Multiple sequence alignment - TraesCS7A01G245600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G245600 chr7A 100.000 2567 0 0 1 2567 223537442 223534876 0.000000e+00 4741.0
1 TraesCS7A01G245600 chr7A 79.504 766 143 12 839 1598 477815744 477816501 1.350000e-147 532.0
2 TraesCS7A01G245600 chr7A 91.892 333 27 0 504 836 226761811 226761479 1.390000e-127 466.0
3 TraesCS7A01G245600 chr7A 89.937 159 13 3 1936 2093 91619216 91619372 4.330000e-48 202.0
4 TraesCS7A01G245600 chr4D 89.020 847 78 8 1 836 327783764 327784606 0.000000e+00 1035.0
5 TraesCS7A01G245600 chr4D 90.213 470 40 5 1675 2140 14564668 14564201 2.180000e-170 608.0
6 TraesCS7A01G245600 chr4B 87.441 852 80 19 1 836 658798252 658797412 0.000000e+00 955.0
7 TraesCS7A01G245600 chr4B 84.877 853 94 24 1 836 609523499 609522665 0.000000e+00 828.0
8 TraesCS7A01G245600 chr1A 87.560 828 88 13 1 818 399466858 399467680 0.000000e+00 944.0
9 TraesCS7A01G245600 chr1A 84.387 775 97 23 74 839 107511065 107510306 0.000000e+00 739.0
10 TraesCS7A01G245600 chr5B 86.957 828 80 21 1 815 502836561 502837373 0.000000e+00 905.0
11 TraesCS7A01G245600 chr2D 85.158 822 107 13 1 817 574121987 574121176 0.000000e+00 828.0
12 TraesCS7A01G245600 chr2D 84.014 857 97 31 1 836 471900559 471901396 0.000000e+00 787.0
13 TraesCS7A01G245600 chr6B 83.195 845 115 18 9 836 134930269 134931103 0.000000e+00 749.0
14 TraesCS7A01G245600 chr6B 93.673 490 28 3 1653 2140 447657100 447657588 0.000000e+00 730.0
15 TraesCS7A01G245600 chr6B 93.233 399 8 4 1 398 15736748 15736368 1.030000e-158 569.0
16 TraesCS7A01G245600 chr6A 93.673 490 28 3 1653 2140 23382955 23382467 0.000000e+00 730.0
17 TraesCS7A01G245600 chrUn 92.873 463 33 0 1124 1586 293164201 293163739 0.000000e+00 673.0
18 TraesCS7A01G245600 chrUn 92.873 463 33 0 1124 1586 321307455 321307917 0.000000e+00 673.0
19 TraesCS7A01G245600 chr7D 92.723 426 25 5 2145 2567 211645030 211644608 6.070000e-171 610.0
20 TraesCS7A01G245600 chr7D 78.065 734 157 4 845 1576 423400663 423399932 6.470000e-126 460.0
21 TraesCS7A01G245600 chr5A 80.658 760 135 12 839 1593 640696116 640696868 1.710000e-161 579.0
22 TraesCS7A01G245600 chr3B 80.501 759 137 11 839 1593 20804454 20805205 2.870000e-159 571.0
23 TraesCS7A01G245600 chr2B 79.974 759 146 6 839 1594 50454294 50455049 2.890000e-154 555.0
24 TraesCS7A01G245600 chr3D 79.101 756 146 8 845 1595 591226199 591226947 6.340000e-141 510.0
25 TraesCS7A01G245600 chr5D 78.788 759 153 6 845 1600 563749208 563749961 1.060000e-138 503.0
26 TraesCS7A01G245600 chr1D 92.593 189 13 1 1655 1842 131414183 131413995 1.170000e-68 270.0
27 TraesCS7A01G245600 chr1D 84.906 265 32 6 1857 2118 131413536 131413277 7.040000e-66 261.0
28 TraesCS7A01G245600 chr2A 90.698 43 4 0 1795 1837 97203519 97203561 9.920000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G245600 chr7A 223534876 223537442 2566 True 4741.0 4741 100.0000 1 2567 1 chr7A.!!$R1 2566
1 TraesCS7A01G245600 chr7A 477815744 477816501 757 False 532.0 532 79.5040 839 1598 1 chr7A.!!$F2 759
2 TraesCS7A01G245600 chr4D 327783764 327784606 842 False 1035.0 1035 89.0200 1 836 1 chr4D.!!$F1 835
3 TraesCS7A01G245600 chr4B 658797412 658798252 840 True 955.0 955 87.4410 1 836 1 chr4B.!!$R2 835
4 TraesCS7A01G245600 chr4B 609522665 609523499 834 True 828.0 828 84.8770 1 836 1 chr4B.!!$R1 835
5 TraesCS7A01G245600 chr1A 399466858 399467680 822 False 944.0 944 87.5600 1 818 1 chr1A.!!$F1 817
6 TraesCS7A01G245600 chr1A 107510306 107511065 759 True 739.0 739 84.3870 74 839 1 chr1A.!!$R1 765
7 TraesCS7A01G245600 chr5B 502836561 502837373 812 False 905.0 905 86.9570 1 815 1 chr5B.!!$F1 814
8 TraesCS7A01G245600 chr2D 574121176 574121987 811 True 828.0 828 85.1580 1 817 1 chr2D.!!$R1 816
9 TraesCS7A01G245600 chr2D 471900559 471901396 837 False 787.0 787 84.0140 1 836 1 chr2D.!!$F1 835
10 TraesCS7A01G245600 chr6B 134930269 134931103 834 False 749.0 749 83.1950 9 836 1 chr6B.!!$F1 827
11 TraesCS7A01G245600 chr7D 423399932 423400663 731 True 460.0 460 78.0650 845 1576 1 chr7D.!!$R2 731
12 TraesCS7A01G245600 chr5A 640696116 640696868 752 False 579.0 579 80.6580 839 1593 1 chr5A.!!$F1 754
13 TraesCS7A01G245600 chr3B 20804454 20805205 751 False 571.0 571 80.5010 839 1593 1 chr3B.!!$F1 754
14 TraesCS7A01G245600 chr2B 50454294 50455049 755 False 555.0 555 79.9740 839 1594 1 chr2B.!!$F1 755
15 TraesCS7A01G245600 chr3D 591226199 591226947 748 False 510.0 510 79.1010 845 1595 1 chr3D.!!$F1 750
16 TraesCS7A01G245600 chr5D 563749208 563749961 753 False 503.0 503 78.7880 845 1600 1 chr5D.!!$F1 755
17 TraesCS7A01G245600 chr1D 131413277 131414183 906 True 265.5 270 88.7495 1655 2118 2 chr1D.!!$R1 463

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
891 960 0.582005 GTCGAATATGGTCCTTGCGC 59.418 55.0 0.0 0.0 0.0 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2167 2687 0.037232 AGGCGAGCCACAACTACTTC 60.037 55.0 17.18 0.0 38.92 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 216 3.209410 CCAGGAAACCATGACTATCTGC 58.791 50.000 0.00 0.00 0.00 4.26
259 268 3.388024 GGCTCACTAGGGACATATTGTGA 59.612 47.826 0.00 0.00 34.04 3.58
673 739 2.264794 GGTGCTTGATCGGTCGGT 59.735 61.111 0.00 0.00 0.00 4.69
695 761 4.825546 ACGAGAAGAAGTTCGACTACAA 57.174 40.909 0.51 0.00 39.93 2.41
716 784 3.959943 ACAACCACGTTAACAAATGCTC 58.040 40.909 6.39 0.00 0.00 4.26
776 845 3.136763 CCATCTCGTTGCTATGCATCTT 58.863 45.455 0.19 0.00 38.76 2.40
836 905 2.350458 GCATGCCACGTTCCCCAAT 61.350 57.895 6.36 0.00 0.00 3.16
842 911 1.612199 GCCACGTTCCCCAATAGACAA 60.612 52.381 0.00 0.00 0.00 3.18
843 912 2.944094 GCCACGTTCCCCAATAGACAAT 60.944 50.000 0.00 0.00 0.00 2.71
870 939 4.611355 CGGGATTGCACGATTATGTTGATC 60.611 45.833 0.00 0.00 45.89 2.92
873 942 5.008019 GGATTGCACGATTATGTTGATCTGT 59.992 40.000 0.00 0.00 0.00 3.41
874 943 5.469373 TTGCACGATTATGTTGATCTGTC 57.531 39.130 0.00 0.00 0.00 3.51
876 945 3.796717 GCACGATTATGTTGATCTGTCGA 59.203 43.478 0.00 0.00 0.00 4.20
879 948 6.143919 GCACGATTATGTTGATCTGTCGAATA 59.856 38.462 0.00 0.00 0.00 1.75
888 957 4.948847 TGATCTGTCGAATATGGTCCTTG 58.051 43.478 0.00 0.00 0.00 3.61
891 960 0.582005 GTCGAATATGGTCCTTGCGC 59.418 55.000 0.00 0.00 0.00 6.09
906 975 3.850923 CGCTCGGACTTAACGCAA 58.149 55.556 0.00 0.00 0.00 4.85
916 985 1.975680 ACTTAACGCAAGGGAAGGAGA 59.024 47.619 2.79 0.00 46.39 3.71
921 990 1.544825 CGCAAGGGAAGGAGACTCCA 61.545 60.000 23.60 0.00 42.68 3.86
925 994 1.081277 GGGAAGGAGACTCCACCCT 59.919 63.158 32.27 14.53 45.46 4.34
936 1005 1.534476 TCCACCCTTGGCGACTACA 60.534 57.895 0.00 0.00 43.56 2.74
937 1006 1.375523 CCACCCTTGGCGACTACAC 60.376 63.158 0.00 0.00 35.56 2.90
939 1008 2.267961 CCCTTGGCGACTACACCC 59.732 66.667 0.00 0.00 0.00 4.61
948 1018 1.470098 GCGACTACACCCGACTTTCTA 59.530 52.381 0.00 0.00 0.00 2.10
951 1021 3.128242 CGACTACACCCGACTTTCTACAT 59.872 47.826 0.00 0.00 0.00 2.29
990 1060 5.883685 TGAATATGTGCAGGAGATTCTCT 57.116 39.130 13.22 0.00 0.00 3.10
1002 1072 6.479660 GCAGGAGATTCTCTACAGAAGAAATG 59.520 42.308 13.22 0.00 42.13 2.32
1024 1094 3.454719 TCAAAGGGAAGATGCCAATGA 57.545 42.857 0.00 0.00 0.00 2.57
1026 1096 3.702548 TCAAAGGGAAGATGCCAATGATG 59.297 43.478 0.00 0.00 0.00 3.07
1032 1102 1.982660 AGATGCCAATGATGCAGGAG 58.017 50.000 0.00 0.00 42.92 3.69
1045 1115 2.180862 CAGGAGGCGATCGTCGAGA 61.181 63.158 17.81 0.00 43.74 4.04
1052 1122 0.661780 GCGATCGTCGAGATTCCTGG 60.662 60.000 17.81 0.00 43.74 4.45
1055 1125 0.757188 ATCGTCGAGATTCCTGGCCT 60.757 55.000 3.32 0.00 35.73 5.19
1057 1127 1.144936 GTCGAGATTCCTGGCCTGG 59.855 63.158 22.36 22.36 0.00 4.45
1061 1131 2.215451 GAGATTCCTGGCCTGGGCAA 62.215 60.000 26.94 15.99 44.11 4.52
1069 1139 1.305213 GGCCTGGGCAATCCTTTGA 60.305 57.895 16.34 0.00 44.11 2.69
1131 1201 0.679002 ATGGAGCGTTCATGCAAGCT 60.679 50.000 5.38 5.38 43.33 3.74
1165 1235 2.293122 GCGGCTGGTATGATATTGCAAA 59.707 45.455 1.71 0.00 0.00 3.68
1167 1237 3.058016 CGGCTGGTATGATATTGCAAAGG 60.058 47.826 1.71 0.00 0.00 3.11
1185 1255 1.567649 AGGCATGATGGGAGTGTGATT 59.432 47.619 0.00 0.00 0.00 2.57
1194 1264 1.134694 GAGTGTGATTTTCGCGGCC 59.865 57.895 6.13 0.00 0.00 6.13
1199 1269 0.800012 GTGATTTTCGCGGCCTACAA 59.200 50.000 6.13 0.00 0.00 2.41
1218 1288 7.331687 GCCTACAAATGCATTTTCAACTGTAAT 59.668 33.333 21.95 0.00 0.00 1.89
1224 1294 4.225984 GCATTTTCAACTGTAATGACGCA 58.774 39.130 5.44 0.00 32.36 5.24
1287 1357 1.078848 CCTGCAGCACTGTACCCTC 60.079 63.158 8.66 0.00 0.00 4.30
1298 1368 2.903855 TACCCTCCCGATCGTCGC 60.904 66.667 15.09 0.00 38.82 5.19
1329 1399 2.997315 TCAGTGGCACTAGCGGCT 60.997 61.111 21.59 7.98 43.41 5.52
1348 1418 3.196685 GGCTATGACTGGGGATAGCTTAG 59.803 52.174 0.00 0.00 44.39 2.18
1353 1423 1.062121 ACTGGGGATAGCTTAGCCAGA 60.062 52.381 11.65 0.00 35.47 3.86
1368 1438 0.597637 CCAGATCGGCGTATGGACAC 60.598 60.000 18.33 0.00 34.60 3.67
1377 1447 2.382519 GCGTATGGACACTTAGTAGCG 58.617 52.381 0.00 0.00 0.00 4.26
1386 1456 3.276857 ACACTTAGTAGCGGAGATTCGA 58.723 45.455 0.00 0.00 0.00 3.71
1484 1554 7.703621 GGCATTGTATAGTCGTACAGAAAGTAA 59.296 37.037 0.00 0.00 36.08 2.24
1488 1558 8.970691 TGTATAGTCGTACAGAAAGTAAAACC 57.029 34.615 0.00 0.00 33.72 3.27
1498 1568 5.824097 ACAGAAAGTAAAACCGTTGTATGGT 59.176 36.000 0.00 0.00 39.71 3.55
1500 1570 6.854381 CAGAAAGTAAAACCGTTGTATGGTTC 59.146 38.462 3.92 0.00 46.25 3.62
1506 1576 2.945447 CCGTTGTATGGTTCGGTAGA 57.055 50.000 0.00 0.00 38.45 2.59
1520 1590 2.643933 GGTAGAAGTCCACCGTGTAC 57.356 55.000 0.00 0.00 0.00 2.90
1536 1606 0.036294 GTACTGAGGAGTTGGTGCCC 60.036 60.000 0.00 0.00 33.21 5.36
1539 1609 2.352805 GAGGAGTTGGTGCCCCTG 59.647 66.667 0.00 0.00 0.00 4.45
1553 1626 2.856231 TGCCCCTGGATTGTAACCTTAT 59.144 45.455 0.00 0.00 0.00 1.73
1556 1629 3.181433 CCCCTGGATTGTAACCTTATCCC 60.181 52.174 0.00 0.00 37.60 3.85
1561 1634 6.272324 CCTGGATTGTAACCTTATCCCTATGA 59.728 42.308 0.00 0.00 37.60 2.15
1586 1659 9.860898 GAAATAAAACTCTCTTACCATTGCAAT 57.139 29.630 5.99 5.99 0.00 3.56
1587 1660 9.643693 AAATAAAACTCTCTTACCATTGCAATG 57.356 29.630 28.91 28.91 36.17 2.82
1616 1689 9.439500 AAATAAAATACAATGAGCAATGCAAGT 57.561 25.926 8.35 0.70 0.00 3.16
1617 1690 9.439500 AATAAAATACAATGAGCAATGCAAGTT 57.561 25.926 8.35 0.00 0.00 2.66
1619 1692 7.816945 AAATACAATGAGCAATGCAAGTTAC 57.183 32.000 8.35 0.00 0.00 2.50
1620 1693 6.764308 ATACAATGAGCAATGCAAGTTACT 57.236 33.333 8.35 0.00 0.00 2.24
1621 1694 5.458041 ACAATGAGCAATGCAAGTTACTT 57.542 34.783 8.35 0.00 0.00 2.24
1622 1695 5.224888 ACAATGAGCAATGCAAGTTACTTG 58.775 37.500 19.66 19.66 43.57 3.16
1623 1696 5.009911 ACAATGAGCAATGCAAGTTACTTGA 59.990 36.000 26.94 13.21 43.42 3.02
1624 1697 4.754372 TGAGCAATGCAAGTTACTTGAG 57.246 40.909 26.94 14.14 43.42 3.02
1625 1698 4.136796 TGAGCAATGCAAGTTACTTGAGT 58.863 39.130 26.94 12.23 43.42 3.41
1626 1699 4.580167 TGAGCAATGCAAGTTACTTGAGTT 59.420 37.500 26.94 16.90 43.42 3.01
1627 1700 5.067674 TGAGCAATGCAAGTTACTTGAGTTT 59.932 36.000 26.94 13.79 43.42 2.66
1628 1701 5.906073 AGCAATGCAAGTTACTTGAGTTTT 58.094 33.333 26.94 11.60 43.42 2.43
1629 1702 6.340522 AGCAATGCAAGTTACTTGAGTTTTT 58.659 32.000 26.94 10.05 43.42 1.94
1669 1742 1.070786 TGGGCGTGTTCTGAACTCC 59.929 57.895 20.18 16.82 0.00 3.85
1690 1763 1.068121 CCCAACTCTCCCAACTCCTT 58.932 55.000 0.00 0.00 0.00 3.36
1701 1774 3.333680 TCCCAACTCCTTAAATCCAGCTT 59.666 43.478 0.00 0.00 0.00 3.74
1704 1777 3.653835 ACTCCTTAAATCCAGCTTCCC 57.346 47.619 0.00 0.00 0.00 3.97
1735 1808 5.064707 GCTTCCAACTTCACATAGCGATTTA 59.935 40.000 0.00 0.00 0.00 1.40
1741 1814 4.750098 ACTTCACATAGCGATTTAATCCCG 59.250 41.667 0.00 0.00 0.00 5.14
1745 1818 3.739300 ACATAGCGATTTAATCCCGTTCG 59.261 43.478 0.00 0.00 0.00 3.95
1769 1842 1.472376 GCCACGCTAGCTTCTCTCATT 60.472 52.381 13.93 0.00 0.00 2.57
1772 1845 1.216122 CGCTAGCTTCTCTCATTGCC 58.784 55.000 13.93 0.00 0.00 4.52
1775 1848 2.354199 GCTAGCTTCTCTCATTGCCAAC 59.646 50.000 7.70 0.00 0.00 3.77
1779 1853 2.159282 GCTTCTCTCATTGCCAACATGG 60.159 50.000 0.00 0.00 41.55 3.66
1842 1916 3.492102 GCTAGAACCAGCCCATAATGA 57.508 47.619 0.00 0.00 35.40 2.57
1844 1918 2.355010 AGAACCAGCCCATAATGAGC 57.645 50.000 0.00 0.00 0.00 4.26
1845 1919 1.565759 AGAACCAGCCCATAATGAGCA 59.434 47.619 0.00 0.00 0.00 4.26
1846 1920 1.952296 GAACCAGCCCATAATGAGCAG 59.048 52.381 0.00 0.00 0.00 4.24
1847 1921 0.184451 ACCAGCCCATAATGAGCAGG 59.816 55.000 0.00 0.00 38.97 4.85
1848 1922 1.177256 CCAGCCCATAATGAGCAGGC 61.177 60.000 0.00 0.00 44.20 4.85
1849 1923 4.916358 GCCCATAATGAGCAGGCT 57.084 55.556 0.00 0.00 40.57 4.58
1850 1924 2.638744 GCCCATAATGAGCAGGCTC 58.361 57.895 14.20 14.20 40.57 4.70
1851 1925 1.233285 GCCCATAATGAGCAGGCTCG 61.233 60.000 15.83 1.96 45.48 5.03
1852 1926 0.394192 CCCATAATGAGCAGGCTCGA 59.606 55.000 15.83 6.38 45.48 4.04
1853 1927 1.607509 CCCATAATGAGCAGGCTCGAG 60.608 57.143 15.83 8.45 45.48 4.04
1854 1928 1.342496 CCATAATGAGCAGGCTCGAGA 59.658 52.381 18.75 4.33 45.48 4.04
1855 1929 2.609984 CCATAATGAGCAGGCTCGAGAG 60.610 54.545 18.75 6.09 45.48 3.20
1865 2383 1.739049 GCTCGAGAGATGAGGGGTG 59.261 63.158 18.75 0.00 40.84 4.61
1874 2392 2.028125 GATGAGGGGTGCCGATTCGA 62.028 60.000 7.83 0.00 0.00 3.71
1876 2394 1.301009 GAGGGGTGCCGATTCGATC 60.301 63.158 7.83 0.00 0.00 3.69
1909 2429 0.177141 CCGCTTCGAGGGGTCATTTA 59.823 55.000 10.68 0.00 42.78 1.40
1915 2435 5.552178 GCTTCGAGGGGTCATTTATCTATT 58.448 41.667 0.00 0.00 0.00 1.73
1919 2439 5.839063 TCGAGGGGTCATTTATCTATTGAGT 59.161 40.000 0.00 0.00 0.00 3.41
1927 2447 4.706842 TTTATCTATTGAGTGAGGGGGC 57.293 45.455 0.00 0.00 0.00 5.80
1928 2448 2.196742 ATCTATTGAGTGAGGGGGCA 57.803 50.000 0.00 0.00 0.00 5.36
1949 2469 4.426416 CATCGAACCGGTATGTAACTTGA 58.574 43.478 8.00 0.00 0.00 3.02
1950 2470 4.724074 TCGAACCGGTATGTAACTTGAT 57.276 40.909 8.00 0.00 0.00 2.57
1952 2472 4.158209 TCGAACCGGTATGTAACTTGATGA 59.842 41.667 8.00 0.00 0.00 2.92
1971 2491 3.544684 TGATGGCAGATCGCTGTAAATT 58.455 40.909 8.94 0.00 44.17 1.82
1973 2493 4.751600 TGATGGCAGATCGCTGTAAATTAG 59.248 41.667 8.94 0.00 44.17 1.73
1995 2515 1.871676 GGAACTCCCAACTTCACGTTC 59.128 52.381 0.00 0.00 32.27 3.95
2032 2552 1.586154 CGGGCTCCTCGTTTTTGCAT 61.586 55.000 0.00 0.00 0.00 3.96
2037 2557 2.158841 GCTCCTCGTTTTTGCATTACGA 59.841 45.455 14.88 14.88 41.47 3.43
2038 2558 3.181510 GCTCCTCGTTTTTGCATTACGAT 60.182 43.478 15.69 0.00 42.59 3.73
2040 2560 3.372822 TCCTCGTTTTTGCATTACGATCC 59.627 43.478 15.69 0.00 42.59 3.36
2050 2570 2.329379 CATTACGATCCGGCTAGCTTC 58.671 52.381 15.72 6.11 0.00 3.86
2097 2617 1.472480 CCGTCCGGCTCAAAATCATTT 59.528 47.619 0.00 0.00 0.00 2.32
2098 2618 2.680841 CCGTCCGGCTCAAAATCATTTA 59.319 45.455 0.00 0.00 0.00 1.40
2100 2620 4.513692 CCGTCCGGCTCAAAATCATTTATA 59.486 41.667 0.00 0.00 0.00 0.98
2108 2628 7.201732 CGGCTCAAAATCATTTATAGAGTTGGT 60.202 37.037 8.24 0.00 0.00 3.67
2109 2629 7.917505 GGCTCAAAATCATTTATAGAGTTGGTG 59.082 37.037 8.24 0.00 0.00 4.17
2110 2630 8.677300 GCTCAAAATCATTTATAGAGTTGGTGA 58.323 33.333 8.24 0.00 0.00 4.02
2116 2636 7.921786 TCATTTATAGAGTTGGTGAAGTTGG 57.078 36.000 0.00 0.00 0.00 3.77
2117 2637 7.685481 TCATTTATAGAGTTGGTGAAGTTGGA 58.315 34.615 0.00 0.00 0.00 3.53
2118 2638 8.160765 TCATTTATAGAGTTGGTGAAGTTGGAA 58.839 33.333 0.00 0.00 0.00 3.53
2119 2639 7.979444 TTTATAGAGTTGGTGAAGTTGGAAG 57.021 36.000 0.00 0.00 0.00 3.46
2120 2640 2.576615 AGAGTTGGTGAAGTTGGAAGC 58.423 47.619 0.00 0.00 0.00 3.86
2121 2641 2.173569 AGAGTTGGTGAAGTTGGAAGCT 59.826 45.455 0.00 0.00 0.00 3.74
2122 2642 2.291741 GAGTTGGTGAAGTTGGAAGCTG 59.708 50.000 0.00 0.00 0.00 4.24
2123 2643 1.338020 GTTGGTGAAGTTGGAAGCTGG 59.662 52.381 0.00 0.00 0.00 4.85
2124 2644 0.843309 TGGTGAAGTTGGAAGCTGGA 59.157 50.000 0.00 0.00 0.00 3.86
2125 2645 1.202806 TGGTGAAGTTGGAAGCTGGAG 60.203 52.381 0.00 0.00 0.00 3.86
2126 2646 1.528129 GTGAAGTTGGAAGCTGGAGG 58.472 55.000 0.00 0.00 0.00 4.30
2127 2647 0.401738 TGAAGTTGGAAGCTGGAGGG 59.598 55.000 0.00 0.00 0.00 4.30
2128 2648 0.322906 GAAGTTGGAAGCTGGAGGGG 60.323 60.000 0.00 0.00 0.00 4.79
2129 2649 1.068352 AAGTTGGAAGCTGGAGGGGT 61.068 55.000 0.00 0.00 0.00 4.95
2130 2650 1.068352 AGTTGGAAGCTGGAGGGGTT 61.068 55.000 0.00 0.00 0.00 4.11
2131 2651 0.609406 GTTGGAAGCTGGAGGGGTTC 60.609 60.000 0.00 0.00 41.33 3.62
2132 2652 1.065410 TTGGAAGCTGGAGGGGTTCA 61.065 55.000 8.32 0.00 43.10 3.18
2133 2653 1.301293 GGAAGCTGGAGGGGTTCAG 59.699 63.158 8.32 0.00 43.10 3.02
2134 2654 1.201429 GGAAGCTGGAGGGGTTCAGA 61.201 60.000 8.32 0.00 43.10 3.27
2135 2655 0.693049 GAAGCTGGAGGGGTTCAGAA 59.307 55.000 0.00 0.00 41.58 3.02
2136 2656 0.402121 AAGCTGGAGGGGTTCAGAAC 59.598 55.000 4.52 4.52 33.11 3.01
2137 2657 0.768221 AGCTGGAGGGGTTCAGAACA 60.768 55.000 15.36 0.00 33.11 3.18
2138 2658 0.322008 GCTGGAGGGGTTCAGAACAG 60.322 60.000 15.36 3.96 33.11 3.16
2139 2659 0.326264 CTGGAGGGGTTCAGAACAGG 59.674 60.000 15.36 0.00 33.11 4.00
2140 2660 0.104672 TGGAGGGGTTCAGAACAGGA 60.105 55.000 15.36 0.00 0.00 3.86
2141 2661 1.064825 GGAGGGGTTCAGAACAGGAA 58.935 55.000 15.36 0.00 0.00 3.36
2142 2662 1.423921 GGAGGGGTTCAGAACAGGAAA 59.576 52.381 15.36 0.00 0.00 3.13
2143 2663 2.158519 GGAGGGGTTCAGAACAGGAAAA 60.159 50.000 15.36 0.00 0.00 2.29
2144 2664 3.562182 GAGGGGTTCAGAACAGGAAAAA 58.438 45.455 15.36 0.00 0.00 1.94
2145 2665 4.152647 GAGGGGTTCAGAACAGGAAAAAT 58.847 43.478 15.36 0.00 0.00 1.82
2146 2666 3.897505 AGGGGTTCAGAACAGGAAAAATG 59.102 43.478 15.36 0.00 0.00 2.32
2147 2667 3.554960 GGGGTTCAGAACAGGAAAAATGC 60.555 47.826 15.36 0.00 0.00 3.56
2148 2668 3.554960 GGGTTCAGAACAGGAAAAATGCC 60.555 47.826 15.36 0.00 0.00 4.40
2149 2669 3.321968 GGTTCAGAACAGGAAAAATGCCT 59.678 43.478 15.36 0.00 35.75 4.75
2150 2670 4.550422 GTTCAGAACAGGAAAAATGCCTC 58.450 43.478 8.54 0.00 32.12 4.70
2151 2671 3.831323 TCAGAACAGGAAAAATGCCTCA 58.169 40.909 0.00 0.00 32.12 3.86
2152 2672 3.569701 TCAGAACAGGAAAAATGCCTCAC 59.430 43.478 0.00 0.00 32.12 3.51
2153 2673 3.318839 CAGAACAGGAAAAATGCCTCACA 59.681 43.478 0.00 0.00 32.12 3.58
2154 2674 3.960102 AGAACAGGAAAAATGCCTCACAA 59.040 39.130 0.00 0.00 32.12 3.33
2155 2675 4.405358 AGAACAGGAAAAATGCCTCACAAA 59.595 37.500 0.00 0.00 32.12 2.83
2156 2676 4.058721 ACAGGAAAAATGCCTCACAAAC 57.941 40.909 0.00 0.00 32.12 2.93
2157 2677 3.450457 ACAGGAAAAATGCCTCACAAACA 59.550 39.130 0.00 0.00 32.12 2.83
2158 2678 4.101430 ACAGGAAAAATGCCTCACAAACAT 59.899 37.500 0.00 0.00 32.12 2.71
2159 2679 5.304101 ACAGGAAAAATGCCTCACAAACATA 59.696 36.000 0.00 0.00 32.12 2.29
2160 2680 5.634859 CAGGAAAAATGCCTCACAAACATAC 59.365 40.000 0.00 0.00 32.12 2.39
2161 2681 5.304101 AGGAAAAATGCCTCACAAACATACA 59.696 36.000 0.00 0.00 0.00 2.29
2162 2682 5.405269 GGAAAAATGCCTCACAAACATACAC 59.595 40.000 0.00 0.00 0.00 2.90
2163 2683 5.528043 AAAATGCCTCACAAACATACACA 57.472 34.783 0.00 0.00 0.00 3.72
2164 2684 4.771590 AATGCCTCACAAACATACACAG 57.228 40.909 0.00 0.00 0.00 3.66
2165 2685 3.483808 TGCCTCACAAACATACACAGA 57.516 42.857 0.00 0.00 0.00 3.41
2166 2686 3.138304 TGCCTCACAAACATACACAGAC 58.862 45.455 0.00 0.00 0.00 3.51
2167 2687 2.157668 GCCTCACAAACATACACAGACG 59.842 50.000 0.00 0.00 0.00 4.18
2168 2688 3.649073 CCTCACAAACATACACAGACGA 58.351 45.455 0.00 0.00 0.00 4.20
2169 2689 4.055360 CCTCACAAACATACACAGACGAA 58.945 43.478 0.00 0.00 0.00 3.85
2170 2690 4.150627 CCTCACAAACATACACAGACGAAG 59.849 45.833 0.00 0.00 0.00 3.79
2183 2703 3.491581 ACGAAGTAGTTGTGGCTCG 57.508 52.632 0.00 0.00 41.94 5.03
2184 2704 0.666577 ACGAAGTAGTTGTGGCTCGC 60.667 55.000 0.00 0.00 41.94 5.03
2185 2705 1.352156 CGAAGTAGTTGTGGCTCGCC 61.352 60.000 0.00 0.00 0.00 5.54
2186 2706 0.037232 GAAGTAGTTGTGGCTCGCCT 60.037 55.000 9.65 0.00 36.94 5.52
2187 2707 0.037232 AAGTAGTTGTGGCTCGCCTC 60.037 55.000 9.65 6.27 36.94 4.70
2188 2708 1.805945 GTAGTTGTGGCTCGCCTCG 60.806 63.158 9.65 0.00 36.94 4.63
2189 2709 3.001902 TAGTTGTGGCTCGCCTCGG 62.002 63.158 9.65 0.00 36.94 4.63
2193 2713 3.917760 GTGGCTCGCCTCGGCTAT 61.918 66.667 9.65 0.00 39.32 2.97
2194 2714 2.203437 TGGCTCGCCTCGGCTATA 60.203 61.111 9.65 0.00 39.32 1.31
2195 2715 1.606601 TGGCTCGCCTCGGCTATAT 60.607 57.895 9.65 0.00 39.32 0.86
2196 2716 1.153745 GGCTCGCCTCGGCTATATG 60.154 63.158 6.35 0.00 39.32 1.78
2197 2717 1.807573 GCTCGCCTCGGCTATATGC 60.808 63.158 6.35 0.00 39.32 3.14
2198 2718 1.586541 CTCGCCTCGGCTATATGCA 59.413 57.895 6.35 0.00 45.15 3.96
2199 2719 0.038251 CTCGCCTCGGCTATATGCAA 60.038 55.000 6.35 0.00 45.15 4.08
2200 2720 0.608130 TCGCCTCGGCTATATGCAAT 59.392 50.000 6.35 0.00 45.15 3.56
2201 2721 0.723414 CGCCTCGGCTATATGCAATG 59.277 55.000 6.35 0.00 45.15 2.82
2202 2722 0.449388 GCCTCGGCTATATGCAATGC 59.551 55.000 0.00 0.00 45.15 3.56
2203 2723 0.723414 CCTCGGCTATATGCAATGCG 59.277 55.000 0.00 0.00 45.15 4.73
2204 2724 0.095935 CTCGGCTATATGCAATGCGC 59.904 55.000 0.00 0.00 45.15 6.09
2205 2725 1.225827 CGGCTATATGCAATGCGCG 60.226 57.895 0.00 0.00 46.97 6.86
2206 2726 1.135315 GGCTATATGCAATGCGCGG 59.865 57.895 8.83 0.00 46.97 6.46
2207 2727 1.135315 GCTATATGCAATGCGCGGG 59.865 57.895 8.83 0.00 46.97 6.13
2208 2728 1.135315 CTATATGCAATGCGCGGGC 59.865 57.895 18.81 18.81 46.97 6.13
2209 2729 2.257286 CTATATGCAATGCGCGGGCC 62.257 60.000 22.70 6.75 46.97 5.80
2222 2742 4.344865 GGGCCAGCGTTCCTTCCA 62.345 66.667 4.39 0.00 0.00 3.53
2223 2743 2.282180 GGCCAGCGTTCCTTCCAA 60.282 61.111 0.00 0.00 0.00 3.53
2224 2744 1.678970 GGCCAGCGTTCCTTCCAAT 60.679 57.895 0.00 0.00 0.00 3.16
2225 2745 1.250840 GGCCAGCGTTCCTTCCAATT 61.251 55.000 0.00 0.00 0.00 2.32
2226 2746 0.171231 GCCAGCGTTCCTTCCAATTC 59.829 55.000 0.00 0.00 0.00 2.17
2227 2747 0.447801 CCAGCGTTCCTTCCAATTCG 59.552 55.000 0.00 0.00 0.00 3.34
2228 2748 0.179189 CAGCGTTCCTTCCAATTCGC 60.179 55.000 0.00 0.00 43.16 4.70
2229 2749 0.321653 AGCGTTCCTTCCAATTCGCT 60.322 50.000 4.09 4.09 46.92 4.93
2230 2750 1.365699 GCGTTCCTTCCAATTCGCTA 58.634 50.000 0.00 0.00 40.39 4.26
2231 2751 1.327764 GCGTTCCTTCCAATTCGCTAG 59.672 52.381 0.00 0.00 40.39 3.42
2232 2752 2.888594 CGTTCCTTCCAATTCGCTAGA 58.111 47.619 0.00 0.00 0.00 2.43
2233 2753 3.259064 CGTTCCTTCCAATTCGCTAGAA 58.741 45.455 0.00 0.00 41.13 2.10
2234 2754 3.307242 CGTTCCTTCCAATTCGCTAGAAG 59.693 47.826 0.00 0.00 40.09 2.85
2235 2755 2.906354 TCCTTCCAATTCGCTAGAAGC 58.094 47.619 0.00 0.00 40.09 3.86
2236 2756 2.236146 TCCTTCCAATTCGCTAGAAGCA 59.764 45.455 0.00 0.00 42.58 3.91
2237 2757 3.009723 CCTTCCAATTCGCTAGAAGCAA 58.990 45.455 0.00 0.00 42.58 3.91
2238 2758 3.629398 CCTTCCAATTCGCTAGAAGCAAT 59.371 43.478 0.00 0.00 42.58 3.56
2239 2759 4.816385 CCTTCCAATTCGCTAGAAGCAATA 59.184 41.667 0.00 0.00 42.58 1.90
2240 2760 5.296780 CCTTCCAATTCGCTAGAAGCAATAA 59.703 40.000 0.00 0.00 42.58 1.40
2241 2761 6.183360 CCTTCCAATTCGCTAGAAGCAATAAA 60.183 38.462 0.00 0.00 42.58 1.40
2242 2762 6.942532 TCCAATTCGCTAGAAGCAATAAAT 57.057 33.333 0.00 0.00 42.58 1.40
2243 2763 8.445275 TTCCAATTCGCTAGAAGCAATAAATA 57.555 30.769 0.00 0.00 42.58 1.40
2244 2764 8.087982 TCCAATTCGCTAGAAGCAATAAATAG 57.912 34.615 0.00 0.00 42.58 1.73
2245 2765 7.931407 TCCAATTCGCTAGAAGCAATAAATAGA 59.069 33.333 0.00 0.00 42.58 1.98
2246 2766 8.226448 CCAATTCGCTAGAAGCAATAAATAGAG 58.774 37.037 0.00 0.00 42.58 2.43
2247 2767 7.897575 ATTCGCTAGAAGCAATAAATAGAGG 57.102 36.000 0.00 0.00 42.58 3.69
2248 2768 5.230942 TCGCTAGAAGCAATAAATAGAGGC 58.769 41.667 0.00 0.00 42.58 4.70
2249 2769 4.090642 CGCTAGAAGCAATAAATAGAGGCG 59.909 45.833 0.00 0.00 42.58 5.52
2250 2770 4.143009 GCTAGAAGCAATAAATAGAGGCGC 60.143 45.833 0.00 0.00 41.89 6.53
2251 2771 3.142174 AGAAGCAATAAATAGAGGCGCC 58.858 45.455 21.89 21.89 0.00 6.53
2252 2772 1.897560 AGCAATAAATAGAGGCGCCC 58.102 50.000 26.15 15.34 0.00 6.13
2253 2773 1.142870 AGCAATAAATAGAGGCGCCCA 59.857 47.619 26.15 9.51 0.00 5.36
2254 2774 2.162681 GCAATAAATAGAGGCGCCCAT 58.837 47.619 26.15 15.27 0.00 4.00
2255 2775 2.558359 GCAATAAATAGAGGCGCCCATT 59.442 45.455 26.15 17.51 0.00 3.16
2256 2776 3.366374 GCAATAAATAGAGGCGCCCATTC 60.366 47.826 26.15 15.21 0.00 2.67
2257 2777 2.561478 TAAATAGAGGCGCCCATTCC 57.439 50.000 26.15 7.58 0.00 3.01
2258 2778 0.178990 AAATAGAGGCGCCCATTCCC 60.179 55.000 26.15 5.60 0.00 3.97
2259 2779 1.352622 AATAGAGGCGCCCATTCCCA 61.353 55.000 26.15 5.65 0.00 4.37
2260 2780 1.136329 ATAGAGGCGCCCATTCCCAT 61.136 55.000 26.15 7.90 0.00 4.00
2261 2781 1.352622 TAGAGGCGCCCATTCCCATT 61.353 55.000 26.15 0.00 0.00 3.16
2262 2782 2.442643 AGGCGCCCATTCCCATTG 60.443 61.111 26.15 0.00 0.00 2.82
2263 2783 2.759560 GGCGCCCATTCCCATTGT 60.760 61.111 18.11 0.00 0.00 2.71
2264 2784 1.454847 GGCGCCCATTCCCATTGTA 60.455 57.895 18.11 0.00 0.00 2.41
2265 2785 1.733526 GCGCCCATTCCCATTGTAC 59.266 57.895 0.00 0.00 0.00 2.90
2266 2786 1.034838 GCGCCCATTCCCATTGTACA 61.035 55.000 0.00 0.00 0.00 2.90
2267 2787 1.691196 CGCCCATTCCCATTGTACAT 58.309 50.000 0.00 0.00 0.00 2.29
2268 2788 1.337703 CGCCCATTCCCATTGTACATG 59.662 52.381 0.00 0.00 0.00 3.21
2269 2789 2.665165 GCCCATTCCCATTGTACATGA 58.335 47.619 0.00 0.00 0.00 3.07
2270 2790 2.362077 GCCCATTCCCATTGTACATGAC 59.638 50.000 0.00 0.00 0.00 3.06
2271 2791 2.618241 CCCATTCCCATTGTACATGACG 59.382 50.000 0.00 0.00 0.00 4.35
2272 2792 2.033299 CCATTCCCATTGTACATGACGC 59.967 50.000 0.00 0.00 0.00 5.19
2273 2793 2.481289 TTCCCATTGTACATGACGCA 57.519 45.000 0.00 0.00 0.00 5.24
2274 2794 2.022764 TCCCATTGTACATGACGCAG 57.977 50.000 0.00 0.00 0.00 5.18
2275 2795 1.016627 CCCATTGTACATGACGCAGG 58.983 55.000 0.00 0.00 0.00 4.85
2276 2796 1.406751 CCCATTGTACATGACGCAGGA 60.407 52.381 0.00 0.00 0.00 3.86
2277 2797 2.355197 CCATTGTACATGACGCAGGAA 58.645 47.619 0.00 0.00 0.00 3.36
2278 2798 2.945008 CCATTGTACATGACGCAGGAAT 59.055 45.455 0.00 0.00 0.00 3.01
2279 2799 3.242837 CCATTGTACATGACGCAGGAATG 60.243 47.826 0.00 0.00 0.00 2.67
2280 2800 1.368641 TGTACATGACGCAGGAATGC 58.631 50.000 0.00 0.00 0.00 3.56
2281 2801 1.338579 TGTACATGACGCAGGAATGCA 60.339 47.619 0.00 0.00 34.41 3.96
2282 2802 1.328680 GTACATGACGCAGGAATGCAG 59.671 52.381 0.00 0.00 34.41 4.41
2283 2803 1.063649 CATGACGCAGGAATGCAGC 59.936 57.895 0.00 0.00 34.41 5.25
2284 2804 2.117156 ATGACGCAGGAATGCAGCC 61.117 57.895 0.00 0.00 34.41 4.85
2285 2805 2.747460 GACGCAGGAATGCAGCCA 60.747 61.111 10.65 0.00 34.41 4.75
2286 2806 2.044650 ACGCAGGAATGCAGCCAT 60.045 55.556 10.65 0.00 34.41 4.40
2287 2807 0.815213 GACGCAGGAATGCAGCCATA 60.815 55.000 10.65 0.00 34.41 2.74
2288 2808 0.394216 ACGCAGGAATGCAGCCATAA 60.394 50.000 10.65 0.00 34.41 1.90
2289 2809 0.956633 CGCAGGAATGCAGCCATAAT 59.043 50.000 10.65 0.00 34.41 1.28
2290 2810 2.153645 CGCAGGAATGCAGCCATAATA 58.846 47.619 10.65 0.00 34.41 0.98
2291 2811 2.553602 CGCAGGAATGCAGCCATAATAA 59.446 45.455 10.65 0.00 34.41 1.40
2292 2812 3.365666 CGCAGGAATGCAGCCATAATAAG 60.366 47.826 10.65 0.00 34.41 1.73
2293 2813 3.613432 GCAGGAATGCAGCCATAATAAGC 60.613 47.826 10.65 0.00 34.41 3.09
2294 2814 3.825014 CAGGAATGCAGCCATAATAAGCT 59.175 43.478 10.65 0.00 40.89 3.74
2295 2815 5.005740 CAGGAATGCAGCCATAATAAGCTA 58.994 41.667 10.65 0.00 37.18 3.32
2296 2816 5.123502 CAGGAATGCAGCCATAATAAGCTAG 59.876 44.000 10.65 0.00 37.18 3.42
2297 2817 5.006386 GGAATGCAGCCATAATAAGCTAGT 58.994 41.667 3.64 0.00 37.18 2.57
2298 2818 6.013379 AGGAATGCAGCCATAATAAGCTAGTA 60.013 38.462 10.65 0.00 37.18 1.82
2299 2819 6.314896 GGAATGCAGCCATAATAAGCTAGTAG 59.685 42.308 3.64 0.00 37.18 2.57
2300 2820 6.611613 ATGCAGCCATAATAAGCTAGTAGA 57.388 37.500 0.00 0.00 37.18 2.59
2301 2821 6.419484 TGCAGCCATAATAAGCTAGTAGAA 57.581 37.500 0.00 0.00 37.18 2.10
2302 2822 6.459066 TGCAGCCATAATAAGCTAGTAGAAG 58.541 40.000 0.00 0.00 37.18 2.85
2303 2823 6.267699 TGCAGCCATAATAAGCTAGTAGAAGA 59.732 38.462 0.00 0.00 37.18 2.87
2304 2824 7.155328 GCAGCCATAATAAGCTAGTAGAAGAA 58.845 38.462 0.00 0.00 37.18 2.52
2305 2825 7.657761 GCAGCCATAATAAGCTAGTAGAAGAAA 59.342 37.037 0.00 0.00 37.18 2.52
2306 2826 9.547753 CAGCCATAATAAGCTAGTAGAAGAAAA 57.452 33.333 0.00 0.00 37.18 2.29
2315 2835 8.803201 AAGCTAGTAGAAGAAAAACATTTTGC 57.197 30.769 0.00 0.00 0.00 3.68
2316 2836 7.940850 AGCTAGTAGAAGAAAAACATTTTGCA 58.059 30.769 0.00 0.00 0.00 4.08
2317 2837 8.413229 AGCTAGTAGAAGAAAAACATTTTGCAA 58.587 29.630 0.00 0.00 0.00 4.08
2318 2838 9.196552 GCTAGTAGAAGAAAAACATTTTGCAAT 57.803 29.630 0.00 0.00 0.00 3.56
2320 2840 7.854534 AGTAGAAGAAAAACATTTTGCAATGC 58.145 30.769 0.00 0.00 43.39 3.56
2321 2841 6.930667 AGAAGAAAAACATTTTGCAATGCT 57.069 29.167 6.82 0.00 43.39 3.79
2322 2842 8.977505 GTAGAAGAAAAACATTTTGCAATGCTA 58.022 29.630 6.82 0.00 43.39 3.49
2323 2843 7.854534 AGAAGAAAAACATTTTGCAATGCTAC 58.145 30.769 6.82 0.00 43.39 3.58
2324 2844 7.495279 AGAAGAAAAACATTTTGCAATGCTACA 59.505 29.630 6.82 0.00 43.39 2.74
2325 2845 7.733402 AGAAAAACATTTTGCAATGCTACAT 57.267 28.000 6.82 0.00 43.39 2.29
2326 2846 8.156994 AGAAAAACATTTTGCAATGCTACATT 57.843 26.923 6.82 0.00 43.39 2.71
2327 2847 8.623030 AGAAAAACATTTTGCAATGCTACATTT 58.377 25.926 6.82 0.00 43.39 2.32
2328 2848 8.563289 AAAAACATTTTGCAATGCTACATTTG 57.437 26.923 6.82 0.00 43.39 2.32
2329 2849 6.864360 AACATTTTGCAATGCTACATTTGT 57.136 29.167 6.82 0.30 43.39 2.83
2330 2850 6.864360 ACATTTTGCAATGCTACATTTGTT 57.136 29.167 6.82 0.00 43.39 2.83
2331 2851 7.261829 ACATTTTGCAATGCTACATTTGTTT 57.738 28.000 6.82 0.00 43.39 2.83
2332 2852 7.354257 ACATTTTGCAATGCTACATTTGTTTC 58.646 30.769 6.82 0.00 43.39 2.78
2333 2853 7.227116 ACATTTTGCAATGCTACATTTGTTTCT 59.773 29.630 6.82 0.00 43.39 2.52
2334 2854 7.551035 TTTTGCAATGCTACATTTGTTTCTT 57.449 28.000 6.82 0.00 0.00 2.52
2335 2855 6.528014 TTGCAATGCTACATTTGTTTCTTG 57.472 33.333 6.82 0.00 0.00 3.02
2336 2856 4.448395 TGCAATGCTACATTTGTTTCTTGC 59.552 37.500 6.82 0.00 37.54 4.01
2337 2857 4.433283 GCAATGCTACATTTGTTTCTTGCG 60.433 41.667 0.00 0.00 0.00 4.85
2338 2858 4.764679 ATGCTACATTTGTTTCTTGCGA 57.235 36.364 0.00 0.00 0.00 5.10
2339 2859 4.145876 TGCTACATTTGTTTCTTGCGAG 57.854 40.909 0.00 0.00 0.00 5.03
2340 2860 2.911102 GCTACATTTGTTTCTTGCGAGC 59.089 45.455 0.00 0.00 0.00 5.03
2341 2861 3.365364 GCTACATTTGTTTCTTGCGAGCT 60.365 43.478 0.00 0.00 0.00 4.09
2342 2862 3.715628 ACATTTGTTTCTTGCGAGCTT 57.284 38.095 0.00 0.00 0.00 3.74
2343 2863 4.045636 ACATTTGTTTCTTGCGAGCTTT 57.954 36.364 0.00 0.00 0.00 3.51
2344 2864 4.044426 ACATTTGTTTCTTGCGAGCTTTC 58.956 39.130 0.00 0.00 0.00 2.62
2345 2865 2.383298 TTGTTTCTTGCGAGCTTTCG 57.617 45.000 0.00 0.00 0.00 3.46
2346 2866 1.295792 TGTTTCTTGCGAGCTTTCGT 58.704 45.000 0.00 0.00 35.26 3.85
2347 2867 1.003972 TGTTTCTTGCGAGCTTTCGTG 60.004 47.619 0.00 0.00 35.26 4.35
2348 2868 0.041312 TTTCTTGCGAGCTTTCGTGC 60.041 50.000 0.00 0.00 35.26 5.34
2349 2869 2.158058 TTCTTGCGAGCTTTCGTGCG 62.158 55.000 0.00 0.00 38.13 5.34
2350 2870 2.657757 CTTGCGAGCTTTCGTGCGA 61.658 57.895 0.00 0.00 38.13 5.10
2351 2871 2.158058 CTTGCGAGCTTTCGTGCGAA 62.158 55.000 2.65 2.65 38.13 4.70
2352 2872 2.094724 GCGAGCTTTCGTGCGAAG 59.905 61.111 7.10 3.88 38.13 3.79
2373 2893 8.882415 CGAAGCTAGTATAATTGGGTCTAAAA 57.118 34.615 0.00 0.00 0.00 1.52
2374 2894 9.321562 CGAAGCTAGTATAATTGGGTCTAAAAA 57.678 33.333 0.00 0.00 0.00 1.94
2397 2917 6.377327 AAAATTCTTGAGCGTTTCTTGAGA 57.623 33.333 0.00 0.00 0.00 3.27
2398 2918 5.604010 AATTCTTGAGCGTTTCTTGAGAG 57.396 39.130 0.00 0.00 0.00 3.20
2399 2919 3.735237 TCTTGAGCGTTTCTTGAGAGT 57.265 42.857 0.00 0.00 0.00 3.24
2400 2920 4.060038 TCTTGAGCGTTTCTTGAGAGTT 57.940 40.909 0.00 0.00 0.00 3.01
2401 2921 4.442706 TCTTGAGCGTTTCTTGAGAGTTT 58.557 39.130 0.00 0.00 0.00 2.66
2402 2922 4.876107 TCTTGAGCGTTTCTTGAGAGTTTT 59.124 37.500 0.00 0.00 0.00 2.43
2403 2923 5.354234 TCTTGAGCGTTTCTTGAGAGTTTTT 59.646 36.000 0.00 0.00 0.00 1.94
2430 2950 3.724295 GCTACGAAAAGCGAAATCACT 57.276 42.857 0.00 0.00 44.57 3.41
2431 2951 4.835199 GCTACGAAAAGCGAAATCACTA 57.165 40.909 0.00 0.00 44.57 2.74
2432 2952 5.199424 GCTACGAAAAGCGAAATCACTAA 57.801 39.130 0.00 0.00 44.57 2.24
2433 2953 5.796813 GCTACGAAAAGCGAAATCACTAAT 58.203 37.500 0.00 0.00 44.57 1.73
2434 2954 6.248631 GCTACGAAAAGCGAAATCACTAATT 58.751 36.000 0.00 0.00 44.57 1.40
2435 2955 7.396419 GCTACGAAAAGCGAAATCACTAATTA 58.604 34.615 0.00 0.00 44.57 1.40
2436 2956 7.901377 GCTACGAAAAGCGAAATCACTAATTAA 59.099 33.333 0.00 0.00 44.57 1.40
2437 2957 9.749490 CTACGAAAAGCGAAATCACTAATTAAA 57.251 29.630 0.00 0.00 44.57 1.52
2438 2958 8.655378 ACGAAAAGCGAAATCACTAATTAAAG 57.345 30.769 0.00 0.00 44.57 1.85
2439 2959 7.749126 ACGAAAAGCGAAATCACTAATTAAAGG 59.251 33.333 0.00 0.00 44.57 3.11
2440 2960 7.218204 CGAAAAGCGAAATCACTAATTAAAGGG 59.782 37.037 0.00 0.00 44.57 3.95
2441 2961 7.462571 AAAGCGAAATCACTAATTAAAGGGT 57.537 32.000 0.00 0.00 0.00 4.34
2442 2962 6.436843 AGCGAAATCACTAATTAAAGGGTG 57.563 37.500 0.00 0.00 0.00 4.61
2443 2963 5.034797 GCGAAATCACTAATTAAAGGGTGC 58.965 41.667 0.00 0.00 0.00 5.01
2444 2964 5.578776 CGAAATCACTAATTAAAGGGTGCC 58.421 41.667 0.00 0.00 0.00 5.01
2445 2965 5.449999 CGAAATCACTAATTAAAGGGTGCCC 60.450 44.000 0.00 0.00 0.00 5.36
2464 2984 2.779506 CCTTACAAAGGTCACTCCCAC 58.220 52.381 0.00 0.00 43.95 4.61
2465 2985 2.552373 CCTTACAAAGGTCACTCCCACC 60.552 54.545 0.00 0.00 43.95 4.61
2472 2992 3.790089 AGGTCACTCCCACCTTTTTAG 57.210 47.619 0.00 0.00 41.95 1.85
2473 2993 2.375509 AGGTCACTCCCACCTTTTTAGG 59.624 50.000 0.00 0.00 41.95 2.69
2474 2994 2.107726 GGTCACTCCCACCTTTTTAGGT 59.892 50.000 0.00 0.00 44.23 3.08
2475 2995 3.436035 GGTCACTCCCACCTTTTTAGGTT 60.436 47.826 0.00 0.00 40.85 3.50
2476 2996 4.202493 GGTCACTCCCACCTTTTTAGGTTA 60.202 45.833 0.00 0.00 40.85 2.85
2477 2997 4.758674 GTCACTCCCACCTTTTTAGGTTAC 59.241 45.833 0.00 0.00 40.85 2.50
2478 2998 3.749609 CACTCCCACCTTTTTAGGTTACG 59.250 47.826 0.00 0.00 40.85 3.18
2479 2999 3.647590 ACTCCCACCTTTTTAGGTTACGA 59.352 43.478 0.00 0.00 40.85 3.43
2480 3000 3.999001 CTCCCACCTTTTTAGGTTACGAC 59.001 47.826 0.00 0.00 40.85 4.34
2481 3001 3.390639 TCCCACCTTTTTAGGTTACGACA 59.609 43.478 0.00 0.00 40.85 4.35
2482 3002 4.136051 CCCACCTTTTTAGGTTACGACAA 58.864 43.478 0.00 0.00 40.85 3.18
2483 3003 4.214758 CCCACCTTTTTAGGTTACGACAAG 59.785 45.833 0.00 0.00 40.85 3.16
2484 3004 4.818005 CCACCTTTTTAGGTTACGACAAGT 59.182 41.667 0.00 0.00 40.85 3.16
2485 3005 5.277634 CCACCTTTTTAGGTTACGACAAGTG 60.278 44.000 0.00 0.00 40.85 3.16
2486 3006 4.818005 ACCTTTTTAGGTTACGACAAGTGG 59.182 41.667 0.00 0.00 39.57 4.00
2487 3007 4.319984 CCTTTTTAGGTTACGACAAGTGGC 60.320 45.833 0.00 0.00 0.00 5.01
2488 3008 3.472283 TTTAGGTTACGACAAGTGGCA 57.528 42.857 0.00 0.00 0.00 4.92
2489 3009 2.443887 TAGGTTACGACAAGTGGCAC 57.556 50.000 10.29 10.29 0.00 5.01
2490 3010 0.756903 AGGTTACGACAAGTGGCACT 59.243 50.000 15.88 15.88 0.00 4.40
2491 3011 1.140252 AGGTTACGACAAGTGGCACTT 59.860 47.619 26.54 26.54 39.39 3.16
2499 3019 2.811307 AAGTGGCACTTGCATGTGT 58.189 47.368 30.71 5.15 44.36 3.72
2500 3020 0.386476 AAGTGGCACTTGCATGTGTG 59.614 50.000 30.71 18.70 44.36 3.82
2501 3021 0.752743 AGTGGCACTTGCATGTGTGT 60.753 50.000 27.56 11.77 44.36 3.72
2502 3022 0.318107 GTGGCACTTGCATGTGTGTC 60.318 55.000 27.56 19.37 44.36 3.67
2503 3023 0.750911 TGGCACTTGCATGTGTGTCA 60.751 50.000 27.56 21.32 44.98 3.58
2504 3024 0.318107 GGCACTTGCATGTGTGTCAC 60.318 55.000 27.56 14.26 44.36 3.67
2505 3025 0.664761 GCACTTGCATGTGTGTCACT 59.335 50.000 27.56 0.00 41.59 3.41
2506 3026 1.066002 GCACTTGCATGTGTGTCACTT 59.934 47.619 27.56 0.00 41.59 3.16
2507 3027 2.290367 GCACTTGCATGTGTGTCACTTA 59.710 45.455 27.56 0.00 41.59 2.24
2508 3028 3.058016 GCACTTGCATGTGTGTCACTTAT 60.058 43.478 27.56 0.00 41.59 1.73
2509 3029 4.557296 GCACTTGCATGTGTGTCACTTATT 60.557 41.667 27.56 0.00 41.59 1.40
2510 3030 4.913345 CACTTGCATGTGTGTCACTTATTG 59.087 41.667 21.36 0.00 35.11 1.90
2511 3031 3.557577 TGCATGTGTGTCACTTATTGC 57.442 42.857 4.27 8.74 35.11 3.56
2512 3032 2.883386 TGCATGTGTGTCACTTATTGCA 59.117 40.909 14.93 14.93 35.87 4.08
2513 3033 3.317430 TGCATGTGTGTCACTTATTGCAA 59.683 39.130 15.93 0.00 35.59 4.08
2514 3034 3.670055 GCATGTGTGTCACTTATTGCAAC 59.330 43.478 0.00 0.00 35.11 4.17
2515 3035 4.557296 GCATGTGTGTCACTTATTGCAACT 60.557 41.667 0.00 0.00 35.11 3.16
2516 3036 5.522456 CATGTGTGTCACTTATTGCAACTT 58.478 37.500 0.00 0.00 35.11 2.66
2517 3037 6.667370 CATGTGTGTCACTTATTGCAACTTA 58.333 36.000 0.00 0.00 35.11 2.24
2518 3038 6.875948 TGTGTGTCACTTATTGCAACTTAT 57.124 33.333 0.00 0.00 35.11 1.73
2519 3039 6.667370 TGTGTGTCACTTATTGCAACTTATG 58.333 36.000 0.00 0.00 35.11 1.90
2520 3040 6.484977 TGTGTGTCACTTATTGCAACTTATGA 59.515 34.615 0.00 0.83 35.11 2.15
2521 3041 7.017645 GTGTGTCACTTATTGCAACTTATGAG 58.982 38.462 0.00 0.00 0.00 2.90
2522 3042 6.710295 TGTGTCACTTATTGCAACTTATGAGT 59.290 34.615 0.00 0.00 37.87 3.41
2523 3043 7.228507 TGTGTCACTTATTGCAACTTATGAGTT 59.771 33.333 0.00 0.00 46.85 3.01
2524 3044 8.076178 GTGTCACTTATTGCAACTTATGAGTTT 58.924 33.333 0.00 0.00 43.48 2.66
2525 3045 8.629158 TGTCACTTATTGCAACTTATGAGTTTT 58.371 29.630 0.00 0.00 43.48 2.43
2526 3046 9.463443 GTCACTTATTGCAACTTATGAGTTTTT 57.537 29.630 0.00 0.00 43.48 1.94
2527 3047 9.677567 TCACTTATTGCAACTTATGAGTTTTTC 57.322 29.630 0.00 0.00 43.48 2.29
2528 3048 8.915654 CACTTATTGCAACTTATGAGTTTTTCC 58.084 33.333 0.00 0.00 43.48 3.13
2529 3049 8.860088 ACTTATTGCAACTTATGAGTTTTTCCT 58.140 29.630 0.00 0.00 43.48 3.36
2530 3050 9.696917 CTTATTGCAACTTATGAGTTTTTCCTT 57.303 29.630 0.00 0.00 43.48 3.36
2532 3052 8.962884 ATTGCAACTTATGAGTTTTTCCTTTT 57.037 26.923 0.00 0.00 43.48 2.27
2533 3053 8.785329 TTGCAACTTATGAGTTTTTCCTTTTT 57.215 26.923 0.00 0.00 43.48 1.94
2534 3054 8.419076 TGCAACTTATGAGTTTTTCCTTTTTC 57.581 30.769 0.00 0.00 43.48 2.29
2535 3055 7.221838 TGCAACTTATGAGTTTTTCCTTTTTCG 59.778 33.333 0.00 0.00 43.48 3.46
2536 3056 7.222031 GCAACTTATGAGTTTTTCCTTTTTCGT 59.778 33.333 0.00 0.00 43.48 3.85
2537 3057 9.083080 CAACTTATGAGTTTTTCCTTTTTCGTT 57.917 29.630 0.00 0.00 43.48 3.85
2538 3058 8.628882 ACTTATGAGTTTTTCCTTTTTCGTTG 57.371 30.769 0.00 0.00 29.87 4.10
2539 3059 8.463607 ACTTATGAGTTTTTCCTTTTTCGTTGA 58.536 29.630 0.00 0.00 29.87 3.18
2540 3060 9.463443 CTTATGAGTTTTTCCTTTTTCGTTGAT 57.537 29.630 0.00 0.00 0.00 2.57
2541 3061 9.810545 TTATGAGTTTTTCCTTTTTCGTTGATT 57.189 25.926 0.00 0.00 0.00 2.57
2542 3062 7.749539 TGAGTTTTTCCTTTTTCGTTGATTC 57.250 32.000 0.00 0.00 0.00 2.52
2543 3063 7.316640 TGAGTTTTTCCTTTTTCGTTGATTCA 58.683 30.769 0.00 0.00 0.00 2.57
2544 3064 7.978975 TGAGTTTTTCCTTTTTCGTTGATTCAT 59.021 29.630 0.00 0.00 0.00 2.57
2545 3065 8.716646 AGTTTTTCCTTTTTCGTTGATTCATT 57.283 26.923 0.00 0.00 0.00 2.57
2546 3066 9.161629 AGTTTTTCCTTTTTCGTTGATTCATTT 57.838 25.926 0.00 0.00 0.00 2.32
2550 3070 7.810766 TCCTTTTTCGTTGATTCATTTATGC 57.189 32.000 0.00 0.00 0.00 3.14
2551 3071 7.374272 TCCTTTTTCGTTGATTCATTTATGCA 58.626 30.769 0.00 0.00 0.00 3.96
2552 3072 7.869937 TCCTTTTTCGTTGATTCATTTATGCAA 59.130 29.630 0.00 0.00 0.00 4.08
2553 3073 8.494347 CCTTTTTCGTTGATTCATTTATGCAAA 58.506 29.630 0.00 0.00 0.00 3.68
2554 3074 9.861138 CTTTTTCGTTGATTCATTTATGCAAAA 57.139 25.926 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 216 3.494045 TGACTAGCTCGTTGTGATCAG 57.506 47.619 0.00 0.00 0.00 2.90
259 268 8.723777 CGTAATACACGTGTGAATACATAGAT 57.276 34.615 30.83 9.40 45.82 1.98
511 562 1.639298 GATTCACGCAAGGCTTCGCT 61.639 55.000 15.61 4.34 46.39 4.93
673 739 5.237127 TGTTGTAGTCGAACTTCTTCTCGTA 59.763 40.000 0.00 0.00 36.46 3.43
695 761 3.243267 GGAGCATTTGTTAACGTGGTTGT 60.243 43.478 10.23 0.00 0.00 3.32
776 845 4.998033 ACGATCACGCAAGATCTATCTAGA 59.002 41.667 12.06 0.00 41.74 2.43
836 905 3.138304 GTGCAATCCCGCATATTGTCTA 58.862 45.455 0.00 0.00 45.26 2.59
842 911 1.896220 AATCGTGCAATCCCGCATAT 58.104 45.000 0.00 0.00 45.26 1.78
843 912 2.535012 TAATCGTGCAATCCCGCATA 57.465 45.000 0.00 0.00 45.26 3.14
870 939 1.860950 CGCAAGGACCATATTCGACAG 59.139 52.381 0.00 0.00 0.00 3.51
873 942 0.464036 AGCGCAAGGACCATATTCGA 59.536 50.000 11.47 0.00 38.28 3.71
874 943 0.861837 GAGCGCAAGGACCATATTCG 59.138 55.000 11.47 0.00 38.28 3.34
876 945 0.532862 CCGAGCGCAAGGACCATATT 60.533 55.000 11.47 0.00 38.28 1.28
879 948 3.390521 TCCGAGCGCAAGGACCAT 61.391 61.111 18.12 0.00 38.28 3.55
888 957 2.279937 CTTGCGTTAAGTCCGAGCGC 62.280 60.000 0.00 0.00 47.00 5.92
891 960 0.245539 TCCCTTGCGTTAAGTCCGAG 59.754 55.000 0.00 0.00 34.45 4.63
906 975 1.081277 GGGTGGAGTCTCCTTCCCT 59.919 63.158 29.44 0.00 43.11 4.20
921 990 2.590114 GGGTGTAGTCGCCAAGGGT 61.590 63.158 0.40 0.00 45.25 4.34
925 994 1.466025 AAGTCGGGTGTAGTCGCCAA 61.466 55.000 0.40 0.00 45.25 4.52
936 1005 6.946583 TCATATAGCTATGTAGAAAGTCGGGT 59.053 38.462 16.77 0.00 36.80 5.28
937 1006 7.392494 TCATATAGCTATGTAGAAAGTCGGG 57.608 40.000 16.77 0.00 36.80 5.14
966 1036 6.932356 GAGAATCTCCTGCACATATTCAAA 57.068 37.500 0.00 0.00 0.00 2.69
990 1060 7.689299 TCTTCCCTTTGATCATTTCTTCTGTA 58.311 34.615 0.00 0.00 0.00 2.74
1002 1072 3.956199 TCATTGGCATCTTCCCTTTGATC 59.044 43.478 0.00 0.00 0.00 2.92
1024 1094 2.419198 GACGATCGCCTCCTGCAT 59.581 61.111 16.60 0.00 41.33 3.96
1026 1096 3.815569 CTCGACGATCGCCTCCTGC 62.816 68.421 16.60 0.00 40.21 4.85
1032 1102 0.661780 CAGGAATCTCGACGATCGCC 60.662 60.000 16.60 2.22 40.21 5.54
1037 1107 1.379977 AGGCCAGGAATCTCGACGA 60.380 57.895 5.01 0.00 0.00 4.20
1045 1115 1.075748 GATTGCCCAGGCCAGGAAT 60.076 57.895 17.38 11.31 41.09 3.01
1052 1122 1.893062 GTCAAAGGATTGCCCAGGC 59.107 57.895 0.38 0.38 42.35 4.85
1055 1125 0.893270 CCACGTCAAAGGATTGCCCA 60.893 55.000 0.00 0.00 36.45 5.36
1057 1127 1.212751 GCCACGTCAAAGGATTGCC 59.787 57.895 0.00 0.00 36.45 4.52
1061 1131 2.746277 GCGGCCACGTCAAAGGAT 60.746 61.111 2.24 0.00 43.45 3.24
1165 1235 1.219773 ATCACACTCCCATCATGCCT 58.780 50.000 0.00 0.00 0.00 4.75
1167 1237 3.488047 CGAAAATCACACTCCCATCATGC 60.488 47.826 0.00 0.00 0.00 4.06
1185 1255 1.237954 TGCATTTGTAGGCCGCGAAA 61.238 50.000 8.23 0.00 0.00 3.46
1194 1264 9.409312 TCATTACAGTTGAAAATGCATTTGTAG 57.591 29.630 24.74 13.70 31.98 2.74
1199 1269 5.345741 GCGTCATTACAGTTGAAAATGCATT 59.654 36.000 5.99 5.99 31.98 3.56
1218 1288 0.955428 GTTCTGCCTCCAATGCGTCA 60.955 55.000 0.00 0.00 0.00 4.35
1224 1294 2.025981 TGCATGTAGTTCTGCCTCCAAT 60.026 45.455 0.00 0.00 37.59 3.16
1287 1357 2.024871 GACTGAGCGACGATCGGG 59.975 66.667 24.41 14.29 40.84 5.14
1298 1368 0.167033 CACTGACGAGTCGGACTGAG 59.833 60.000 16.72 11.65 39.24 3.35
1311 1381 1.945354 TAGCCGCTAGTGCCACTGAC 61.945 60.000 7.83 0.00 35.36 3.51
1329 1399 3.173965 GGCTAAGCTATCCCCAGTCATA 58.826 50.000 0.00 0.00 0.00 2.15
1353 1423 2.029623 ACTAAGTGTCCATACGCCGAT 58.970 47.619 0.00 0.00 36.76 4.18
1359 1429 3.881688 TCTCCGCTACTAAGTGTCCATAC 59.118 47.826 0.00 0.00 0.00 2.39
1368 1438 3.965292 TGTCGAATCTCCGCTACTAAG 57.035 47.619 0.00 0.00 0.00 2.18
1377 1447 2.158900 ACCCATGTGATGTCGAATCTCC 60.159 50.000 0.00 0.00 0.00 3.71
1386 1456 1.623311 TCTCGAACACCCATGTGATGT 59.377 47.619 0.00 0.00 45.76 3.06
1488 1558 3.841643 ACTTCTACCGAACCATACAACG 58.158 45.455 0.00 0.00 0.00 4.10
1506 1576 0.966920 CCTCAGTACACGGTGGACTT 59.033 55.000 23.17 6.46 38.73 3.01
1515 1585 1.608283 GGCACCAACTCCTCAGTACAC 60.608 57.143 0.00 0.00 30.14 2.90
1536 1606 6.272324 TCATAGGGATAAGGTTACAATCCAGG 59.728 42.308 11.07 0.00 40.87 4.45
1553 1626 9.053472 TGGTAAGAGAGTTTTATTTCATAGGGA 57.947 33.333 0.00 0.00 0.00 4.20
1561 1634 9.643693 CATTGCAATGGTAAGAGAGTTTTATTT 57.356 29.630 28.34 0.00 32.78 1.40
1596 1669 7.161773 AGTAACTTGCATTGCTCATTGTATT 57.838 32.000 10.49 0.00 0.00 1.89
1598 1671 6.206438 TCAAGTAACTTGCATTGCTCATTGTA 59.794 34.615 10.49 0.00 40.84 2.41
1599 1672 5.009911 TCAAGTAACTTGCATTGCTCATTGT 59.990 36.000 10.49 0.00 40.84 2.71
1600 1673 5.463286 TCAAGTAACTTGCATTGCTCATTG 58.537 37.500 10.49 5.77 40.84 2.82
1601 1674 5.242393 ACTCAAGTAACTTGCATTGCTCATT 59.758 36.000 10.49 3.92 40.84 2.57
1602 1675 4.763793 ACTCAAGTAACTTGCATTGCTCAT 59.236 37.500 10.49 0.00 40.84 2.90
1603 1676 4.136796 ACTCAAGTAACTTGCATTGCTCA 58.863 39.130 10.49 0.00 40.84 4.26
1604 1677 4.756084 ACTCAAGTAACTTGCATTGCTC 57.244 40.909 10.49 0.00 40.84 4.26
1605 1678 5.520376 AAACTCAAGTAACTTGCATTGCT 57.480 34.783 10.49 0.00 40.84 3.91
1606 1679 6.588348 AAAAACTCAAGTAACTTGCATTGC 57.412 33.333 0.46 0.46 40.84 3.56
1628 1701 9.729281 CCCACCTCAAGTAACTATTACTAAAAA 57.271 33.333 1.79 0.00 45.33 1.94
1629 1702 7.825761 GCCCACCTCAAGTAACTATTACTAAAA 59.174 37.037 1.79 0.00 45.33 1.52
1630 1703 7.333323 GCCCACCTCAAGTAACTATTACTAAA 58.667 38.462 1.79 0.00 45.33 1.85
1631 1704 6.406177 CGCCCACCTCAAGTAACTATTACTAA 60.406 42.308 1.79 0.00 45.33 2.24
1632 1705 5.068198 CGCCCACCTCAAGTAACTATTACTA 59.932 44.000 1.79 0.00 45.33 1.82
1634 1707 4.117685 CGCCCACCTCAAGTAACTATTAC 58.882 47.826 0.00 0.00 36.38 1.89
1635 1708 3.770933 ACGCCCACCTCAAGTAACTATTA 59.229 43.478 0.00 0.00 0.00 0.98
1636 1709 2.570302 ACGCCCACCTCAAGTAACTATT 59.430 45.455 0.00 0.00 0.00 1.73
1637 1710 2.093658 CACGCCCACCTCAAGTAACTAT 60.094 50.000 0.00 0.00 0.00 2.12
1638 1711 1.274167 CACGCCCACCTCAAGTAACTA 59.726 52.381 0.00 0.00 0.00 2.24
1639 1712 0.034896 CACGCCCACCTCAAGTAACT 59.965 55.000 0.00 0.00 0.00 2.24
1640 1713 0.250166 ACACGCCCACCTCAAGTAAC 60.250 55.000 0.00 0.00 0.00 2.50
1641 1714 0.470766 AACACGCCCACCTCAAGTAA 59.529 50.000 0.00 0.00 0.00 2.24
1642 1715 0.034337 GAACACGCCCACCTCAAGTA 59.966 55.000 0.00 0.00 0.00 2.24
1643 1716 1.227853 GAACACGCCCACCTCAAGT 60.228 57.895 0.00 0.00 0.00 3.16
1644 1717 1.071471 AGAACACGCCCACCTCAAG 59.929 57.895 0.00 0.00 0.00 3.02
1645 1718 1.227823 CAGAACACGCCCACCTCAA 60.228 57.895 0.00 0.00 0.00 3.02
1646 1719 1.691195 TTCAGAACACGCCCACCTCA 61.691 55.000 0.00 0.00 0.00 3.86
1647 1720 1.070786 TTCAGAACACGCCCACCTC 59.929 57.895 0.00 0.00 0.00 3.85
1648 1721 1.227853 GTTCAGAACACGCCCACCT 60.228 57.895 8.54 0.00 0.00 4.00
1649 1722 1.227853 AGTTCAGAACACGCCCACC 60.228 57.895 15.85 0.00 0.00 4.61
1650 1723 1.228657 GGAGTTCAGAACACGCCCAC 61.229 60.000 15.85 0.00 0.00 4.61
1651 1724 1.070786 GGAGTTCAGAACACGCCCA 59.929 57.895 15.85 0.00 0.00 5.36
1652 1725 0.670854 GAGGAGTTCAGAACACGCCC 60.671 60.000 15.85 10.23 0.00 6.13
1653 1726 0.670854 GGAGGAGTTCAGAACACGCC 60.671 60.000 15.85 14.02 0.00 5.68
1669 1742 0.615850 GGAGTTGGGAGAGTTGGGAG 59.384 60.000 0.00 0.00 0.00 4.30
1690 1763 0.748005 GCGCTGGGAAGCTGGATTTA 60.748 55.000 0.00 0.00 0.00 1.40
1701 1774 3.952508 TTGGAAGCTGCGCTGGGA 61.953 61.111 16.47 0.00 39.62 4.37
1704 1777 1.208614 GAAGTTGGAAGCTGCGCTG 59.791 57.895 9.73 10.04 39.62 5.18
1735 1808 4.028490 TGGCTGCCGAACGGGATT 62.028 61.111 14.98 0.00 38.47 3.01
1741 1814 3.188786 CTAGCGTGGCTGCCGAAC 61.189 66.667 14.98 6.64 40.10 3.95
1745 1818 3.198489 GAAGCTAGCGTGGCTGCC 61.198 66.667 12.87 12.87 40.10 4.85
1772 1845 2.292794 GATGCTGCCAGCCCATGTTG 62.293 60.000 15.29 0.00 41.51 3.33
1775 1848 0.251209 ATAGATGCTGCCAGCCCATG 60.251 55.000 15.29 0.00 41.51 3.66
1779 1853 2.266627 GCCATAGATGCTGCCAGCC 61.267 63.158 15.29 0.00 41.51 4.85
1822 1896 3.406764 CTCATTATGGGCTGGTTCTAGC 58.593 50.000 0.00 0.00 42.94 3.42
1825 1899 1.565759 TGCTCATTATGGGCTGGTTCT 59.434 47.619 18.49 0.00 46.08 3.01
1842 1916 1.108727 CCTCATCTCTCGAGCCTGCT 61.109 60.000 7.81 0.00 0.00 4.24
1844 1918 1.462731 CCCCTCATCTCTCGAGCCTG 61.463 65.000 7.81 5.00 0.00 4.85
1845 1919 1.152567 CCCCTCATCTCTCGAGCCT 60.153 63.158 7.81 0.00 0.00 4.58
1846 1920 1.456705 ACCCCTCATCTCTCGAGCC 60.457 63.158 7.81 0.00 0.00 4.70
1847 1921 1.739049 CACCCCTCATCTCTCGAGC 59.261 63.158 7.81 0.00 0.00 5.03
1848 1922 1.739049 GCACCCCTCATCTCTCGAG 59.261 63.158 5.93 5.93 0.00 4.04
1849 1923 1.758514 GGCACCCCTCATCTCTCGA 60.759 63.158 0.00 0.00 0.00 4.04
1850 1924 2.818132 GGCACCCCTCATCTCTCG 59.182 66.667 0.00 0.00 0.00 4.04
1851 1925 1.118356 ATCGGCACCCCTCATCTCTC 61.118 60.000 0.00 0.00 0.00 3.20
1852 1926 0.692419 AATCGGCACCCCTCATCTCT 60.692 55.000 0.00 0.00 0.00 3.10
1853 1927 0.250081 GAATCGGCACCCCTCATCTC 60.250 60.000 0.00 0.00 0.00 2.75
1854 1928 1.832912 GAATCGGCACCCCTCATCT 59.167 57.895 0.00 0.00 0.00 2.90
1855 1929 1.595382 CGAATCGGCACCCCTCATC 60.595 63.158 0.00 0.00 0.00 2.92
1874 2392 3.148279 GGCGGTCCTCCTCACGAT 61.148 66.667 0.00 0.00 0.00 3.73
1900 2420 6.234177 CCCTCACTCAATAGATAAATGACCC 58.766 44.000 0.00 0.00 0.00 4.46
1901 2421 6.234177 CCCCTCACTCAATAGATAAATGACC 58.766 44.000 0.00 0.00 0.00 4.02
1902 2422 6.234177 CCCCCTCACTCAATAGATAAATGAC 58.766 44.000 0.00 0.00 0.00 3.06
1904 2424 5.006386 GCCCCCTCACTCAATAGATAAATG 58.994 45.833 0.00 0.00 0.00 2.32
1905 2425 4.665009 TGCCCCCTCACTCAATAGATAAAT 59.335 41.667 0.00 0.00 0.00 1.40
1909 2429 2.196742 TGCCCCCTCACTCAATAGAT 57.803 50.000 0.00 0.00 0.00 1.98
1915 2435 1.612146 TTCGATGCCCCCTCACTCA 60.612 57.895 0.00 0.00 0.00 3.41
1919 2439 3.781307 CGGTTCGATGCCCCCTCA 61.781 66.667 0.00 0.00 0.00 3.86
1927 2447 4.426416 TCAAGTTACATACCGGTTCGATG 58.574 43.478 15.04 13.90 0.00 3.84
1928 2448 4.724074 TCAAGTTACATACCGGTTCGAT 57.276 40.909 15.04 0.00 0.00 3.59
1983 2503 0.859232 CTCCACCGAACGTGAAGTTG 59.141 55.000 0.00 0.00 46.20 3.16
1985 2505 1.300697 GCTCCACCGAACGTGAAGT 60.301 57.895 0.00 0.00 46.20 3.01
1986 2506 1.006102 AGCTCCACCGAACGTGAAG 60.006 57.895 0.00 0.00 46.20 3.02
1988 2508 2.338620 CAGCTCCACCGAACGTGA 59.661 61.111 0.00 0.00 46.20 4.35
1989 2509 2.738521 CCAGCTCCACCGAACGTG 60.739 66.667 0.00 0.00 42.62 4.49
1990 2510 4.003788 CCCAGCTCCACCGAACGT 62.004 66.667 0.00 0.00 0.00 3.99
2012 2532 2.561373 CAAAAACGAGGAGCCCGC 59.439 61.111 0.00 0.00 0.00 6.13
2032 2552 1.607628 GAGAAGCTAGCCGGATCGTAA 59.392 52.381 12.13 0.00 0.00 3.18
2037 2557 1.686052 CTTCTGAGAAGCTAGCCGGAT 59.314 52.381 12.13 0.00 0.00 4.18
2038 2558 1.107114 CTTCTGAGAAGCTAGCCGGA 58.893 55.000 12.13 3.43 0.00 5.14
2040 2560 2.663826 AACTTCTGAGAAGCTAGCCG 57.336 50.000 21.38 0.00 0.00 5.52
2079 2599 6.483640 ACTCTATAAATGATTTTGAGCCGGAC 59.516 38.462 5.05 0.00 0.00 4.79
2081 2601 6.867662 ACTCTATAAATGATTTTGAGCCGG 57.132 37.500 0.00 0.00 0.00 6.13
2097 2617 5.248477 AGCTTCCAACTTCACCAACTCTATA 59.752 40.000 0.00 0.00 0.00 1.31
2098 2618 4.042187 AGCTTCCAACTTCACCAACTCTAT 59.958 41.667 0.00 0.00 0.00 1.98
2100 2620 2.173569 AGCTTCCAACTTCACCAACTCT 59.826 45.455 0.00 0.00 0.00 3.24
2108 2628 0.401738 CCCTCCAGCTTCCAACTTCA 59.598 55.000 0.00 0.00 0.00 3.02
2109 2629 0.322906 CCCCTCCAGCTTCCAACTTC 60.323 60.000 0.00 0.00 0.00 3.01
2110 2630 1.068352 ACCCCTCCAGCTTCCAACTT 61.068 55.000 0.00 0.00 0.00 2.66
2111 2631 1.068352 AACCCCTCCAGCTTCCAACT 61.068 55.000 0.00 0.00 0.00 3.16
2112 2632 0.609406 GAACCCCTCCAGCTTCCAAC 60.609 60.000 0.00 0.00 0.00 3.77
2113 2633 1.065410 TGAACCCCTCCAGCTTCCAA 61.065 55.000 0.00 0.00 0.00 3.53
2114 2634 1.463214 TGAACCCCTCCAGCTTCCA 60.463 57.895 0.00 0.00 0.00 3.53
2115 2635 1.201429 TCTGAACCCCTCCAGCTTCC 61.201 60.000 0.00 0.00 0.00 3.46
2116 2636 0.693049 TTCTGAACCCCTCCAGCTTC 59.307 55.000 0.00 0.00 0.00 3.86
2117 2637 0.402121 GTTCTGAACCCCTCCAGCTT 59.598 55.000 9.38 0.00 0.00 3.74
2118 2638 0.768221 TGTTCTGAACCCCTCCAGCT 60.768 55.000 17.26 0.00 0.00 4.24
2119 2639 0.322008 CTGTTCTGAACCCCTCCAGC 60.322 60.000 17.26 0.00 0.00 4.85
2120 2640 0.326264 CCTGTTCTGAACCCCTCCAG 59.674 60.000 17.26 7.18 0.00 3.86
2121 2641 0.104672 TCCTGTTCTGAACCCCTCCA 60.105 55.000 17.26 0.00 0.00 3.86
2122 2642 1.064825 TTCCTGTTCTGAACCCCTCC 58.935 55.000 17.26 0.00 0.00 4.30
2123 2643 2.951229 TTTCCTGTTCTGAACCCCTC 57.049 50.000 17.26 0.00 0.00 4.30
2124 2644 3.680777 TTTTTCCTGTTCTGAACCCCT 57.319 42.857 17.26 0.00 0.00 4.79
2125 2645 3.554960 GCATTTTTCCTGTTCTGAACCCC 60.555 47.826 17.26 0.00 0.00 4.95
2126 2646 3.554960 GGCATTTTTCCTGTTCTGAACCC 60.555 47.826 17.26 4.08 0.00 4.11
2127 2647 3.321968 AGGCATTTTTCCTGTTCTGAACC 59.678 43.478 17.26 1.11 31.53 3.62
2128 2648 4.037923 TGAGGCATTTTTCCTGTTCTGAAC 59.962 41.667 13.49 13.49 33.24 3.18
2129 2649 4.037923 GTGAGGCATTTTTCCTGTTCTGAA 59.962 41.667 0.00 0.00 33.24 3.02
2130 2650 3.569701 GTGAGGCATTTTTCCTGTTCTGA 59.430 43.478 0.00 0.00 33.24 3.27
2131 2651 3.318839 TGTGAGGCATTTTTCCTGTTCTG 59.681 43.478 0.00 0.00 33.24 3.02
2132 2652 3.565307 TGTGAGGCATTTTTCCTGTTCT 58.435 40.909 0.00 0.00 33.24 3.01
2133 2653 4.320608 TTGTGAGGCATTTTTCCTGTTC 57.679 40.909 0.00 0.00 33.24 3.18
2134 2654 4.081198 TGTTTGTGAGGCATTTTTCCTGTT 60.081 37.500 0.00 0.00 33.24 3.16
2135 2655 3.450457 TGTTTGTGAGGCATTTTTCCTGT 59.550 39.130 0.00 0.00 33.24 4.00
2136 2656 4.057406 TGTTTGTGAGGCATTTTTCCTG 57.943 40.909 0.00 0.00 33.24 3.86
2137 2657 4.961438 ATGTTTGTGAGGCATTTTTCCT 57.039 36.364 0.00 0.00 36.46 3.36
2138 2658 5.405269 GTGTATGTTTGTGAGGCATTTTTCC 59.595 40.000 0.00 0.00 0.00 3.13
2139 2659 5.982516 TGTGTATGTTTGTGAGGCATTTTTC 59.017 36.000 0.00 0.00 0.00 2.29
2140 2660 5.911752 TGTGTATGTTTGTGAGGCATTTTT 58.088 33.333 0.00 0.00 0.00 1.94
2141 2661 5.301551 TCTGTGTATGTTTGTGAGGCATTTT 59.698 36.000 0.00 0.00 0.00 1.82
2142 2662 4.826733 TCTGTGTATGTTTGTGAGGCATTT 59.173 37.500 0.00 0.00 0.00 2.32
2143 2663 4.216257 GTCTGTGTATGTTTGTGAGGCATT 59.784 41.667 0.00 0.00 0.00 3.56
2144 2664 3.753272 GTCTGTGTATGTTTGTGAGGCAT 59.247 43.478 0.00 0.00 0.00 4.40
2145 2665 3.138304 GTCTGTGTATGTTTGTGAGGCA 58.862 45.455 0.00 0.00 0.00 4.75
2146 2666 2.157668 CGTCTGTGTATGTTTGTGAGGC 59.842 50.000 0.00 0.00 0.00 4.70
2147 2667 3.649073 TCGTCTGTGTATGTTTGTGAGG 58.351 45.455 0.00 0.00 0.00 3.86
2148 2668 4.745125 ACTTCGTCTGTGTATGTTTGTGAG 59.255 41.667 0.00 0.00 0.00 3.51
2149 2669 4.689071 ACTTCGTCTGTGTATGTTTGTGA 58.311 39.130 0.00 0.00 0.00 3.58
2150 2670 5.690409 ACTACTTCGTCTGTGTATGTTTGTG 59.310 40.000 0.00 0.00 0.00 3.33
2151 2671 5.839621 ACTACTTCGTCTGTGTATGTTTGT 58.160 37.500 0.00 0.00 0.00 2.83
2152 2672 6.200286 ACAACTACTTCGTCTGTGTATGTTTG 59.800 38.462 0.00 0.00 0.00 2.93
2153 2673 6.200286 CACAACTACTTCGTCTGTGTATGTTT 59.800 38.462 0.00 0.00 34.13 2.83
2154 2674 5.690409 CACAACTACTTCGTCTGTGTATGTT 59.310 40.000 0.00 0.00 34.13 2.71
2155 2675 5.220381 CACAACTACTTCGTCTGTGTATGT 58.780 41.667 0.00 0.00 34.13 2.29
2156 2676 4.621460 CCACAACTACTTCGTCTGTGTATG 59.379 45.833 0.00 0.00 36.49 2.39
2157 2677 4.806330 CCACAACTACTTCGTCTGTGTAT 58.194 43.478 0.00 0.00 36.49 2.29
2158 2678 3.551454 GCCACAACTACTTCGTCTGTGTA 60.551 47.826 0.00 0.00 36.49 2.90
2159 2679 2.802057 GCCACAACTACTTCGTCTGTGT 60.802 50.000 0.00 0.00 36.49 3.72
2160 2680 1.792949 GCCACAACTACTTCGTCTGTG 59.207 52.381 0.00 0.00 37.68 3.66
2161 2681 1.687123 AGCCACAACTACTTCGTCTGT 59.313 47.619 0.00 0.00 0.00 3.41
2162 2682 2.329379 GAGCCACAACTACTTCGTCTG 58.671 52.381 0.00 0.00 0.00 3.51
2163 2683 1.068472 CGAGCCACAACTACTTCGTCT 60.068 52.381 0.00 0.00 0.00 4.18
2164 2684 1.337821 CGAGCCACAACTACTTCGTC 58.662 55.000 0.00 0.00 0.00 4.20
2165 2685 0.666577 GCGAGCCACAACTACTTCGT 60.667 55.000 0.00 0.00 0.00 3.85
2166 2686 1.352156 GGCGAGCCACAACTACTTCG 61.352 60.000 9.58 0.00 35.81 3.79
2167 2687 0.037232 AGGCGAGCCACAACTACTTC 60.037 55.000 17.18 0.00 38.92 3.01
2168 2688 0.037232 GAGGCGAGCCACAACTACTT 60.037 55.000 17.18 0.00 38.92 2.24
2169 2689 1.592223 GAGGCGAGCCACAACTACT 59.408 57.895 17.18 0.00 38.92 2.57
2170 2690 1.805945 CGAGGCGAGCCACAACTAC 60.806 63.158 17.18 0.00 38.92 2.73
2171 2691 2.571757 CGAGGCGAGCCACAACTA 59.428 61.111 17.18 0.00 38.92 2.24
2172 2692 4.379243 CCGAGGCGAGCCACAACT 62.379 66.667 17.18 0.00 38.92 3.16
2183 2703 0.449388 GCATTGCATATAGCCGAGGC 59.551 55.000 5.89 5.89 44.83 4.70
2184 2704 0.723414 CGCATTGCATATAGCCGAGG 59.277 55.000 9.69 0.00 44.83 4.63
2185 2705 0.095935 GCGCATTGCATATAGCCGAG 59.904 55.000 9.69 0.00 45.45 4.63
2186 2706 1.625759 CGCGCATTGCATATAGCCGA 61.626 55.000 8.75 0.00 46.97 5.54
2187 2707 1.225827 CGCGCATTGCATATAGCCG 60.226 57.895 8.75 0.00 46.97 5.52
2188 2708 1.135315 CCGCGCATTGCATATAGCC 59.865 57.895 8.75 0.00 46.97 3.93
2189 2709 1.135315 CCCGCGCATTGCATATAGC 59.865 57.895 8.75 2.45 46.97 2.97
2190 2710 1.135315 GCCCGCGCATTGCATATAG 59.865 57.895 8.75 0.00 46.97 1.31
2191 2711 2.331893 GGCCCGCGCATTGCATATA 61.332 57.895 8.75 0.00 46.97 0.86
2192 2712 3.673484 GGCCCGCGCATTGCATAT 61.673 61.111 8.75 0.00 46.97 1.78
2205 2725 3.860930 TTGGAAGGAACGCTGGCCC 62.861 63.158 0.00 0.00 0.00 5.80
2206 2726 1.250840 AATTGGAAGGAACGCTGGCC 61.251 55.000 0.00 0.00 0.00 5.36
2207 2727 0.171231 GAATTGGAAGGAACGCTGGC 59.829 55.000 0.00 0.00 0.00 4.85
2208 2728 0.447801 CGAATTGGAAGGAACGCTGG 59.552 55.000 0.00 0.00 0.00 4.85
2209 2729 0.179189 GCGAATTGGAAGGAACGCTG 60.179 55.000 0.00 0.00 42.19 5.18
2210 2730 2.171635 GCGAATTGGAAGGAACGCT 58.828 52.632 0.00 0.00 42.19 5.07
2211 2731 1.327764 CTAGCGAATTGGAAGGAACGC 59.672 52.381 0.00 0.00 45.03 4.84
2212 2732 2.888594 TCTAGCGAATTGGAAGGAACG 58.111 47.619 0.00 0.00 0.00 3.95
2213 2733 3.064134 GCTTCTAGCGAATTGGAAGGAAC 59.936 47.826 9.11 0.00 36.61 3.62
2214 2734 3.270877 GCTTCTAGCGAATTGGAAGGAA 58.729 45.455 9.11 0.00 36.61 3.36
2215 2735 2.236146 TGCTTCTAGCGAATTGGAAGGA 59.764 45.455 9.11 4.89 46.26 3.36
2216 2736 2.632377 TGCTTCTAGCGAATTGGAAGG 58.368 47.619 9.11 0.00 46.26 3.46
2217 2737 4.889832 ATTGCTTCTAGCGAATTGGAAG 57.110 40.909 0.00 0.00 46.26 3.46
2218 2738 6.751514 TTTATTGCTTCTAGCGAATTGGAA 57.248 33.333 0.00 0.00 46.26 3.53
2219 2739 6.942532 ATTTATTGCTTCTAGCGAATTGGA 57.057 33.333 0.00 0.00 46.26 3.53
2220 2740 8.087982 TCTATTTATTGCTTCTAGCGAATTGG 57.912 34.615 0.00 0.00 46.26 3.16
2221 2741 8.226448 CCTCTATTTATTGCTTCTAGCGAATTG 58.774 37.037 0.00 0.00 46.26 2.32
2222 2742 7.095017 GCCTCTATTTATTGCTTCTAGCGAATT 60.095 37.037 0.00 0.00 46.26 2.17
2223 2743 6.370166 GCCTCTATTTATTGCTTCTAGCGAAT 59.630 38.462 0.00 0.00 46.26 3.34
2224 2744 5.696724 GCCTCTATTTATTGCTTCTAGCGAA 59.303 40.000 0.00 0.00 46.26 4.70
2225 2745 5.230942 GCCTCTATTTATTGCTTCTAGCGA 58.769 41.667 0.00 0.00 46.26 4.93
2226 2746 4.090642 CGCCTCTATTTATTGCTTCTAGCG 59.909 45.833 0.00 0.00 46.26 4.26
2227 2747 4.143009 GCGCCTCTATTTATTGCTTCTAGC 60.143 45.833 0.00 0.00 42.82 3.42
2228 2748 4.390297 GGCGCCTCTATTTATTGCTTCTAG 59.610 45.833 22.15 0.00 0.00 2.43
2229 2749 4.315803 GGCGCCTCTATTTATTGCTTCTA 58.684 43.478 22.15 0.00 0.00 2.10
2230 2750 3.142174 GGCGCCTCTATTTATTGCTTCT 58.858 45.455 22.15 0.00 0.00 2.85
2231 2751 2.226674 GGGCGCCTCTATTTATTGCTTC 59.773 50.000 28.56 0.00 0.00 3.86
2232 2752 2.230660 GGGCGCCTCTATTTATTGCTT 58.769 47.619 28.56 0.00 0.00 3.91
2233 2753 1.142870 TGGGCGCCTCTATTTATTGCT 59.857 47.619 28.56 0.00 0.00 3.91
2234 2754 1.604604 TGGGCGCCTCTATTTATTGC 58.395 50.000 28.56 5.04 0.00 3.56
2235 2755 3.191371 GGAATGGGCGCCTCTATTTATTG 59.809 47.826 28.56 0.00 0.00 1.90
2236 2756 3.421844 GGAATGGGCGCCTCTATTTATT 58.578 45.455 28.56 14.57 0.00 1.40
2237 2757 2.290960 GGGAATGGGCGCCTCTATTTAT 60.291 50.000 28.56 6.79 0.00 1.40
2238 2758 1.073284 GGGAATGGGCGCCTCTATTTA 59.927 52.381 28.56 4.57 0.00 1.40
2239 2759 0.178990 GGGAATGGGCGCCTCTATTT 60.179 55.000 28.56 12.68 0.00 1.40
2240 2760 1.352622 TGGGAATGGGCGCCTCTATT 61.353 55.000 28.56 22.85 0.00 1.73
2241 2761 1.136329 ATGGGAATGGGCGCCTCTAT 61.136 55.000 28.56 15.65 0.00 1.98
2242 2762 1.352622 AATGGGAATGGGCGCCTCTA 61.353 55.000 28.56 13.87 0.00 2.43
2243 2763 2.693871 AATGGGAATGGGCGCCTCT 61.694 57.895 28.56 11.31 0.00 3.69
2244 2764 2.123726 AATGGGAATGGGCGCCTC 60.124 61.111 28.56 16.50 0.00 4.70
2245 2765 1.932156 TACAATGGGAATGGGCGCCT 61.932 55.000 28.56 6.33 0.00 5.52
2246 2766 1.454847 TACAATGGGAATGGGCGCC 60.455 57.895 21.18 21.18 0.00 6.53
2247 2767 1.034838 TGTACAATGGGAATGGGCGC 61.035 55.000 0.00 0.00 0.00 6.53
2248 2768 1.337703 CATGTACAATGGGAATGGGCG 59.662 52.381 0.00 0.00 0.00 6.13
2249 2769 2.362077 GTCATGTACAATGGGAATGGGC 59.638 50.000 0.00 0.00 0.00 5.36
2250 2770 2.618241 CGTCATGTACAATGGGAATGGG 59.382 50.000 0.00 0.00 0.00 4.00
2251 2771 2.033299 GCGTCATGTACAATGGGAATGG 59.967 50.000 0.00 0.00 0.00 3.16
2252 2772 2.682352 TGCGTCATGTACAATGGGAATG 59.318 45.455 0.00 0.00 0.00 2.67
2253 2773 2.945008 CTGCGTCATGTACAATGGGAAT 59.055 45.455 0.00 0.00 0.00 3.01
2254 2774 2.355197 CTGCGTCATGTACAATGGGAA 58.645 47.619 0.00 0.00 0.00 3.97
2255 2775 1.406751 CCTGCGTCATGTACAATGGGA 60.407 52.381 0.00 0.00 0.00 4.37
2256 2776 1.016627 CCTGCGTCATGTACAATGGG 58.983 55.000 0.00 0.00 0.00 4.00
2257 2777 2.022764 TCCTGCGTCATGTACAATGG 57.977 50.000 0.00 0.00 0.00 3.16
2258 2778 3.789791 GCATTCCTGCGTCATGTACAATG 60.790 47.826 0.00 0.00 38.92 2.82
2259 2779 2.355756 GCATTCCTGCGTCATGTACAAT 59.644 45.455 0.00 0.00 38.92 2.71
2260 2780 1.737236 GCATTCCTGCGTCATGTACAA 59.263 47.619 0.00 0.00 38.92 2.41
2261 2781 1.368641 GCATTCCTGCGTCATGTACA 58.631 50.000 0.00 0.00 38.92 2.90
2272 2792 3.825014 AGCTTATTATGGCTGCATTCCTG 59.175 43.478 0.50 0.00 37.41 3.86
2273 2793 4.109877 AGCTTATTATGGCTGCATTCCT 57.890 40.909 0.50 0.00 37.41 3.36
2274 2794 5.006386 ACTAGCTTATTATGGCTGCATTCC 58.994 41.667 0.50 0.00 39.31 3.01
2275 2795 7.099764 TCTACTAGCTTATTATGGCTGCATTC 58.900 38.462 0.50 0.00 39.31 2.67
2276 2796 7.009179 TCTACTAGCTTATTATGGCTGCATT 57.991 36.000 0.50 0.00 39.31 3.56
2277 2797 6.611613 TCTACTAGCTTATTATGGCTGCAT 57.388 37.500 0.50 0.00 39.31 3.96
2278 2798 6.267699 TCTTCTACTAGCTTATTATGGCTGCA 59.732 38.462 0.50 0.00 39.31 4.41
2279 2799 6.692486 TCTTCTACTAGCTTATTATGGCTGC 58.308 40.000 0.00 0.00 39.31 5.25
2280 2800 9.547753 TTTTCTTCTACTAGCTTATTATGGCTG 57.452 33.333 0.00 0.00 39.31 4.85
2289 2809 9.893305 GCAAAATGTTTTTCTTCTACTAGCTTA 57.107 29.630 0.00 0.00 0.00 3.09
2290 2810 8.413229 TGCAAAATGTTTTTCTTCTACTAGCTT 58.587 29.630 0.00 0.00 0.00 3.74
2291 2811 7.940850 TGCAAAATGTTTTTCTTCTACTAGCT 58.059 30.769 0.00 0.00 0.00 3.32
2292 2812 8.574196 TTGCAAAATGTTTTTCTTCTACTAGC 57.426 30.769 0.00 0.00 0.00 3.42
2294 2814 8.977505 GCATTGCAAAATGTTTTTCTTCTACTA 58.022 29.630 1.71 0.00 32.87 1.82
2295 2815 7.712205 AGCATTGCAAAATGTTTTTCTTCTACT 59.288 29.630 11.91 0.00 32.87 2.57
2296 2816 7.854534 AGCATTGCAAAATGTTTTTCTTCTAC 58.145 30.769 11.91 0.00 32.87 2.59
2297 2817 8.977505 GTAGCATTGCAAAATGTTTTTCTTCTA 58.022 29.630 11.91 0.00 32.87 2.10
2298 2818 6.930667 AGCATTGCAAAATGTTTTTCTTCT 57.069 29.167 11.91 0.00 32.87 2.85
2299 2819 7.629130 TGTAGCATTGCAAAATGTTTTTCTTC 58.371 30.769 11.91 0.00 32.87 2.87
2300 2820 7.551035 TGTAGCATTGCAAAATGTTTTTCTT 57.449 28.000 11.91 0.00 32.87 2.52
2301 2821 7.733402 ATGTAGCATTGCAAAATGTTTTTCT 57.267 28.000 11.91 0.00 32.87 2.52
2302 2822 8.683774 CAAATGTAGCATTGCAAAATGTTTTTC 58.316 29.630 11.91 0.00 32.87 2.29
2303 2823 8.189460 ACAAATGTAGCATTGCAAAATGTTTTT 58.811 25.926 11.91 0.00 32.87 1.94
2304 2824 7.705214 ACAAATGTAGCATTGCAAAATGTTTT 58.295 26.923 11.91 0.00 32.87 2.43
2305 2825 7.261829 ACAAATGTAGCATTGCAAAATGTTT 57.738 28.000 11.91 1.76 32.87 2.83
2306 2826 6.864360 ACAAATGTAGCATTGCAAAATGTT 57.136 29.167 11.91 0.00 32.87 2.71
2307 2827 6.864360 AACAAATGTAGCATTGCAAAATGT 57.136 29.167 11.91 5.35 32.87 2.71
2308 2828 7.577979 AGAAACAAATGTAGCATTGCAAAATG 58.422 30.769 11.91 0.00 0.00 2.32
2309 2829 7.733402 AGAAACAAATGTAGCATTGCAAAAT 57.267 28.000 11.91 0.00 0.00 1.82
2310 2830 7.408123 CAAGAAACAAATGTAGCATTGCAAAA 58.592 30.769 11.91 0.00 0.00 2.44
2311 2831 6.511444 GCAAGAAACAAATGTAGCATTGCAAA 60.511 34.615 11.91 0.00 40.07 3.68
2312 2832 5.050227 GCAAGAAACAAATGTAGCATTGCAA 60.050 36.000 11.91 0.00 40.07 4.08
2313 2833 4.448395 GCAAGAAACAAATGTAGCATTGCA 59.552 37.500 11.91 0.00 40.07 4.08
2314 2834 4.433283 CGCAAGAAACAAATGTAGCATTGC 60.433 41.667 0.00 0.00 43.02 3.56
2315 2835 5.181235 CGCAAGAAACAAATGTAGCATTG 57.819 39.130 0.00 0.00 43.02 2.82
2337 2857 0.642800 CTAGCTTCGCACGAAAGCTC 59.357 55.000 23.25 8.59 38.51 4.09
2338 2858 0.038159 ACTAGCTTCGCACGAAAGCT 60.038 50.000 23.17 23.17 39.73 3.74
2339 2859 1.625616 TACTAGCTTCGCACGAAAGC 58.374 50.000 6.95 11.79 33.34 3.51
2340 2860 6.347881 CAATTATACTAGCTTCGCACGAAAG 58.652 40.000 6.95 4.39 33.34 2.62
2341 2861 5.233476 CCAATTATACTAGCTTCGCACGAAA 59.767 40.000 6.95 0.00 33.34 3.46
2342 2862 4.743151 CCAATTATACTAGCTTCGCACGAA 59.257 41.667 5.26 5.26 0.00 3.85
2343 2863 4.295870 CCAATTATACTAGCTTCGCACGA 58.704 43.478 0.00 0.00 0.00 4.35
2344 2864 3.428870 CCCAATTATACTAGCTTCGCACG 59.571 47.826 0.00 0.00 0.00 5.34
2345 2865 4.377897 ACCCAATTATACTAGCTTCGCAC 58.622 43.478 0.00 0.00 0.00 5.34
2346 2866 4.344102 AGACCCAATTATACTAGCTTCGCA 59.656 41.667 0.00 0.00 0.00 5.10
2347 2867 4.884247 AGACCCAATTATACTAGCTTCGC 58.116 43.478 0.00 0.00 0.00 4.70
2348 2868 8.882415 TTTTAGACCCAATTATACTAGCTTCG 57.118 34.615 0.00 0.00 0.00 3.79
2373 2893 6.795399 TCTCAAGAAACGCTCAAGAATTTTT 58.205 32.000 0.00 0.00 0.00 1.94
2374 2894 6.038714 ACTCTCAAGAAACGCTCAAGAATTTT 59.961 34.615 0.00 0.00 0.00 1.82
2375 2895 5.529060 ACTCTCAAGAAACGCTCAAGAATTT 59.471 36.000 0.00 0.00 0.00 1.82
2376 2896 5.059833 ACTCTCAAGAAACGCTCAAGAATT 58.940 37.500 0.00 0.00 0.00 2.17
2377 2897 4.636249 ACTCTCAAGAAACGCTCAAGAAT 58.364 39.130 0.00 0.00 0.00 2.40
2378 2898 4.060038 ACTCTCAAGAAACGCTCAAGAA 57.940 40.909 0.00 0.00 0.00 2.52
2379 2899 3.735237 ACTCTCAAGAAACGCTCAAGA 57.265 42.857 0.00 0.00 0.00 3.02
2380 2900 4.802876 AAACTCTCAAGAAACGCTCAAG 57.197 40.909 0.00 0.00 0.00 3.02
2381 2901 5.560966 AAAAACTCTCAAGAAACGCTCAA 57.439 34.783 0.00 0.00 0.00 3.02
2400 2920 3.040099 GCTTTTCGTAGCTTCGCAAAAA 58.960 40.909 11.13 10.75 38.15 1.94
2401 2921 2.646250 GCTTTTCGTAGCTTCGCAAAA 58.354 42.857 11.13 14.04 38.15 2.44
2402 2922 1.397945 CGCTTTTCGTAGCTTCGCAAA 60.398 47.619 8.00 9.01 39.03 3.68
2403 2923 0.162933 CGCTTTTCGTAGCTTCGCAA 59.837 50.000 8.00 0.11 39.03 4.85
2404 2924 0.665068 TCGCTTTTCGTAGCTTCGCA 60.665 50.000 8.00 0.00 39.03 5.10
2405 2925 0.437295 TTCGCTTTTCGTAGCTTCGC 59.563 50.000 8.00 0.00 39.03 4.70
2406 2926 2.848562 TTTCGCTTTTCGTAGCTTCG 57.151 45.000 6.38 6.38 39.03 3.79
2407 2927 4.082447 GTGATTTCGCTTTTCGTAGCTTC 58.918 43.478 0.00 0.00 39.03 3.86
2408 2928 3.746492 AGTGATTTCGCTTTTCGTAGCTT 59.254 39.130 0.00 0.00 39.03 3.74
2409 2929 3.326747 AGTGATTTCGCTTTTCGTAGCT 58.673 40.909 0.00 0.00 39.03 3.32
2410 2930 3.724295 AGTGATTTCGCTTTTCGTAGC 57.276 42.857 0.00 0.00 39.67 3.58
2411 2931 9.749490 TTTAATTAGTGATTTCGCTTTTCGTAG 57.251 29.630 0.00 0.00 37.87 3.51
2412 2932 9.749490 CTTTAATTAGTGATTTCGCTTTTCGTA 57.251 29.630 0.00 0.00 37.87 3.43
2413 2933 7.749126 CCTTTAATTAGTGATTTCGCTTTTCGT 59.251 33.333 0.00 0.00 37.87 3.85
2414 2934 7.218204 CCCTTTAATTAGTGATTTCGCTTTTCG 59.782 37.037 0.00 0.00 37.87 3.46
2415 2935 8.027189 ACCCTTTAATTAGTGATTTCGCTTTTC 58.973 33.333 0.00 0.00 37.87 2.29
2416 2936 7.812669 CACCCTTTAATTAGTGATTTCGCTTTT 59.187 33.333 0.00 0.00 37.87 2.27
2417 2937 7.312899 CACCCTTTAATTAGTGATTTCGCTTT 58.687 34.615 0.00 0.00 37.87 3.51
2418 2938 6.625081 GCACCCTTTAATTAGTGATTTCGCTT 60.625 38.462 6.74 0.00 37.87 4.68
2419 2939 5.163652 GCACCCTTTAATTAGTGATTTCGCT 60.164 40.000 6.74 0.00 40.27 4.93
2420 2940 5.034797 GCACCCTTTAATTAGTGATTTCGC 58.965 41.667 6.74 0.00 31.79 4.70
2421 2941 5.578776 GGCACCCTTTAATTAGTGATTTCG 58.421 41.667 6.74 0.00 31.79 3.46
2445 2965 2.372172 AGGTGGGAGTGACCTTTGTAAG 59.628 50.000 0.00 0.00 41.31 2.34
2446 2966 2.414612 AGGTGGGAGTGACCTTTGTAA 58.585 47.619 0.00 0.00 41.31 2.41
2447 2967 2.112279 AGGTGGGAGTGACCTTTGTA 57.888 50.000 0.00 0.00 41.31 2.41
2448 2968 2.945718 AGGTGGGAGTGACCTTTGT 58.054 52.632 0.00 0.00 41.31 2.83
2452 2972 2.375509 CCTAAAAAGGTGGGAGTGACCT 59.624 50.000 0.00 0.00 46.36 3.85
2453 2973 2.107726 ACCTAAAAAGGTGGGAGTGACC 59.892 50.000 0.00 0.00 41.33 4.02
2454 2974 3.503800 ACCTAAAAAGGTGGGAGTGAC 57.496 47.619 0.00 0.00 41.33 3.67
2455 2975 4.503643 CGTAACCTAAAAAGGTGGGAGTGA 60.504 45.833 0.00 0.00 42.20 3.41
2456 2976 3.749609 CGTAACCTAAAAAGGTGGGAGTG 59.250 47.826 0.00 0.00 42.20 3.51
2457 2977 3.647590 TCGTAACCTAAAAAGGTGGGAGT 59.352 43.478 0.00 0.00 42.20 3.85
2458 2978 3.999001 GTCGTAACCTAAAAAGGTGGGAG 59.001 47.826 0.00 0.00 42.20 4.30
2459 2979 3.390639 TGTCGTAACCTAAAAAGGTGGGA 59.609 43.478 0.00 0.00 42.20 4.37
2460 2980 3.742385 TGTCGTAACCTAAAAAGGTGGG 58.258 45.455 0.00 0.00 42.20 4.61
2461 2981 4.818005 ACTTGTCGTAACCTAAAAAGGTGG 59.182 41.667 0.00 0.00 42.20 4.61
2462 2982 5.277634 CCACTTGTCGTAACCTAAAAAGGTG 60.278 44.000 0.00 0.00 42.20 4.00
2463 2983 4.818005 CCACTTGTCGTAACCTAAAAAGGT 59.182 41.667 0.00 0.00 45.55 3.50
2464 2984 4.319984 GCCACTTGTCGTAACCTAAAAAGG 60.320 45.833 0.00 0.00 0.00 3.11
2465 2985 4.273969 TGCCACTTGTCGTAACCTAAAAAG 59.726 41.667 0.00 0.00 0.00 2.27
2466 2986 4.035441 GTGCCACTTGTCGTAACCTAAAAA 59.965 41.667 0.00 0.00 0.00 1.94
2467 2987 3.560896 GTGCCACTTGTCGTAACCTAAAA 59.439 43.478 0.00 0.00 0.00 1.52
2468 2988 3.132925 GTGCCACTTGTCGTAACCTAAA 58.867 45.455 0.00 0.00 0.00 1.85
2469 2989 2.366266 AGTGCCACTTGTCGTAACCTAA 59.634 45.455 0.00 0.00 0.00 2.69
2470 2990 1.965643 AGTGCCACTTGTCGTAACCTA 59.034 47.619 0.00 0.00 0.00 3.08
2471 2991 0.756903 AGTGCCACTTGTCGTAACCT 59.243 50.000 0.00 0.00 0.00 3.50
2472 2992 1.589803 AAGTGCCACTTGTCGTAACC 58.410 50.000 9.77 0.00 37.00 2.85
2481 3001 0.386476 CACACATGCAAGTGCCACTT 59.614 50.000 21.29 3.74 43.23 3.16
2482 3002 0.752743 ACACACATGCAAGTGCCACT 60.753 50.000 21.29 0.00 43.23 4.00
2483 3003 0.318107 GACACACATGCAAGTGCCAC 60.318 55.000 21.29 9.18 43.23 5.01
2484 3004 0.750911 TGACACACATGCAAGTGCCA 60.751 50.000 21.29 13.76 43.23 4.92
2485 3005 0.318107 GTGACACACATGCAAGTGCC 60.318 55.000 21.29 11.49 43.23 5.01
2486 3006 0.664761 AGTGACACACATGCAAGTGC 59.335 50.000 21.29 6.60 43.23 4.40
2487 3007 4.754372 ATAAGTGACACACATGCAAGTG 57.246 40.909 19.90 19.90 44.93 3.16
2488 3008 4.557296 GCAATAAGTGACACACATGCAAGT 60.557 41.667 8.59 0.00 36.74 3.16
2489 3009 3.916172 GCAATAAGTGACACACATGCAAG 59.084 43.478 8.59 0.00 36.74 4.01
2490 3010 3.317430 TGCAATAAGTGACACACATGCAA 59.683 39.130 19.36 8.65 38.20 4.08
2491 3011 2.883386 TGCAATAAGTGACACACATGCA 59.117 40.909 18.36 18.36 38.51 3.96
2492 3012 3.557577 TGCAATAAGTGACACACATGC 57.442 42.857 8.59 12.48 36.74 4.06
2493 3013 5.112220 AGTTGCAATAAGTGACACACATG 57.888 39.130 8.59 2.64 36.74 3.21
2494 3014 5.772825 AAGTTGCAATAAGTGACACACAT 57.227 34.783 8.59 0.00 36.74 3.21
2495 3015 6.484977 TCATAAGTTGCAATAAGTGACACACA 59.515 34.615 8.59 0.00 36.74 3.72
2496 3016 6.898041 TCATAAGTTGCAATAAGTGACACAC 58.102 36.000 8.59 0.00 34.10 3.82
2497 3017 6.710295 ACTCATAAGTTGCAATAAGTGACACA 59.290 34.615 8.59 0.00 28.74 3.72
2498 3018 7.133891 ACTCATAAGTTGCAATAAGTGACAC 57.866 36.000 0.59 0.00 28.74 3.67
2499 3019 7.744087 AACTCATAAGTTGCAATAAGTGACA 57.256 32.000 0.59 0.00 44.13 3.58
2500 3020 9.463443 AAAAACTCATAAGTTGCAATAAGTGAC 57.537 29.630 0.59 0.00 45.07 3.67
2501 3021 9.677567 GAAAAACTCATAAGTTGCAATAAGTGA 57.322 29.630 0.59 4.99 45.07 3.41
2502 3022 8.915654 GGAAAAACTCATAAGTTGCAATAAGTG 58.084 33.333 0.59 0.33 45.07 3.16
2503 3023 8.860088 AGGAAAAACTCATAAGTTGCAATAAGT 58.140 29.630 0.59 0.00 45.07 2.24
2504 3024 9.696917 AAGGAAAAACTCATAAGTTGCAATAAG 57.303 29.630 0.59 0.00 45.07 1.73
2507 3027 8.962884 AAAAGGAAAAACTCATAAGTTGCAAT 57.037 26.923 0.59 0.00 45.07 3.56
2508 3028 8.785329 AAAAAGGAAAAACTCATAAGTTGCAA 57.215 26.923 0.00 0.00 45.07 4.08
2509 3029 7.221838 CGAAAAAGGAAAAACTCATAAGTTGCA 59.778 33.333 0.00 0.00 45.07 4.08
2510 3030 7.222031 ACGAAAAAGGAAAAACTCATAAGTTGC 59.778 33.333 0.00 0.00 45.07 4.17
2511 3031 8.628882 ACGAAAAAGGAAAAACTCATAAGTTG 57.371 30.769 0.00 0.00 45.07 3.16
2513 3033 8.463607 TCAACGAAAAAGGAAAAACTCATAAGT 58.536 29.630 0.00 0.00 37.32 2.24
2514 3034 8.850454 TCAACGAAAAAGGAAAAACTCATAAG 57.150 30.769 0.00 0.00 0.00 1.73
2515 3035 9.810545 AATCAACGAAAAAGGAAAAACTCATAA 57.189 25.926 0.00 0.00 0.00 1.90
2516 3036 9.458374 GAATCAACGAAAAAGGAAAAACTCATA 57.542 29.630 0.00 0.00 0.00 2.15
2517 3037 7.978975 TGAATCAACGAAAAAGGAAAAACTCAT 59.021 29.630 0.00 0.00 0.00 2.90
2518 3038 7.316640 TGAATCAACGAAAAAGGAAAAACTCA 58.683 30.769 0.00 0.00 0.00 3.41
2519 3039 7.749539 TGAATCAACGAAAAAGGAAAAACTC 57.250 32.000 0.00 0.00 0.00 3.01
2520 3040 8.716646 AATGAATCAACGAAAAAGGAAAAACT 57.283 26.923 0.00 0.00 0.00 2.66
2524 3044 8.707839 GCATAAATGAATCAACGAAAAAGGAAA 58.292 29.630 0.00 0.00 0.00 3.13
2525 3045 7.869937 TGCATAAATGAATCAACGAAAAAGGAA 59.130 29.630 0.00 0.00 0.00 3.36
2526 3046 7.374272 TGCATAAATGAATCAACGAAAAAGGA 58.626 30.769 0.00 0.00 0.00 3.36
2527 3047 7.579589 TGCATAAATGAATCAACGAAAAAGG 57.420 32.000 0.00 0.00 0.00 3.11
2528 3048 9.861138 TTTTGCATAAATGAATCAACGAAAAAG 57.139 25.926 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.