381 9.50 0.00 46.15 4.24
2120 2290 0.814457 AGACACGAGTCCATCTGCTC 59.186 55.000 9.50 0.00 46.15 4.26
2121 2291 0.814457 GACACGAGTCCATCTGCTCT 59.186 55.000 1.01 0.00 38.89 4.09
2122 2292 1.203523 GACACGAGTCCATCTGCTCTT 59.796 52.381 1.01 0.00 38.89 2.85
2123 2293 2.423892 GACACGAGTCCATCTGCTCTTA 59.576 50.000 1.01 0.00 38.89 2.10
2124 2294 3.027412 ACACGAGTCCATCTGCTCTTAT 58.973 45.455 0.00 0.00 0.00 1.73
2125 2295 3.449018 ACACGAGTCCATCTGCTCTTATT 59.551 43.478 0.00 0.00 0.00 1.40
2126 2296 4.047822 CACGAGTCCATCTGCTCTTATTC 58.952 47.826 0.00 0.00 0.00 1.75
2127 2297 3.957497 ACGAGTCCATCTGCTCTTATTCT 59.043 43.478 0.00 0.00 0.00 2.40
2128 2298 5.009110 CACGAGTCCATCTGCTCTTATTCTA 59.991 44.000 0.00 0.00 0.00 2.10
2129 2299 5.772672 ACGAGTCCATCTGCTCTTATTCTAT 59.227 40.000 0.00 0.00 0.00 1.98
2130 2300 6.266558 ACGAGTCCATCTGCTCTTATTCTATT 59.733 38.462 0.00 0.00 0.00 1.73
2131 2301 6.806249 CGAGTCCATCTGCTCTTATTCTATTC 59.194 42.308 0.00 0.00 0.00 1.75
2132 2302 7.003402 AGTCCATCTGCTCTTATTCTATTCC 57.997 40.000 0.00 0.00 0.00 3.01
2133 2303 5.866633 GTCCATCTGCTCTTATTCTATTCCG 59.133 44.000 0.00 0.00 0.00 4.30
2134 2304 5.540337 TCCATCTGCTCTTATTCTATTCCGT 59.460 40.000 0.00 0.00 0.00 4.69
2135 2305 6.042093 TCCATCTGCTCTTATTCTATTCCGTT 59.958 38.462 0.00 0.00 0.00 4.44
2136 2306 6.146837 CCATCTGCTCTTATTCTATTCCGTTG 59.853 42.308 0.00 0.00 0.00 4.10
2137 2307 6.222038 TCTGCTCTTATTCTATTCCGTTGT 57.778 37.500 0.00 0.00 0.00 3.32
2138 2308 6.273825 TCTGCTCTTATTCTATTCCGTTGTC 58.726 40.000 0.00 0.00 0.00 3.18
2139 2309 5.972935 TGCTCTTATTCTATTCCGTTGTCA 58.027 37.500 0.00 0.00 0.00 3.58
2140 2310 6.403049 TGCTCTTATTCTATTCCGTTGTCAA 58.597 36.000 0.00 0.00 0.00 3.18
2141 2311 7.047891 TGCTCTTATTCTATTCCGTTGTCAAT 58.952 34.615 0.00 0.00 0.00 2.57
2142 2312 7.224753 TGCTCTTATTCTATTCCGTTGTCAATC 59.775 37.037 0.00 0.00 0.00 2.67
2143 2313 7.439655 GCTCTTATTCTATTCCGTTGTCAATCT 59.560 37.037 0.00 0.00 0.00 2.40
2144 2314 8.648557 TCTTATTCTATTCCGTTGTCAATCTG 57.351 34.615 0.00 0.00 0.00 2.90
2145 2315 5.741388 ATTCTATTCCGTTGTCAATCTGC 57.259 39.130 0.00 0.00 0.00 4.26
2146 2316 4.200838 TCTATTCCGTTGTCAATCTGCA 57.799 40.909 0.00 0.00 0.00 4.41
2147 2317 3.932710 TCTATTCCGTTGTCAATCTGCAC 59.067 43.478 0.00 0.00 0.00 4.57
2148 2318 1.960417 TTCCGTTGTCAATCTGCACA 58.040 45.000 0.00 0.00 0.00 4.57
2149 2319 1.960417 TCCGTTGTCAATCTGCACAA 58.040 45.000 0.00 0.00 0.00 3.33
2150 2320 1.872952 TCCGTTGTCAATCTGCACAAG 59.127 47.619 0.00 0.00 33.16 3.16
2151 2321 1.664016 CCGTTGTCAATCTGCACAAGC 60.664 52.381 0.00 0.00 42.57 4.01
2163 2333 2.907910 GCACAAGCATGTTAGACCTG 57.092 50.000 0.00 0.00 37.82 4.00
2164 2334 2.154462 GCACAAGCATGTTAGACCTGT 58.846 47.619 0.00 0.00 37.82 4.00
2165 2335 2.095567 GCACAAGCATGTTAGACCTGTG 60.096 50.000 6.88 6.88 37.82 3.66
2166 2336 3.141398 CACAAGCATGTTAGACCTGTGT 58.859 45.455 0.00 0.00 37.82 3.72
2167 2337 4.314961 CACAAGCATGTTAGACCTGTGTA 58.685 43.478 0.00 0.00 37.82 2.90
2168 2338 4.937620 CACAAGCATGTTAGACCTGTGTAT 59.062 41.667 0.00 0.00 37.82 2.29
2169 2339 5.412594 CACAAGCATGTTAGACCTGTGTATT 59.587 40.000 0.00 0.00 37.82 1.89
2170 2340 6.593770 CACAAGCATGTTAGACCTGTGTATTA 59.406 38.462 0.00 0.00 37.82 0.98
2171 2341 6.818644 ACAAGCATGTTAGACCTGTGTATTAG 59.181 38.462 0.00 0.00 35.91 1.73
2172 2342 6.791867 AGCATGTTAGACCTGTGTATTAGA 57.208 37.500 0.00 0.00 0.00 2.10
2173 2343 6.810911 AGCATGTTAGACCTGTGTATTAGAG 58.189 40.000 0.00 0.00 0.00 2.43
2174 2344 5.463724 GCATGTTAGACCTGTGTATTAGAGC 59.536 44.000 0.00 0.00 0.00 4.09
2175 2345 6.573434 CATGTTAGACCTGTGTATTAGAGCA 58.427 40.000 0.00 0.00 0.00 4.26
2176 2346 6.599356 TGTTAGACCTGTGTATTAGAGCAA 57.401 37.500 0.00 0.00 0.00 3.91
2177 2347 6.395629 TGTTAGACCTGTGTATTAGAGCAAC 58.604 40.000 0.00 0.00 0.00 4.17
2178 2348 6.210784 TGTTAGACCTGTGTATTAGAGCAACT 59.789 38.462 0.00 0.00 0.00 3.16
2179 2349 5.331876 AGACCTGTGTATTAGAGCAACTC 57.668 43.478 0.00 0.00 0.00 3.01
2180 2350 5.020132 AGACCTGTGTATTAGAGCAACTCT 58.980 41.667 2.23 2.23 43.83 3.24
2181 2351 6.188407 AGACCTGTGTATTAGAGCAACTCTA 58.812 40.000 0.16 0.16 41.50 2.43
2189 2359 4.803098 TTAGAGCAACTCTAACAGACCC 57.197 45.455 11.99 0.00 44.85 4.46
2190 2360 1.903183 AGAGCAACTCTAACAGACCCC 59.097 52.381 0.00 0.00 39.28 4.95
2191 2361 0.608640 AGCAACTCTAACAGACCCCG 59.391 55.000 0.00 0.00 0.00 5.73
2192 2362 1.019805 GCAACTCTAACAGACCCCGC 61.020 60.000 0.00 0.00 0.00 6.13
2193 2363 0.320374 CAACTCTAACAGACCCCGCA 59.680 55.000 0.00 0.00 0.00 5.69
2194 2364 1.066143 CAACTCTAACAGACCCCGCAT 60.066 52.381 0.00 0.00 0.00 4.73
2195 2365 0.824759 ACTCTAACAGACCCCGCATC 59.175 55.000 0.00 0.00 0.00 3.91
2196 2366 0.105039 CTCTAACAGACCCCGCATCC 59.895 60.000 0.00 0.00 0.00 3.51
2197 2367 0.325296 TCTAACAGACCCCGCATCCT 60.325 55.000 0.00 0.00 0.00 3.24
2198 2368 0.541863 CTAACAGACCCCGCATCCTT 59.458 55.000 0.00 0.00 0.00 3.36
2199 2369 0.539986 TAACAGACCCCGCATCCTTC 59.460 55.000 0.00 0.00 0.00 3.46
2200 2370 2.190578 CAGACCCCGCATCCTTCC 59.809 66.667 0.00 0.00 0.00 3.46
2201 2371 2.285368 AGACCCCGCATCCTTCCA 60.285 61.111 0.00 0.00 0.00 3.53
2202 2372 1.923395 AGACCCCGCATCCTTCCAA 60.923 57.895 0.00 0.00 0.00 3.53
2203 2373 1.749258 GACCCCGCATCCTTCCAAC 60.749 63.158 0.00 0.00 0.00 3.77
2204 2374 2.440247 CCCCGCATCCTTCCAACC 60.440 66.667 0.00 0.00 0.00 3.77
2205 2375 2.440247 CCCGCATCCTTCCAACCC 60.440 66.667 0.00 0.00 0.00 4.11
2206 2376 2.824041 CCGCATCCTTCCAACCCG 60.824 66.667 0.00 0.00 0.00 5.28
2207 2377 3.508840 CGCATCCTTCCAACCCGC 61.509 66.667 0.00 0.00 0.00 6.13
2208 2378 2.361104 GCATCCTTCCAACCCGCA 60.361 61.111 0.00 0.00 0.00 5.69
2209 2379 1.976474 GCATCCTTCCAACCCGCAA 60.976 57.895 0.00 0.00 0.00 4.85
2210 2380 1.531739 GCATCCTTCCAACCCGCAAA 61.532 55.000 0.00 0.00 0.00 3.68
2211 2381 0.965439 CATCCTTCCAACCCGCAAAA 59.035 50.000 0.00 0.00 0.00 2.44
2212 2382 0.966179 ATCCTTCCAACCCGCAAAAC 59.034 50.000 0.00 0.00 0.00 2.43
2213 2383 0.395862 TCCTTCCAACCCGCAAAACA 60.396 50.000 0.00 0.00 0.00 2.83
2214 2384 0.678950 CCTTCCAACCCGCAAAACAT 59.321 50.000 0.00 0.00 0.00 2.71
2215 2385 1.069978 CCTTCCAACCCGCAAAACATT 59.930 47.619 0.00 0.00 0.00 2.71
2216 2386 2.484594 CCTTCCAACCCGCAAAACATTT 60.485 45.455 0.00 0.00 0.00 2.32
2217 2387 2.990066 TCCAACCCGCAAAACATTTT 57.010 40.000 0.00 0.00 0.00 1.82
2218 2388 3.268023 TCCAACCCGCAAAACATTTTT 57.732 38.095 0.00 0.00 0.00 1.94
2219 2389 2.939103 TCCAACCCGCAAAACATTTTTG 59.061 40.909 6.96 6.96 0.00 2.44
2227 2397 3.237466 CAAAACATTTTTGCAGGTCGC 57.763 42.857 0.00 0.00 42.89 5.19
2228 2398 1.486439 AAACATTTTTGCAGGTCGCG 58.514 45.000 0.00 0.00 46.97 5.87
2229 2399 0.318614 AACATTTTTGCAGGTCGCGG 60.319 50.000 6.13 0.00 46.97 6.46
2230 2400 1.169661 ACATTTTTGCAGGTCGCGGA 61.170 50.000 6.13 0.00 46.97 5.54
2231 2401 0.039617 CATTTTTGCAGGTCGCGGAA 60.040 50.000 6.13 0.00 46.97 4.30
2232 2402 0.671251 ATTTTTGCAGGTCGCGGAAA 59.329 45.000 6.13 0.00 46.97 3.13
2233 2403 0.456221 TTTTTGCAGGTCGCGGAAAA 59.544 45.000 6.13 0.00 46.97 2.29
2234 2404 0.248702 TTTTGCAGGTCGCGGAAAAC 60.249 50.000 6.13 0.00 46.97 2.43
2235 2405 2.381665 TTTGCAGGTCGCGGAAAACG 62.382 55.000 6.13 0.00 46.97 3.60
2271 2441 4.865761 GACGGCCGCGTATGCAGA 62.866 66.667 28.58 0.00 42.97 4.26
2278 2448 4.830765 GCGTATGCAGACCCCGCA 62.831 66.667 5.78 0.00 43.53 5.69
2285 2455 1.419381 TGCAGACCCCGCATAATAGA 58.581 50.000 0.00 0.00 33.55 1.98
2286 2456 1.070134 TGCAGACCCCGCATAATAGAC 59.930 52.381 0.00 0.00 33.55 2.59
2287 2457 1.608283 GCAGACCCCGCATAATAGACC 60.608 57.143 0.00 0.00 0.00 3.85
2288 2458 1.002087 CAGACCCCGCATAATAGACCC 59.998 57.143 0.00 0.00 0.00 4.46
2289 2459 0.037605 GACCCCGCATAATAGACCCG 60.038 60.000 0.00 0.00 0.00 5.28
2290 2460 0.761702 ACCCCGCATAATAGACCCGT 60.762 55.000 0.00 0.00 0.00 5.28
2291 2461 1.259609 CCCCGCATAATAGACCCGTA 58.740 55.000 0.00 0.00 0.00 4.02
2292 2462 1.619827 CCCCGCATAATAGACCCGTAA 59.380 52.381 0.00 0.00 0.00 3.18
2293 2463 2.037511 CCCCGCATAATAGACCCGTAAA 59.962 50.000 0.00 0.00 0.00 2.01
2294 2464 3.494749 CCCCGCATAATAGACCCGTAAAA 60.495 47.826 0.00 0.00 0.00 1.52
2295 2465 4.128643 CCCGCATAATAGACCCGTAAAAA 58.871 43.478 0.00 0.00 0.00 1.94
2337 2507 1.033574 TTTTACAGGTTGGGGTTGCG 58.966 50.000 0.00 0.00 0.00 4.85
2338 2508 0.824182 TTTACAGGTTGGGGTTGCGG 60.824 55.000 0.00 0.00 0.00 5.69
2339 2509 3.853698 TACAGGTTGGGGTTGCGGC 62.854 63.158 0.00 0.00 0.00 6.53
2348 2518 4.980805 GGTTGCGGCGTCTGACCA 62.981 66.667 9.37 0.00 0.00 4.02
2349 2519 3.414700 GTTGCGGCGTCTGACCAG 61.415 66.667 9.37 0.00 0.00 4.00
2350 2520 4.680237 TTGCGGCGTCTGACCAGG 62.680 66.667 9.37 0.00 0.00 4.45
2368 2538 4.821589 CGCAGCTCCTTCCGACCC 62.822 72.222 0.00 0.00 0.00 4.46
2369 2539 3.706373 GCAGCTCCTTCCGACCCA 61.706 66.667 0.00 0.00 0.00 4.51
2370 2540 3.036429 GCAGCTCCTTCCGACCCAT 62.036 63.158 0.00 0.00 0.00 4.00
2371 2541 1.686325 GCAGCTCCTTCCGACCCATA 61.686 60.000 0.00 0.00 0.00 2.74
2372 2542 0.830648 CAGCTCCTTCCGACCCATAA 59.169 55.000 0.00 0.00 0.00 1.90
2373 2543 1.209504 CAGCTCCTTCCGACCCATAAA 59.790 52.381 0.00 0.00 0.00 1.40
2374 2544 1.913419 AGCTCCTTCCGACCCATAAAA 59.087 47.619 0.00 0.00 0.00 1.52
2375 2545 2.014857 GCTCCTTCCGACCCATAAAAC 58.985 52.381 0.00 0.00 0.00 2.43
2376 2546 2.355818 GCTCCTTCCGACCCATAAAACT 60.356 50.000 0.00 0.00 0.00 2.66
2377 2547 3.872630 GCTCCTTCCGACCCATAAAACTT 60.873 47.826 0.00 0.00 0.00 2.66
2378 2548 4.624604 GCTCCTTCCGACCCATAAAACTTA 60.625 45.833 0.00 0.00 0.00 2.24
2379 2549 5.493809 CTCCTTCCGACCCATAAAACTTAA 58.506 41.667 0.00 0.00 0.00 1.85
2380 2550 5.878627 TCCTTCCGACCCATAAAACTTAAA 58.121 37.500 0.00 0.00 0.00 1.52
2381 2551 6.486941 TCCTTCCGACCCATAAAACTTAAAT 58.513 36.000 0.00 0.00 0.00 1.40
2382 2552 6.949463 TCCTTCCGACCCATAAAACTTAAATT 59.051 34.615 0.00 0.00 0.00 1.82
2383 2553 7.452189 TCCTTCCGACCCATAAAACTTAAATTT 59.548 33.333 0.00 0.00 0.00 1.82
2384 2554 8.741841 CCTTCCGACCCATAAAACTTAAATTTA 58.258 33.333 0.00 0.00 0.00 1.40
2385 2555 9.563898 CTTCCGACCCATAAAACTTAAATTTAC 57.436 33.333 0.00 0.00 0.00 2.01
2386 2556 8.632906 TCCGACCCATAAAACTTAAATTTACA 57.367 30.769 0.00 0.00 0.00 2.41
2387 2557 9.075678 TCCGACCCATAAAACTTAAATTTACAA 57.924 29.630 0.00 0.00 0.00 2.41
2388 2558 9.131416 CCGACCCATAAAACTTAAATTTACAAC 57.869 33.333 0.00 0.00 0.00 3.32
2389 2559 9.902196 CGACCCATAAAACTTAAATTTACAACT 57.098 29.630 0.00 0.00 0.00 3.16
2410 2580 9.090692 ACAACTTAATTTGATCTTGCATATTGC 57.909 29.630 12.06 0.00 45.29 3.56
2464 2634 9.807649 ATACAAAAGATATCACCAAATCTTTGC 57.192 29.630 5.32 0.00 46.59 3.68
2465 2635 7.899973 ACAAAAGATATCACCAAATCTTTGCT 58.100 30.769 5.32 0.00 46.59 3.91
2466 2636 9.023962 ACAAAAGATATCACCAAATCTTTGCTA 57.976 29.630 5.32 0.00 46.59 3.49
2467 2637 9.512435 CAAAAGATATCACCAAATCTTTGCTAG 57.488 33.333 5.32 0.00 46.59 3.42
2468 2638 9.466497 AAAAGATATCACCAAATCTTTGCTAGA 57.534 29.630 5.32 0.00 46.59 2.43
2469 2639 9.466497 AAAGATATCACCAAATCTTTGCTAGAA 57.534 29.630 5.32 0.00 45.91 2.10
2470 2640 9.638176 AAGATATCACCAAATCTTTGCTAGAAT 57.362 29.630 5.32 0.00 38.93 2.40
2490 2660 7.672983 AGAATAGCAAGATCAAAGAAAACGA 57.327 32.000 0.00 0.00 0.00 3.85
2491 2661 7.746929 AGAATAGCAAGATCAAAGAAAACGAG 58.253 34.615 0.00 0.00 0.00 4.18
2492 2662 7.604164 AGAATAGCAAGATCAAAGAAAACGAGA 59.396 33.333 0.00 0.00 0.00 4.04
2493 2663 7.672983 ATAGCAAGATCAAAGAAAACGAGAA 57.327 32.000 0.00 0.00 0.00 2.87
2494 2664 5.752712 AGCAAGATCAAAGAAAACGAGAAC 58.247 37.500 0.00 0.00 0.00 3.01
2495 2665 5.529060 AGCAAGATCAAAGAAAACGAGAACT 59.471 36.000 0.00 0.00 0.00 3.01
2496 2666 6.706270 AGCAAGATCAAAGAAAACGAGAACTA 59.294 34.615 0.00 0.00 0.00 2.24
2497 2667 6.792726 GCAAGATCAAAGAAAACGAGAACTAC 59.207 38.462 0.00 0.00 0.00 2.73
2498 2668 7.518370 GCAAGATCAAAGAAAACGAGAACTACA 60.518 37.037 0.00 0.00 0.00 2.74
2499 2669 8.335356 CAAGATCAAAGAAAACGAGAACTACAA 58.665 33.333 0.00 0.00 0.00 2.41
2500 2670 8.077836 AGATCAAAGAAAACGAGAACTACAAG 57.922 34.615 0.00 0.00 0.00 3.16
2501 2671 7.711339 AGATCAAAGAAAACGAGAACTACAAGT 59.289 33.333 0.00 0.00 0.00 3.16
2502 2672 7.605410 TCAAAGAAAACGAGAACTACAAGTT 57.395 32.000 0.00 0.00 41.95 2.66
2503 2673 8.036273 TCAAAGAAAACGAGAACTACAAGTTT 57.964 30.769 0.00 0.00 38.80 2.66
2504 2674 7.960738 TCAAAGAAAACGAGAACTACAAGTTTG 59.039 33.333 0.00 0.00 38.80 2.93
2505 2675 5.807344 AGAAAACGAGAACTACAAGTTTGC 58.193 37.500 0.00 0.00 38.80 3.68
2506 2676 5.353123 AGAAAACGAGAACTACAAGTTTGCA 59.647 36.000 0.00 0.00 38.80 4.08
2507 2677 5.751243 AAACGAGAACTACAAGTTTGCAT 57.249 34.783 0.00 0.00 38.80 3.96
2508 2678 5.751243 AACGAGAACTACAAGTTTGCATT 57.249 34.783 0.00 0.00 38.80 3.56
2509 2679 5.751243 ACGAGAACTACAAGTTTGCATTT 57.249 34.783 0.00 0.00 38.80 2.32
2510 2680 6.131544 ACGAGAACTACAAGTTTGCATTTT 57.868 33.333 0.00 0.00 38.80 1.82
2511 2681 7.254227 ACGAGAACTACAAGTTTGCATTTTA 57.746 32.000 0.00 0.00 38.80 1.52
2512 2682 7.352739 ACGAGAACTACAAGTTTGCATTTTAG 58.647 34.615 0.00 0.00 38.80 1.85
2513 2683 7.225931 ACGAGAACTACAAGTTTGCATTTTAGA 59.774 33.333 0.00 0.00 38.80 2.10
2514 2684 8.067784 CGAGAACTACAAGTTTGCATTTTAGAA 58.932 33.333 0.00 0.00 38.80 2.10
2515 2685 9.387123 GAGAACTACAAGTTTGCATTTTAGAAG 57.613 33.333 0.00 0.00 38.80 2.85
2516 2686 9.120538 AGAACTACAAGTTTGCATTTTAGAAGA 57.879 29.630 0.00 0.00 38.80 2.87
2517 2687 9.899226 GAACTACAAGTTTGCATTTTAGAAGAT 57.101 29.630 0.00 0.00 38.80 2.40
2521 2691 8.593492 ACAAGTTTGCATTTTAGAAGATTTCC 57.407 30.769 0.00 0.00 0.00 3.13
2522 2692 8.203485 ACAAGTTTGCATTTTAGAAGATTTCCA 58.797 29.630 0.00 0.00 0.00 3.53
2523 2693 9.044150 CAAGTTTGCATTTTAGAAGATTTCCAA 57.956 29.630 0.00 0.00 0.00 3.53
2524 2694 9.783081 AAGTTTGCATTTTAGAAGATTTCCAAT 57.217 25.926 0.00 0.00 0.00 3.16
2525 2695 9.783081 AGTTTGCATTTTAGAAGATTTCCAATT 57.217 25.926 0.00 0.00 0.00 2.32
2528 2698 8.776376 TGCATTTTAGAAGATTTCCAATTTCC 57.224 30.769 0.00 0.00 0.00 3.13
2529 2699 8.373981 TGCATTTTAGAAGATTTCCAATTTCCA 58.626 29.630 0.00 0.00 0.00 3.53
2530 2700 9.387257 GCATTTTAGAAGATTTCCAATTTCCAT 57.613 29.630 0.00 0.00 0.00 3.41
2536 2706 7.550712 AGAAGATTTCCAATTTCCATAACTGC 58.449 34.615 0.00 0.00 0.00 4.40
2537 2707 7.398332 AGAAGATTTCCAATTTCCATAACTGCT 59.602 33.333 0.00 0.00 0.00 4.24
2538 2708 7.105241 AGATTTCCAATTTCCATAACTGCTC 57.895 36.000 0.00 0.00 0.00 4.26
2539 2709 5.659440 TTTCCAATTTCCATAACTGCTCC 57.341 39.130 0.00 0.00 0.00 4.70
2540 2710 3.631250 TCCAATTTCCATAACTGCTCCC 58.369 45.455 0.00 0.00 0.00 4.30
2541 2711 3.011144 TCCAATTTCCATAACTGCTCCCA 59.989 43.478 0.00 0.00 0.00 4.37
2542 2712 3.131046 CCAATTTCCATAACTGCTCCCAC 59.869 47.826 0.00 0.00 0.00 4.61
2543 2713 4.019174 CAATTTCCATAACTGCTCCCACT 58.981 43.478 0.00 0.00 0.00 4.00
2544 2714 5.192927 CAATTTCCATAACTGCTCCCACTA 58.807 41.667 0.00 0.00 0.00 2.74
2545 2715 4.487714 TTTCCATAACTGCTCCCACTAG 57.512 45.455 0.00 0.00 0.00 2.57
2546 2716 3.116096 TCCATAACTGCTCCCACTAGT 57.884 47.619 0.00 0.00 0.00 2.57
2547 2717 3.450904 TCCATAACTGCTCCCACTAGTT 58.549 45.455 0.00 0.00 38.19 2.24
2548 2718 3.197766 TCCATAACTGCTCCCACTAGTTG 59.802 47.826 0.00 0.00 36.22 3.16
2549 2719 3.535561 CATAACTGCTCCCACTAGTTGG 58.464 50.000 6.66 6.66 46.47 3.77
2566 2736 9.239002 CACTAGTTGGACTAATATCTTCTTTCG 57.761 37.037 0.00 0.00 29.00 3.46
2567 2737 8.968969 ACTAGTTGGACTAATATCTTCTTTCGT 58.031 33.333 0.00 0.00 29.00 3.85
2568 2738 9.804758 CTAGTTGGACTAATATCTTCTTTCGTT 57.195 33.333 0.00 0.00 29.00 3.85
2569 2739 8.480643 AGTTGGACTAATATCTTCTTTCGTTG 57.519 34.615 0.00 0.00 0.00 4.10
2570 2740 8.095169 AGTTGGACTAATATCTTCTTTCGTTGT 58.905 33.333 0.00 0.00 0.00 3.32
2571 2741 8.718734 GTTGGACTAATATCTTCTTTCGTTGTT 58.281 33.333 0.00 0.00 0.00 2.83
2572 2742 8.251750 TGGACTAATATCTTCTTTCGTTGTTG 57.748 34.615 0.00 0.00 0.00 3.33
2573 2743 8.092068 TGGACTAATATCTTCTTTCGTTGTTGA 58.908 33.333 0.00 0.00 0.00 3.18
2574 2744 9.099454 GGACTAATATCTTCTTTCGTTGTTGAT 57.901 33.333 0.00 0.00 0.00 2.57
2576 2746 9.877178 ACTAATATCTTCTTTCGTTGTTGATCT 57.123 29.630 0.00 0.00 0.00 2.75
2578 2748 8.553459 AATATCTTCTTTCGTTGTTGATCTGT 57.447 30.769 0.00 0.00 0.00 3.41
2579 2749 5.657470 TCTTCTTTCGTTGTTGATCTGTG 57.343 39.130 0.00 0.00 0.00 3.66
2580 2750 4.511454 TCTTCTTTCGTTGTTGATCTGTGG 59.489 41.667 0.00 0.00 0.00 4.17
2581 2751 4.066646 TCTTTCGTTGTTGATCTGTGGA 57.933 40.909 0.00 0.00 0.00 4.02
2582 2752 4.641396 TCTTTCGTTGTTGATCTGTGGAT 58.359 39.130 0.00 0.00 34.45 3.41
2583 2753 5.063204 TCTTTCGTTGTTGATCTGTGGATT 58.937 37.500 0.00 0.00 31.46 3.01
2584 2754 5.179368 TCTTTCGTTGTTGATCTGTGGATTC 59.821 40.000 0.00 0.00 31.46 2.52
2585 2755 4.271696 TCGTTGTTGATCTGTGGATTCT 57.728 40.909 0.00 0.00 31.46 2.40
2586 2756 4.641396 TCGTTGTTGATCTGTGGATTCTT 58.359 39.130 0.00 0.00 31.46 2.52
2587 2757 4.452114 TCGTTGTTGATCTGTGGATTCTTG 59.548 41.667 0.00 0.00 31.46 3.02
2588 2758 4.452114 CGTTGTTGATCTGTGGATTCTTGA 59.548 41.667 0.00 0.00 31.46 3.02
2589 2759 5.122869 CGTTGTTGATCTGTGGATTCTTGAT 59.877 40.000 0.00 0.00 31.46 2.57
2590 2760 6.348786 CGTTGTTGATCTGTGGATTCTTGATT 60.349 38.462 0.00 0.00 31.46 2.57
2591 2761 7.373493 GTTGTTGATCTGTGGATTCTTGATTT 58.627 34.615 0.00 0.00 31.46 2.17
2592 2762 7.528996 TGTTGATCTGTGGATTCTTGATTTT 57.471 32.000 0.00 0.00 31.46 1.82
2593 2763 7.372714 TGTTGATCTGTGGATTCTTGATTTTG 58.627 34.615 0.00 0.00 31.46 2.44
2594 2764 5.957798 TGATCTGTGGATTCTTGATTTTGC 58.042 37.500 0.00 0.00 31.46 3.68
2595 2765 5.477637 TGATCTGTGGATTCTTGATTTTGCA 59.522 36.000 0.00 0.00 31.46 4.08
2596 2766 5.988310 TCTGTGGATTCTTGATTTTGCAT 57.012 34.783 0.00 0.00 0.00 3.96
2597 2767 6.349243 TCTGTGGATTCTTGATTTTGCATT 57.651 33.333 0.00 0.00 0.00 3.56
2598 2768 6.392354 TCTGTGGATTCTTGATTTTGCATTC 58.608 36.000 0.00 0.00 0.00 2.67
2599 2769 6.209986 TCTGTGGATTCTTGATTTTGCATTCT 59.790 34.615 0.00 0.00 0.00 2.40
2600 2770 6.761312 TGTGGATTCTTGATTTTGCATTCTT 58.239 32.000 0.00 0.00 0.00 2.52
2601 2771 6.869913 TGTGGATTCTTGATTTTGCATTCTTC 59.130 34.615 0.00 0.00 0.00 2.87
2602 2772 7.095270 GTGGATTCTTGATTTTGCATTCTTCT 58.905 34.615 0.00 0.00 0.00 2.85
2603 2773 7.601508 GTGGATTCTTGATTTTGCATTCTTCTT 59.398 33.333 0.00 0.00 0.00 2.52
2604 2774 8.152246 TGGATTCTTGATTTTGCATTCTTCTTT 58.848 29.630 0.00 0.00 0.00 2.52
2605 2775 8.996271 GGATTCTTGATTTTGCATTCTTCTTTT 58.004 29.630 0.00 0.00 0.00 2.27
2622 2792 3.997672 TTTTTGATTGCGGGTTGGG 57.002 47.368 0.00 0.00 0.00 4.12
2623 2793 0.394565 TTTTTGATTGCGGGTTGGGG 59.605 50.000 0.00 0.00 0.00 4.96
2624 2794 0.760945 TTTTGATTGCGGGTTGGGGT 60.761 50.000 0.00 0.00 0.00 4.95
2625 2795 0.760945 TTTGATTGCGGGTTGGGGTT 60.761 50.000 0.00 0.00 0.00 4.11
2626 2796 1.467678 TTGATTGCGGGTTGGGGTTG 61.468 55.000 0.00 0.00 0.00 3.77
2627 2797 3.295304 GATTGCGGGTTGGGGTTGC 62.295 63.158 0.00 0.00 0.00 4.17
2661 2831 3.710722 CAGCTCCTTCCGGCCTGT 61.711 66.667 0.00 0.00 0.00 4.00
2662 2832 2.038975 AGCTCCTTCCGGCCTGTA 59.961 61.111 0.00 0.00 0.00 2.74
2663 2833 1.612442 AGCTCCTTCCGGCCTGTAA 60.612 57.895 0.00 0.00 0.00 2.41
2664 2834 1.198759 AGCTCCTTCCGGCCTGTAAA 61.199 55.000 0.00 0.00 0.00 2.01
2665 2835 0.322187 GCTCCTTCCGGCCTGTAAAA 60.322 55.000 0.00 0.00 0.00 1.52
2666 2836 1.450025 CTCCTTCCGGCCTGTAAAAC 58.550 55.000 0.00 0.00 0.00 2.43
2667 2837 1.003233 CTCCTTCCGGCCTGTAAAACT 59.997 52.381 0.00 0.00 0.00 2.66
2668 2838 1.422402 TCCTTCCGGCCTGTAAAACTT 59.578 47.619 0.00 0.00 0.00 2.66
2669 2839 2.638855 TCCTTCCGGCCTGTAAAACTTA 59.361 45.455 0.00 0.00 0.00 2.24
2670 2840 3.072768 TCCTTCCGGCCTGTAAAACTTAA 59.927 43.478 0.00 0.00 0.00 1.85
2671 2841 3.822167 CCTTCCGGCCTGTAAAACTTAAA 59.178 43.478 0.00 0.00 0.00 1.52
2672 2842 4.461431 CCTTCCGGCCTGTAAAACTTAAAT 59.539 41.667 0.00 0.00 0.00 1.40
2673 2843 5.047590 CCTTCCGGCCTGTAAAACTTAAATT 60.048 40.000 0.00 0.00 0.00 1.82
2674 2844 6.408107 TTCCGGCCTGTAAAACTTAAATTT 57.592 33.333 0.00 0.00 0.00 1.82
2675 2845 7.309316 CCTTCCGGCCTGTAAAACTTAAATTTA 60.309 37.037 0.00 0.00 0.00 1.40
2676 2846 6.912082 TCCGGCCTGTAAAACTTAAATTTAC 58.088 36.000 0.00 13.06 41.45 2.01
2677 2847 6.489361 TCCGGCCTGTAAAACTTAAATTTACA 59.511 34.615 18.17 18.17 45.84 2.41
2678 2848 7.014038 TCCGGCCTGTAAAACTTAAATTTACAA 59.986 33.333 19.07 7.76 46.69 2.41
2679 2849 7.115236 CCGGCCTGTAAAACTTAAATTTACAAC 59.885 37.037 19.07 15.52 46.69 3.32
2680 2850 7.863877 CGGCCTGTAAAACTTAAATTTACAACT 59.136 33.333 19.07 0.00 46.69 3.16
2681 2851 9.537192 GGCCTGTAAAACTTAAATTTACAACTT 57.463 29.630 19.07 0.00 46.69 2.66
2701 2871 9.090692 ACAACTTAATTTGATCTTGCATATTGC 57.909 29.630 12.06 0.00 45.29 3.56
2755 2925 9.807649 ATACAAAAGATATCACCAAATCTTTGC 57.192 29.630 5.32 0.00 46.59 3.68
2756 2926 7.899973 ACAAAAGATATCACCAAATCTTTGCT 58.100 30.769 5.32 0.00 46.59 3.91
2757 2927 9.023962 ACAAAAGATATCACCAAATCTTTGCTA 57.976 29.630 5.32 0.00 46.59 3.49
2758 2928 9.512435 CAAAAGATATCACCAAATCTTTGCTAG 57.488 33.333 5.32 0.00 46.59 3.42
2759 2929 9.466497 AAAAGATATCACCAAATCTTTGCTAGA 57.534 29.630 5.32 0.00 46.59 2.43
2760 2930 9.466497 AAAGATATCACCAAATCTTTGCTAGAA 57.534 29.630 5.32 0.00 45.91 2.10
2761 2931 9.638176 AAGATATCACCAAATCTTTGCTAGAAT 57.362 29.630 5.32 0.00 38.93 2.40
2781 2951 7.672983 AGAATAGCAAGATCAAAGAAAACGA 57.327 32.000 0.00 0.00 0.00 3.85
2782 2952 7.746929 AGAATAGCAAGATCAAAGAAAACGAG 58.253 34.615 0.00 0.00 0.00 4.18
2783 2953 7.604164 AGAATAGCAAGATCAAAGAAAACGAGA 59.396 33.333 0.00 0.00 0.00 4.04
2784 2954 7.672983 ATAGCAAGATCAAAGAAAACGAGAA 57.327 32.000 0.00 0.00 0.00 2.87
2785 2955 5.752712 AGCAAGATCAAAGAAAACGAGAAC 58.247 37.500 0.00 0.00 0.00 3.01
2786 2956 5.529060 AGCAAGATCAAAGAAAACGAGAACT 59.471 36.000 0.00 0.00 0.00 3.01
2787 2957 6.706270 AGCAAGATCAAAGAAAACGAGAACTA 59.294 34.615 0.00 0.00 0.00 2.24
2788 2958 6.792726 GCAAGATCAAAGAAAACGAGAACTAC 59.207 38.462 0.00 0.00 0.00 2.73
2789 2959 7.518370 GCAAGATCAAAGAAAACGAGAACTACA 60.518 37.037 0.00 0.00 0.00 2.74
2790 2960 8.335356 CAAGATCAAAGAAAACGAGAACTACAA 58.665 33.333 0.00 0.00 0.00 2.41
2791 2961 8.077836 AGATCAAAGAAAACGAGAACTACAAG 57.922 34.615 0.00 0.00 0.00 3.16
2792 2962 7.711339 AGATCAAAGAAAACGAGAACTACAAGT 59.289 33.333 0.00 0.00 0.00 3.16
2793 2963 7.605410 TCAAAGAAAACGAGAACTACAAGTT 57.395 32.000 0.00 0.00 41.95 2.66
2794 2964 8.036273 TCAAAGAAAACGAGAACTACAAGTTT 57.964 30.769 0.00 0.00 38.80 2.66
2795 2965 7.960738 TCAAAGAAAACGAGAACTACAAGTTTG 59.039 33.333 0.00 0.00 38.80 2.93
2796 2966 6.980051 AGAAAACGAGAACTACAAGTTTGT 57.020 33.333 2.75 2.75 38.80 2.83
2797 2967 8.483307 AAGAAAACGAGAACTACAAGTTTGTA 57.517 30.769 4.78 4.78 38.80 2.41
2798 2968 8.658499 AGAAAACGAGAACTACAAGTTTGTAT 57.342 30.769 5.27 0.00 42.26 2.29
2799 2969 9.106070 AGAAAACGAGAACTACAAGTTTGTATT 57.894 29.630 5.27 0.00 42.26 1.89
2800 2970 9.712359 GAAAACGAGAACTACAAGTTTGTATTT 57.288 29.630 5.27 6.30 42.26 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1982 2152 9.487790 GCAAGAGCAGTTCTATATCTTATCTTT 57.512 33.333 0.00 0.00 41.58 2.52
2001 2171 0.796312 TCGACGGATTTTGCAAGAGC 59.204 50.000 0.00 0.00 42.57 4.09
2002 2172 2.223144 TGTTCGACGGATTTTGCAAGAG 59.777 45.455 0.00 0.00 0.00 2.85
2003 2173 2.032377 GTGTTCGACGGATTTTGCAAGA 60.032 45.455 0.00 0.00 0.00 3.02
2004 2174 2.286713 TGTGTTCGACGGATTTTGCAAG 60.287 45.455 0.00 0.00 0.00 4.01
2005 2175 1.671328 TGTGTTCGACGGATTTTGCAA 59.329 42.857 0.00 0.00 0.00 4.08
2006 2176 1.300481 TGTGTTCGACGGATTTTGCA 58.700 45.000 0.00 0.00 0.00 4.08
2007 2177 2.392933 TTGTGTTCGACGGATTTTGC 57.607 45.000 0.00 0.00 0.00 3.68
2008 2178 5.922546 TCTATTTGTGTTCGACGGATTTTG 58.077 37.500 0.00 0.00 0.00 2.44
2009 2179 5.929992 TCTCTATTTGTGTTCGACGGATTTT 59.070 36.000 0.00 0.00 0.00 1.82
2010 2180 5.347907 GTCTCTATTTGTGTTCGACGGATTT 59.652 40.000 0.00 0.00 0.00 2.17
2011 2181 4.863131 GTCTCTATTTGTGTTCGACGGATT 59.137 41.667 0.00 0.00 0.00 3.01
2012 2182 4.421948 GTCTCTATTTGTGTTCGACGGAT 58.578 43.478 0.00 0.00 0.00 4.18
2013 2183 3.668757 CGTCTCTATTTGTGTTCGACGGA 60.669 47.826 0.00 0.00 39.08 4.69
2014 2184 2.592897 CGTCTCTATTTGTGTTCGACGG 59.407 50.000 0.00 0.00 39.08 4.79
2015 2185 2.026507 GCGTCTCTATTTGTGTTCGACG 59.973 50.000 0.00 0.00 43.75 5.12
2016 2186 3.243336 AGCGTCTCTATTTGTGTTCGAC 58.757 45.455 0.00 0.00 0.00 4.20
2017 2187 3.570926 AGCGTCTCTATTTGTGTTCGA 57.429 42.857 0.00 0.00 0.00 3.71
2018 2188 4.647291 AAAGCGTCTCTATTTGTGTTCG 57.353 40.909 0.00 0.00 0.00 3.95
2019 2189 6.586844 ACTCTAAAGCGTCTCTATTTGTGTTC 59.413 38.462 0.00 0.00 0.00 3.18
2020 2190 6.366332 CACTCTAAAGCGTCTCTATTTGTGTT 59.634 38.462 0.00 0.00 0.00 3.32
2021 2191 5.864474 CACTCTAAAGCGTCTCTATTTGTGT 59.136 40.000 0.00 0.00 0.00 3.72
2022 2192 6.093404 TCACTCTAAAGCGTCTCTATTTGTG 58.907 40.000 0.00 0.00 0.00 3.33
2023 2193 6.268825 TCACTCTAAAGCGTCTCTATTTGT 57.731 37.500 0.00 0.00 0.00 2.83
2024 2194 7.582435 TTTCACTCTAAAGCGTCTCTATTTG 57.418 36.000 0.00 0.00 0.00 2.32
2025 2195 8.779354 AATTTCACTCTAAAGCGTCTCTATTT 57.221 30.769 0.00 0.00 0.00 1.40
2026 2196 8.254508 AGAATTTCACTCTAAAGCGTCTCTATT 58.745 33.333 0.00 0.00 0.00 1.73
2027 2197 7.777095 AGAATTTCACTCTAAAGCGTCTCTAT 58.223 34.615 0.00 0.00 0.00 1.98
2028 2198 7.159322 AGAATTTCACTCTAAAGCGTCTCTA 57.841 36.000 0.00 0.00 0.00 2.43
2029 2199 6.031751 AGAATTTCACTCTAAAGCGTCTCT 57.968 37.500 0.00 0.00 0.00 3.10
2030 2200 7.995463 ATAGAATTTCACTCTAAAGCGTCTC 57.005 36.000 0.00 0.00 0.00 3.36
2031 2201 8.035394 TGAATAGAATTTCACTCTAAAGCGTCT 58.965 33.333 0.00 0.00 30.82 4.18
2032 2202 8.186178 TGAATAGAATTTCACTCTAAAGCGTC 57.814 34.615 0.00 0.00 30.82 5.19
2033 2203 8.723942 ATGAATAGAATTTCACTCTAAAGCGT 57.276 30.769 0.00 0.00 38.37 5.07
2034 2204 8.279103 GGATGAATAGAATTTCACTCTAAAGCG 58.721 37.037 0.00 0.00 38.37 4.68
2035 2205 8.563732 GGGATGAATAGAATTTCACTCTAAAGC 58.436 37.037 0.00 0.00 38.37 3.51
2036 2206 9.618890 TGGGATGAATAGAATTTCACTCTAAAG 57.381 33.333 0.00 0.00 38.37 1.85
2037 2207 9.618890 CTGGGATGAATAGAATTTCACTCTAAA 57.381 33.333 0.00 0.00 38.37 1.85
2038 2208 8.992349 TCTGGGATGAATAGAATTTCACTCTAA 58.008 33.333 0.00 0.00 38.37 2.10
2039 2209 8.553085 TCTGGGATGAATAGAATTTCACTCTA 57.447 34.615 0.00 0.00 38.37 2.43
2040 2210 7.443302 TCTGGGATGAATAGAATTTCACTCT 57.557 36.000 0.00 0.00 38.37 3.24
2041 2211 8.688747 AATCTGGGATGAATAGAATTTCACTC 57.311 34.615 0.00 0.00 38.37 3.51
2042 2212 9.566432 GTAATCTGGGATGAATAGAATTTCACT 57.434 33.333 0.00 0.00 38.37 3.41
2043 2213 9.342308 TGTAATCTGGGATGAATAGAATTTCAC 57.658 33.333 0.00 0.00 38.37 3.18
2044 2214 9.342308 GTGTAATCTGGGATGAATAGAATTTCA 57.658 33.333 0.00 0.00 39.77 2.69
2045 2215 8.787852 GGTGTAATCTGGGATGAATAGAATTTC 58.212 37.037 0.00 0.00 0.00 2.17
2046 2216 8.506083 AGGTGTAATCTGGGATGAATAGAATTT 58.494 33.333 0.00 0.00 0.00 1.82
2047 2217 8.050316 AGGTGTAATCTGGGATGAATAGAATT 57.950 34.615 0.00 0.00 0.00 2.17
2048 2218 7.639062 AGGTGTAATCTGGGATGAATAGAAT 57.361 36.000 0.00 0.00 0.00 2.40
2049 2219 8.597167 CATAGGTGTAATCTGGGATGAATAGAA 58.403 37.037 0.00 0.00 0.00 2.10
2050 2220 7.734865 ACATAGGTGTAATCTGGGATGAATAGA 59.265 37.037 0.00 0.00 36.63 1.98
2051 2221 7.911651 ACATAGGTGTAATCTGGGATGAATAG 58.088 38.462 0.00 0.00 36.63 1.73
2052 2222 7.512402 TGACATAGGTGTAATCTGGGATGAATA 59.488 37.037 0.00 0.00 39.09 1.75
2053 2223 6.329986 TGACATAGGTGTAATCTGGGATGAAT 59.670 38.462 0.00 0.00 39.09 2.57
2054 2224 5.665360 TGACATAGGTGTAATCTGGGATGAA 59.335 40.000 0.00 0.00 39.09 2.57
2055 2225 5.070446 GTGACATAGGTGTAATCTGGGATGA 59.930 44.000 0.00 0.00 39.09 2.92
2056 2226 5.300752 GTGACATAGGTGTAATCTGGGATG 58.699 45.833 0.00 0.00 39.09 3.51
2057 2227 4.039245 CGTGACATAGGTGTAATCTGGGAT 59.961 45.833 0.00 0.00 39.09 3.85
2058 2228 3.383505 CGTGACATAGGTGTAATCTGGGA 59.616 47.826 0.00 0.00 39.09 4.37
2059 2229 3.132289 ACGTGACATAGGTGTAATCTGGG 59.868 47.826 0.00 0.00 39.09 4.45
2060 2230 4.112634 CACGTGACATAGGTGTAATCTGG 58.887 47.826 10.90 0.00 39.09 3.86
2069 2239 2.875933 CAAAACCACACGTGACATAGGT 59.124 45.455 25.01 17.41 0.00 3.08
2070 2240 2.350388 GCAAAACCACACGTGACATAGG 60.350 50.000 25.01 16.78 0.00 2.57
2071 2241 2.289274 TGCAAAACCACACGTGACATAG 59.711 45.455 25.01 7.96 0.00 2.23
2072 2242 2.289565 TGCAAAACCACACGTGACATA 58.710 42.857 25.01 0.00 0.00 2.29
2073 2243 1.098869 TGCAAAACCACACGTGACAT 58.901 45.000 25.01 3.20 0.00 3.06
2074 2244 1.098869 ATGCAAAACCACACGTGACA 58.901 45.000 25.01 7.10 0.00 3.58
2075 2245 2.116366 GAATGCAAAACCACACGTGAC 58.884 47.619 25.01 1.41 0.00 3.67
2076 2246 1.066303 GGAATGCAAAACCACACGTGA 59.934 47.619 25.01 0.00 0.00 4.35
2077 2247 1.066908 AGGAATGCAAAACCACACGTG 59.933 47.619 15.48 15.48 0.00 4.49
2078 2248 1.398692 AGGAATGCAAAACCACACGT 58.601 45.000 0.00 0.00 0.00 4.49
2079 2249 2.126467 CAAGGAATGCAAAACCACACG 58.874 47.619 0.00 0.00 0.00 4.49
2080 2250 3.451141 TCAAGGAATGCAAAACCACAC 57.549 42.857 0.00 0.00 0.00 3.82
2081 2251 3.703556 TCTTCAAGGAATGCAAAACCACA 59.296 39.130 0.00 0.00 0.00 4.17
2082 2252 4.051237 GTCTTCAAGGAATGCAAAACCAC 58.949 43.478 0.00 0.00 0.00 4.16
2083 2253 3.703556 TGTCTTCAAGGAATGCAAAACCA 59.296 39.130 0.00 0.00 0.00 3.67
2084 2254 4.051237 GTGTCTTCAAGGAATGCAAAACC 58.949 43.478 0.00 0.00 0.00 3.27
2085 2255 3.730715 CGTGTCTTCAAGGAATGCAAAAC 59.269 43.478 0.00 0.00 0.00 2.43
2086 2256 3.629855 TCGTGTCTTCAAGGAATGCAAAA 59.370 39.130 0.00 0.00 0.00 2.44
2087 2257 3.210227 TCGTGTCTTCAAGGAATGCAAA 58.790 40.909 0.00 0.00 0.00 3.68
2088 2258 2.807967 CTCGTGTCTTCAAGGAATGCAA 59.192 45.455 0.00 0.00 0.00 4.08
2089 2259 2.224281 ACTCGTGTCTTCAAGGAATGCA 60.224 45.455 0.00 0.00 0.00 3.96
2090 2260 2.413453 GACTCGTGTCTTCAAGGAATGC 59.587 50.000 10.29 0.00 39.94 3.56
2091 2261 2.996621 GGACTCGTGTCTTCAAGGAATG 59.003 50.000 16.45 0.00 42.54 2.67
2092 2262 2.632996 TGGACTCGTGTCTTCAAGGAAT 59.367 45.455 16.45 0.00 42.54 3.01
2093 2263 2.036387 TGGACTCGTGTCTTCAAGGAA 58.964 47.619 16.45 0.00 42.54 3.36
2094 2264 1.699730 TGGACTCGTGTCTTCAAGGA 58.300 50.000 16.45 0.00 42.54 3.36
2095 2265 2.232452 AGATGGACTCGTGTCTTCAAGG 59.768 50.000 16.45 0.00 42.54 3.61
2096 2266 3.249091 CAGATGGACTCGTGTCTTCAAG 58.751 50.000 16.45 7.88 42.54 3.02
2097 2267 2.610479 GCAGATGGACTCGTGTCTTCAA 60.610 50.000 16.45 2.24 42.54 2.69
2098 2268 1.067565 GCAGATGGACTCGTGTCTTCA 60.068 52.381 16.45 8.09 42.54 3.02
2099 2269 1.203523 AGCAGATGGACTCGTGTCTTC 59.796 52.381 16.45 13.28 42.54 2.87
2100 2270 1.203523 GAGCAGATGGACTCGTGTCTT 59.796 52.381 16.45 5.59 42.54 3.01
2101 2271 0.814457 GAGCAGATGGACTCGTGTCT 59.186 55.000 16.45 0.00 42.54 3.41
2102 2272 0.814457 AGAGCAGATGGACTCGTGTC 59.186 55.000 9.11 9.11 42.22 3.67
2103 2273 1.261480 AAGAGCAGATGGACTCGTGT 58.739 50.000 0.00 0.00 37.99 4.49
2104 2274 3.724508 ATAAGAGCAGATGGACTCGTG 57.275 47.619 0.00 0.00 37.99 4.35
2105 2275 3.957497 AGAATAAGAGCAGATGGACTCGT 59.043 43.478 0.00 0.00 37.99 4.18
2106 2276 4.582701 AGAATAAGAGCAGATGGACTCG 57.417 45.455 0.00 0.00 37.99 4.18
2107 2277 7.096551 GGAATAGAATAAGAGCAGATGGACTC 58.903 42.308 0.00 0.00 0.00 3.36
2108 2278 6.295011 CGGAATAGAATAAGAGCAGATGGACT 60.295 42.308 0.00 0.00 0.00 3.85
2109 2279 5.866633 CGGAATAGAATAAGAGCAGATGGAC 59.133 44.000 0.00 0.00 0.00 4.02
2110 2280 5.540337 ACGGAATAGAATAAGAGCAGATGGA 59.460 40.000 0.00 0.00 0.00 3.41
2111 2281 5.788450 ACGGAATAGAATAAGAGCAGATGG 58.212 41.667 0.00 0.00 0.00 3.51
2112 2282 6.703607 ACAACGGAATAGAATAAGAGCAGATG 59.296 38.462 0.00 0.00 0.00 2.90
2113 2283 6.821388 ACAACGGAATAGAATAAGAGCAGAT 58.179 36.000 0.00 0.00 0.00 2.90
2114 2284 6.127451 TGACAACGGAATAGAATAAGAGCAGA 60.127 38.462 0.00 0.00 0.00 4.26
2115 2285 6.042777 TGACAACGGAATAGAATAAGAGCAG 58.957 40.000 0.00 0.00 0.00 4.24
2116 2286 5.972935 TGACAACGGAATAGAATAAGAGCA 58.027 37.500 0.00 0.00 0.00 4.26
2117 2287 6.903883 TTGACAACGGAATAGAATAAGAGC 57.096 37.500 0.00 0.00 0.00 4.09
2118 2288 8.759641 CAGATTGACAACGGAATAGAATAAGAG 58.240 37.037 0.00 0.00 0.00 2.85
2119 2289 7.224753 GCAGATTGACAACGGAATAGAATAAGA 59.775 37.037 0.00 0.00 0.00 2.10
2120 2290 7.011389 TGCAGATTGACAACGGAATAGAATAAG 59.989 37.037 0.00 0.00 0.00 1.73
2121 2291 6.821160 TGCAGATTGACAACGGAATAGAATAA 59.179 34.615 0.00 0.00 0.00 1.40
2122 2292 6.257849 GTGCAGATTGACAACGGAATAGAATA 59.742 38.462 0.00 0.00 0.00 1.75
2123 2293 5.065218 GTGCAGATTGACAACGGAATAGAAT 59.935 40.000 0.00 0.00 0.00 2.40
2124 2294 4.391830 GTGCAGATTGACAACGGAATAGAA 59.608 41.667 0.00 0.00 0.00 2.10
2125 2295 3.932710 GTGCAGATTGACAACGGAATAGA 59.067 43.478 0.00 0.00 0.00 1.98
2126 2296 3.684305 TGTGCAGATTGACAACGGAATAG 59.316 43.478 0.00 0.00 0.00 1.73
2127 2297 3.669536 TGTGCAGATTGACAACGGAATA 58.330 40.909 0.00 0.00 0.00 1.75
2128 2298 2.503331 TGTGCAGATTGACAACGGAAT 58.497 42.857 0.00 0.00 0.00 3.01
2129 2299 1.960417 TGTGCAGATTGACAACGGAA 58.040 45.000 0.00 0.00 0.00 4.30
2130 2300 1.872952 CTTGTGCAGATTGACAACGGA 59.127 47.619 0.00 0.00 0.00 4.69
2131 2301 1.664016 GCTTGTGCAGATTGACAACGG 60.664 52.381 0.00 0.00 39.41 4.44
2132 2302 1.002576 TGCTTGTGCAGATTGACAACG 60.003 47.619 0.00 0.00 45.31 4.10
2133 2303 2.780065 TGCTTGTGCAGATTGACAAC 57.220 45.000 0.00 0.00 45.31 3.32
2144 2314 2.095567 CACAGGTCTAACATGCTTGTGC 60.096 50.000 5.94 0.00 35.83 4.57
2145 2315 3.141398 ACACAGGTCTAACATGCTTGTG 58.859 45.455 5.94 9.81 40.05 3.33
2146 2316 3.492102 ACACAGGTCTAACATGCTTGT 57.508 42.857 0.00 0.00 32.34 3.16
2147 2317 7.041721 TCTAATACACAGGTCTAACATGCTTG 58.958 38.462 0.00 0.00 32.34 4.01
2148 2318 7.182817 TCTAATACACAGGTCTAACATGCTT 57.817 36.000 0.00 0.00 32.34 3.91
2149 2319 6.684111 GCTCTAATACACAGGTCTAACATGCT 60.684 42.308 0.00 0.00 32.34 3.79
2150 2320 5.463724 GCTCTAATACACAGGTCTAACATGC 59.536 44.000 0.00 0.00 32.34 4.06
2151 2321 6.573434 TGCTCTAATACACAGGTCTAACATG 58.427 40.000 0.00 0.00 35.77 3.21
2152 2322 6.791867 TGCTCTAATACACAGGTCTAACAT 57.208 37.500 0.00 0.00 0.00 2.71
2153 2323 6.210784 AGTTGCTCTAATACACAGGTCTAACA 59.789 38.462 0.00 0.00 0.00 2.41
2154 2324 6.631962 AGTTGCTCTAATACACAGGTCTAAC 58.368 40.000 0.00 0.00 0.00 2.34
2155 2325 6.663953 AGAGTTGCTCTAATACACAGGTCTAA 59.336 38.462 0.00 0.00 39.28 2.10
2156 2326 6.188407 AGAGTTGCTCTAATACACAGGTCTA 58.812 40.000 0.00 0.00 39.28 2.59
2157 2327 5.020132 AGAGTTGCTCTAATACACAGGTCT 58.980 41.667 0.00 0.00 39.28 3.85
2158 2328 5.331876 AGAGTTGCTCTAATACACAGGTC 57.668 43.478 0.00 0.00 39.28 3.85
2159 2329 6.852420 TTAGAGTTGCTCTAATACACAGGT 57.148 37.500 12.89 0.00 44.85 4.00
2168 2338 3.514309 GGGGTCTGTTAGAGTTGCTCTAA 59.486 47.826 12.89 12.89 46.70 2.10
2169 2339 3.097614 GGGGTCTGTTAGAGTTGCTCTA 58.902 50.000 2.07 2.07 41.50 2.43
2170 2340 1.903183 GGGGTCTGTTAGAGTTGCTCT 59.097 52.381 4.02 4.02 43.83 4.09
2171 2341 1.404315 CGGGGTCTGTTAGAGTTGCTC 60.404 57.143 0.00 0.00 0.00 4.26
2172 2342 0.608640 CGGGGTCTGTTAGAGTTGCT 59.391 55.000 0.00 0.00 0.00 3.91
2173 2343 1.019805 GCGGGGTCTGTTAGAGTTGC 61.020 60.000 0.00 0.00 0.00 4.17
2174 2344 0.320374 TGCGGGGTCTGTTAGAGTTG 59.680 55.000 0.00 0.00 0.00 3.16
2175 2345 1.207329 GATGCGGGGTCTGTTAGAGTT 59.793 52.381 0.00 0.00 0.00 3.01
2176 2346 0.824759 GATGCGGGGTCTGTTAGAGT 59.175 55.000 0.00 0.00 0.00 3.24
2177 2347 0.105039 GGATGCGGGGTCTGTTAGAG 59.895 60.000 0.00 0.00 0.00 2.43
2178 2348 0.325296 AGGATGCGGGGTCTGTTAGA 60.325 55.000 0.00 0.00 0.00 2.10
2179 2349 0.541863 AAGGATGCGGGGTCTGTTAG 59.458 55.000 0.00 0.00 0.00 2.34
2180 2350 0.539986 GAAGGATGCGGGGTCTGTTA 59.460 55.000 0.00 0.00 0.00 2.41
2181 2351 1.299976 GAAGGATGCGGGGTCTGTT 59.700 57.895 0.00 0.00 0.00 3.16
2182 2352 2.670148 GGAAGGATGCGGGGTCTGT 61.670 63.158 0.00 0.00 0.00 3.41
2183 2353 2.190578 GGAAGGATGCGGGGTCTG 59.809 66.667 0.00 0.00 0.00 3.51
2184 2354 1.923395 TTGGAAGGATGCGGGGTCT 60.923 57.895 0.00 0.00 0.00 3.85
2185 2355 1.749258 GTTGGAAGGATGCGGGGTC 60.749 63.158 0.00 0.00 0.00 4.46
2186 2356 2.355115 GTTGGAAGGATGCGGGGT 59.645 61.111 0.00 0.00 0.00 4.95
2187 2357 2.440247 GGTTGGAAGGATGCGGGG 60.440 66.667 0.00 0.00 0.00 5.73
2188 2358 2.440247 GGGTTGGAAGGATGCGGG 60.440 66.667 0.00 0.00 0.00 6.13
2189 2359 2.824041 CGGGTTGGAAGGATGCGG 60.824 66.667 0.00 0.00 0.00 5.69
2190 2360 3.508840 GCGGGTTGGAAGGATGCG 61.509 66.667 0.00 0.00 0.00 4.73
2191 2361 1.531739 TTTGCGGGTTGGAAGGATGC 61.532 55.000 0.00 0.00 0.00 3.91
2192 2362 0.965439 TTTTGCGGGTTGGAAGGATG 59.035 50.000 0.00 0.00 0.00 3.51
2193 2363 0.966179 GTTTTGCGGGTTGGAAGGAT 59.034 50.000 0.00 0.00 0.00 3.24
2194 2364 0.395862 TGTTTTGCGGGTTGGAAGGA 60.396 50.000 0.00 0.00 0.00 3.36
2195 2365 0.678950 ATGTTTTGCGGGTTGGAAGG 59.321 50.000 0.00 0.00 0.00 3.46
2196 2366 2.524569 AATGTTTTGCGGGTTGGAAG 57.475 45.000 0.00 0.00 0.00 3.46
2197 2367 2.990066 AAATGTTTTGCGGGTTGGAA 57.010 40.000 0.00 0.00 0.00 3.53
2198 2368 2.939103 CAAAAATGTTTTGCGGGTTGGA 59.061 40.909 0.85 0.00 0.00 3.53
2199 2369 2.540565 GCAAAAATGTTTTGCGGGTTGG 60.541 45.455 19.27 0.00 44.13 3.77
2200 2370 2.714139 GCAAAAATGTTTTGCGGGTTG 58.286 42.857 19.27 1.80 44.13 3.77
2207 2377 2.347476 CGCGACCTGCAAAAATGTTTTG 60.347 45.455 0.00 8.72 46.97 2.44
2208 2378 1.857837 CGCGACCTGCAAAAATGTTTT 59.142 42.857 0.00 0.00 46.97 2.43
2209 2379 1.486439 CGCGACCTGCAAAAATGTTT 58.514 45.000 0.00 0.00 46.97 2.83
2210 2380 0.318614 CCGCGACCTGCAAAAATGTT 60.319 50.000 8.23 0.00 46.97 2.71
2211 2381 1.169661 TCCGCGACCTGCAAAAATGT 61.170 50.000 8.23 0.00 46.97 2.71
2212 2382 0.039617 TTCCGCGACCTGCAAAAATG 60.040 50.000 8.23 0.00 46.97 2.32
2213 2383 0.671251 TTTCCGCGACCTGCAAAAAT 59.329 45.000 8.23 0.00 46.97 1.82
2214 2384 0.456221 TTTTCCGCGACCTGCAAAAA 59.544 45.000 8.23 0.00 46.97 1.94
2215 2385 0.248702 GTTTTCCGCGACCTGCAAAA 60.249 50.000 8.23 0.00 46.97 2.44
2216 2386 1.357334 GTTTTCCGCGACCTGCAAA 59.643 52.632 8.23 0.00 46.97 3.68
2217 2387 2.887889 CGTTTTCCGCGACCTGCAA 61.888 57.895 8.23 0.00 46.97 4.08
2218 2388 3.342627 CGTTTTCCGCGACCTGCA 61.343 61.111 8.23 0.00 46.97 4.41
2254 2424 4.865761 TCTGCATACGCGGCCGTC 62.866 66.667 28.70 18.03 46.39 4.79
2267 2437 1.608283 GGTCTATTATGCGGGGTCTGC 60.608 57.143 0.00 0.00 0.00 4.26
2268 2438 1.002087 GGGTCTATTATGCGGGGTCTG 59.998 57.143 0.00 0.00 0.00 3.51
2269 2439 1.349067 GGGTCTATTATGCGGGGTCT 58.651 55.000 0.00 0.00 0.00 3.85
2270 2440 0.037605 CGGGTCTATTATGCGGGGTC 60.038 60.000 0.00 0.00 0.00 4.46
2271 2441 0.761702 ACGGGTCTATTATGCGGGGT 60.762 55.000 0.00 0.00 0.00 4.95
2272 2442 1.259609 TACGGGTCTATTATGCGGGG 58.740 55.000 0.00 0.00 0.00 5.73
2273 2443 3.389925 TTTACGGGTCTATTATGCGGG 57.610 47.619 0.00 0.00 0.00 6.13
2317 2487 1.409427 CGCAACCCCAACCTGTAAAAA 59.591 47.619 0.00 0.00 0.00 1.94
2318 2488 1.033574 CGCAACCCCAACCTGTAAAA 58.966 50.000 0.00 0.00 0.00 1.52
2319 2489 0.824182 CCGCAACCCCAACCTGTAAA 60.824 55.000 0.00 0.00 0.00 2.01
2320 2490 1.228306 CCGCAACCCCAACCTGTAA 60.228 57.895 0.00 0.00 0.00 2.41
2321 2491 2.432563 CCGCAACCCCAACCTGTA 59.567 61.111 0.00 0.00 0.00 2.74
2331 2501 4.980805 TGGTCAGACGCCGCAACC 62.981 66.667 0.00 0.00 0.00 3.77
2332 2502 3.414700 CTGGTCAGACGCCGCAAC 61.415 66.667 0.00 0.00 0.00 4.17
2333 2503 4.680237 CCTGGTCAGACGCCGCAA 62.680 66.667 0.00 0.00 0.00 4.85
2340 2510 4.385405 AGCTGCGCCTGGTCAGAC 62.385 66.667 18.02 11.10 32.26 3.51
2341 2511 4.074526 GAGCTGCGCCTGGTCAGA 62.075 66.667 19.87 0.00 32.26 3.27
2344 2514 4.400961 AAGGAGCTGCGCCTGGTC 62.401 66.667 25.68 17.58 33.05 4.02
2345 2515 4.400961 GAAGGAGCTGCGCCTGGT 62.401 66.667 25.68 11.16 33.05 4.00
2351 2521 4.821589 GGGTCGGAAGGAGCTGCG 62.822 72.222 0.00 0.00 42.80 5.18
2352 2522 1.686325 TATGGGTCGGAAGGAGCTGC 61.686 60.000 0.00 0.00 42.80 5.25
2353 2523 0.830648 TTATGGGTCGGAAGGAGCTG 59.169 55.000 0.00 0.00 42.80 4.24
2354 2524 1.580059 TTTATGGGTCGGAAGGAGCT 58.420 50.000 0.00 0.00 42.80 4.09
2355 2525 2.014857 GTTTTATGGGTCGGAAGGAGC 58.985 52.381 0.00 0.00 42.48 4.70
2356 2526 3.629142 AGTTTTATGGGTCGGAAGGAG 57.371 47.619 0.00 0.00 0.00 3.69
2357 2527 5.502089 TTAAGTTTTATGGGTCGGAAGGA 57.498 39.130 0.00 0.00 0.00 3.36
2358 2528 6.769134 ATTTAAGTTTTATGGGTCGGAAGG 57.231 37.500 0.00 0.00 0.00 3.46
2359 2529 9.563898 GTAAATTTAAGTTTTATGGGTCGGAAG 57.436 33.333 0.00 0.00 0.00 3.46
2360 2530 9.075678 TGTAAATTTAAGTTTTATGGGTCGGAA 57.924 29.630 0.00 0.00 0.00 4.30
2361 2531 8.632906 TGTAAATTTAAGTTTTATGGGTCGGA 57.367 30.769 0.00 0.00 0.00 4.55
2362 2532 9.131416 GTTGTAAATTTAAGTTTTATGGGTCGG 57.869 33.333 0.00 0.00 0.00 4.79
2363 2533 9.902196 AGTTGTAAATTTAAGTTTTATGGGTCG 57.098 29.630 0.00 0.00 0.00 4.79
2384 2554 9.090692 GCAATATGCAAGATCAAATTAAGTTGT 57.909 29.630 14.70 3.41 44.26 3.32
2438 2608 9.807649 GCAAAGATTTGGTGATATCTTTTGTAT 57.192 29.630 3.98 0.00 44.52 2.29
2439 2609 9.023962 AGCAAAGATTTGGTGATATCTTTTGTA 57.976 29.630 9.07 0.00 44.52 2.41
2440 2610 7.899973 AGCAAAGATTTGGTGATATCTTTTGT 58.100 30.769 9.07 0.00 44.52 2.83
2441 2611 9.512435 CTAGCAAAGATTTGGTGATATCTTTTG 57.488 33.333 17.74 5.50 44.52 2.44
2442 2612 9.466497 TCTAGCAAAGATTTGGTGATATCTTTT 57.534 29.630 17.74 0.00 44.52 2.27
2443 2613 9.466497 TTCTAGCAAAGATTTGGTGATATCTTT 57.534 29.630 17.74 0.00 46.60 2.52
2464 2634 8.873830 TCGTTTTCTTTGATCTTGCTATTCTAG 58.126 33.333 0.00 0.00 0.00 2.43
2465 2635 8.771920 TCGTTTTCTTTGATCTTGCTATTCTA 57.228 30.769 0.00 0.00 0.00 2.10
2466 2636 7.604164 TCTCGTTTTCTTTGATCTTGCTATTCT 59.396 33.333 0.00 0.00 0.00 2.40
2467 2637 7.743104 TCTCGTTTTCTTTGATCTTGCTATTC 58.257 34.615 0.00 0.00 0.00 1.75
2468 2638 7.672983 TCTCGTTTTCTTTGATCTTGCTATT 57.327 32.000 0.00 0.00 0.00 1.73
2469 2639 7.389053 AGTTCTCGTTTTCTTTGATCTTGCTAT 59.611 33.333 0.00 0.00 0.00 2.97
2470 2640 6.706270 AGTTCTCGTTTTCTTTGATCTTGCTA 59.294 34.615 0.00 0.00 0.00 3.49
2471 2641 5.529060 AGTTCTCGTTTTCTTTGATCTTGCT 59.471 36.000 0.00 0.00 0.00 3.91
2472 2642 5.752712 AGTTCTCGTTTTCTTTGATCTTGC 58.247 37.500 0.00 0.00 0.00 4.01
2473 2643 7.851508 TGTAGTTCTCGTTTTCTTTGATCTTG 58.148 34.615 0.00 0.00 0.00 3.02
2474 2644 8.433421 TTGTAGTTCTCGTTTTCTTTGATCTT 57.567 30.769 0.00 0.00 0.00 2.40
2475 2645 7.711339 ACTTGTAGTTCTCGTTTTCTTTGATCT 59.289 33.333 0.00 0.00 0.00 2.75
2476 2646 7.852516 ACTTGTAGTTCTCGTTTTCTTTGATC 58.147 34.615 0.00 0.00 0.00 2.92
2477 2647 7.787725 ACTTGTAGTTCTCGTTTTCTTTGAT 57.212 32.000 0.00 0.00 0.00 2.57
2478 2648 7.605410 AACTTGTAGTTCTCGTTTTCTTTGA 57.395 32.000 0.00 0.00 31.77 2.69
2479 2649 7.253321 GCAAACTTGTAGTTCTCGTTTTCTTTG 60.253 37.037 0.00 0.00 37.47 2.77
2480 2650 6.745907 GCAAACTTGTAGTTCTCGTTTTCTTT 59.254 34.615 0.00 0.00 37.47 2.52
2481 2651 6.128117 TGCAAACTTGTAGTTCTCGTTTTCTT 60.128 34.615 0.00 0.00 37.47 2.52
2482 2652 5.353123 TGCAAACTTGTAGTTCTCGTTTTCT 59.647 36.000 0.00 0.00 37.47 2.52
2483 2653 5.565695 TGCAAACTTGTAGTTCTCGTTTTC 58.434 37.500 0.00 0.00 37.47 2.29
2484 2654 5.554822 TGCAAACTTGTAGTTCTCGTTTT 57.445 34.783 0.00 0.00 37.47 2.43
2485 2655 5.751243 ATGCAAACTTGTAGTTCTCGTTT 57.249 34.783 0.00 0.00 37.47 3.60
2486 2656 5.751243 AATGCAAACTTGTAGTTCTCGTT 57.249 34.783 0.00 0.00 37.47 3.85
2487 2657 5.751243 AAATGCAAACTTGTAGTTCTCGT 57.249 34.783 0.00 0.00 37.47 4.18
2488 2658 7.572759 TCTAAAATGCAAACTTGTAGTTCTCG 58.427 34.615 0.00 0.00 37.47 4.04
2489 2659 9.387123 CTTCTAAAATGCAAACTTGTAGTTCTC 57.613 33.333 0.00 0.00 37.47 2.87
2490 2660 9.120538 TCTTCTAAAATGCAAACTTGTAGTTCT 57.879 29.630 0.00 0.00 37.47 3.01
2491 2661 9.899226 ATCTTCTAAAATGCAAACTTGTAGTTC 57.101 29.630 0.00 0.00 37.47 3.01
2495 2665 9.691362 GGAAATCTTCTAAAATGCAAACTTGTA 57.309 29.630 0.00 0.00 0.00 2.41
2496 2666 8.203485 TGGAAATCTTCTAAAATGCAAACTTGT 58.797 29.630 0.00 0.00 0.00 3.16
2497 2667 8.592105 TGGAAATCTTCTAAAATGCAAACTTG 57.408 30.769 0.00 0.00 0.00 3.16
2498 2668 9.783081 ATTGGAAATCTTCTAAAATGCAAACTT 57.217 25.926 0.00 0.00 33.74 2.66
2499 2669 9.783081 AATTGGAAATCTTCTAAAATGCAAACT 57.217 25.926 0.00 0.00 33.74 2.66
2502 2672 9.218440 GGAAATTGGAAATCTTCTAAAATGCAA 57.782 29.630 0.00 0.00 33.74 4.08
2503 2673 8.373981 TGGAAATTGGAAATCTTCTAAAATGCA 58.626 29.630 0.00 0.00 33.74 3.96
2504 2674 8.776376 TGGAAATTGGAAATCTTCTAAAATGC 57.224 30.769 0.00 0.00 33.74 3.56
2510 2680 8.686334 GCAGTTATGGAAATTGGAAATCTTCTA 58.314 33.333 0.00 0.00 0.00 2.10
2511 2681 7.398332 AGCAGTTATGGAAATTGGAAATCTTCT 59.602 33.333 0.00 0.00 0.00 2.85
2512 2682 7.550712 AGCAGTTATGGAAATTGGAAATCTTC 58.449 34.615 0.00 0.00 0.00 2.87
2513 2683 7.364144 GGAGCAGTTATGGAAATTGGAAATCTT 60.364 37.037 0.00 0.00 0.00 2.40
2514 2684 6.097412 GGAGCAGTTATGGAAATTGGAAATCT 59.903 38.462 0.00 0.00 0.00 2.40
2515 2685 6.276091 GGAGCAGTTATGGAAATTGGAAATC 58.724 40.000 0.00 0.00 0.00 2.17
2516 2686 5.129320 GGGAGCAGTTATGGAAATTGGAAAT 59.871 40.000 0.00 0.00 0.00 2.17
2517 2687 4.466015 GGGAGCAGTTATGGAAATTGGAAA 59.534 41.667 0.00 0.00 0.00 3.13
2518 2688 4.023291 GGGAGCAGTTATGGAAATTGGAA 58.977 43.478 0.00 0.00 0.00 3.53
2519 2689 3.011144 TGGGAGCAGTTATGGAAATTGGA 59.989 43.478 0.00 0.00 0.00 3.53
2520 2690 3.131046 GTGGGAGCAGTTATGGAAATTGG 59.869 47.826 0.00 0.00 0.00 3.16
2521 2691 4.019174 AGTGGGAGCAGTTATGGAAATTG 58.981 43.478 0.00 0.00 0.00 2.32
2522 2692 4.322057 AGTGGGAGCAGTTATGGAAATT 57.678 40.909 0.00 0.00 0.00 1.82
2523 2693 4.475016 ACTAGTGGGAGCAGTTATGGAAAT 59.525 41.667 0.00 0.00 0.00 2.17
2524 2694 3.844211 ACTAGTGGGAGCAGTTATGGAAA 59.156 43.478 0.00 0.00 0.00 3.13
2525 2695 3.450904 ACTAGTGGGAGCAGTTATGGAA 58.549 45.455 0.00 0.00 0.00 3.53
2526 2696 3.116096 ACTAGTGGGAGCAGTTATGGA 57.884 47.619 0.00 0.00 0.00 3.41
2527 2697 3.535561 CAACTAGTGGGAGCAGTTATGG 58.464 50.000 0.00 0.00 31.46 2.74
2528 2698 3.535561 CCAACTAGTGGGAGCAGTTATG 58.464 50.000 11.30 0.00 44.64 1.90
2529 2699 3.914426 CCAACTAGTGGGAGCAGTTAT 57.086 47.619 11.30 0.00 44.64 1.89
2540 2710 9.239002 CGAAAGAAGATATTAGTCCAACTAGTG 57.761 37.037 0.00 0.00 31.47 2.74
2541 2711 8.968969 ACGAAAGAAGATATTAGTCCAACTAGT 58.031 33.333 0.00 0.00 31.47 2.57
2542 2712 9.804758 AACGAAAGAAGATATTAGTCCAACTAG 57.195 33.333 0.00 0.00 31.47 2.57
2543 2713 9.582431 CAACGAAAGAAGATATTAGTCCAACTA 57.418 33.333 0.00 0.00 0.00 2.24
2544 2714 8.095169 ACAACGAAAGAAGATATTAGTCCAACT 58.905 33.333 0.00 0.00 0.00 3.16
2545 2715 8.252964 ACAACGAAAGAAGATATTAGTCCAAC 57.747 34.615 0.00 0.00 0.00 3.77
2546 2716 8.717821 CAACAACGAAAGAAGATATTAGTCCAA 58.282 33.333 0.00 0.00 0.00 3.53
2547 2717 8.092068 TCAACAACGAAAGAAGATATTAGTCCA 58.908 33.333 0.00 0.00 0.00 4.02
2548 2718 8.475331 TCAACAACGAAAGAAGATATTAGTCC 57.525 34.615 0.00 0.00 0.00 3.85
2550 2720 9.877178 AGATCAACAACGAAAGAAGATATTAGT 57.123 29.630 0.00 0.00 0.00 2.24
2552 2722 9.653287 ACAGATCAACAACGAAAGAAGATATTA 57.347 29.630 0.00 0.00 0.00 0.98
2553 2723 8.446273 CACAGATCAACAACGAAAGAAGATATT 58.554 33.333 0.00 0.00 0.00 1.28
2554 2724 7.065085 CCACAGATCAACAACGAAAGAAGATAT 59.935 37.037 0.00 0.00 0.00 1.63
2555 2725 6.368791 CCACAGATCAACAACGAAAGAAGATA 59.631 38.462 0.00 0.00 0.00 1.98
2556 2726 5.180117 CCACAGATCAACAACGAAAGAAGAT 59.820 40.000 0.00 0.00 0.00 2.40
2557 2727 4.511454 CCACAGATCAACAACGAAAGAAGA 59.489 41.667 0.00 0.00 0.00 2.87
2558 2728 4.511454 TCCACAGATCAACAACGAAAGAAG 59.489 41.667 0.00 0.00 0.00 2.85
2559 2729 4.447290 TCCACAGATCAACAACGAAAGAA 58.553 39.130 0.00 0.00 0.00 2.52
2560 2730 4.066646 TCCACAGATCAACAACGAAAGA 57.933 40.909 0.00 0.00 0.00 2.52
2561 2731 5.180117 AGAATCCACAGATCAACAACGAAAG 59.820 40.000 0.00 0.00 0.00 2.62
2562 2732 5.063204 AGAATCCACAGATCAACAACGAAA 58.937 37.500 0.00 0.00 0.00 3.46
2563 2733 4.641396 AGAATCCACAGATCAACAACGAA 58.359 39.130 0.00 0.00 0.00 3.85
2564 2734 4.271696 AGAATCCACAGATCAACAACGA 57.728 40.909 0.00 0.00 0.00 3.85
2565 2735 4.452114 TCAAGAATCCACAGATCAACAACG 59.548 41.667 0.00 0.00 0.00 4.10
2566 2736 5.947228 TCAAGAATCCACAGATCAACAAC 57.053 39.130 0.00 0.00 0.00 3.32
2567 2737 7.528996 AAATCAAGAATCCACAGATCAACAA 57.471 32.000 0.00 0.00 0.00 2.83
2568 2738 7.372714 CAAAATCAAGAATCCACAGATCAACA 58.627 34.615 0.00 0.00 0.00 3.33
2569 2739 6.309737 GCAAAATCAAGAATCCACAGATCAAC 59.690 38.462 0.00 0.00 0.00 3.18
2570 2740 6.015265 TGCAAAATCAAGAATCCACAGATCAA 60.015 34.615 0.00 0.00 0.00 2.57
2571 2741 5.477637 TGCAAAATCAAGAATCCACAGATCA 59.522 36.000 0.00 0.00 0.00 2.92
2572 2742 5.957798 TGCAAAATCAAGAATCCACAGATC 58.042 37.500 0.00 0.00 0.00 2.75
2573 2743 5.988310 TGCAAAATCAAGAATCCACAGAT 57.012 34.783 0.00 0.00 0.00 2.90
2574 2744 5.988310 ATGCAAAATCAAGAATCCACAGA 57.012 34.783 0.00 0.00 0.00 3.41
2575 2745 6.395629 AGAATGCAAAATCAAGAATCCACAG 58.604 36.000 0.00 0.00 0.00 3.66
2576 2746 6.349243 AGAATGCAAAATCAAGAATCCACA 57.651 33.333 0.00 0.00 0.00 4.17
2577 2747 7.095270 AGAAGAATGCAAAATCAAGAATCCAC 58.905 34.615 0.00 0.00 0.00 4.02
2578 2748 7.235935 AGAAGAATGCAAAATCAAGAATCCA 57.764 32.000 0.00 0.00 0.00 3.41
2579 2749 8.543862 AAAGAAGAATGCAAAATCAAGAATCC 57.456 30.769 0.00 0.00 0.00 3.01
2604 2774 0.394565 CCCCAACCCGCAATCAAAAA 59.605 50.000 0.00 0.00 0.00 1.94
2605 2775 0.760945 ACCCCAACCCGCAATCAAAA 60.761 50.000 0.00 0.00 0.00 2.44
2606 2776 0.760945 AACCCCAACCCGCAATCAAA 60.761 50.000 0.00 0.00 0.00 2.69
2607 2777 1.152440 AACCCCAACCCGCAATCAA 60.152 52.632 0.00 0.00 0.00 2.57
2608 2778 1.905843 CAACCCCAACCCGCAATCA 60.906 57.895 0.00 0.00 0.00 2.57
2609 2779 2.969827 CAACCCCAACCCGCAATC 59.030 61.111 0.00 0.00 0.00 2.67
2610 2780 3.310307 GCAACCCCAACCCGCAAT 61.310 61.111 0.00 0.00 0.00 3.56
2650 2820 5.638596 ATTTAAGTTTTACAGGCCGGAAG 57.361 39.130 10.86 0.00 0.00 3.46
2651 2821 6.408107 AAATTTAAGTTTTACAGGCCGGAA 57.592 33.333 10.86 0.00 0.00 4.30
2652 2822 6.489361 TGTAAATTTAAGTTTTACAGGCCGGA 59.511 34.615 10.86 0.00 41.93 5.14
2653 2823 6.679843 TGTAAATTTAAGTTTTACAGGCCGG 58.320 36.000 16.04 0.00 41.93 6.13
2654 2824 7.863877 AGTTGTAAATTTAAGTTTTACAGGCCG 59.136 33.333 17.85 0.00 45.31 6.13
2655 2825 9.537192 AAGTTGTAAATTTAAGTTTTACAGGCC 57.463 29.630 17.85 0.00 45.31 5.19
2675 2845 9.090692 GCAATATGCAAGATCAAATTAAGTTGT 57.909 29.630 14.70 3.41 44.26 3.32
2729 2899 9.807649 GCAAAGATTTGGTGATATCTTTTGTAT 57.192 29.630 3.98 0.00 44.52 2.29
2730 2900 9.023962 AGCAAAGATTTGGTGATATCTTTTGTA 57.976 29.630 9.07 0.00 44.52 2.41
2731 2901 7.899973 AGCAAAGATTTGGTGATATCTTTTGT 58.100 30.769 9.07 0.00 44.52 2.83
2732 2902 9.512435 CTAGCAAAGATTTGGTGATATCTTTTG 57.488 33.333 17.74 5.50 44.52 2.44
2733 2903 9.466497 TCTAGCAAAGATTTGGTGATATCTTTT 57.534 29.630 17.74 0.00 44.52 2.27
2734 2904 9.466497 TTCTAGCAAAGATTTGGTGATATCTTT 57.534 29.630 17.74 0.00 46.60 2.52
2755 2925 8.873830 TCGTTTTCTTTGATCTTGCTATTCTAG 58.126 33.333 0.00 0.00 0.00 2.43
2756 2926 8.771920 TCGTTTTCTTTGATCTTGCTATTCTA 57.228 30.769 0.00 0.00 0.00 2.10
2757 2927 7.604164 TCTCGTTTTCTTTGATCTTGCTATTCT 59.396 33.333 0.00 0.00 0.00 2.40
2758 2928 7.743104 TCTCGTTTTCTTTGATCTTGCTATTC 58.257 34.615 0.00 0.00 0.00 1.75
2759 2929 7.672983 TCTCGTTTTCTTTGATCTTGCTATT 57.327 32.000 0.00 0.00 0.00 1.73
2760 2930 7.389053 AGTTCTCGTTTTCTTTGATCTTGCTAT 59.611 33.333 0.00 0.00 0.00 2.97
2761 2931 6.706270 AGTTCTCGTTTTCTTTGATCTTGCTA 59.294 34.615 0.00 0.00 0.00 3.49
2762 2932 5.529060 AGTTCTCGTTTTCTTTGATCTTGCT 59.471 36.000 0.00 0.00 0.00 3.91
2763 2933 5.752712 AGTTCTCGTTTTCTTTGATCTTGC 58.247 37.500 0.00 0.00 0.00 4.01
2764 2934 7.851508 TGTAGTTCTCGTTTTCTTTGATCTTG 58.148 34.615 0.00 0.00 0.00 3.02
2765 2935 8.433421 TTGTAGTTCTCGTTTTCTTTGATCTT 57.567 30.769 0.00 0.00 0.00 2.40
2766 2936 7.711339 ACTTGTAGTTCTCGTTTTCTTTGATCT 59.289 33.333 0.00 0.00 0.00 2.75
2767 2937 7.852516 ACTTGTAGTTCTCGTTTTCTTTGATC 58.147 34.615 0.00 0.00 0.00 2.92
2768 2938 7.787725 ACTTGTAGTTCTCGTTTTCTTTGAT 57.212 32.000 0.00 0.00 0.00 2.57
2769 2939 7.605410 AACTTGTAGTTCTCGTTTTCTTTGA 57.395 32.000 0.00 0.00 31.77 2.69
2770 2940 7.749126 ACAAACTTGTAGTTCTCGTTTTCTTTG 59.251 33.333 0.00 0.00 37.47 2.77
2771 2941 7.813645 ACAAACTTGTAGTTCTCGTTTTCTTT 58.186 30.769 0.00 0.00 37.47 2.52
2772 2942 7.373778 ACAAACTTGTAGTTCTCGTTTTCTT 57.626 32.000 0.00 0.00 37.47 2.52
2773 2943 6.980051 ACAAACTTGTAGTTCTCGTTTTCT 57.020 33.333 0.00 0.00 37.47 2.52
2774 2944 9.712359 AAATACAAACTTGTAGTTCTCGTTTTC 57.288 29.630 8.97 0.00 45.42 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.