Multiple sequence alignment - TraesCS7A01G245700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G245700 | chr7A | 100.000 | 6893 | 0 | 0 | 1 | 6893 | 223681480 | 223674588 | 0.000000e+00 | 12730.0 |
1 | TraesCS7A01G245700 | chr7A | 92.991 | 214 | 15 | 0 | 5 | 218 | 439729371 | 439729584 | 5.190000e-81 | 313.0 |
2 | TraesCS7A01G245700 | chr7A | 95.035 | 141 | 7 | 0 | 4163 | 4303 | 634386549 | 634386689 | 9.000000e-54 | 222.0 |
3 | TraesCS7A01G245700 | chr7A | 94.393 | 107 | 5 | 1 | 1685 | 1791 | 238816409 | 238816514 | 5.530000e-36 | 163.0 |
4 | TraesCS7A01G245700 | chr7A | 79.730 | 148 | 19 | 11 | 6727 | 6868 | 312152526 | 312152668 | 5.690000e-16 | 97.1 |
5 | TraesCS7A01G245700 | chr7A | 79.333 | 150 | 21 | 10 | 6724 | 6868 | 312160177 | 312160321 | 5.690000e-16 | 97.1 |
6 | TraesCS7A01G245700 | chr7D | 98.333 | 2399 | 34 | 4 | 1773 | 4170 | 211873175 | 211870782 | 0.000000e+00 | 4204.0 |
7 | TraesCS7A01G245700 | chr7D | 92.944 | 2296 | 70 | 25 | 4442 | 6680 | 211870738 | 211868478 | 0.000000e+00 | 3258.0 |
8 | TraesCS7A01G245700 | chr7D | 95.997 | 1474 | 24 | 8 | 236 | 1687 | 211874637 | 211873177 | 0.000000e+00 | 2362.0 |
9 | TraesCS7A01G245700 | chr7D | 96.070 | 229 | 9 | 0 | 6665 | 6893 | 211868146 | 211867918 | 2.350000e-99 | 374.0 |
10 | TraesCS7A01G245700 | chr7D | 95.812 | 191 | 6 | 2 | 3910 | 4098 | 426750082 | 426750272 | 2.410000e-79 | 307.0 |
11 | TraesCS7A01G245700 | chr7D | 96.296 | 54 | 2 | 0 | 236 | 289 | 211874704 | 211874651 | 9.520000e-14 | 89.8 |
12 | TraesCS7A01G245700 | chr7B | 97.617 | 1888 | 35 | 7 | 2287 | 4170 | 189714514 | 189716395 | 0.000000e+00 | 3229.0 |
13 | TraesCS7A01G245700 | chr7B | 96.886 | 1734 | 30 | 5 | 4440 | 6156 | 189716434 | 189718160 | 0.000000e+00 | 2881.0 |
14 | TraesCS7A01G245700 | chr7B | 96.734 | 1041 | 24 | 5 | 655 | 1687 | 189712999 | 189714037 | 0.000000e+00 | 1725.0 |
15 | TraesCS7A01G245700 | chr7B | 98.125 | 480 | 9 | 0 | 1770 | 2249 | 189714036 | 189714515 | 0.000000e+00 | 837.0 |
16 | TraesCS7A01G245700 | chr7B | 94.888 | 313 | 15 | 1 | 6579 | 6890 | 189718466 | 189718778 | 8.040000e-134 | 488.0 |
17 | TraesCS7A01G245700 | chr7B | 96.085 | 281 | 11 | 0 | 236 | 516 | 189712383 | 189712663 | 6.300000e-125 | 459.0 |
18 | TraesCS7A01G245700 | chr7B | 92.925 | 212 | 15 | 0 | 6682 | 6893 | 189759238 | 189759449 | 6.710000e-80 | 309.0 |
19 | TraesCS7A01G245700 | chr7B | 97.761 | 134 | 2 | 1 | 522 | 655 | 189712826 | 189712958 | 5.380000e-56 | 230.0 |
20 | TraesCS7A01G245700 | chr7B | 91.503 | 153 | 8 | 5 | 4169 | 4319 | 494744551 | 494744402 | 9.060000e-49 | 206.0 |
21 | TraesCS7A01G245700 | chr7B | 91.781 | 146 | 8 | 3 | 4168 | 4313 | 579349521 | 579349380 | 4.220000e-47 | 200.0 |
22 | TraesCS7A01G245700 | chr7B | 94.915 | 118 | 6 | 0 | 4326 | 4443 | 559142184 | 559142301 | 1.180000e-42 | 185.0 |
23 | TraesCS7A01G245700 | chr7B | 88.000 | 125 | 14 | 1 | 1647 | 1771 | 383005241 | 383005364 | 5.570000e-31 | 147.0 |
24 | TraesCS7A01G245700 | chr7B | 100.000 | 44 | 0 | 0 | 4293 | 4336 | 189716393 | 189716436 | 1.590000e-11 | 82.4 |
25 | TraesCS7A01G245700 | chr5B | 96.522 | 345 | 10 | 2 | 3766 | 4109 | 528265605 | 528265262 | 2.790000e-158 | 569.0 |
26 | TraesCS7A01G245700 | chr5B | 85.792 | 183 | 25 | 1 | 6496 | 6677 | 64412086 | 64412268 | 7.060000e-45 | 193.0 |
27 | TraesCS7A01G245700 | chr5B | 83.744 | 203 | 30 | 3 | 6479 | 6680 | 484722054 | 484722254 | 9.130000e-44 | 189.0 |
28 | TraesCS7A01G245700 | chr5B | 98.925 | 93 | 1 | 0 | 1682 | 1774 | 550925088 | 550925180 | 4.280000e-37 | 167.0 |
29 | TraesCS7A01G245700 | chr1A | 95.652 | 207 | 2 | 6 | 3916 | 4117 | 50339307 | 50339511 | 6.670000e-85 | 326.0 |
30 | TraesCS7A01G245700 | chr1A | 90.000 | 160 | 10 | 5 | 4140 | 4296 | 286659378 | 286659534 | 1.170000e-47 | 202.0 |
31 | TraesCS7A01G245700 | chr1A | 92.063 | 126 | 9 | 1 | 4336 | 4460 | 499985463 | 499985338 | 7.110000e-40 | 176.0 |
32 | TraesCS7A01G245700 | chr1A | 92.000 | 125 | 10 | 0 | 4323 | 4447 | 575369370 | 575369246 | 7.110000e-40 | 176.0 |
33 | TraesCS7A01G245700 | chr2B | 98.343 | 181 | 1 | 1 | 3929 | 4109 | 314771395 | 314771573 | 4.010000e-82 | 316.0 |
34 | TraesCS7A01G245700 | chr1B | 98.876 | 178 | 1 | 1 | 3924 | 4100 | 246770882 | 246770705 | 4.010000e-82 | 316.0 |
35 | TraesCS7A01G245700 | chr1B | 98.473 | 131 | 2 | 0 | 4165 | 4295 | 372226379 | 372226509 | 1.500000e-56 | 231.0 |
36 | TraesCS7A01G245700 | chr1B | 95.588 | 136 | 6 | 0 | 4168 | 4303 | 102627854 | 102627719 | 1.160000e-52 | 219.0 |
37 | TraesCS7A01G245700 | chr1B | 92.715 | 151 | 7 | 4 | 4165 | 4313 | 658529996 | 658529848 | 1.510000e-51 | 215.0 |
38 | TraesCS7A01G245700 | chr1B | 93.846 | 130 | 8 | 0 | 4166 | 4295 | 551008835 | 551008964 | 5.450000e-46 | 196.0 |
39 | TraesCS7A01G245700 | chr1B | 92.143 | 140 | 10 | 1 | 4169 | 4308 | 623951084 | 623950946 | 5.450000e-46 | 196.0 |
40 | TraesCS7A01G245700 | chr1B | 96.000 | 100 | 2 | 2 | 1686 | 1785 | 286354876 | 286354779 | 1.990000e-35 | 161.0 |
41 | TraesCS7A01G245700 | chr6B | 98.333 | 180 | 2 | 1 | 3926 | 4105 | 358303027 | 358303205 | 1.440000e-81 | 315.0 |
42 | TraesCS7A01G245700 | chr6B | 96.154 | 130 | 5 | 0 | 4166 | 4295 | 191198136 | 191198007 | 5.420000e-51 | 213.0 |
43 | TraesCS7A01G245700 | chr6B | 86.034 | 179 | 20 | 4 | 6714 | 6889 | 435407903 | 435407727 | 3.280000e-43 | 187.0 |
44 | TraesCS7A01G245700 | chr4B | 97.297 | 185 | 4 | 1 | 3917 | 4100 | 78609330 | 78609146 | 5.190000e-81 | 313.0 |
45 | TraesCS7A01G245700 | chr4B | 84.659 | 176 | 26 | 1 | 6506 | 6680 | 470706532 | 470706707 | 2.560000e-39 | 174.0 |
46 | TraesCS7A01G245700 | chr4B | 79.365 | 189 | 38 | 1 | 6493 | 6680 | 470727524 | 470727712 | 1.560000e-26 | 132.0 |
47 | TraesCS7A01G245700 | chr6D | 92.593 | 216 | 16 | 0 | 3 | 218 | 402412570 | 402412785 | 1.870000e-80 | 311.0 |
48 | TraesCS7A01G245700 | chr6D | 98.131 | 107 | 2 | 0 | 4337 | 4443 | 468640999 | 468640893 | 3.280000e-43 | 187.0 |
49 | TraesCS7A01G245700 | chr6D | 97.222 | 108 | 3 | 0 | 4336 | 4443 | 121228676 | 121228569 | 4.250000e-42 | 183.0 |
50 | TraesCS7A01G245700 | chr6D | 97.222 | 108 | 3 | 0 | 4337 | 4444 | 298921090 | 298920983 | 4.250000e-42 | 183.0 |
51 | TraesCS7A01G245700 | chr6D | 95.575 | 113 | 5 | 0 | 4337 | 4449 | 38346433 | 38346321 | 1.530000e-41 | 182.0 |
52 | TraesCS7A01G245700 | chr3A | 92.627 | 217 | 14 | 2 | 3 | 218 | 509554736 | 509554521 | 1.870000e-80 | 311.0 |
53 | TraesCS7A01G245700 | chr3A | 92.130 | 216 | 17 | 0 | 3 | 218 | 738732342 | 738732127 | 8.690000e-79 | 305.0 |
54 | TraesCS7A01G245700 | chr3A | 91.005 | 189 | 17 | 0 | 6705 | 6893 | 440490189 | 440490001 | 8.870000e-64 | 255.0 |
55 | TraesCS7A01G245700 | chr3A | 94.326 | 141 | 7 | 1 | 4168 | 4307 | 454287821 | 454287961 | 1.510000e-51 | 215.0 |
56 | TraesCS7A01G245700 | chr3A | 94.853 | 136 | 5 | 2 | 4169 | 4304 | 154641375 | 154641508 | 1.950000e-50 | 211.0 |
57 | TraesCS7A01G245700 | chr3A | 87.719 | 171 | 17 | 4 | 6724 | 6893 | 628435413 | 628435580 | 5.450000e-46 | 196.0 |
58 | TraesCS7A01G245700 | chr3A | 94.545 | 110 | 4 | 2 | 1670 | 1778 | 648870547 | 648870439 | 1.190000e-37 | 169.0 |
59 | TraesCS7A01G245700 | chrUn | 92.202 | 218 | 14 | 3 | 3 | 218 | 260712264 | 260712048 | 8.690000e-79 | 305.0 |
60 | TraesCS7A01G245700 | chrUn | 98.148 | 108 | 2 | 0 | 4336 | 4443 | 352766984 | 352766877 | 9.130000e-44 | 189.0 |
61 | TraesCS7A01G245700 | chrUn | 97.273 | 110 | 3 | 0 | 4337 | 4446 | 11239800 | 11239909 | 3.280000e-43 | 187.0 |
62 | TraesCS7A01G245700 | chrUn | 97.196 | 107 | 3 | 0 | 4339 | 4445 | 30406060 | 30405954 | 1.530000e-41 | 182.0 |
63 | TraesCS7A01G245700 | chrUn | 96.330 | 109 | 4 | 0 | 4336 | 4444 | 218382242 | 218382134 | 5.490000e-41 | 180.0 |
64 | TraesCS7A01G245700 | chrUn | 96.330 | 109 | 4 | 0 | 4336 | 4444 | 218399790 | 218399682 | 5.490000e-41 | 180.0 |
65 | TraesCS7A01G245700 | chrUn | 95.495 | 111 | 5 | 0 | 4337 | 4447 | 338020906 | 338020796 | 1.980000e-40 | 178.0 |
66 | TraesCS7A01G245700 | chrUn | 93.750 | 112 | 7 | 0 | 4332 | 4443 | 12279495 | 12279384 | 1.190000e-37 | 169.0 |
67 | TraesCS7A01G245700 | chrUn | 94.495 | 109 | 6 | 0 | 4336 | 4444 | 96211899 | 96211791 | 1.190000e-37 | 169.0 |
68 | TraesCS7A01G245700 | chrUn | 94.495 | 109 | 6 | 0 | 4336 | 4444 | 478682022 | 478682130 | 1.190000e-37 | 169.0 |
69 | TraesCS7A01G245700 | chr6A | 92.130 | 216 | 17 | 0 | 3 | 218 | 592700491 | 592700276 | 8.690000e-79 | 305.0 |
70 | TraesCS7A01G245700 | chr6A | 97.297 | 111 | 3 | 0 | 4337 | 4447 | 475435162 | 475435052 | 9.130000e-44 | 189.0 |
71 | TraesCS7A01G245700 | chr6A | 95.000 | 120 | 5 | 1 | 4337 | 4455 | 108925791 | 108925910 | 3.280000e-43 | 187.0 |
72 | TraesCS7A01G245700 | chr6A | 97.297 | 111 | 2 | 1 | 4337 | 4447 | 250834516 | 250834625 | 3.280000e-43 | 187.0 |
73 | TraesCS7A01G245700 | chr6A | 81.065 | 169 | 17 | 13 | 6682 | 6842 | 145094376 | 145094215 | 3.380000e-23 | 121.0 |
74 | TraesCS7A01G245700 | chr3D | 92.130 | 216 | 17 | 0 | 3 | 218 | 44061235 | 44061450 | 8.690000e-79 | 305.0 |
75 | TraesCS7A01G245700 | chr3D | 86.413 | 184 | 23 | 2 | 6498 | 6680 | 453639283 | 453639465 | 4.220000e-47 | 200.0 |
76 | TraesCS7A01G245700 | chr3D | 85.561 | 187 | 26 | 1 | 6493 | 6678 | 613030951 | 613031137 | 1.960000e-45 | 195.0 |
77 | TraesCS7A01G245700 | chr3D | 98.148 | 108 | 2 | 0 | 4337 | 4444 | 606889393 | 606889286 | 9.130000e-44 | 189.0 |
78 | TraesCS7A01G245700 | chr3D | 93.548 | 124 | 8 | 0 | 4337 | 4460 | 308274907 | 308275030 | 1.180000e-42 | 185.0 |
79 | TraesCS7A01G245700 | chr3D | 88.591 | 149 | 16 | 1 | 6533 | 6680 | 453658060 | 453658208 | 5.490000e-41 | 180.0 |
80 | TraesCS7A01G245700 | chr3D | 98.947 | 95 | 1 | 0 | 1686 | 1780 | 439870614 | 439870520 | 3.310000e-38 | 171.0 |
81 | TraesCS7A01G245700 | chr3D | 84.706 | 170 | 25 | 1 | 6510 | 6678 | 123074501 | 123074332 | 1.190000e-37 | 169.0 |
82 | TraesCS7A01G245700 | chr2D | 92.130 | 216 | 17 | 0 | 3 | 218 | 449565821 | 449565606 | 8.690000e-79 | 305.0 |
83 | TraesCS7A01G245700 | chr2D | 92.130 | 216 | 17 | 0 | 3 | 218 | 565133179 | 565133394 | 8.690000e-79 | 305.0 |
84 | TraesCS7A01G245700 | chr2D | 83.945 | 218 | 24 | 6 | 6682 | 6893 | 98765150 | 98764938 | 1.520000e-46 | 198.0 |
85 | TraesCS7A01G245700 | chr2D | 86.413 | 184 | 22 | 3 | 6499 | 6680 | 198731352 | 198731534 | 1.520000e-46 | 198.0 |
86 | TraesCS7A01G245700 | chr2D | 95.726 | 117 | 5 | 0 | 4331 | 4447 | 90361362 | 90361246 | 9.130000e-44 | 189.0 |
87 | TraesCS7A01G245700 | chr2D | 85.326 | 184 | 26 | 1 | 6495 | 6677 | 486397568 | 486397751 | 9.130000e-44 | 189.0 |
88 | TraesCS7A01G245700 | chr2D | 94.915 | 118 | 5 | 1 | 4326 | 4443 | 349931228 | 349931344 | 4.250000e-42 | 183.0 |
89 | TraesCS7A01G245700 | chr2D | 84.659 | 176 | 26 | 1 | 6506 | 6680 | 540304660 | 540304485 | 2.560000e-39 | 174.0 |
90 | TraesCS7A01G245700 | chr4A | 92.019 | 213 | 17 | 0 | 6681 | 6893 | 282103892 | 282104104 | 4.040000e-77 | 300.0 |
91 | TraesCS7A01G245700 | chr4A | 86.702 | 188 | 24 | 1 | 6493 | 6679 | 568504165 | 568503978 | 2.520000e-49 | 207.0 |
92 | TraesCS7A01G245700 | chr4A | 96.581 | 117 | 4 | 0 | 4335 | 4451 | 278329152 | 278329268 | 1.960000e-45 | 195.0 |
93 | TraesCS7A01G245700 | chr4A | 94.958 | 119 | 5 | 1 | 4330 | 4448 | 315236344 | 315236461 | 1.180000e-42 | 185.0 |
94 | TraesCS7A01G245700 | chr4A | 96.939 | 98 | 2 | 1 | 1683 | 1780 | 27667596 | 27667500 | 5.530000e-36 | 163.0 |
95 | TraesCS7A01G245700 | chr3B | 93.706 | 143 | 8 | 1 | 4164 | 4305 | 526489438 | 526489580 | 5.420000e-51 | 213.0 |
96 | TraesCS7A01G245700 | chr3B | 90.323 | 155 | 11 | 4 | 4168 | 4320 | 532189554 | 532189402 | 4.220000e-47 | 200.0 |
97 | TraesCS7A01G245700 | chr3B | 98.198 | 111 | 2 | 0 | 4337 | 4447 | 12156861 | 12156971 | 1.960000e-45 | 195.0 |
98 | TraesCS7A01G245700 | chr2A | 91.503 | 153 | 11 | 2 | 4146 | 4296 | 2370549 | 2370701 | 7.010000e-50 | 209.0 |
99 | TraesCS7A01G245700 | chr2A | 86.413 | 184 | 22 | 3 | 6499 | 6680 | 216955325 | 216955507 | 1.520000e-46 | 198.0 |
100 | TraesCS7A01G245700 | chr2A | 95.161 | 124 | 5 | 1 | 4323 | 4446 | 96153231 | 96153109 | 1.960000e-45 | 195.0 |
101 | TraesCS7A01G245700 | chr2A | 100.000 | 90 | 0 | 0 | 1686 | 1775 | 622029588 | 622029677 | 4.280000e-37 | 167.0 |
102 | TraesCS7A01G245700 | chr5A | 92.143 | 140 | 11 | 0 | 4168 | 4307 | 56313090 | 56313229 | 1.520000e-46 | 198.0 |
103 | TraesCS7A01G245700 | chr5A | 97.321 | 112 | 3 | 0 | 4332 | 4443 | 492896256 | 492896367 | 2.540000e-44 | 191.0 |
104 | TraesCS7A01G245700 | chr5A | 96.522 | 115 | 4 | 0 | 4334 | 4448 | 507966382 | 507966496 | 2.540000e-44 | 191.0 |
105 | TraesCS7A01G245700 | chr4D | 97.321 | 112 | 3 | 0 | 4332 | 4443 | 211385326 | 211385437 | 2.540000e-44 | 191.0 |
106 | TraesCS7A01G245700 | chr4D | 98.148 | 108 | 2 | 0 | 4337 | 4444 | 317234621 | 317234728 | 9.130000e-44 | 189.0 |
107 | TraesCS7A01G245700 | chr4D | 85.246 | 183 | 26 | 1 | 6499 | 6680 | 195533027 | 195532845 | 3.280000e-43 | 187.0 |
108 | TraesCS7A01G245700 | chr4D | 95.614 | 114 | 5 | 0 | 4330 | 4443 | 483110130 | 483110243 | 4.250000e-42 | 183.0 |
109 | TraesCS7A01G245700 | chr4D | 97.196 | 107 | 3 | 0 | 4337 | 4443 | 415293114 | 415293008 | 1.530000e-41 | 182.0 |
110 | TraesCS7A01G245700 | chr4D | 94.783 | 115 | 6 | 0 | 4334 | 4448 | 260457615 | 260457729 | 5.490000e-41 | 180.0 |
111 | TraesCS7A01G245700 | chr4D | 82.514 | 183 | 20 | 5 | 6499 | 6679 | 17433437 | 17433265 | 4.310000e-32 | 150.0 |
112 | TraesCS7A01G245700 | chr1D | 96.522 | 115 | 4 | 0 | 4337 | 4451 | 386156721 | 386156835 | 2.540000e-44 | 191.0 |
113 | TraesCS7A01G245700 | chr1D | 98.148 | 108 | 2 | 0 | 4337 | 4444 | 227655311 | 227655418 | 9.130000e-44 | 189.0 |
114 | TraesCS7A01G245700 | chr1D | 97.273 | 110 | 3 | 0 | 4337 | 4446 | 440942569 | 440942678 | 3.280000e-43 | 187.0 |
115 | TraesCS7A01G245700 | chr1D | 83.957 | 187 | 27 | 3 | 6492 | 6677 | 115315988 | 115316172 | 7.110000e-40 | 176.0 |
116 | TraesCS7A01G245700 | chr1D | 92.623 | 122 | 8 | 1 | 4323 | 4444 | 5427993 | 5428113 | 2.560000e-39 | 174.0 |
117 | TraesCS7A01G245700 | chr1D | 95.146 | 103 | 4 | 1 | 1685 | 1787 | 107173591 | 107173692 | 1.990000e-35 | 161.0 |
118 | TraesCS7A01G245700 | chr1D | 81.250 | 160 | 16 | 9 | 6682 | 6834 | 149564407 | 149564255 | 4.370000e-22 | 117.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G245700 | chr7A | 223674588 | 223681480 | 6892 | True | 12730.000 | 12730 | 100.000 | 1 | 6893 | 1 | chr7A.!!$R1 | 6892 |
1 | TraesCS7A01G245700 | chr7D | 211867918 | 211874704 | 6786 | True | 2057.560 | 4204 | 95.928 | 236 | 6893 | 5 | chr7D.!!$R1 | 6657 |
2 | TraesCS7A01G245700 | chr7B | 189712383 | 189718778 | 6395 | False | 1241.425 | 3229 | 97.262 | 236 | 6890 | 8 | chr7B.!!$F4 | 6654 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
183 | 184 | 0.319641 | GCGACCCGAGAAAGTGAAGT | 60.320 | 55.000 | 0.00 | 0.0 | 0.00 | 3.01 | F |
605 | 830 | 0.532573 | GTCTCTCCGCTGTGAATCCA | 59.467 | 55.000 | 0.00 | 0.0 | 0.00 | 3.41 | F |
1700 | 1977 | 1.286849 | TCATCTACTCCCTCCGTTCCA | 59.713 | 52.381 | 0.00 | 0.0 | 0.00 | 3.53 | F |
2393 | 2670 | 0.179702 | TGCTTGGGATAGCTGAGCTG | 59.820 | 55.000 | 18.79 | 0.0 | 40.10 | 4.24 | F |
4182 | 4463 | 0.333652 | TCATGTACTCCCTCCGTCCA | 59.666 | 55.000 | 0.00 | 0.0 | 0.00 | 4.02 | F |
4374 | 4657 | 0.108186 | TGCTCGTCGCAGAAATGGAT | 60.108 | 50.000 | 0.00 | 0.0 | 45.47 | 3.41 | F |
5155 | 5438 | 0.173481 | TACAGTGCATCAGAGGCGTC | 59.827 | 55.000 | 1.98 | 0.0 | 0.00 | 5.19 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1346 | 1614 | 1.981495 | AGGGCAGTTAGATAGATGGGC | 59.019 | 52.381 | 0.00 | 0.0 | 0.00 | 5.36 | R |
1753 | 2030 | 2.019807 | ACTACTCCCTCCGTTCCAAA | 57.980 | 50.000 | 0.00 | 0.0 | 0.00 | 3.28 | R |
3472 | 3753 | 3.364565 | CGGGTGGAAAACAATTAGTGTCG | 60.365 | 47.826 | 0.00 | 0.0 | 40.60 | 4.35 | R |
4279 | 4560 | 0.179026 | CAGATACTCCCTCCGTCCGA | 60.179 | 60.000 | 0.00 | 0.0 | 0.00 | 4.55 | R |
5711 | 5994 | 0.179032 | ATCGGTTGCACACCTTCACA | 60.179 | 50.000 | 13.76 | 0.0 | 44.69 | 3.58 | R |
5838 | 6121 | 0.677288 | TCTTCGGAACACCGTGATGT | 59.323 | 50.000 | 5.28 | 0.0 | 45.96 | 3.06 | R |
6374 | 6715 | 0.104855 | AATGCTCCAGAATAGCGCGA | 59.895 | 50.000 | 12.10 | 0.0 | 43.11 | 5.87 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 5.950965 | TCTAATTTTGAAGATCTCGACGC | 57.049 | 39.130 | 0.00 | 0.00 | 0.00 | 5.19 |
26 | 27 | 3.641439 | AATTTTGAAGATCTCGACGCG | 57.359 | 42.857 | 3.53 | 3.53 | 0.00 | 6.01 |
27 | 28 | 2.341318 | TTTTGAAGATCTCGACGCGA | 57.659 | 45.000 | 15.93 | 0.00 | 0.00 | 5.87 |
36 | 37 | 3.280211 | TCGACGCGAGGAATCCAA | 58.720 | 55.556 | 15.93 | 0.00 | 0.00 | 3.53 |
37 | 38 | 1.813859 | TCGACGCGAGGAATCCAAT | 59.186 | 52.632 | 15.93 | 0.00 | 0.00 | 3.16 |
38 | 39 | 0.527600 | TCGACGCGAGGAATCCAATG | 60.528 | 55.000 | 15.93 | 0.00 | 0.00 | 2.82 |
39 | 40 | 1.490693 | CGACGCGAGGAATCCAATGG | 61.491 | 60.000 | 15.93 | 0.00 | 0.00 | 3.16 |
40 | 41 | 0.462047 | GACGCGAGGAATCCAATGGT | 60.462 | 55.000 | 15.93 | 0.00 | 0.00 | 3.55 |
41 | 42 | 0.744414 | ACGCGAGGAATCCAATGGTG | 60.744 | 55.000 | 15.93 | 0.00 | 0.00 | 4.17 |
42 | 43 | 0.461870 | CGCGAGGAATCCAATGGTGA | 60.462 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
43 | 44 | 1.750193 | GCGAGGAATCCAATGGTGAA | 58.250 | 50.000 | 0.61 | 0.00 | 0.00 | 3.18 |
44 | 45 | 2.091541 | GCGAGGAATCCAATGGTGAAA | 58.908 | 47.619 | 0.61 | 0.00 | 0.00 | 2.69 |
45 | 46 | 2.491693 | GCGAGGAATCCAATGGTGAAAA | 59.508 | 45.455 | 0.61 | 0.00 | 0.00 | 2.29 |
46 | 47 | 3.131046 | GCGAGGAATCCAATGGTGAAAAT | 59.869 | 43.478 | 0.61 | 0.00 | 0.00 | 1.82 |
47 | 48 | 4.338118 | GCGAGGAATCCAATGGTGAAAATA | 59.662 | 41.667 | 0.61 | 0.00 | 0.00 | 1.40 |
48 | 49 | 5.506317 | GCGAGGAATCCAATGGTGAAAATAG | 60.506 | 44.000 | 0.61 | 0.00 | 0.00 | 1.73 |
49 | 50 | 5.590259 | CGAGGAATCCAATGGTGAAAATAGT | 59.410 | 40.000 | 0.61 | 0.00 | 0.00 | 2.12 |
50 | 51 | 6.095440 | CGAGGAATCCAATGGTGAAAATAGTT | 59.905 | 38.462 | 0.61 | 0.00 | 0.00 | 2.24 |
51 | 52 | 7.410120 | AGGAATCCAATGGTGAAAATAGTTC | 57.590 | 36.000 | 0.61 | 0.00 | 0.00 | 3.01 |
52 | 53 | 6.095440 | AGGAATCCAATGGTGAAAATAGTTCG | 59.905 | 38.462 | 0.61 | 0.00 | 0.00 | 3.95 |
53 | 54 | 6.094881 | GGAATCCAATGGTGAAAATAGTTCGA | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
54 | 55 | 6.683974 | ATCCAATGGTGAAAATAGTTCGAG | 57.316 | 37.500 | 0.00 | 0.00 | 0.00 | 4.04 |
55 | 56 | 5.800296 | TCCAATGGTGAAAATAGTTCGAGA | 58.200 | 37.500 | 0.00 | 0.00 | 0.00 | 4.04 |
56 | 57 | 6.414732 | TCCAATGGTGAAAATAGTTCGAGAT | 58.585 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
57 | 58 | 6.884295 | TCCAATGGTGAAAATAGTTCGAGATT | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
58 | 59 | 7.393234 | TCCAATGGTGAAAATAGTTCGAGATTT | 59.607 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
59 | 60 | 7.485913 | CCAATGGTGAAAATAGTTCGAGATTTG | 59.514 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
60 | 61 | 7.921786 | ATGGTGAAAATAGTTCGAGATTTGA | 57.078 | 32.000 | 3.62 | 0.00 | 0.00 | 2.69 |
61 | 62 | 7.737972 | TGGTGAAAATAGTTCGAGATTTGAA | 57.262 | 32.000 | 3.62 | 0.00 | 0.00 | 2.69 |
62 | 63 | 8.160521 | TGGTGAAAATAGTTCGAGATTTGAAA | 57.839 | 30.769 | 3.62 | 0.00 | 0.00 | 2.69 |
63 | 64 | 8.289618 | TGGTGAAAATAGTTCGAGATTTGAAAG | 58.710 | 33.333 | 3.62 | 0.00 | 0.00 | 2.62 |
64 | 65 | 8.290325 | GGTGAAAATAGTTCGAGATTTGAAAGT | 58.710 | 33.333 | 3.62 | 0.00 | 0.00 | 2.66 |
67 | 68 | 9.461760 | GAAAATAGTTCGAGATTTGAAAGTACG | 57.538 | 33.333 | 3.62 | 0.00 | 0.00 | 3.67 |
68 | 69 | 7.521509 | AATAGTTCGAGATTTGAAAGTACGG | 57.478 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
69 | 70 | 4.879598 | AGTTCGAGATTTGAAAGTACGGT | 58.120 | 39.130 | 0.00 | 0.00 | 0.00 | 4.83 |
70 | 71 | 5.295152 | AGTTCGAGATTTGAAAGTACGGTT | 58.705 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
71 | 72 | 5.756833 | AGTTCGAGATTTGAAAGTACGGTTT | 59.243 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
72 | 73 | 6.925165 | AGTTCGAGATTTGAAAGTACGGTTTA | 59.075 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
73 | 74 | 7.439056 | AGTTCGAGATTTGAAAGTACGGTTTAA | 59.561 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
74 | 75 | 7.342318 | TCGAGATTTGAAAGTACGGTTTAAG | 57.658 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
75 | 76 | 7.147312 | TCGAGATTTGAAAGTACGGTTTAAGA | 58.853 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
76 | 77 | 7.327761 | TCGAGATTTGAAAGTACGGTTTAAGAG | 59.672 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
77 | 78 | 7.327761 | CGAGATTTGAAAGTACGGTTTAAGAGA | 59.672 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
78 | 79 | 9.152595 | GAGATTTGAAAGTACGGTTTAAGAGAT | 57.847 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
130 | 131 | 5.459536 | AAAAGGGAAAACTCTCTGATTGC | 57.540 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
131 | 132 | 2.704572 | AGGGAAAACTCTCTGATTGCG | 58.295 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
132 | 133 | 2.303022 | AGGGAAAACTCTCTGATTGCGA | 59.697 | 45.455 | 0.00 | 0.00 | 0.00 | 5.10 |
133 | 134 | 2.416893 | GGGAAAACTCTCTGATTGCGAC | 59.583 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
134 | 135 | 3.067106 | GGAAAACTCTCTGATTGCGACA | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
135 | 136 | 3.498397 | GGAAAACTCTCTGATTGCGACAA | 59.502 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
136 | 137 | 4.377841 | GGAAAACTCTCTGATTGCGACAAG | 60.378 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
137 | 138 | 3.393089 | AACTCTCTGATTGCGACAAGT | 57.607 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
138 | 139 | 2.681706 | ACTCTCTGATTGCGACAAGTG | 58.318 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
139 | 140 | 1.998315 | CTCTCTGATTGCGACAAGTGG | 59.002 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
140 | 141 | 0.445436 | CTCTGATTGCGACAAGTGGC | 59.555 | 55.000 | 0.00 | 0.00 | 34.76 | 5.01 |
158 | 159 | 4.520846 | GCGCTGCATGTACGCCAC | 62.521 | 66.667 | 15.78 | 0.48 | 46.63 | 5.01 |
159 | 160 | 2.815211 | CGCTGCATGTACGCCACT | 60.815 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
160 | 161 | 2.390599 | CGCTGCATGTACGCCACTT | 61.391 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
161 | 162 | 1.135315 | GCTGCATGTACGCCACTTG | 59.865 | 57.895 | 0.00 | 0.00 | 35.82 | 3.16 |
162 | 163 | 1.577328 | GCTGCATGTACGCCACTTGT | 61.577 | 55.000 | 0.00 | 0.00 | 35.30 | 3.16 |
163 | 164 | 0.443869 | CTGCATGTACGCCACTTGTC | 59.556 | 55.000 | 0.00 | 0.95 | 35.30 | 3.18 |
164 | 165 | 1.288419 | TGCATGTACGCCACTTGTCG | 61.288 | 55.000 | 0.00 | 0.00 | 35.30 | 4.35 |
165 | 166 | 1.419922 | CATGTACGCCACTTGTCGC | 59.580 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
172 | 173 | 4.351938 | CCACTTGTCGCGACCCGA | 62.352 | 66.667 | 34.34 | 19.74 | 45.15 | 5.14 |
176 | 177 | 1.372499 | CTTGTCGCGACCCGAGAAA | 60.372 | 57.895 | 34.34 | 20.10 | 46.64 | 2.52 |
177 | 178 | 1.344942 | CTTGTCGCGACCCGAGAAAG | 61.345 | 60.000 | 34.34 | 24.78 | 46.64 | 2.62 |
178 | 179 | 3.923111 | CTTGTCGCGACCCGAGAAAGT | 62.923 | 57.143 | 34.34 | 0.00 | 46.64 | 2.66 |
179 | 180 | 2.257371 | TCGCGACCCGAGAAAGTG | 59.743 | 61.111 | 3.71 | 0.00 | 41.89 | 3.16 |
180 | 181 | 2.257371 | CGCGACCCGAGAAAGTGA | 59.743 | 61.111 | 0.00 | 0.00 | 40.02 | 3.41 |
181 | 182 | 1.372499 | CGCGACCCGAGAAAGTGAA | 60.372 | 57.895 | 0.00 | 0.00 | 40.02 | 3.18 |
182 | 183 | 1.344942 | CGCGACCCGAGAAAGTGAAG | 61.345 | 60.000 | 0.00 | 0.00 | 40.02 | 3.02 |
183 | 184 | 0.319641 | GCGACCCGAGAAAGTGAAGT | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
184 | 185 | 1.068055 | GCGACCCGAGAAAGTGAAGTA | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
185 | 186 | 2.416972 | GCGACCCGAGAAAGTGAAGTAT | 60.417 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
186 | 187 | 3.846360 | CGACCCGAGAAAGTGAAGTATT | 58.154 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
202 | 203 | 6.707599 | GAAGTATTCTTTGCAACGAGTACT | 57.292 | 37.500 | 25.74 | 25.74 | 43.23 | 2.73 |
203 | 204 | 6.707599 | AAGTATTCTTTGCAACGAGTACTC | 57.292 | 37.500 | 29.04 | 13.18 | 33.35 | 2.59 |
204 | 205 | 5.169295 | AGTATTCTTTGCAACGAGTACTCC | 58.831 | 41.667 | 25.74 | 9.66 | 29.98 | 3.85 |
205 | 206 | 3.746045 | TTCTTTGCAACGAGTACTCCT | 57.254 | 42.857 | 17.23 | 2.73 | 0.00 | 3.69 |
206 | 207 | 3.746045 | TCTTTGCAACGAGTACTCCTT | 57.254 | 42.857 | 17.23 | 9.18 | 0.00 | 3.36 |
207 | 208 | 4.859304 | TCTTTGCAACGAGTACTCCTTA | 57.141 | 40.909 | 17.23 | 0.00 | 0.00 | 2.69 |
208 | 209 | 5.204409 | TCTTTGCAACGAGTACTCCTTAA | 57.796 | 39.130 | 17.23 | 2.08 | 0.00 | 1.85 |
209 | 210 | 5.790593 | TCTTTGCAACGAGTACTCCTTAAT | 58.209 | 37.500 | 17.23 | 0.00 | 0.00 | 1.40 |
210 | 211 | 6.228258 | TCTTTGCAACGAGTACTCCTTAATT | 58.772 | 36.000 | 17.23 | 1.76 | 0.00 | 1.40 |
211 | 212 | 7.380536 | TCTTTGCAACGAGTACTCCTTAATTA | 58.619 | 34.615 | 17.23 | 0.00 | 0.00 | 1.40 |
212 | 213 | 7.544566 | TCTTTGCAACGAGTACTCCTTAATTAG | 59.455 | 37.037 | 17.23 | 7.81 | 0.00 | 1.73 |
213 | 214 | 5.107133 | TGCAACGAGTACTCCTTAATTAGC | 58.893 | 41.667 | 17.23 | 10.99 | 0.00 | 3.09 |
214 | 215 | 4.206609 | GCAACGAGTACTCCTTAATTAGCG | 59.793 | 45.833 | 17.23 | 4.62 | 0.00 | 4.26 |
215 | 216 | 5.575957 | CAACGAGTACTCCTTAATTAGCGA | 58.424 | 41.667 | 17.23 | 0.00 | 0.00 | 4.93 |
216 | 217 | 6.207213 | CAACGAGTACTCCTTAATTAGCGAT | 58.793 | 40.000 | 17.23 | 0.00 | 0.00 | 4.58 |
217 | 218 | 6.388435 | ACGAGTACTCCTTAATTAGCGATT | 57.612 | 37.500 | 17.23 | 0.00 | 0.00 | 3.34 |
218 | 219 | 6.207213 | ACGAGTACTCCTTAATTAGCGATTG | 58.793 | 40.000 | 17.23 | 0.00 | 0.00 | 2.67 |
219 | 220 | 6.183360 | ACGAGTACTCCTTAATTAGCGATTGT | 60.183 | 38.462 | 17.23 | 0.57 | 0.00 | 2.71 |
220 | 221 | 6.696148 | CGAGTACTCCTTAATTAGCGATTGTT | 59.304 | 38.462 | 17.23 | 0.00 | 0.00 | 2.83 |
221 | 222 | 7.859377 | CGAGTACTCCTTAATTAGCGATTGTTA | 59.141 | 37.037 | 17.23 | 0.00 | 0.00 | 2.41 |
222 | 223 | 8.868635 | AGTACTCCTTAATTAGCGATTGTTAC | 57.131 | 34.615 | 0.00 | 0.00 | 0.00 | 2.50 |
223 | 224 | 8.472413 | AGTACTCCTTAATTAGCGATTGTTACA | 58.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
224 | 225 | 7.772332 | ACTCCTTAATTAGCGATTGTTACAG | 57.228 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
225 | 226 | 6.258068 | ACTCCTTAATTAGCGATTGTTACAGC | 59.742 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
226 | 227 | 5.233476 | TCCTTAATTAGCGATTGTTACAGCG | 59.767 | 40.000 | 5.55 | 5.55 | 34.34 | 5.18 |
229 | 230 | 2.021380 | GCGATTGTTACAGCGCCG | 59.979 | 61.111 | 18.91 | 0.00 | 43.33 | 6.46 |
230 | 231 | 2.701006 | CGATTGTTACAGCGCCGG | 59.299 | 61.111 | 2.29 | 0.00 | 0.00 | 6.13 |
231 | 232 | 2.403586 | GATTGTTACAGCGCCGGC | 59.596 | 61.111 | 19.07 | 19.07 | 40.37 | 6.13 |
411 | 479 | 0.973496 | ACGAAGCCTTCCTCCCTCTC | 60.973 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
453 | 521 | 2.318908 | GCTCATCTCCTCCATCACTCT | 58.681 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
481 | 549 | 2.036256 | ATTCGCTGGCCCTTGCTT | 59.964 | 55.556 | 0.00 | 0.00 | 37.74 | 3.91 |
605 | 830 | 0.532573 | GTCTCTCCGCTGTGAATCCA | 59.467 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
701 | 967 | 2.420022 | GAGAGCTTGCCAATTTCGCTTA | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
711 | 977 | 4.265320 | GCCAATTTCGCTTATTTTCCTTCG | 59.735 | 41.667 | 0.00 | 0.00 | 0.00 | 3.79 |
751 | 1017 | 2.269978 | CCAGATTGTGGCTGGTTGG | 58.730 | 57.895 | 0.00 | 0.00 | 46.19 | 3.77 |
802 | 1068 | 7.346471 | AGGGTTATGATTTGTGTAATGTAGCT | 58.654 | 34.615 | 0.00 | 0.00 | 0.00 | 3.32 |
914 | 1180 | 5.940470 | AGGACTTTTTGATGGATGTCTGTAC | 59.060 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1316 | 1584 | 5.483685 | AGACTGGTCTACTTTTACATGCA | 57.516 | 39.130 | 0.95 | 0.00 | 38.35 | 3.96 |
1346 | 1614 | 3.130869 | TGAATTTTCAGCATTCATCCCCG | 59.869 | 43.478 | 0.00 | 0.00 | 36.03 | 5.73 |
1351 | 1619 | 2.203538 | GCATTCATCCCCGCCCAT | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
1363 | 1631 | 1.338200 | CCCGCCCATCTATCTAACTGC | 60.338 | 57.143 | 0.00 | 0.00 | 0.00 | 4.40 |
1453 | 1730 | 9.400638 | CGGAAGAGTGAACTGTATATATCTTTC | 57.599 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
1695 | 1972 | 6.992715 | ACATTTATTTTCATCTACTCCCTCCG | 59.007 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
1696 | 1973 | 6.555463 | TTTATTTTCATCTACTCCCTCCGT | 57.445 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
1697 | 1974 | 6.555463 | TTATTTTCATCTACTCCCTCCGTT | 57.445 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
1698 | 1975 | 4.467198 | TTTTCATCTACTCCCTCCGTTC | 57.533 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
1699 | 1976 | 2.068834 | TCATCTACTCCCTCCGTTCC | 57.931 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
1700 | 1977 | 1.286849 | TCATCTACTCCCTCCGTTCCA | 59.713 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
1701 | 1978 | 2.108168 | CATCTACTCCCTCCGTTCCAA | 58.892 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
1702 | 1979 | 2.314071 | TCTACTCCCTCCGTTCCAAA | 57.686 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1703 | 1980 | 2.612000 | TCTACTCCCTCCGTTCCAAAA | 58.388 | 47.619 | 0.00 | 0.00 | 0.00 | 2.44 |
1704 | 1981 | 3.178865 | TCTACTCCCTCCGTTCCAAAAT | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1705 | 1982 | 4.355549 | TCTACTCCCTCCGTTCCAAAATA | 58.644 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
1706 | 1983 | 3.629142 | ACTCCCTCCGTTCCAAAATAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
1707 | 1984 | 3.178865 | ACTCCCTCCGTTCCAAAATAGA | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
1708 | 1985 | 3.780850 | ACTCCCTCCGTTCCAAAATAGAT | 59.219 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
1709 | 1986 | 4.130118 | CTCCCTCCGTTCCAAAATAGATG | 58.870 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1710 | 1987 | 3.778075 | TCCCTCCGTTCCAAAATAGATGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
1711 | 1988 | 3.877508 | CCCTCCGTTCCAAAATAGATGAC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
1712 | 1989 | 3.877508 | CCTCCGTTCCAAAATAGATGACC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
1713 | 1990 | 3.877508 | CTCCGTTCCAAAATAGATGACCC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
1714 | 1991 | 3.264706 | TCCGTTCCAAAATAGATGACCCA | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 4.51 |
1715 | 1992 | 4.013728 | CCGTTCCAAAATAGATGACCCAA | 58.986 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
1716 | 1993 | 4.142469 | CCGTTCCAAAATAGATGACCCAAC | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
1717 | 1994 | 4.700213 | CGTTCCAAAATAGATGACCCAACT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1718 | 1995 | 5.183140 | CGTTCCAAAATAGATGACCCAACTT | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
1719 | 1996 | 6.294508 | CGTTCCAAAATAGATGACCCAACTTT | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
1720 | 1997 | 6.588719 | TCCAAAATAGATGACCCAACTTTG | 57.411 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
1721 | 1998 | 6.074648 | TCCAAAATAGATGACCCAACTTTGT | 58.925 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1722 | 1999 | 7.235079 | TCCAAAATAGATGACCCAACTTTGTA | 58.765 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
1723 | 2000 | 7.175990 | TCCAAAATAGATGACCCAACTTTGTAC | 59.824 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
1724 | 2001 | 7.176690 | CCAAAATAGATGACCCAACTTTGTACT | 59.823 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
1725 | 2002 | 9.226606 | CAAAATAGATGACCCAACTTTGTACTA | 57.773 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1726 | 2003 | 9.802039 | AAAATAGATGACCCAACTTTGTACTAA | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
1727 | 2004 | 9.802039 | AAATAGATGACCCAACTTTGTACTAAA | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
1728 | 2005 | 9.449719 | AATAGATGACCCAACTTTGTACTAAAG | 57.550 | 33.333 | 13.08 | 13.08 | 0.00 | 1.85 |
1729 | 2006 | 6.838382 | AGATGACCCAACTTTGTACTAAAGT | 58.162 | 36.000 | 14.04 | 14.04 | 41.82 | 2.66 |
1731 | 2008 | 8.434392 | AGATGACCCAACTTTGTACTAAAGTTA | 58.566 | 33.333 | 23.56 | 14.79 | 45.57 | 2.24 |
1732 | 2009 | 8.617290 | ATGACCCAACTTTGTACTAAAGTTAG | 57.383 | 34.615 | 23.56 | 20.79 | 45.57 | 2.34 |
1733 | 2010 | 7.567458 | TGACCCAACTTTGTACTAAAGTTAGT | 58.433 | 34.615 | 23.56 | 22.58 | 45.57 | 2.24 |
1734 | 2011 | 8.703743 | TGACCCAACTTTGTACTAAAGTTAGTA | 58.296 | 33.333 | 23.56 | 6.81 | 45.57 | 1.82 |
1747 | 2024 | 7.567458 | ACTAAAGTTAGTACAAAGTTGGGTCA | 58.433 | 34.615 | 1.81 | 0.00 | 41.92 | 4.02 |
1748 | 2025 | 8.215736 | ACTAAAGTTAGTACAAAGTTGGGTCAT | 58.784 | 33.333 | 1.81 | 0.00 | 41.92 | 3.06 |
1749 | 2026 | 7.506328 | AAAGTTAGTACAAAGTTGGGTCATC | 57.494 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1750 | 2027 | 6.435292 | AGTTAGTACAAAGTTGGGTCATCT | 57.565 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
1751 | 2028 | 7.549147 | AGTTAGTACAAAGTTGGGTCATCTA | 57.451 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1752 | 2029 | 8.147244 | AGTTAGTACAAAGTTGGGTCATCTAT | 57.853 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
1753 | 2030 | 8.603304 | AGTTAGTACAAAGTTGGGTCATCTATT | 58.397 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
1754 | 2031 | 9.227777 | GTTAGTACAAAGTTGGGTCATCTATTT | 57.772 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1755 | 2032 | 9.802039 | TTAGTACAAAGTTGGGTCATCTATTTT | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1756 | 2033 | 8.110860 | AGTACAAAGTTGGGTCATCTATTTTG | 57.889 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
1757 | 2034 | 6.345096 | ACAAAGTTGGGTCATCTATTTTGG | 57.655 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
1758 | 2035 | 6.074648 | ACAAAGTTGGGTCATCTATTTTGGA | 58.925 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1759 | 2036 | 6.553100 | ACAAAGTTGGGTCATCTATTTTGGAA | 59.447 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
1760 | 2037 | 6.590234 | AAGTTGGGTCATCTATTTTGGAAC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
1761 | 2038 | 4.700213 | AGTTGGGTCATCTATTTTGGAACG | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
1762 | 2039 | 3.616219 | TGGGTCATCTATTTTGGAACGG | 58.384 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
1763 | 2040 | 3.264706 | TGGGTCATCTATTTTGGAACGGA | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
1764 | 2041 | 3.877508 | GGGTCATCTATTTTGGAACGGAG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
1765 | 2042 | 3.877508 | GGTCATCTATTTTGGAACGGAGG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1766 | 2043 | 3.877508 | GTCATCTATTTTGGAACGGAGGG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1767 | 2044 | 3.778075 | TCATCTATTTTGGAACGGAGGGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
1768 | 2045 | 3.906720 | TCTATTTTGGAACGGAGGGAG | 57.093 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
1769 | 2046 | 3.178865 | TCTATTTTGGAACGGAGGGAGT | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
1770 | 2047 | 4.355549 | TCTATTTTGGAACGGAGGGAGTA | 58.644 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
2206 | 2483 | 1.597937 | GCACTGACGTTGAAAGCCAAG | 60.598 | 52.381 | 0.00 | 0.00 | 35.03 | 3.61 |
2260 | 2537 | 3.826466 | GTCTAAGCCAAAGACAACATGC | 58.174 | 45.455 | 0.00 | 0.00 | 42.43 | 4.06 |
2393 | 2670 | 0.179702 | TGCTTGGGATAGCTGAGCTG | 59.820 | 55.000 | 18.79 | 0.00 | 40.10 | 4.24 |
2453 | 2732 | 9.575868 | TTTGTTGATAAAGTTATGGTTGGACTA | 57.424 | 29.630 | 0.00 | 0.00 | 0.00 | 2.59 |
2477 | 2756 | 2.642427 | TGTGATCACAGCTTGTTGTGT | 58.358 | 42.857 | 24.56 | 5.33 | 46.60 | 3.72 |
2776 | 3055 | 2.438021 | TGGTCTCTTGCACTAGTTTGGT | 59.562 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
2979 | 3258 | 4.635765 | TGCTATTAATGCACACCTGAGTTC | 59.364 | 41.667 | 0.00 | 0.00 | 35.31 | 3.01 |
3363 | 3642 | 1.943340 | TGCAAGCATTACACACGAACA | 59.057 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
3472 | 3753 | 2.501723 | TCCCTTCTGAGTAGGTTCATGC | 59.498 | 50.000 | 4.38 | 0.00 | 0.00 | 4.06 |
3491 | 3772 | 4.217754 | TGCGACACTAATTGTTTTCCAC | 57.782 | 40.909 | 0.00 | 0.00 | 39.17 | 4.02 |
3498 | 3779 | 2.074729 | AATTGTTTTCCACCCGGTCA | 57.925 | 45.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3499 | 3780 | 2.302587 | ATTGTTTTCCACCCGGTCAT | 57.697 | 45.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3584 | 3865 | 4.420168 | AGTCAACAAAACCATGTTTCACG | 58.580 | 39.130 | 0.00 | 0.00 | 41.44 | 4.35 |
3866 | 4147 | 3.044986 | CAAGTGGTTGCAGTCAAAATCG | 58.955 | 45.455 | 0.00 | 0.00 | 33.37 | 3.34 |
4013 | 4294 | 0.677098 | CAGCCTCTCTGCATTGCACT | 60.677 | 55.000 | 7.38 | 0.00 | 35.78 | 4.40 |
4170 | 4451 | 6.589830 | ATTGTTCGCTAGATTGTCATGTAC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
4171 | 4452 | 5.324784 | TGTTCGCTAGATTGTCATGTACT | 57.675 | 39.130 | 0.00 | 0.00 | 0.00 | 2.73 |
4172 | 4453 | 5.340803 | TGTTCGCTAGATTGTCATGTACTC | 58.659 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
4173 | 4454 | 4.569761 | TCGCTAGATTGTCATGTACTCC | 57.430 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
4174 | 4455 | 3.318275 | TCGCTAGATTGTCATGTACTCCC | 59.682 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
4175 | 4456 | 3.319405 | CGCTAGATTGTCATGTACTCCCT | 59.681 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
4176 | 4457 | 4.557695 | CGCTAGATTGTCATGTACTCCCTC | 60.558 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4177 | 4458 | 4.262249 | GCTAGATTGTCATGTACTCCCTCC | 60.262 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4178 | 4459 | 2.695666 | AGATTGTCATGTACTCCCTCCG | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4179 | 4460 | 1.933021 | TTGTCATGTACTCCCTCCGT | 58.067 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4180 | 4461 | 1.471119 | TGTCATGTACTCCCTCCGTC | 58.529 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4181 | 4462 | 0.745468 | GTCATGTACTCCCTCCGTCC | 59.255 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4182 | 4463 | 0.333652 | TCATGTACTCCCTCCGTCCA | 59.666 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4183 | 4464 | 0.747255 | CATGTACTCCCTCCGTCCAG | 59.253 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4184 | 4465 | 0.629596 | ATGTACTCCCTCCGTCCAGA | 59.370 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4185 | 4466 | 0.406750 | TGTACTCCCTCCGTCCAGAA | 59.593 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4186 | 4467 | 1.203087 | TGTACTCCCTCCGTCCAGAAA | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
4187 | 4468 | 2.108970 | GTACTCCCTCCGTCCAGAAAT | 58.891 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
4188 | 4469 | 2.544844 | ACTCCCTCCGTCCAGAAATA | 57.455 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4189 | 4470 | 2.108970 | ACTCCCTCCGTCCAGAAATAC | 58.891 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
4190 | 4471 | 2.292323 | ACTCCCTCCGTCCAGAAATACT | 60.292 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4191 | 4472 | 2.766828 | CTCCCTCCGTCCAGAAATACTT | 59.233 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4192 | 4473 | 2.500098 | TCCCTCCGTCCAGAAATACTTG | 59.500 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4193 | 4474 | 2.236395 | CCCTCCGTCCAGAAATACTTGT | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4194 | 4475 | 3.522553 | CCTCCGTCCAGAAATACTTGTC | 58.477 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4195 | 4476 | 3.056107 | CCTCCGTCCAGAAATACTTGTCA | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
4196 | 4477 | 4.383118 | CCTCCGTCCAGAAATACTTGTCAT | 60.383 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
4197 | 4478 | 4.755411 | TCCGTCCAGAAATACTTGTCATC | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
4198 | 4479 | 4.221924 | TCCGTCCAGAAATACTTGTCATCA | 59.778 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
4199 | 4480 | 4.935205 | CCGTCCAGAAATACTTGTCATCAA | 59.065 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
4200 | 4481 | 5.411361 | CCGTCCAGAAATACTTGTCATCAAA | 59.589 | 40.000 | 0.00 | 0.00 | 32.87 | 2.69 |
4201 | 4482 | 6.072728 | CCGTCCAGAAATACTTGTCATCAAAA | 60.073 | 38.462 | 0.00 | 0.00 | 32.87 | 2.44 |
4202 | 4483 | 7.362056 | CCGTCCAGAAATACTTGTCATCAAAAT | 60.362 | 37.037 | 0.00 | 0.00 | 32.87 | 1.82 |
4203 | 4484 | 7.482743 | CGTCCAGAAATACTTGTCATCAAAATG | 59.517 | 37.037 | 0.00 | 0.00 | 32.87 | 2.32 |
4204 | 4485 | 8.514594 | GTCCAGAAATACTTGTCATCAAAATGA | 58.485 | 33.333 | 0.00 | 0.00 | 39.63 | 2.57 |
4205 | 4486 | 9.076781 | TCCAGAAATACTTGTCATCAAAATGAA | 57.923 | 29.630 | 0.00 | 0.00 | 43.42 | 2.57 |
4206 | 4487 | 9.865321 | CCAGAAATACTTGTCATCAAAATGAAT | 57.135 | 29.630 | 0.00 | 0.00 | 43.42 | 2.57 |
4214 | 4495 | 9.918630 | ACTTGTCATCAAAATGAATAAAAGAGG | 57.081 | 29.630 | 0.00 | 0.00 | 43.42 | 3.69 |
4260 | 4541 | 8.778059 | AGTTATAGATACATCCCTTTTTGTCCA | 58.222 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
4261 | 4542 | 8.837389 | GTTATAGATACATCCCTTTTTGTCCAC | 58.163 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
4262 | 4543 | 5.520748 | AGATACATCCCTTTTTGTCCACT | 57.479 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
4263 | 4544 | 5.892348 | AGATACATCCCTTTTTGTCCACTT | 58.108 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
4264 | 4545 | 6.314917 | AGATACATCCCTTTTTGTCCACTTT | 58.685 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4265 | 4546 | 4.670896 | ACATCCCTTTTTGTCCACTTTG | 57.329 | 40.909 | 0.00 | 0.00 | 0.00 | 2.77 |
4266 | 4547 | 4.285863 | ACATCCCTTTTTGTCCACTTTGA | 58.714 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
4267 | 4548 | 4.901250 | ACATCCCTTTTTGTCCACTTTGAT | 59.099 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
4268 | 4549 | 4.935352 | TCCCTTTTTGTCCACTTTGATG | 57.065 | 40.909 | 0.00 | 0.00 | 0.00 | 3.07 |
4269 | 4550 | 4.541705 | TCCCTTTTTGTCCACTTTGATGA | 58.458 | 39.130 | 0.00 | 0.00 | 0.00 | 2.92 |
4270 | 4551 | 4.340950 | TCCCTTTTTGTCCACTTTGATGAC | 59.659 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4271 | 4552 | 4.099266 | CCCTTTTTGTCCACTTTGATGACA | 59.901 | 41.667 | 0.00 | 0.00 | 37.24 | 3.58 |
4272 | 4553 | 5.395103 | CCCTTTTTGTCCACTTTGATGACAA | 60.395 | 40.000 | 0.00 | 0.00 | 44.70 | 3.18 |
4273 | 4554 | 5.750067 | CCTTTTTGTCCACTTTGATGACAAG | 59.250 | 40.000 | 0.00 | 0.00 | 46.27 | 3.16 |
4274 | 4555 | 5.913137 | TTTTGTCCACTTTGATGACAAGT | 57.087 | 34.783 | 0.00 | 0.00 | 46.27 | 3.16 |
4275 | 4556 | 7.397892 | TTTTTGTCCACTTTGATGACAAGTA | 57.602 | 32.000 | 0.00 | 0.00 | 46.27 | 2.24 |
4276 | 4557 | 7.581213 | TTTTGTCCACTTTGATGACAAGTAT | 57.419 | 32.000 | 0.00 | 0.00 | 46.27 | 2.12 |
4277 | 4558 | 7.581213 | TTTGTCCACTTTGATGACAAGTATT | 57.419 | 32.000 | 0.00 | 0.00 | 46.27 | 1.89 |
4278 | 4559 | 7.581213 | TTGTCCACTTTGATGACAAGTATTT | 57.419 | 32.000 | 0.00 | 0.00 | 42.36 | 1.40 |
4279 | 4560 | 7.581213 | TGTCCACTTTGATGACAAGTATTTT | 57.419 | 32.000 | 0.00 | 0.00 | 36.16 | 1.82 |
4280 | 4561 | 7.648142 | TGTCCACTTTGATGACAAGTATTTTC | 58.352 | 34.615 | 0.00 | 0.00 | 36.16 | 2.29 |
4281 | 4562 | 6.797033 | GTCCACTTTGATGACAAGTATTTTCG | 59.203 | 38.462 | 0.00 | 0.00 | 37.32 | 3.46 |
4282 | 4563 | 6.072728 | TCCACTTTGATGACAAGTATTTTCGG | 60.073 | 38.462 | 0.00 | 0.00 | 37.32 | 4.30 |
4283 | 4564 | 6.072728 | CCACTTTGATGACAAGTATTTTCGGA | 60.073 | 38.462 | 0.00 | 0.00 | 37.32 | 4.55 |
4284 | 4565 | 6.797033 | CACTTTGATGACAAGTATTTTCGGAC | 59.203 | 38.462 | 0.00 | 0.00 | 37.32 | 4.79 |
4285 | 4566 | 5.524511 | TTGATGACAAGTATTTTCGGACG | 57.475 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
4286 | 4567 | 3.930229 | TGATGACAAGTATTTTCGGACGG | 59.070 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
4287 | 4568 | 3.663995 | TGACAAGTATTTTCGGACGGA | 57.336 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
4288 | 4569 | 3.581755 | TGACAAGTATTTTCGGACGGAG | 58.418 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
4289 | 4570 | 2.928116 | GACAAGTATTTTCGGACGGAGG | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4290 | 4571 | 2.277084 | CAAGTATTTTCGGACGGAGGG | 58.723 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4291 | 4572 | 1.856629 | AGTATTTTCGGACGGAGGGA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4292 | 4573 | 1.755380 | AGTATTTTCGGACGGAGGGAG | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4293 | 4574 | 1.479730 | GTATTTTCGGACGGAGGGAGT | 59.520 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
4294 | 4575 | 1.856629 | ATTTTCGGACGGAGGGAGTA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4339 | 4622 | 5.959583 | AGCCCTTTAAGTAAGCAGATACT | 57.040 | 39.130 | 0.00 | 0.00 | 37.73 | 2.12 |
4340 | 4623 | 5.919755 | AGCCCTTTAAGTAAGCAGATACTC | 58.080 | 41.667 | 0.00 | 0.00 | 35.09 | 2.59 |
4341 | 4624 | 5.057819 | GCCCTTTAAGTAAGCAGATACTCC | 58.942 | 45.833 | 0.00 | 0.00 | 35.09 | 3.85 |
4342 | 4625 | 5.612351 | CCCTTTAAGTAAGCAGATACTCCC | 58.388 | 45.833 | 0.00 | 0.00 | 35.09 | 4.30 |
4343 | 4626 | 5.367060 | CCCTTTAAGTAAGCAGATACTCCCT | 59.633 | 44.000 | 0.00 | 0.00 | 35.09 | 4.20 |
4344 | 4627 | 6.463190 | CCCTTTAAGTAAGCAGATACTCCCTC | 60.463 | 46.154 | 0.00 | 0.00 | 35.09 | 4.30 |
4345 | 4628 | 6.463190 | CCTTTAAGTAAGCAGATACTCCCTCC | 60.463 | 46.154 | 0.00 | 0.00 | 35.09 | 4.30 |
4346 | 4629 | 2.588620 | AGTAAGCAGATACTCCCTCCG | 58.411 | 52.381 | 0.00 | 0.00 | 30.26 | 4.63 |
4347 | 4630 | 2.091775 | AGTAAGCAGATACTCCCTCCGT | 60.092 | 50.000 | 0.00 | 0.00 | 30.26 | 4.69 |
4348 | 4631 | 1.867363 | AAGCAGATACTCCCTCCGTT | 58.133 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
4349 | 4632 | 1.404843 | AGCAGATACTCCCTCCGTTC | 58.595 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4350 | 4633 | 0.389757 | GCAGATACTCCCTCCGTTCC | 59.610 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
4351 | 4634 | 1.776662 | CAGATACTCCCTCCGTTCCA | 58.223 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4352 | 4635 | 2.108168 | CAGATACTCCCTCCGTTCCAA | 58.892 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
4353 | 4636 | 2.500098 | CAGATACTCCCTCCGTTCCAAA | 59.500 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4354 | 4637 | 3.134804 | CAGATACTCCCTCCGTTCCAAAT | 59.865 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
4355 | 4638 | 3.780850 | AGATACTCCCTCCGTTCCAAATT | 59.219 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
4356 | 4639 | 2.200373 | ACTCCCTCCGTTCCAAATTG | 57.800 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4357 | 4640 | 0.811281 | CTCCCTCCGTTCCAAATTGC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
4358 | 4641 | 0.404040 | TCCCTCCGTTCCAAATTGCT | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
4359 | 4642 | 0.811281 | CCCTCCGTTCCAAATTGCTC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4360 | 4643 | 0.447801 | CCTCCGTTCCAAATTGCTCG | 59.552 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
4361 | 4644 | 1.156736 | CTCCGTTCCAAATTGCTCGT | 58.843 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4362 | 4645 | 1.128692 | CTCCGTTCCAAATTGCTCGTC | 59.871 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
4363 | 4646 | 0.179225 | CCGTTCCAAATTGCTCGTCG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
4364 | 4647 | 0.789383 | CGTTCCAAATTGCTCGTCGC | 60.789 | 55.000 | 0.00 | 0.00 | 39.77 | 5.19 |
4372 | 4655 | 3.874873 | TGCTCGTCGCAGAAATGG | 58.125 | 55.556 | 0.00 | 0.00 | 45.47 | 3.16 |
4373 | 4656 | 1.291906 | TGCTCGTCGCAGAAATGGA | 59.708 | 52.632 | 0.00 | 0.00 | 45.47 | 3.41 |
4374 | 4657 | 0.108186 | TGCTCGTCGCAGAAATGGAT | 60.108 | 50.000 | 0.00 | 0.00 | 45.47 | 3.41 |
4375 | 4658 | 0.302890 | GCTCGTCGCAGAAATGGATG | 59.697 | 55.000 | 0.00 | 0.00 | 39.69 | 3.51 |
4376 | 4659 | 1.645034 | CTCGTCGCAGAAATGGATGT | 58.355 | 50.000 | 0.00 | 0.00 | 39.69 | 3.06 |
4377 | 4660 | 2.809446 | CTCGTCGCAGAAATGGATGTA | 58.191 | 47.619 | 0.00 | 0.00 | 39.69 | 2.29 |
4378 | 4661 | 3.384668 | CTCGTCGCAGAAATGGATGTAT | 58.615 | 45.455 | 0.00 | 0.00 | 39.69 | 2.29 |
4379 | 4662 | 3.381045 | TCGTCGCAGAAATGGATGTATC | 58.619 | 45.455 | 0.00 | 0.00 | 39.69 | 2.24 |
4380 | 4663 | 3.068165 | TCGTCGCAGAAATGGATGTATCT | 59.932 | 43.478 | 0.00 | 0.00 | 39.69 | 1.98 |
4381 | 4664 | 4.277423 | TCGTCGCAGAAATGGATGTATCTA | 59.723 | 41.667 | 0.00 | 0.00 | 39.69 | 1.98 |
4382 | 4665 | 4.618912 | CGTCGCAGAAATGGATGTATCTAG | 59.381 | 45.833 | 0.00 | 0.00 | 39.69 | 2.43 |
4383 | 4666 | 5.562890 | CGTCGCAGAAATGGATGTATCTAGA | 60.563 | 44.000 | 0.00 | 0.00 | 39.69 | 2.43 |
4384 | 4667 | 6.393990 | GTCGCAGAAATGGATGTATCTAGAT | 58.606 | 40.000 | 10.73 | 10.73 | 39.69 | 1.98 |
4385 | 4668 | 6.529829 | GTCGCAGAAATGGATGTATCTAGATC | 59.470 | 42.308 | 8.95 | 2.00 | 39.69 | 2.75 |
4386 | 4669 | 6.435591 | TCGCAGAAATGGATGTATCTAGATCT | 59.564 | 38.462 | 8.95 | 0.00 | 0.00 | 2.75 |
4387 | 4670 | 7.611855 | TCGCAGAAATGGATGTATCTAGATCTA | 59.388 | 37.037 | 8.95 | 1.69 | 0.00 | 1.98 |
4388 | 4671 | 8.246871 | CGCAGAAATGGATGTATCTAGATCTAA | 58.753 | 37.037 | 8.95 | 0.00 | 0.00 | 2.10 |
4389 | 4672 | 9.935241 | GCAGAAATGGATGTATCTAGATCTAAA | 57.065 | 33.333 | 8.95 | 0.00 | 0.00 | 1.85 |
4415 | 4698 | 6.537453 | ACATCTAGATACATCCATACCTGC | 57.463 | 41.667 | 4.54 | 0.00 | 0.00 | 4.85 |
4416 | 4699 | 5.126222 | ACATCTAGATACATCCATACCTGCG | 59.874 | 44.000 | 4.54 | 0.00 | 0.00 | 5.18 |
4417 | 4700 | 4.918588 | TCTAGATACATCCATACCTGCGA | 58.081 | 43.478 | 0.00 | 0.00 | 0.00 | 5.10 |
4418 | 4701 | 3.944055 | AGATACATCCATACCTGCGAC | 57.056 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
4419 | 4702 | 3.230976 | AGATACATCCATACCTGCGACA | 58.769 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
4420 | 4703 | 3.641436 | AGATACATCCATACCTGCGACAA | 59.359 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
4421 | 4704 | 2.315925 | ACATCCATACCTGCGACAAG | 57.684 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4422 | 4705 | 1.555075 | ACATCCATACCTGCGACAAGT | 59.445 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
4423 | 4706 | 2.764010 | ACATCCATACCTGCGACAAGTA | 59.236 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
4424 | 4707 | 3.196901 | ACATCCATACCTGCGACAAGTAA | 59.803 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
4425 | 4708 | 4.141711 | ACATCCATACCTGCGACAAGTAAT | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
4426 | 4709 | 4.481368 | TCCATACCTGCGACAAGTAATT | 57.519 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
4427 | 4710 | 4.439057 | TCCATACCTGCGACAAGTAATTC | 58.561 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
4428 | 4711 | 3.245284 | CCATACCTGCGACAAGTAATTCG | 59.755 | 47.826 | 0.00 | 0.00 | 38.31 | 3.34 |
4429 | 4712 | 1.722011 | ACCTGCGACAAGTAATTCGG | 58.278 | 50.000 | 0.00 | 0.00 | 35.73 | 4.30 |
4430 | 4713 | 1.274167 | ACCTGCGACAAGTAATTCGGA | 59.726 | 47.619 | 0.00 | 0.00 | 35.73 | 4.55 |
4431 | 4714 | 2.289195 | ACCTGCGACAAGTAATTCGGAA | 60.289 | 45.455 | 0.00 | 0.00 | 35.02 | 4.30 |
4432 | 4715 | 2.093783 | CCTGCGACAAGTAATTCGGAAC | 59.906 | 50.000 | 0.00 | 0.00 | 35.02 | 3.62 |
4556 | 4839 | 6.070481 | TCGAGTAGAGCTGATGTATCCTATCT | 60.070 | 42.308 | 0.00 | 0.00 | 0.00 | 1.98 |
4567 | 4850 | 5.023533 | TGTATCCTATCTCTTGGTTGTGC | 57.976 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
4944 | 5227 | 9.023962 | AGCATAAAAAGGAAGTCATGTTGATAA | 57.976 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
5155 | 5438 | 0.173481 | TACAGTGCATCAGAGGCGTC | 59.827 | 55.000 | 1.98 | 0.00 | 0.00 | 5.19 |
5320 | 5603 | 5.759763 | GGAAAATTTGGTCAAGCAAACAGAT | 59.240 | 36.000 | 9.33 | 0.00 | 0.00 | 2.90 |
5491 | 5774 | 1.463674 | GAAATGAGGTGGCCATTCGT | 58.536 | 50.000 | 9.72 | 9.04 | 33.51 | 3.85 |
5711 | 5994 | 7.344612 | ACCTGTTTCTTGATAGGGAAAAAGTTT | 59.655 | 33.333 | 0.00 | 0.00 | 35.91 | 2.66 |
5746 | 6029 | 7.852454 | GTGCAACCGATATATGTATATGCATTG | 59.148 | 37.037 | 11.75 | 3.73 | 30.48 | 2.82 |
5752 | 6035 | 9.603298 | CCGATATATGTATATGCATTGCAATTC | 57.397 | 33.333 | 16.46 | 5.52 | 43.62 | 2.17 |
5838 | 6121 | 0.749818 | TGGCAAAGCACCTCGTTGAA | 60.750 | 50.000 | 0.00 | 0.00 | 36.46 | 2.69 |
5941 | 6224 | 6.372937 | TGCCGTCATAACATTGTTGAATTCTA | 59.627 | 34.615 | 12.30 | 0.00 | 0.00 | 2.10 |
6154 | 6486 | 5.245531 | TGGTGACAAAATGATCTAGGTGAC | 58.754 | 41.667 | 0.00 | 0.00 | 37.44 | 3.67 |
6156 | 6488 | 5.352569 | GGTGACAAAATGATCTAGGTGACAG | 59.647 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6164 | 6496 | 0.037734 | TCTAGGTGACAGTGCCTCGA | 59.962 | 55.000 | 0.00 | 0.00 | 36.38 | 4.04 |
6217 | 6554 | 0.462047 | GGAATCATCAACGCCGAGGT | 60.462 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6251 | 6588 | 4.263572 | CACTTCGTGGGTGGGGCA | 62.264 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
6268 | 6605 | 3.076032 | GGGGCAGATAATAAATGGGGTCT | 59.924 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
6287 | 6624 | 1.073897 | GACCAAGCTCAAGGTGGCT | 59.926 | 57.895 | 9.88 | 0.00 | 38.50 | 4.75 |
6288 | 6625 | 0.324943 | GACCAAGCTCAAGGTGGCTA | 59.675 | 55.000 | 9.88 | 0.00 | 38.50 | 3.93 |
6317 | 6658 | 1.374252 | GGTTGACATCACGGACGCT | 60.374 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
6328 | 6669 | 1.070175 | CACGGACGCTTTGATTTTCGT | 60.070 | 47.619 | 0.00 | 0.00 | 37.92 | 3.85 |
6329 | 6670 | 1.600485 | ACGGACGCTTTGATTTTCGTT | 59.400 | 42.857 | 0.00 | 0.00 | 35.12 | 3.85 |
6342 | 6683 | 4.806775 | TGATTTTCGTTGTCTTTCTCGTCA | 59.193 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
6348 | 6689 | 3.203716 | GTTGTCTTTCTCGTCAAGGGTT | 58.796 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
6374 | 6715 | 1.528129 | CGCCCTTCTCAAGCTTTCTT | 58.472 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
6466 | 6809 | 0.035152 | TGCTCATTTGGACGAGGCAT | 60.035 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6479 | 6822 | 1.851304 | GAGGCATTCATTGGGGTGAA | 58.149 | 50.000 | 0.00 | 0.00 | 41.88 | 3.18 |
6497 | 6840 | 0.389948 | AAGTCGTCGCTGATGGGAAC | 60.390 | 55.000 | 0.00 | 0.00 | 36.89 | 3.62 |
6499 | 6842 | 1.078759 | GTCGTCGCTGATGGGAACTG | 61.079 | 60.000 | 0.00 | 0.00 | 36.89 | 3.16 |
6500 | 6843 | 1.215382 | CGTCGCTGATGGGAACTGA | 59.785 | 57.895 | 0.00 | 0.00 | 36.89 | 3.41 |
6501 | 6844 | 0.179100 | CGTCGCTGATGGGAACTGAT | 60.179 | 55.000 | 0.00 | 0.00 | 36.89 | 2.90 |
6502 | 6845 | 1.293924 | GTCGCTGATGGGAACTGATG | 58.706 | 55.000 | 0.00 | 0.00 | 36.89 | 3.07 |
6503 | 6846 | 0.462581 | TCGCTGATGGGAACTGATGC | 60.463 | 55.000 | 0.00 | 0.00 | 32.00 | 3.91 |
6504 | 6847 | 0.745486 | CGCTGATGGGAACTGATGCA | 60.745 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
6505 | 6848 | 1.688772 | GCTGATGGGAACTGATGCAT | 58.311 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
6506 | 6849 | 1.607628 | GCTGATGGGAACTGATGCATC | 59.392 | 52.381 | 20.14 | 20.14 | 0.00 | 3.91 |
6507 | 6850 | 2.228059 | CTGATGGGAACTGATGCATCC | 58.772 | 52.381 | 23.67 | 9.56 | 0.00 | 3.51 |
6508 | 6851 | 1.565288 | TGATGGGAACTGATGCATCCA | 59.435 | 47.619 | 23.67 | 14.19 | 34.82 | 3.41 |
6509 | 6852 | 2.176148 | TGATGGGAACTGATGCATCCAT | 59.824 | 45.455 | 23.67 | 18.23 | 37.66 | 3.41 |
6510 | 6853 | 2.832643 | TGGGAACTGATGCATCCATT | 57.167 | 45.000 | 23.67 | 16.99 | 34.82 | 3.16 |
6511 | 6854 | 3.104519 | TGGGAACTGATGCATCCATTT | 57.895 | 42.857 | 23.67 | 13.42 | 34.82 | 2.32 |
6512 | 6855 | 3.443052 | TGGGAACTGATGCATCCATTTT | 58.557 | 40.909 | 23.67 | 10.99 | 34.82 | 1.82 |
6513 | 6856 | 4.608269 | TGGGAACTGATGCATCCATTTTA | 58.392 | 39.130 | 23.67 | 3.07 | 34.82 | 1.52 |
6514 | 6857 | 4.402155 | TGGGAACTGATGCATCCATTTTAC | 59.598 | 41.667 | 23.67 | 11.41 | 34.82 | 2.01 |
6515 | 6858 | 4.402155 | GGGAACTGATGCATCCATTTTACA | 59.598 | 41.667 | 23.67 | 2.25 | 34.82 | 2.41 |
6516 | 6859 | 5.069516 | GGGAACTGATGCATCCATTTTACAT | 59.930 | 40.000 | 23.67 | 0.20 | 34.82 | 2.29 |
6517 | 6860 | 6.407299 | GGGAACTGATGCATCCATTTTACATT | 60.407 | 38.462 | 23.67 | 4.97 | 34.82 | 2.71 |
6518 | 6861 | 7.201902 | GGGAACTGATGCATCCATTTTACATTA | 60.202 | 37.037 | 23.67 | 0.00 | 34.82 | 1.90 |
6519 | 6862 | 8.362639 | GGAACTGATGCATCCATTTTACATTAT | 58.637 | 33.333 | 23.67 | 0.00 | 33.30 | 1.28 |
6520 | 6863 | 9.188588 | GAACTGATGCATCCATTTTACATTATG | 57.811 | 33.333 | 23.67 | 0.00 | 0.00 | 1.90 |
6521 | 6864 | 8.241497 | ACTGATGCATCCATTTTACATTATGT | 57.759 | 30.769 | 23.67 | 2.58 | 0.00 | 2.29 |
6522 | 6865 | 8.698210 | ACTGATGCATCCATTTTACATTATGTT | 58.302 | 29.630 | 23.67 | 0.00 | 0.00 | 2.71 |
6523 | 6866 | 9.188588 | CTGATGCATCCATTTTACATTATGTTC | 57.811 | 33.333 | 23.67 | 0.00 | 0.00 | 3.18 |
6524 | 6867 | 8.916062 | TGATGCATCCATTTTACATTATGTTCT | 58.084 | 29.630 | 23.67 | 0.00 | 0.00 | 3.01 |
6525 | 6868 | 9.754382 | GATGCATCCATTTTACATTATGTTCTT | 57.246 | 29.630 | 16.23 | 0.00 | 0.00 | 2.52 |
6527 | 6870 | 9.941325 | TGCATCCATTTTACATTATGTTCTTTT | 57.059 | 25.926 | 2.23 | 0.00 | 0.00 | 2.27 |
6633 | 6977 | 2.184533 | TGAAGAGGGAGATTACGGCAA | 58.815 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
6657 | 7001 | 6.946340 | ACTGAAATTTTGGACCTGAAAAAGT | 58.054 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
6721 | 7412 | 5.209240 | GTTGCTTGTAAATAGTTGCGTCAA | 58.791 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
6836 | 7527 | 9.849166 | GAAAATGCATTCAATGATTCCAAAATT | 57.151 | 25.926 | 13.38 | 0.00 | 0.00 | 1.82 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 7.060422 | GCGTCGAGATCTTCAAAATTAGATTC | 58.940 | 38.462 | 0.00 | 0.00 | 31.46 | 2.52 |
1 | 2 | 6.291849 | CGCGTCGAGATCTTCAAAATTAGATT | 60.292 | 38.462 | 0.00 | 0.00 | 31.46 | 2.40 |
2 | 3 | 5.174035 | CGCGTCGAGATCTTCAAAATTAGAT | 59.826 | 40.000 | 0.00 | 0.00 | 33.92 | 1.98 |
3 | 4 | 4.499399 | CGCGTCGAGATCTTCAAAATTAGA | 59.501 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
4 | 5 | 4.499399 | TCGCGTCGAGATCTTCAAAATTAG | 59.501 | 41.667 | 5.77 | 0.00 | 0.00 | 1.73 |
5 | 6 | 4.417506 | TCGCGTCGAGATCTTCAAAATTA | 58.582 | 39.130 | 5.77 | 0.00 | 0.00 | 1.40 |
6 | 7 | 3.250744 | TCGCGTCGAGATCTTCAAAATT | 58.749 | 40.909 | 5.77 | 0.00 | 0.00 | 1.82 |
7 | 8 | 2.876091 | TCGCGTCGAGATCTTCAAAAT | 58.124 | 42.857 | 5.77 | 0.00 | 0.00 | 1.82 |
8 | 9 | 2.341318 | TCGCGTCGAGATCTTCAAAA | 57.659 | 45.000 | 5.77 | 0.00 | 0.00 | 2.44 |
19 | 20 | 0.527600 | CATTGGATTCCTCGCGTCGA | 60.528 | 55.000 | 5.77 | 0.00 | 0.00 | 4.20 |
20 | 21 | 1.490693 | CCATTGGATTCCTCGCGTCG | 61.491 | 60.000 | 5.77 | 0.00 | 0.00 | 5.12 |
21 | 22 | 0.462047 | ACCATTGGATTCCTCGCGTC | 60.462 | 55.000 | 10.37 | 0.00 | 0.00 | 5.19 |
22 | 23 | 0.744414 | CACCATTGGATTCCTCGCGT | 60.744 | 55.000 | 10.37 | 0.00 | 0.00 | 6.01 |
23 | 24 | 0.461870 | TCACCATTGGATTCCTCGCG | 60.462 | 55.000 | 10.37 | 0.00 | 0.00 | 5.87 |
24 | 25 | 1.750193 | TTCACCATTGGATTCCTCGC | 58.250 | 50.000 | 10.37 | 0.00 | 0.00 | 5.03 |
25 | 26 | 4.989279 | ATTTTCACCATTGGATTCCTCG | 57.011 | 40.909 | 10.37 | 0.00 | 0.00 | 4.63 |
26 | 27 | 7.410120 | AACTATTTTCACCATTGGATTCCTC | 57.590 | 36.000 | 10.37 | 0.00 | 0.00 | 3.71 |
27 | 28 | 6.095440 | CGAACTATTTTCACCATTGGATTCCT | 59.905 | 38.462 | 10.37 | 0.00 | 0.00 | 3.36 |
28 | 29 | 6.094881 | TCGAACTATTTTCACCATTGGATTCC | 59.905 | 38.462 | 10.37 | 0.00 | 0.00 | 3.01 |
29 | 30 | 7.065803 | TCTCGAACTATTTTCACCATTGGATTC | 59.934 | 37.037 | 10.37 | 0.00 | 0.00 | 2.52 |
30 | 31 | 6.884295 | TCTCGAACTATTTTCACCATTGGATT | 59.116 | 34.615 | 10.37 | 0.00 | 0.00 | 3.01 |
31 | 32 | 6.414732 | TCTCGAACTATTTTCACCATTGGAT | 58.585 | 36.000 | 10.37 | 0.00 | 0.00 | 3.41 |
32 | 33 | 5.800296 | TCTCGAACTATTTTCACCATTGGA | 58.200 | 37.500 | 10.37 | 0.00 | 0.00 | 3.53 |
33 | 34 | 6.683974 | ATCTCGAACTATTTTCACCATTGG | 57.316 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
34 | 35 | 8.236586 | TCAAATCTCGAACTATTTTCACCATTG | 58.763 | 33.333 | 0.00 | 0.00 | 0.00 | 2.82 |
35 | 36 | 8.335532 | TCAAATCTCGAACTATTTTCACCATT | 57.664 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
36 | 37 | 7.921786 | TCAAATCTCGAACTATTTTCACCAT | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 3.55 |
37 | 38 | 7.737972 | TTCAAATCTCGAACTATTTTCACCA | 57.262 | 32.000 | 0.00 | 0.00 | 0.00 | 4.17 |
38 | 39 | 8.290325 | ACTTTCAAATCTCGAACTATTTTCACC | 58.710 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
41 | 42 | 9.461760 | CGTACTTTCAAATCTCGAACTATTTTC | 57.538 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
42 | 43 | 8.440833 | CCGTACTTTCAAATCTCGAACTATTTT | 58.559 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
43 | 44 | 7.601508 | ACCGTACTTTCAAATCTCGAACTATTT | 59.398 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
44 | 45 | 7.095270 | ACCGTACTTTCAAATCTCGAACTATT | 58.905 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
45 | 46 | 6.628185 | ACCGTACTTTCAAATCTCGAACTAT | 58.372 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
46 | 47 | 6.017400 | ACCGTACTTTCAAATCTCGAACTA | 57.983 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
47 | 48 | 4.879598 | ACCGTACTTTCAAATCTCGAACT | 58.120 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
48 | 49 | 5.587033 | AACCGTACTTTCAAATCTCGAAC | 57.413 | 39.130 | 0.00 | 0.00 | 0.00 | 3.95 |
49 | 50 | 7.652909 | TCTTAAACCGTACTTTCAAATCTCGAA | 59.347 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
50 | 51 | 7.147312 | TCTTAAACCGTACTTTCAAATCTCGA | 58.853 | 34.615 | 0.00 | 0.00 | 0.00 | 4.04 |
51 | 52 | 7.327761 | TCTCTTAAACCGTACTTTCAAATCTCG | 59.672 | 37.037 | 0.00 | 0.00 | 0.00 | 4.04 |
52 | 53 | 8.530269 | TCTCTTAAACCGTACTTTCAAATCTC | 57.470 | 34.615 | 0.00 | 0.00 | 0.00 | 2.75 |
58 | 59 | 8.702438 | CGTTTTATCTCTTAAACCGTACTTTCA | 58.298 | 33.333 | 0.00 | 0.00 | 32.79 | 2.69 |
59 | 60 | 8.703336 | ACGTTTTATCTCTTAAACCGTACTTTC | 58.297 | 33.333 | 0.00 | 0.00 | 44.08 | 2.62 |
60 | 61 | 8.593492 | ACGTTTTATCTCTTAAACCGTACTTT | 57.407 | 30.769 | 0.00 | 0.00 | 44.08 | 2.66 |
61 | 62 | 8.593492 | AACGTTTTATCTCTTAAACCGTACTT | 57.407 | 30.769 | 0.00 | 0.00 | 44.82 | 2.24 |
62 | 63 | 8.593492 | AAACGTTTTATCTCTTAAACCGTACT | 57.407 | 30.769 | 7.96 | 0.00 | 44.82 | 2.73 |
63 | 64 | 9.095529 | CAAAACGTTTTATCTCTTAAACCGTAC | 57.904 | 33.333 | 24.79 | 0.00 | 44.82 | 3.67 |
64 | 65 | 9.039870 | TCAAAACGTTTTATCTCTTAAACCGTA | 57.960 | 29.630 | 24.79 | 0.00 | 44.82 | 4.02 |
65 | 66 | 7.918643 | TCAAAACGTTTTATCTCTTAAACCGT | 58.081 | 30.769 | 24.79 | 0.00 | 46.69 | 4.83 |
66 | 67 | 8.770850 | TTCAAAACGTTTTATCTCTTAAACCG | 57.229 | 30.769 | 24.79 | 8.91 | 40.37 | 4.44 |
107 | 108 | 5.507985 | CGCAATCAGAGAGTTTTCCCTTTTT | 60.508 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
108 | 109 | 4.022849 | CGCAATCAGAGAGTTTTCCCTTTT | 60.023 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
109 | 110 | 3.503748 | CGCAATCAGAGAGTTTTCCCTTT | 59.496 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
110 | 111 | 3.077359 | CGCAATCAGAGAGTTTTCCCTT | 58.923 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
111 | 112 | 2.303022 | TCGCAATCAGAGAGTTTTCCCT | 59.697 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
112 | 113 | 2.416893 | GTCGCAATCAGAGAGTTTTCCC | 59.583 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
113 | 114 | 3.067106 | TGTCGCAATCAGAGAGTTTTCC | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
114 | 115 | 4.212214 | ACTTGTCGCAATCAGAGAGTTTTC | 59.788 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
115 | 116 | 4.024556 | CACTTGTCGCAATCAGAGAGTTTT | 60.025 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
116 | 117 | 3.496130 | CACTTGTCGCAATCAGAGAGTTT | 59.504 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
117 | 118 | 3.062763 | CACTTGTCGCAATCAGAGAGTT | 58.937 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
118 | 119 | 2.611473 | CCACTTGTCGCAATCAGAGAGT | 60.611 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
119 | 120 | 1.998315 | CCACTTGTCGCAATCAGAGAG | 59.002 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
120 | 121 | 1.941209 | GCCACTTGTCGCAATCAGAGA | 60.941 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
121 | 122 | 0.445436 | GCCACTTGTCGCAATCAGAG | 59.555 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
122 | 123 | 1.291184 | CGCCACTTGTCGCAATCAGA | 61.291 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
123 | 124 | 1.133253 | CGCCACTTGTCGCAATCAG | 59.867 | 57.895 | 0.00 | 0.00 | 0.00 | 2.90 |
124 | 125 | 3.252964 | CGCCACTTGTCGCAATCA | 58.747 | 55.556 | 0.00 | 0.00 | 0.00 | 2.57 |
135 | 136 | 4.758251 | TACATGCAGCGCGCCACT | 62.758 | 61.111 | 30.33 | 6.46 | 41.33 | 4.00 |
136 | 137 | 4.520846 | GTACATGCAGCGCGCCAC | 62.521 | 66.667 | 30.33 | 21.15 | 41.33 | 5.01 |
142 | 143 | 2.390599 | AAGTGGCGTACATGCAGCG | 61.391 | 57.895 | 0.00 | 0.00 | 36.28 | 5.18 |
143 | 144 | 1.135315 | CAAGTGGCGTACATGCAGC | 59.865 | 57.895 | 0.00 | 0.00 | 36.28 | 5.25 |
144 | 145 | 0.443869 | GACAAGTGGCGTACATGCAG | 59.556 | 55.000 | 0.00 | 0.00 | 36.28 | 4.41 |
145 | 146 | 1.288419 | CGACAAGTGGCGTACATGCA | 61.288 | 55.000 | 0.00 | 0.00 | 42.66 | 3.96 |
146 | 147 | 1.419922 | CGACAAGTGGCGTACATGC | 59.580 | 57.895 | 0.00 | 0.00 | 42.66 | 4.06 |
155 | 156 | 4.351938 | TCGGGTCGCGACAAGTGG | 62.352 | 66.667 | 37.26 | 21.35 | 0.00 | 4.00 |
156 | 157 | 2.742710 | TTCTCGGGTCGCGACAAGTG | 62.743 | 60.000 | 37.26 | 28.07 | 0.00 | 3.16 |
157 | 158 | 2.079020 | TTTCTCGGGTCGCGACAAGT | 62.079 | 55.000 | 37.26 | 0.00 | 0.00 | 3.16 |
158 | 159 | 1.344942 | CTTTCTCGGGTCGCGACAAG | 61.345 | 60.000 | 37.26 | 28.86 | 0.00 | 3.16 |
159 | 160 | 1.372499 | CTTTCTCGGGTCGCGACAA | 60.372 | 57.895 | 37.26 | 21.56 | 0.00 | 3.18 |
160 | 161 | 2.257371 | CTTTCTCGGGTCGCGACA | 59.743 | 61.111 | 37.26 | 18.77 | 0.00 | 4.35 |
161 | 162 | 2.087009 | CACTTTCTCGGGTCGCGAC | 61.087 | 63.158 | 30.67 | 30.67 | 0.00 | 5.19 |
162 | 163 | 1.798234 | TTCACTTTCTCGGGTCGCGA | 61.798 | 55.000 | 3.71 | 3.71 | 0.00 | 5.87 |
163 | 164 | 1.344942 | CTTCACTTTCTCGGGTCGCG | 61.345 | 60.000 | 0.00 | 0.00 | 0.00 | 5.87 |
164 | 165 | 0.319641 | ACTTCACTTTCTCGGGTCGC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
165 | 166 | 3.505464 | ATACTTCACTTTCTCGGGTCG | 57.495 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
166 | 167 | 5.074584 | AGAATACTTCACTTTCTCGGGTC | 57.925 | 43.478 | 0.00 | 0.00 | 0.00 | 4.46 |
167 | 168 | 5.485209 | AAGAATACTTCACTTTCTCGGGT | 57.515 | 39.130 | 0.00 | 0.00 | 0.00 | 5.28 |
168 | 169 | 5.390991 | GCAAAGAATACTTCACTTTCTCGGG | 60.391 | 44.000 | 0.00 | 0.00 | 35.05 | 5.14 |
169 | 170 | 5.179368 | TGCAAAGAATACTTCACTTTCTCGG | 59.821 | 40.000 | 0.00 | 0.00 | 35.05 | 4.63 |
170 | 171 | 6.228273 | TGCAAAGAATACTTCACTTTCTCG | 57.772 | 37.500 | 0.00 | 0.00 | 35.05 | 4.04 |
171 | 172 | 6.575201 | CGTTGCAAAGAATACTTCACTTTCTC | 59.425 | 38.462 | 6.52 | 0.00 | 35.05 | 2.87 |
172 | 173 | 6.260050 | TCGTTGCAAAGAATACTTCACTTTCT | 59.740 | 34.615 | 12.88 | 0.00 | 35.05 | 2.52 |
173 | 174 | 6.427150 | TCGTTGCAAAGAATACTTCACTTTC | 58.573 | 36.000 | 12.88 | 0.00 | 35.05 | 2.62 |
174 | 175 | 6.038271 | ACTCGTTGCAAAGAATACTTCACTTT | 59.962 | 34.615 | 15.91 | 0.00 | 35.05 | 2.66 |
175 | 176 | 5.527582 | ACTCGTTGCAAAGAATACTTCACTT | 59.472 | 36.000 | 15.91 | 0.00 | 35.05 | 3.16 |
176 | 177 | 5.057149 | ACTCGTTGCAAAGAATACTTCACT | 58.943 | 37.500 | 15.91 | 0.00 | 35.05 | 3.41 |
177 | 178 | 5.344207 | ACTCGTTGCAAAGAATACTTCAC | 57.656 | 39.130 | 15.91 | 0.00 | 35.05 | 3.18 |
178 | 179 | 6.220930 | AGTACTCGTTGCAAAGAATACTTCA | 58.779 | 36.000 | 24.37 | 0.00 | 35.05 | 3.02 |
179 | 180 | 6.183360 | GGAGTACTCGTTGCAAAGAATACTTC | 60.183 | 42.308 | 28.40 | 24.82 | 35.05 | 3.01 |
180 | 181 | 5.638234 | GGAGTACTCGTTGCAAAGAATACTT | 59.362 | 40.000 | 28.40 | 17.03 | 38.05 | 2.24 |
181 | 182 | 5.047235 | AGGAGTACTCGTTGCAAAGAATACT | 60.047 | 40.000 | 28.23 | 28.23 | 0.00 | 2.12 |
182 | 183 | 5.169295 | AGGAGTACTCGTTGCAAAGAATAC | 58.831 | 41.667 | 21.26 | 21.26 | 0.00 | 1.89 |
183 | 184 | 5.401531 | AGGAGTACTCGTTGCAAAGAATA | 57.598 | 39.130 | 15.91 | 7.96 | 0.00 | 1.75 |
184 | 185 | 4.273148 | AGGAGTACTCGTTGCAAAGAAT | 57.727 | 40.909 | 15.91 | 9.02 | 0.00 | 2.40 |
185 | 186 | 3.746045 | AGGAGTACTCGTTGCAAAGAA | 57.254 | 42.857 | 15.91 | 0.00 | 0.00 | 2.52 |
186 | 187 | 3.746045 | AAGGAGTACTCGTTGCAAAGA | 57.254 | 42.857 | 25.72 | 14.45 | 36.47 | 2.52 |
187 | 188 | 6.481954 | AATTAAGGAGTACTCGTTGCAAAG | 57.518 | 37.500 | 31.33 | 2.46 | 38.07 | 2.77 |
188 | 189 | 6.091713 | GCTAATTAAGGAGTACTCGTTGCAAA | 59.908 | 38.462 | 31.33 | 21.62 | 38.07 | 3.68 |
189 | 190 | 5.579511 | GCTAATTAAGGAGTACTCGTTGCAA | 59.420 | 40.000 | 31.33 | 22.18 | 38.07 | 4.08 |
190 | 191 | 5.107133 | GCTAATTAAGGAGTACTCGTTGCA | 58.893 | 41.667 | 31.33 | 21.45 | 38.07 | 4.08 |
191 | 192 | 4.206609 | CGCTAATTAAGGAGTACTCGTTGC | 59.793 | 45.833 | 31.33 | 25.08 | 38.07 | 4.17 |
192 | 193 | 5.575957 | TCGCTAATTAAGGAGTACTCGTTG | 58.424 | 41.667 | 31.33 | 19.48 | 38.07 | 4.10 |
193 | 194 | 5.824904 | TCGCTAATTAAGGAGTACTCGTT | 57.175 | 39.130 | 28.20 | 28.20 | 40.33 | 3.85 |
194 | 195 | 6.183360 | ACAATCGCTAATTAAGGAGTACTCGT | 60.183 | 38.462 | 16.56 | 14.43 | 0.00 | 4.18 |
195 | 196 | 6.207213 | ACAATCGCTAATTAAGGAGTACTCG | 58.793 | 40.000 | 16.56 | 2.02 | 0.00 | 4.18 |
196 | 197 | 8.966194 | GTAACAATCGCTAATTAAGGAGTACTC | 58.034 | 37.037 | 14.87 | 14.87 | 0.00 | 2.59 |
197 | 198 | 8.472413 | TGTAACAATCGCTAATTAAGGAGTACT | 58.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
198 | 199 | 8.638685 | TGTAACAATCGCTAATTAAGGAGTAC | 57.361 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
199 | 200 | 7.437267 | GCTGTAACAATCGCTAATTAAGGAGTA | 59.563 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
200 | 201 | 6.258068 | GCTGTAACAATCGCTAATTAAGGAGT | 59.742 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
201 | 202 | 6.562270 | CGCTGTAACAATCGCTAATTAAGGAG | 60.562 | 42.308 | 0.00 | 0.00 | 0.00 | 3.69 |
202 | 203 | 5.233476 | CGCTGTAACAATCGCTAATTAAGGA | 59.767 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
203 | 204 | 5.432157 | CGCTGTAACAATCGCTAATTAAGG | 58.568 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
204 | 205 | 4.898488 | GCGCTGTAACAATCGCTAATTAAG | 59.102 | 41.667 | 0.00 | 0.00 | 43.70 | 1.85 |
205 | 206 | 4.260456 | GGCGCTGTAACAATCGCTAATTAA | 60.260 | 41.667 | 7.64 | 0.00 | 45.97 | 1.40 |
206 | 207 | 3.246699 | GGCGCTGTAACAATCGCTAATTA | 59.753 | 43.478 | 7.64 | 0.00 | 45.97 | 1.40 |
207 | 208 | 2.031683 | GGCGCTGTAACAATCGCTAATT | 59.968 | 45.455 | 7.64 | 0.00 | 45.97 | 1.40 |
208 | 209 | 1.597663 | GGCGCTGTAACAATCGCTAAT | 59.402 | 47.619 | 7.64 | 0.00 | 45.97 | 1.73 |
209 | 210 | 1.003851 | GGCGCTGTAACAATCGCTAA | 58.996 | 50.000 | 7.64 | 0.00 | 45.97 | 3.09 |
210 | 211 | 1.143373 | CGGCGCTGTAACAATCGCTA | 61.143 | 55.000 | 8.45 | 0.00 | 45.97 | 4.26 |
211 | 212 | 2.452813 | CGGCGCTGTAACAATCGCT | 61.453 | 57.895 | 8.45 | 0.00 | 45.97 | 4.93 |
212 | 213 | 2.021380 | CGGCGCTGTAACAATCGC | 59.979 | 61.111 | 8.45 | 6.62 | 45.99 | 4.58 |
213 | 214 | 2.701006 | CCGGCGCTGTAACAATCG | 59.299 | 61.111 | 16.49 | 2.43 | 0.00 | 3.34 |
214 | 215 | 2.106683 | AGCCGGCGCTGTAACAATC | 61.107 | 57.895 | 23.20 | 0.00 | 46.19 | 2.67 |
215 | 216 | 2.046314 | AGCCGGCGCTGTAACAAT | 60.046 | 55.556 | 23.20 | 0.00 | 46.19 | 2.71 |
224 | 225 | 2.899044 | TTGTGTGTAAAGCCGGCGC | 61.899 | 57.895 | 23.20 | 13.39 | 0.00 | 6.53 |
225 | 226 | 1.082366 | GTTGTGTGTAAAGCCGGCG | 60.082 | 57.895 | 23.20 | 0.00 | 0.00 | 6.46 |
226 | 227 | 0.382515 | TTGTTGTGTGTAAAGCCGGC | 59.617 | 50.000 | 21.89 | 21.89 | 0.00 | 6.13 |
227 | 228 | 2.853731 | TTTGTTGTGTGTAAAGCCGG | 57.146 | 45.000 | 0.00 | 0.00 | 0.00 | 6.13 |
228 | 229 | 4.677832 | GGTATTTTGTTGTGTGTAAAGCCG | 59.322 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
229 | 230 | 5.838529 | AGGTATTTTGTTGTGTGTAAAGCC | 58.161 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
230 | 231 | 7.867752 | TCTAGGTATTTTGTTGTGTGTAAAGC | 58.132 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
231 | 232 | 9.825972 | CATCTAGGTATTTTGTTGTGTGTAAAG | 57.174 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
232 | 233 | 8.788806 | CCATCTAGGTATTTTGTTGTGTGTAAA | 58.211 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
233 | 234 | 7.392113 | CCCATCTAGGTATTTTGTTGTGTGTAA | 59.608 | 37.037 | 0.00 | 0.00 | 34.66 | 2.41 |
234 | 235 | 6.882140 | CCCATCTAGGTATTTTGTTGTGTGTA | 59.118 | 38.462 | 0.00 | 0.00 | 34.66 | 2.90 |
240 | 241 | 3.315191 | CGGCCCATCTAGGTATTTTGTTG | 59.685 | 47.826 | 0.00 | 0.00 | 34.66 | 3.33 |
383 | 451 | 3.230522 | AAGGCTTCGTTACCGGCGT | 62.231 | 57.895 | 6.01 | 0.00 | 33.95 | 5.68 |
402 | 470 | 1.284785 | ACAGAGAGACAGAGAGGGAGG | 59.715 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
411 | 479 | 0.732571 | GGCGAGAGACAGAGAGACAG | 59.267 | 60.000 | 0.00 | 0.00 | 40.66 | 3.51 |
453 | 521 | 1.065701 | GCCAGCGAATCGAGAGACTAA | 59.934 | 52.381 | 6.91 | 0.00 | 46.97 | 2.24 |
481 | 549 | 0.748729 | AACTTTTCACCGTTCGCCCA | 60.749 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
517 | 585 | 6.521133 | GCAGATTGTAACAATCGACTGAAAAG | 59.479 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
520 | 588 | 4.391830 | GGCAGATTGTAACAATCGACTGAA | 59.608 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
524 | 749 | 2.536928 | GCGGCAGATTGTAACAATCGAC | 60.537 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
605 | 830 | 3.371965 | TCCGGAACTACAAGGAAGCTAT | 58.628 | 45.455 | 0.00 | 0.00 | 0.00 | 2.97 |
701 | 967 | 5.183904 | CCATCTTCTTGGTTCGAAGGAAAAT | 59.816 | 40.000 | 0.00 | 0.00 | 38.66 | 1.82 |
711 | 977 | 4.218635 | GGAAAACCTCCATCTTCTTGGTTC | 59.781 | 45.833 | 0.00 | 0.00 | 44.67 | 3.62 |
751 | 1017 | 9.832445 | TCTTAGGACAATACCAGTTTATCATTC | 57.168 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
802 | 1068 | 7.557358 | TCGTTGTACCCTATAATAGTCACAAGA | 59.443 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
914 | 1180 | 4.079970 | TGGAATATAGACCGGTAGAGCAG | 58.920 | 47.826 | 7.34 | 0.00 | 0.00 | 4.24 |
1346 | 1614 | 1.981495 | AGGGCAGTTAGATAGATGGGC | 59.019 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
1351 | 1619 | 6.808321 | AACAATACAGGGCAGTTAGATAGA | 57.192 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
1687 | 1964 | 3.906720 | TCTATTTTGGAACGGAGGGAG | 57.093 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
1688 | 1965 | 3.778075 | TCATCTATTTTGGAACGGAGGGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
1689 | 1966 | 3.877508 | GTCATCTATTTTGGAACGGAGGG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1690 | 1967 | 3.877508 | GGTCATCTATTTTGGAACGGAGG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1691 | 1968 | 3.877508 | GGGTCATCTATTTTGGAACGGAG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
1692 | 1969 | 3.264706 | TGGGTCATCTATTTTGGAACGGA | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
1693 | 1970 | 3.616219 | TGGGTCATCTATTTTGGAACGG | 58.384 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
1694 | 1971 | 4.700213 | AGTTGGGTCATCTATTTTGGAACG | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
1695 | 1972 | 6.590234 | AAGTTGGGTCATCTATTTTGGAAC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
1696 | 1973 | 6.553100 | ACAAAGTTGGGTCATCTATTTTGGAA | 59.447 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
1697 | 1974 | 6.074648 | ACAAAGTTGGGTCATCTATTTTGGA | 58.925 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1698 | 1975 | 6.345096 | ACAAAGTTGGGTCATCTATTTTGG | 57.655 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
1699 | 1976 | 8.110860 | AGTACAAAGTTGGGTCATCTATTTTG | 57.889 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
1700 | 1977 | 9.802039 | TTAGTACAAAGTTGGGTCATCTATTTT | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1701 | 1978 | 9.802039 | TTTAGTACAAAGTTGGGTCATCTATTT | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
1702 | 1979 | 9.449719 | CTTTAGTACAAAGTTGGGTCATCTATT | 57.550 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
1703 | 1980 | 8.603304 | ACTTTAGTACAAAGTTGGGTCATCTAT | 58.397 | 33.333 | 14.04 | 0.00 | 37.18 | 1.98 |
1704 | 1981 | 7.970102 | ACTTTAGTACAAAGTTGGGTCATCTA | 58.030 | 34.615 | 14.04 | 0.00 | 37.18 | 1.98 |
1705 | 1982 | 6.838382 | ACTTTAGTACAAAGTTGGGTCATCT | 58.162 | 36.000 | 14.04 | 0.00 | 37.18 | 2.90 |
1706 | 1983 | 7.506328 | AACTTTAGTACAAAGTTGGGTCATC | 57.494 | 36.000 | 23.48 | 0.00 | 45.58 | 2.92 |
1707 | 1984 | 8.215736 | ACTAACTTTAGTACAAAGTTGGGTCAT | 58.784 | 33.333 | 28.62 | 17.19 | 46.38 | 3.06 |
1708 | 1985 | 7.567458 | ACTAACTTTAGTACAAAGTTGGGTCA | 58.433 | 34.615 | 28.62 | 17.50 | 46.38 | 4.02 |
1721 | 1998 | 8.703743 | TGACCCAACTTTGTACTAACTTTAGTA | 58.296 | 33.333 | 4.98 | 4.98 | 43.36 | 1.82 |
1722 | 1999 | 7.567458 | TGACCCAACTTTGTACTAACTTTAGT | 58.433 | 34.615 | 6.85 | 6.85 | 45.39 | 2.24 |
1723 | 2000 | 8.617290 | ATGACCCAACTTTGTACTAACTTTAG | 57.383 | 34.615 | 0.00 | 0.00 | 36.82 | 1.85 |
1724 | 2001 | 8.434392 | AGATGACCCAACTTTGTACTAACTTTA | 58.566 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
1725 | 2002 | 7.287810 | AGATGACCCAACTTTGTACTAACTTT | 58.712 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
1726 | 2003 | 6.838382 | AGATGACCCAACTTTGTACTAACTT | 58.162 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
1727 | 2004 | 6.435292 | AGATGACCCAACTTTGTACTAACT | 57.565 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
1728 | 2005 | 8.788325 | AATAGATGACCCAACTTTGTACTAAC | 57.212 | 34.615 | 0.00 | 0.00 | 0.00 | 2.34 |
1729 | 2006 | 9.802039 | AAAATAGATGACCCAACTTTGTACTAA | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
1730 | 2007 | 9.226606 | CAAAATAGATGACCCAACTTTGTACTA | 57.773 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1731 | 2008 | 7.176690 | CCAAAATAGATGACCCAACTTTGTACT | 59.823 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
1732 | 2009 | 7.175990 | TCCAAAATAGATGACCCAACTTTGTAC | 59.824 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
1733 | 2010 | 7.235079 | TCCAAAATAGATGACCCAACTTTGTA | 58.765 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
1734 | 2011 | 6.074648 | TCCAAAATAGATGACCCAACTTTGT | 58.925 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1735 | 2012 | 6.588719 | TCCAAAATAGATGACCCAACTTTG | 57.411 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
1736 | 2013 | 6.294508 | CGTTCCAAAATAGATGACCCAACTTT | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
1737 | 2014 | 5.183140 | CGTTCCAAAATAGATGACCCAACTT | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
1738 | 2015 | 4.700213 | CGTTCCAAAATAGATGACCCAACT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1739 | 2016 | 4.142469 | CCGTTCCAAAATAGATGACCCAAC | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
1740 | 2017 | 4.013728 | CCGTTCCAAAATAGATGACCCAA | 58.986 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
1741 | 2018 | 3.264706 | TCCGTTCCAAAATAGATGACCCA | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 4.51 |
1742 | 2019 | 3.877508 | CTCCGTTCCAAAATAGATGACCC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
1743 | 2020 | 3.877508 | CCTCCGTTCCAAAATAGATGACC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
1744 | 2021 | 3.877508 | CCCTCCGTTCCAAAATAGATGAC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
1745 | 2022 | 3.778075 | TCCCTCCGTTCCAAAATAGATGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
1746 | 2023 | 4.130118 | CTCCCTCCGTTCCAAAATAGATG | 58.870 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1747 | 2024 | 3.780850 | ACTCCCTCCGTTCCAAAATAGAT | 59.219 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
1748 | 2025 | 3.178865 | ACTCCCTCCGTTCCAAAATAGA | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
1749 | 2026 | 3.629142 | ACTCCCTCCGTTCCAAAATAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
1750 | 2027 | 4.098894 | ACTACTCCCTCCGTTCCAAAATA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
1751 | 2028 | 2.910977 | ACTACTCCCTCCGTTCCAAAAT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1752 | 2029 | 2.332117 | ACTACTCCCTCCGTTCCAAAA | 58.668 | 47.619 | 0.00 | 0.00 | 0.00 | 2.44 |
1753 | 2030 | 2.019807 | ACTACTCCCTCCGTTCCAAA | 57.980 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1754 | 2031 | 2.905415 | TACTACTCCCTCCGTTCCAA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1755 | 2032 | 2.905415 | TTACTACTCCCTCCGTTCCA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1756 | 2033 | 3.564264 | AGATTACTACTCCCTCCGTTCC | 58.436 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
1757 | 2034 | 6.460814 | GGTTAAGATTACTACTCCCTCCGTTC | 60.461 | 46.154 | 0.00 | 0.00 | 0.00 | 3.95 |
1758 | 2035 | 5.362143 | GGTTAAGATTACTACTCCCTCCGTT | 59.638 | 44.000 | 0.00 | 0.00 | 0.00 | 4.44 |
1759 | 2036 | 4.892345 | GGTTAAGATTACTACTCCCTCCGT | 59.108 | 45.833 | 0.00 | 0.00 | 0.00 | 4.69 |
1760 | 2037 | 4.280425 | GGGTTAAGATTACTACTCCCTCCG | 59.720 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1761 | 2038 | 5.465901 | AGGGTTAAGATTACTACTCCCTCC | 58.534 | 45.833 | 0.00 | 0.00 | 35.95 | 4.30 |
1762 | 2039 | 6.840181 | AGAAGGGTTAAGATTACTACTCCCTC | 59.160 | 42.308 | 0.00 | 0.00 | 37.97 | 4.30 |
1763 | 2040 | 6.754178 | AGAAGGGTTAAGATTACTACTCCCT | 58.246 | 40.000 | 0.00 | 0.00 | 39.34 | 4.20 |
1764 | 2041 | 6.610425 | TGAGAAGGGTTAAGATTACTACTCCC | 59.390 | 42.308 | 0.00 | 0.00 | 33.08 | 4.30 |
1765 | 2042 | 7.657023 | TGAGAAGGGTTAAGATTACTACTCC | 57.343 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1768 | 2045 | 9.327628 | GGAAATGAGAAGGGTTAAGATTACTAC | 57.672 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
1769 | 2046 | 9.053472 | TGGAAATGAGAAGGGTTAAGATTACTA | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1770 | 2047 | 7.829706 | GTGGAAATGAGAAGGGTTAAGATTACT | 59.170 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
1961 | 2238 | 8.856153 | TTGGTTAGAAGCACATGAACTATAAA | 57.144 | 30.769 | 0.00 | 0.00 | 35.94 | 1.40 |
1963 | 2240 | 8.892723 | CAATTGGTTAGAAGCACATGAACTATA | 58.107 | 33.333 | 0.00 | 0.00 | 35.94 | 1.31 |
2206 | 2483 | 4.501071 | TCCTGTATTCTACAAAGTTCGGC | 58.499 | 43.478 | 0.00 | 0.00 | 38.38 | 5.54 |
2393 | 2670 | 2.134789 | AGATGGATCCCACAGTTTGC | 57.865 | 50.000 | 9.90 | 0.00 | 35.80 | 3.68 |
2450 | 2729 | 6.039717 | ACAACAAGCTGTGATCACATTTTAGT | 59.960 | 34.615 | 28.00 | 18.90 | 41.01 | 2.24 |
2453 | 2732 | 5.266733 | ACAACAAGCTGTGATCACATTTT | 57.733 | 34.783 | 28.00 | 20.78 | 41.01 | 1.82 |
2953 | 3232 | 5.653769 | ACTCAGGTGTGCATTAATAGCATTT | 59.346 | 36.000 | 13.30 | 1.64 | 44.79 | 2.32 |
3000 | 3279 | 8.757877 | AGAAGCCCTGCAATAATATTTAACAAA | 58.242 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
3240 | 3519 | 6.983890 | GTGGTTTTCTCTTGAGGCAAATTTAA | 59.016 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
3363 | 3642 | 6.071320 | GCATGGGGAGGTCTTTATCTTTTAT | 58.929 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3472 | 3753 | 3.364565 | CGGGTGGAAAACAATTAGTGTCG | 60.365 | 47.826 | 0.00 | 0.00 | 40.60 | 4.35 |
3491 | 3772 | 6.127225 | ACTCATCTCAATCATATATGACCGGG | 60.127 | 42.308 | 17.60 | 11.47 | 40.03 | 5.73 |
3584 | 3865 | 9.219603 | TGCCAATATTTACTGATGTAGATTAGC | 57.780 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
3866 | 4147 | 2.481289 | AGCTTACAAGGCCAGAAGAC | 57.519 | 50.000 | 5.01 | 0.00 | 0.00 | 3.01 |
4013 | 4294 | 2.627933 | ACCTAGTCTTACCCCTGCAAA | 58.372 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
4170 | 4451 | 2.389715 | AGTATTTCTGGACGGAGGGAG | 58.610 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4171 | 4452 | 2.500098 | CAAGTATTTCTGGACGGAGGGA | 59.500 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4172 | 4453 | 2.236395 | ACAAGTATTTCTGGACGGAGGG | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4173 | 4454 | 3.056107 | TGACAAGTATTTCTGGACGGAGG | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
4174 | 4455 | 4.188247 | TGACAAGTATTTCTGGACGGAG | 57.812 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
4175 | 4456 | 4.221924 | TGATGACAAGTATTTCTGGACGGA | 59.778 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
4176 | 4457 | 4.503910 | TGATGACAAGTATTTCTGGACGG | 58.496 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
4177 | 4458 | 6.480524 | TTTGATGACAAGTATTTCTGGACG | 57.519 | 37.500 | 0.00 | 0.00 | 37.32 | 4.79 |
4178 | 4459 | 8.514594 | TCATTTTGATGACAAGTATTTCTGGAC | 58.485 | 33.333 | 0.00 | 0.00 | 37.32 | 4.02 |
4179 | 4460 | 8.634335 | TCATTTTGATGACAAGTATTTCTGGA | 57.366 | 30.769 | 0.00 | 0.00 | 37.32 | 3.86 |
4180 | 4461 | 9.865321 | ATTCATTTTGATGACAAGTATTTCTGG | 57.135 | 29.630 | 0.00 | 0.00 | 37.32 | 3.86 |
4188 | 4469 | 9.918630 | CCTCTTTTATTCATTTTGATGACAAGT | 57.081 | 29.630 | 0.00 | 0.00 | 37.32 | 3.16 |
4234 | 4515 | 8.778059 | TGGACAAAAAGGGATGTATCTATAACT | 58.222 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4235 | 4516 | 8.837389 | GTGGACAAAAAGGGATGTATCTATAAC | 58.163 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
4236 | 4517 | 8.778059 | AGTGGACAAAAAGGGATGTATCTATAA | 58.222 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
4237 | 4518 | 8.331931 | AGTGGACAAAAAGGGATGTATCTATA | 57.668 | 34.615 | 0.00 | 0.00 | 0.00 | 1.31 |
4238 | 4519 | 7.213178 | AGTGGACAAAAAGGGATGTATCTAT | 57.787 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4239 | 4520 | 6.636454 | AGTGGACAAAAAGGGATGTATCTA | 57.364 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
4240 | 4521 | 5.520748 | AGTGGACAAAAAGGGATGTATCT | 57.479 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
4241 | 4522 | 6.208599 | TCAAAGTGGACAAAAAGGGATGTATC | 59.791 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
4242 | 4523 | 6.074648 | TCAAAGTGGACAAAAAGGGATGTAT | 58.925 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4243 | 4524 | 5.450453 | TCAAAGTGGACAAAAAGGGATGTA | 58.550 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
4244 | 4525 | 4.285863 | TCAAAGTGGACAAAAAGGGATGT | 58.714 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
4245 | 4526 | 4.935352 | TCAAAGTGGACAAAAAGGGATG | 57.065 | 40.909 | 0.00 | 0.00 | 0.00 | 3.51 |
4246 | 4527 | 5.011023 | GTCATCAAAGTGGACAAAAAGGGAT | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4247 | 4528 | 4.340950 | GTCATCAAAGTGGACAAAAAGGGA | 59.659 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
4248 | 4529 | 4.099266 | TGTCATCAAAGTGGACAAAAAGGG | 59.901 | 41.667 | 0.00 | 0.00 | 38.50 | 3.95 |
4249 | 4530 | 5.261209 | TGTCATCAAAGTGGACAAAAAGG | 57.739 | 39.130 | 0.00 | 0.00 | 38.50 | 3.11 |
4254 | 4535 | 7.581213 | AAATACTTGTCATCAAAGTGGACAA | 57.419 | 32.000 | 0.00 | 0.00 | 46.09 | 3.18 |
4255 | 4536 | 7.519809 | CGAAAATACTTGTCATCAAAGTGGACA | 60.520 | 37.037 | 0.00 | 0.00 | 39.60 | 4.02 |
4256 | 4537 | 6.797033 | CGAAAATACTTGTCATCAAAGTGGAC | 59.203 | 38.462 | 0.00 | 0.00 | 32.87 | 4.02 |
4257 | 4538 | 6.072728 | CCGAAAATACTTGTCATCAAAGTGGA | 60.073 | 38.462 | 0.00 | 0.00 | 32.87 | 4.02 |
4258 | 4539 | 6.072728 | TCCGAAAATACTTGTCATCAAAGTGG | 60.073 | 38.462 | 0.00 | 0.00 | 32.87 | 4.00 |
4259 | 4540 | 6.797033 | GTCCGAAAATACTTGTCATCAAAGTG | 59.203 | 38.462 | 0.00 | 0.00 | 32.87 | 3.16 |
4260 | 4541 | 6.347402 | CGTCCGAAAATACTTGTCATCAAAGT | 60.347 | 38.462 | 0.00 | 0.00 | 32.87 | 2.66 |
4261 | 4542 | 6.015504 | CGTCCGAAAATACTTGTCATCAAAG | 58.984 | 40.000 | 0.00 | 0.00 | 32.87 | 2.77 |
4262 | 4543 | 5.106869 | CCGTCCGAAAATACTTGTCATCAAA | 60.107 | 40.000 | 0.00 | 0.00 | 32.87 | 2.69 |
4263 | 4544 | 4.390603 | CCGTCCGAAAATACTTGTCATCAA | 59.609 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
4264 | 4545 | 3.930229 | CCGTCCGAAAATACTTGTCATCA | 59.070 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
4265 | 4546 | 4.178540 | TCCGTCCGAAAATACTTGTCATC | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
4266 | 4547 | 4.181578 | CTCCGTCCGAAAATACTTGTCAT | 58.818 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
4267 | 4548 | 3.581755 | CTCCGTCCGAAAATACTTGTCA | 58.418 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
4268 | 4549 | 2.928116 | CCTCCGTCCGAAAATACTTGTC | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4269 | 4550 | 2.354403 | CCCTCCGTCCGAAAATACTTGT | 60.354 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4270 | 4551 | 2.093869 | TCCCTCCGTCCGAAAATACTTG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4271 | 4552 | 2.167900 | CTCCCTCCGTCCGAAAATACTT | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4272 | 4553 | 1.755380 | CTCCCTCCGTCCGAAAATACT | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
4273 | 4554 | 1.479730 | ACTCCCTCCGTCCGAAAATAC | 59.520 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
4274 | 4555 | 1.856629 | ACTCCCTCCGTCCGAAAATA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4275 | 4556 | 1.856629 | TACTCCCTCCGTCCGAAAAT | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4276 | 4557 | 1.753073 | GATACTCCCTCCGTCCGAAAA | 59.247 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
4277 | 4558 | 1.064166 | AGATACTCCCTCCGTCCGAAA | 60.064 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
4278 | 4559 | 0.549950 | AGATACTCCCTCCGTCCGAA | 59.450 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4279 | 4560 | 0.179026 | CAGATACTCCCTCCGTCCGA | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.55 |
4280 | 4561 | 0.179026 | TCAGATACTCCCTCCGTCCG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4281 | 4562 | 2.296073 | ATCAGATACTCCCTCCGTCC | 57.704 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4282 | 4563 | 4.400120 | AGTTATCAGATACTCCCTCCGTC | 58.600 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
4283 | 4564 | 4.456662 | AGTTATCAGATACTCCCTCCGT | 57.543 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
4284 | 4565 | 5.562635 | ACTAGTTATCAGATACTCCCTCCG | 58.437 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
4285 | 4566 | 8.165397 | AGTTACTAGTTATCAGATACTCCCTCC | 58.835 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
4339 | 4622 | 0.404040 | AGCAATTTGGAACGGAGGGA | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4340 | 4623 | 0.811281 | GAGCAATTTGGAACGGAGGG | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4341 | 4624 | 0.447801 | CGAGCAATTTGGAACGGAGG | 59.552 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4342 | 4625 | 1.128692 | GACGAGCAATTTGGAACGGAG | 59.871 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
4343 | 4626 | 1.153353 | GACGAGCAATTTGGAACGGA | 58.847 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4344 | 4627 | 0.179225 | CGACGAGCAATTTGGAACGG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
4345 | 4628 | 3.274196 | CGACGAGCAATTTGGAACG | 57.726 | 52.632 | 0.00 | 0.00 | 0.00 | 3.95 |
4357 | 4640 | 1.645034 | ACATCCATTTCTGCGACGAG | 58.355 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4358 | 4641 | 2.951457 | TACATCCATTTCTGCGACGA | 57.049 | 45.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4359 | 4642 | 3.384668 | AGATACATCCATTTCTGCGACG | 58.615 | 45.455 | 0.00 | 0.00 | 0.00 | 5.12 |
4360 | 4643 | 5.773575 | TCTAGATACATCCATTTCTGCGAC | 58.226 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
4361 | 4644 | 6.435591 | AGATCTAGATACATCCATTTCTGCGA | 59.564 | 38.462 | 4.89 | 0.00 | 0.00 | 5.10 |
4362 | 4645 | 6.629128 | AGATCTAGATACATCCATTTCTGCG | 58.371 | 40.000 | 4.89 | 0.00 | 0.00 | 5.18 |
4363 | 4646 | 9.935241 | TTTAGATCTAGATACATCCATTTCTGC | 57.065 | 33.333 | 4.89 | 0.00 | 0.00 | 4.26 |
4389 | 4672 | 8.700051 | GCAGGTATGGATGTATCTAGATGTATT | 58.300 | 37.037 | 15.79 | 0.00 | 0.00 | 1.89 |
4390 | 4673 | 7.013750 | CGCAGGTATGGATGTATCTAGATGTAT | 59.986 | 40.741 | 15.79 | 9.11 | 0.00 | 2.29 |
4391 | 4674 | 6.318900 | CGCAGGTATGGATGTATCTAGATGTA | 59.681 | 42.308 | 15.79 | 4.44 | 0.00 | 2.29 |
4392 | 4675 | 5.126222 | CGCAGGTATGGATGTATCTAGATGT | 59.874 | 44.000 | 15.79 | 1.25 | 0.00 | 3.06 |
4393 | 4676 | 5.358160 | TCGCAGGTATGGATGTATCTAGATG | 59.642 | 44.000 | 15.79 | 0.00 | 0.00 | 2.90 |
4394 | 4677 | 5.358442 | GTCGCAGGTATGGATGTATCTAGAT | 59.642 | 44.000 | 10.73 | 10.73 | 0.00 | 1.98 |
4395 | 4678 | 4.700692 | GTCGCAGGTATGGATGTATCTAGA | 59.299 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
4396 | 4679 | 4.459337 | TGTCGCAGGTATGGATGTATCTAG | 59.541 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
4397 | 4680 | 4.403734 | TGTCGCAGGTATGGATGTATCTA | 58.596 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
4398 | 4681 | 3.230976 | TGTCGCAGGTATGGATGTATCT | 58.769 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
4399 | 4682 | 3.660501 | TGTCGCAGGTATGGATGTATC | 57.339 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
4400 | 4683 | 3.388024 | ACTTGTCGCAGGTATGGATGTAT | 59.612 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
4401 | 4684 | 2.764010 | ACTTGTCGCAGGTATGGATGTA | 59.236 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
4402 | 4685 | 1.555075 | ACTTGTCGCAGGTATGGATGT | 59.445 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
4403 | 4686 | 2.315925 | ACTTGTCGCAGGTATGGATG | 57.684 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4404 | 4687 | 4.689612 | ATTACTTGTCGCAGGTATGGAT | 57.310 | 40.909 | 3.46 | 0.00 | 0.00 | 3.41 |
4405 | 4688 | 4.439057 | GAATTACTTGTCGCAGGTATGGA | 58.561 | 43.478 | 3.46 | 0.00 | 0.00 | 3.41 |
4406 | 4689 | 3.245284 | CGAATTACTTGTCGCAGGTATGG | 59.755 | 47.826 | 3.46 | 0.00 | 0.00 | 2.74 |
4407 | 4690 | 3.245284 | CCGAATTACTTGTCGCAGGTATG | 59.755 | 47.826 | 3.46 | 0.00 | 35.93 | 2.39 |
4408 | 4691 | 3.131577 | TCCGAATTACTTGTCGCAGGTAT | 59.868 | 43.478 | 3.46 | 0.00 | 35.93 | 2.73 |
4409 | 4692 | 2.492881 | TCCGAATTACTTGTCGCAGGTA | 59.507 | 45.455 | 0.00 | 0.00 | 35.93 | 3.08 |
4410 | 4693 | 1.274167 | TCCGAATTACTTGTCGCAGGT | 59.726 | 47.619 | 0.00 | 0.91 | 35.93 | 4.00 |
4411 | 4694 | 2.004583 | TCCGAATTACTTGTCGCAGG | 57.995 | 50.000 | 0.00 | 0.00 | 35.93 | 4.85 |
4412 | 4695 | 2.222508 | CGTTCCGAATTACTTGTCGCAG | 60.223 | 50.000 | 0.00 | 0.00 | 35.93 | 5.18 |
4413 | 4696 | 1.722464 | CGTTCCGAATTACTTGTCGCA | 59.278 | 47.619 | 0.00 | 0.00 | 35.93 | 5.10 |
4414 | 4697 | 1.060122 | CCGTTCCGAATTACTTGTCGC | 59.940 | 52.381 | 0.00 | 0.00 | 35.93 | 5.19 |
4415 | 4698 | 2.597305 | CTCCGTTCCGAATTACTTGTCG | 59.403 | 50.000 | 0.00 | 0.00 | 37.01 | 4.35 |
4416 | 4699 | 2.928116 | CCTCCGTTCCGAATTACTTGTC | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4417 | 4700 | 2.354403 | CCCTCCGTTCCGAATTACTTGT | 60.354 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4418 | 4701 | 2.093869 | TCCCTCCGTTCCGAATTACTTG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4419 | 4702 | 2.167900 | CTCCCTCCGTTCCGAATTACTT | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4420 | 4703 | 1.755380 | CTCCCTCCGTTCCGAATTACT | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
4421 | 4704 | 1.479730 | ACTCCCTCCGTTCCGAATTAC | 59.520 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
4422 | 4705 | 1.856629 | ACTCCCTCCGTTCCGAATTA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4423 | 4706 | 1.479730 | GTACTCCCTCCGTTCCGAATT | 59.520 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
4424 | 4707 | 1.109609 | GTACTCCCTCCGTTCCGAAT | 58.890 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4425 | 4708 | 0.251297 | TGTACTCCCTCCGTTCCGAA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4426 | 4709 | 0.033796 | ATGTACTCCCTCCGTTCCGA | 60.034 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
4427 | 4710 | 0.102481 | CATGTACTCCCTCCGTTCCG | 59.898 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4428 | 4711 | 1.136500 | GTCATGTACTCCCTCCGTTCC | 59.864 | 57.143 | 0.00 | 0.00 | 0.00 | 3.62 |
4429 | 4712 | 1.822990 | TGTCATGTACTCCCTCCGTTC | 59.177 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
4430 | 4713 | 1.825474 | CTGTCATGTACTCCCTCCGTT | 59.175 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
4431 | 4714 | 1.475403 | CTGTCATGTACTCCCTCCGT | 58.525 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4432 | 4715 | 0.747255 | CCTGTCATGTACTCCCTCCG | 59.253 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4433 | 4716 | 1.123928 | CCCTGTCATGTACTCCCTCC | 58.876 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4434 | 4717 | 1.867363 | ACCCTGTCATGTACTCCCTC | 58.133 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4435 | 4718 | 2.188817 | GAACCCTGTCATGTACTCCCT | 58.811 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
4436 | 4719 | 1.209747 | GGAACCCTGTCATGTACTCCC | 59.790 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
4437 | 4720 | 2.188817 | AGGAACCCTGTCATGTACTCC | 58.811 | 52.381 | 0.00 | 0.00 | 29.57 | 3.85 |
4438 | 4721 | 4.141914 | CCTTAGGAACCCTGTCATGTACTC | 60.142 | 50.000 | 0.00 | 0.00 | 34.61 | 2.59 |
4439 | 4722 | 3.775316 | CCTTAGGAACCCTGTCATGTACT | 59.225 | 47.826 | 0.00 | 0.00 | 34.61 | 2.73 |
4440 | 4723 | 3.773119 | TCCTTAGGAACCCTGTCATGTAC | 59.227 | 47.826 | 0.00 | 0.00 | 34.61 | 2.90 |
4441 | 4724 | 4.069312 | TCCTTAGGAACCCTGTCATGTA | 57.931 | 45.455 | 0.00 | 0.00 | 34.61 | 2.29 |
4556 | 4839 | 1.679139 | CAAGGAGTGCACAACCAAGA | 58.321 | 50.000 | 26.67 | 0.00 | 0.00 | 3.02 |
4567 | 4850 | 1.334869 | GTTCCAACTGTGCAAGGAGTG | 59.665 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
4603 | 4886 | 4.439426 | CCAAGTTCGACAAAACCATGTGAA | 60.439 | 41.667 | 0.00 | 0.00 | 32.57 | 3.18 |
4722 | 5005 | 7.724305 | TTCTAAATCTTACAAGTTCGCAAGT | 57.276 | 32.000 | 0.00 | 0.00 | 39.48 | 3.16 |
4883 | 5166 | 8.737168 | TCACTGAGATCTGTAAATTTAATGGG | 57.263 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
4944 | 5227 | 3.195610 | TCTGGATGTTTGCGACTGATACT | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
5155 | 5438 | 4.654091 | ACAAACCTGAAAACCACATCAG | 57.346 | 40.909 | 0.00 | 0.00 | 42.15 | 2.90 |
5272 | 5555 | 6.708054 | CCTTCTCCACATACCTTCAATCATAC | 59.292 | 42.308 | 0.00 | 0.00 | 0.00 | 2.39 |
5320 | 5603 | 4.644685 | GCATCCAGAATTACTTTGGCCTTA | 59.355 | 41.667 | 3.32 | 0.00 | 31.94 | 2.69 |
5711 | 5994 | 0.179032 | ATCGGTTGCACACCTTCACA | 60.179 | 50.000 | 13.76 | 0.00 | 44.69 | 3.58 |
5746 | 6029 | 9.585099 | TTTACCTGAAATGATAATGTGAATTGC | 57.415 | 29.630 | 0.00 | 0.00 | 0.00 | 3.56 |
5752 | 6035 | 7.981225 | CCCCTTTTTACCTGAAATGATAATGTG | 59.019 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
5838 | 6121 | 0.677288 | TCTTCGGAACACCGTGATGT | 59.323 | 50.000 | 5.28 | 0.00 | 45.96 | 3.06 |
5941 | 6224 | 2.024414 | GAACCACAACAAGCCTGAACT | 58.976 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
6148 | 6462 | 2.574955 | GGTCGAGGCACTGTCACCT | 61.575 | 63.158 | 0.00 | 0.00 | 41.55 | 4.00 |
6151 | 6465 | 3.680786 | CCGGTCGAGGCACTGTCA | 61.681 | 66.667 | 0.00 | 0.00 | 41.55 | 3.58 |
6188 | 6520 | 3.493350 | CGTTGATGATTCCTAGGAGGTGG | 60.493 | 52.174 | 12.26 | 0.00 | 36.53 | 4.61 |
6217 | 6554 | 1.064758 | AGTGTCAAACCTTGTCCAGCA | 60.065 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
6251 | 6588 | 6.590656 | TTGGTCAGACCCCATTTATTATCT | 57.409 | 37.500 | 17.59 | 0.00 | 37.50 | 1.98 |
6268 | 6605 | 1.228245 | GCCACCTTGAGCTTGGTCA | 60.228 | 57.895 | 3.40 | 0.00 | 33.75 | 4.02 |
6287 | 6624 | 2.361992 | TCAACCTCCCTCGCGCTA | 60.362 | 61.111 | 5.56 | 0.00 | 0.00 | 4.26 |
6288 | 6625 | 4.070552 | GTCAACCTCCCTCGCGCT | 62.071 | 66.667 | 5.56 | 0.00 | 0.00 | 5.92 |
6317 | 6658 | 6.114221 | ACGAGAAAGACAACGAAAATCAAA | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
6328 | 6669 | 3.553828 | AACCCTTGACGAGAAAGACAA | 57.446 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
6329 | 6670 | 3.202906 | CAAACCCTTGACGAGAAAGACA | 58.797 | 45.455 | 0.00 | 0.00 | 34.14 | 3.41 |
6348 | 6689 | 3.126703 | TTGAGAAGGGCGGCACCAA | 62.127 | 57.895 | 12.47 | 4.05 | 42.05 | 3.67 |
6374 | 6715 | 0.104855 | AATGCTCCAGAATAGCGCGA | 59.895 | 50.000 | 12.10 | 0.00 | 43.11 | 5.87 |
6428 | 6771 | 1.212935 | CAAACATAGGGAGGACCAGGG | 59.787 | 57.143 | 0.00 | 0.00 | 43.89 | 4.45 |
6439 | 6782 | 3.689161 | TCGTCCAAATGAGCAAACATAGG | 59.311 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
6466 | 6809 | 1.606994 | CGACGACTTCACCCCAATGAA | 60.607 | 52.381 | 0.00 | 0.00 | 37.08 | 2.57 |
6479 | 6822 | 1.215647 | GTTCCCATCAGCGACGACT | 59.784 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
6497 | 6840 | 9.188588 | GAACATAATGTAAAATGGATGCATCAG | 57.811 | 33.333 | 27.25 | 1.68 | 0.00 | 2.90 |
6499 | 6842 | 9.754382 | AAGAACATAATGTAAAATGGATGCATC | 57.246 | 29.630 | 18.81 | 18.81 | 0.00 | 3.91 |
6501 | 6844 | 9.941325 | AAAAGAACATAATGTAAAATGGATGCA | 57.059 | 25.926 | 0.00 | 0.00 | 0.00 | 3.96 |
6633 | 6977 | 6.946340 | ACTTTTTCAGGTCCAAAATTTCAGT | 58.054 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6680 | 7024 | 3.614092 | CAACAATCTAGGGCTGTGACAT | 58.386 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
6778 | 7469 | 7.680442 | TTGCCCTTTATTTAAAATTTGGAGC | 57.320 | 32.000 | 0.00 | 0.91 | 0.00 | 4.70 |
6853 | 7544 | 6.073819 | GCACAAAACCTTTGCCAAACTATAAG | 60.074 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.