Multiple sequence alignment - TraesCS7A01G244800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G244800 chr7A 100.000 3413 0 0 1 3413 222506441 222503029 0.000000e+00 6303.0
1 TraesCS7A01G244800 chr7A 90.909 99 8 1 126 224 626606857 626606760 7.690000e-27 132.0
2 TraesCS7A01G244800 chr7B 90.978 2627 170 38 4 2593 191726592 191729188 0.000000e+00 3476.0
3 TraesCS7A01G244800 chr7B 88.205 585 57 7 1006 1585 698631880 698631303 0.000000e+00 688.0
4 TraesCS7A01G244800 chr7B 92.929 99 6 1 126 224 588256294 588256197 3.550000e-30 143.0
5 TraesCS7A01G244800 chr7B 91.919 99 7 1 126 224 588243740 588243643 1.650000e-28 137.0
6 TraesCS7A01G244800 chr7B 78.469 209 34 10 2914 3116 740955033 740954830 3.580000e-25 126.0
7 TraesCS7A01G244800 chr7D 88.563 2658 191 71 283 2864 209826027 209823407 0.000000e+00 3120.0
8 TraesCS7A01G244800 chr7D 81.323 257 38 9 2932 3183 37590001 37589750 2.080000e-47 200.0
9 TraesCS7A01G244800 chr7D 88.889 162 13 4 1022 1183 613500705 613500549 9.660000e-46 195.0
10 TraesCS7A01G244800 chr7D 93.000 100 6 1 126 225 244451560 244451462 9.870000e-31 145.0
11 TraesCS7A01G244800 chr6B 89.231 585 50 8 1006 1585 68219376 68219952 0.000000e+00 719.0
12 TraesCS7A01G244800 chr6B 77.990 209 34 11 2914 3116 558515868 558515666 1.660000e-23 121.0
13 TraesCS7A01G244800 chr5A 87.692 585 60 7 1006 1585 564682000 564681423 0.000000e+00 671.0
14 TraesCS7A01G244800 chr4A 87.521 585 61 7 1006 1585 661809014 661808437 0.000000e+00 665.0
15 TraesCS7A01G244800 chr4A 95.192 104 4 1 1275 1377 79416098 79416201 2.730000e-36 163.0
16 TraesCS7A01G244800 chr4A 80.000 185 23 14 2947 3121 688982830 688983010 1.290000e-24 124.0
17 TraesCS7A01G244800 chr2B 95.364 151 6 1 1277 1426 321106553 321106703 4.400000e-59 239.0
18 TraesCS7A01G244800 chr2B 87.079 178 20 3 1006 1183 321106296 321106470 7.470000e-47 198.0
19 TraesCS7A01G244800 chr2B 82.474 97 15 1 3193 3289 135695864 135695770 2.180000e-12 84.2
20 TraesCS7A01G244800 chr3A 84.649 228 28 4 1006 1233 346428086 346427866 1.590000e-53 220.0
21 TraesCS7A01G244800 chr1B 94.891 137 6 1 1275 1410 606228522 606228658 2.670000e-51 213.0
22 TraesCS7A01G244800 chr5D 94.845 97 4 1 128 224 480858432 480858527 2.120000e-32 150.0
23 TraesCS7A01G244800 chr5D 95.506 89 3 1 136 224 447761995 447761908 1.280000e-29 141.0
24 TraesCS7A01G244800 chr2A 94.737 95 4 1 130 224 763022509 763022416 2.740000e-31 147.0
25 TraesCS7A01G244800 chr2A 92.708 96 6 1 130 225 267885449 267885355 1.650000e-28 137.0
26 TraesCS7A01G244800 chr1D 77.432 257 46 11 2931 3181 486315013 486315263 3.550000e-30 143.0
27 TraesCS7A01G244800 chrUn 79.717 212 29 13 2914 3116 76620245 76620451 1.280000e-29 141.0
28 TraesCS7A01G244800 chr1A 79.048 210 32 11 2914 3116 187151601 187151397 2.140000e-27 134.0
29 TraesCS7A01G244800 chr1A 79.167 192 28 10 2914 3098 521994787 521994973 4.630000e-24 122.0
30 TraesCS7A01G244800 chr1A 83.871 93 13 2 3287 3378 387032369 387032278 1.690000e-13 87.9
31 TraesCS7A01G244800 chr3B 77.990 209 34 11 2914 3116 600142463 600142665 1.660000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G244800 chr7A 222503029 222506441 3412 True 6303 6303 100.000 1 3413 1 chr7A.!!$R1 3412
1 TraesCS7A01G244800 chr7B 191726592 191729188 2596 False 3476 3476 90.978 4 2593 1 chr7B.!!$F1 2589
2 TraesCS7A01G244800 chr7B 698631303 698631880 577 True 688 688 88.205 1006 1585 1 chr7B.!!$R3 579
3 TraesCS7A01G244800 chr7D 209823407 209826027 2620 True 3120 3120 88.563 283 2864 1 chr7D.!!$R2 2581
4 TraesCS7A01G244800 chr6B 68219376 68219952 576 False 719 719 89.231 1006 1585 1 chr6B.!!$F1 579
5 TraesCS7A01G244800 chr5A 564681423 564682000 577 True 671 671 87.692 1006 1585 1 chr5A.!!$R1 579
6 TraesCS7A01G244800 chr4A 661808437 661809014 577 True 665 665 87.521 1006 1585 1 chr4A.!!$R1 579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
854 898 0.393808 GCTAAACCGAGGCCCATGAA 60.394 55.0 0.00 0.0 0.00 2.57 F
1096 1143 0.106569 CCTCCATGGCTGGTATGCAA 60.107 55.0 6.96 0.0 43.61 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1918 1971 0.531200 AGTTCGGGATTGAGTCGGAC 59.469 55.0 0.00 0.0 33.00 4.79 R
2656 2746 1.327303 AAAAAGCATGTGCCTTCGGA 58.673 45.0 0.57 0.0 43.38 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
171 180 4.265073 CTCTTACCCCCTCTTTTCACATG 58.735 47.826 0.00 0.00 0.00 3.21
173 182 1.455822 ACCCCCTCTTTTCACATGGA 58.544 50.000 0.00 0.00 0.00 3.41
176 185 2.041620 CCCCCTCTTTTCACATGGAAGA 59.958 50.000 0.00 0.62 36.72 2.87
199 208 8.830915 AGATCAGAAGGTAAGAGTTAATCTGA 57.169 34.615 5.19 5.19 43.97 3.27
225 234 9.747898 ACCACTACTTAAATCAAATCAATGGTA 57.252 29.630 0.00 0.00 32.58 3.25
250 259 5.654209 AGAGAGACCATGCTAAAATTTTCCC 59.346 40.000 6.72 0.38 0.00 3.97
256 265 8.040727 AGACCATGCTAAAATTTTCCCAATTAC 58.959 33.333 6.72 0.00 0.00 1.89
257 266 7.684529 ACCATGCTAAAATTTTCCCAATTACA 58.315 30.769 6.72 0.00 0.00 2.41
271 280 7.353414 TCCCAATTACAAAGTTTTCACATGA 57.647 32.000 0.00 0.00 0.00 3.07
388 399 4.559906 GCCCCTAACGCTTGTAAAATGTTT 60.560 41.667 0.00 0.00 0.00 2.83
481 496 7.412853 AAATGTTTGTACACTTAAACTGGGT 57.587 32.000 9.04 0.00 37.03 4.51
485 500 6.762661 TGTTTGTACACTTAAACTGGGTAGAC 59.237 38.462 9.04 0.00 37.60 2.59
487 502 6.092955 TGTACACTTAAACTGGGTAGACTG 57.907 41.667 0.00 0.00 0.00 3.51
492 507 5.469084 CACTTAAACTGGGTAGACTGGAAAC 59.531 44.000 0.00 0.00 0.00 2.78
515 531 8.661352 AACGTCATGAATTTGAAAGGAAAAAT 57.339 26.923 0.00 0.00 0.00 1.82
558 577 6.989759 ACCCGAAAACATAAAGCAGAAAAATT 59.010 30.769 0.00 0.00 0.00 1.82
774 798 0.508641 GCAGTGAGCGCATATAACGG 59.491 55.000 11.47 1.92 0.00 4.44
775 799 1.868109 GCAGTGAGCGCATATAACGGA 60.868 52.381 11.47 0.00 0.00 4.69
777 801 1.137513 GTGAGCGCATATAACGGACC 58.862 55.000 11.47 0.00 0.00 4.46
779 803 2.030540 GTGAGCGCATATAACGGACCTA 60.031 50.000 11.47 0.00 0.00 3.08
799 843 1.055849 TGCCAAAGGTACTCTCTGCA 58.944 50.000 0.00 0.00 38.49 4.41
842 886 1.037579 GCTGGGTCATGGGCTAAACC 61.038 60.000 0.00 0.00 37.93 3.27
854 898 0.393808 GCTAAACCGAGGCCCATGAA 60.394 55.000 0.00 0.00 0.00 2.57
959 1003 0.531200 GAACAGAATCGACCCGGAGT 59.469 55.000 0.73 0.00 0.00 3.85
989 1033 4.074526 GCAGCAGGTCAGCGAGGA 62.075 66.667 0.00 0.00 40.15 3.71
990 1034 2.183811 CAGCAGGTCAGCGAGGAG 59.816 66.667 0.00 0.00 40.15 3.69
991 1035 2.036414 AGCAGGTCAGCGAGGAGA 59.964 61.111 0.00 0.00 40.15 3.71
993 1037 3.074999 GCAGGTCAGCGAGGAGAGG 62.075 68.421 0.00 0.00 0.00 3.69
994 1038 1.379176 CAGGTCAGCGAGGAGAGGA 60.379 63.158 0.00 0.00 0.00 3.71
995 1039 1.077068 AGGTCAGCGAGGAGAGGAG 60.077 63.158 0.00 0.00 0.00 3.69
1096 1143 0.106569 CCTCCATGGCTGGTATGCAA 60.107 55.000 6.96 0.00 43.61 4.08
1105 1152 4.986467 GGTATGCAACCTCCCCAG 57.014 61.111 9.89 0.00 45.75 4.45
1107 1154 1.819632 GTATGCAACCTCCCCAGCG 60.820 63.158 0.00 0.00 0.00 5.18
1108 1155 1.992834 TATGCAACCTCCCCAGCGA 60.993 57.895 0.00 0.00 0.00 4.93
1109 1156 1.344953 TATGCAACCTCCCCAGCGAT 61.345 55.000 0.00 0.00 0.00 4.58
1110 1157 2.825836 GCAACCTCCCCAGCGATG 60.826 66.667 0.00 0.00 0.00 3.84
1112 1159 1.450312 CAACCTCCCCAGCGATGTC 60.450 63.158 0.00 0.00 0.00 3.06
1113 1160 1.918293 AACCTCCCCAGCGATGTCA 60.918 57.895 0.00 0.00 0.00 3.58
1114 1161 2.185310 AACCTCCCCAGCGATGTCAC 62.185 60.000 0.00 0.00 0.00 3.67
1116 1163 1.599047 CTCCCCAGCGATGTCACTT 59.401 57.895 0.00 0.00 0.00 3.16
1117 1164 0.460987 CTCCCCAGCGATGTCACTTC 60.461 60.000 0.00 0.00 0.00 3.01
1118 1165 0.904865 TCCCCAGCGATGTCACTTCT 60.905 55.000 0.00 0.00 0.00 2.85
1124 1171 0.368227 GCGATGTCACTTCTTGCTCG 59.632 55.000 0.00 0.00 0.00 5.03
1128 1175 1.664965 GTCACTTCTTGCTCGCCGT 60.665 57.895 0.00 0.00 0.00 5.68
1135 1182 3.011760 CTTGCTCGCCGTTCCGTTC 62.012 63.158 0.00 0.00 0.00 3.95
1155 1202 1.448540 CCGCCGCAAGATCTGACTT 60.449 57.895 0.00 0.00 43.02 3.01
1157 1204 1.699656 CGCCGCAAGATCTGACTTGG 61.700 60.000 16.30 0.00 44.87 3.61
1160 1207 1.734465 CCGCAAGATCTGACTTGGTTC 59.266 52.381 16.30 5.01 44.87 3.62
1161 1208 2.416747 CGCAAGATCTGACTTGGTTCA 58.583 47.619 16.30 0.00 44.87 3.18
1162 1209 2.158449 CGCAAGATCTGACTTGGTTCAC 59.842 50.000 16.30 4.53 44.87 3.18
1197 1244 2.702898 TGTTCATGCCACGAACATTG 57.297 45.000 1.62 0.00 45.85 2.82
1198 1245 2.225467 TGTTCATGCCACGAACATTGA 58.775 42.857 1.62 0.00 45.85 2.57
1199 1246 2.819019 TGTTCATGCCACGAACATTGAT 59.181 40.909 1.62 0.00 45.85 2.57
1200 1247 3.255395 TGTTCATGCCACGAACATTGATT 59.745 39.130 1.62 0.00 45.85 2.57
1225 1272 9.715121 TTAATTAGTAGTGAGATTTCGGTTTGT 57.285 29.630 0.00 0.00 0.00 2.83
1230 1277 2.616842 GTGAGATTTCGGTTTGTGGTGT 59.383 45.455 0.00 0.00 0.00 4.16
1231 1278 2.616376 TGAGATTTCGGTTTGTGGTGTG 59.384 45.455 0.00 0.00 0.00 3.82
1265 1314 3.552273 GCTGTTCTCTCACGTCTTGGTTA 60.552 47.826 0.00 0.00 0.00 2.85
1479 1532 5.012328 ACTAGCTTTTATTCTCCGGTCTG 57.988 43.478 0.00 0.00 0.00 3.51
1490 1543 0.107703 TCCGGTCTGGTTGATGCATC 60.108 55.000 20.14 20.14 39.52 3.91
1493 1546 1.405933 CGGTCTGGTTGATGCATCAGA 60.406 52.381 27.25 18.86 38.19 3.27
1494 1547 2.744166 CGGTCTGGTTGATGCATCAGAT 60.744 50.000 27.25 0.00 38.34 2.90
1502 1555 3.113260 TGATGCATCAGATGAGAGCTG 57.887 47.619 25.42 0.00 32.43 4.24
1503 1556 2.224305 TGATGCATCAGATGAGAGCTGG 60.224 50.000 25.42 0.00 34.20 4.85
1510 1563 2.627221 TCAGATGAGAGCTGGCATACTC 59.373 50.000 9.09 9.09 34.20 2.59
1535 1588 4.770795 AGAGCTGTACCATAACATTCCAC 58.229 43.478 0.00 0.00 0.00 4.02
1542 1595 5.536538 TGTACCATAACATTCCACTTGCAAA 59.463 36.000 0.00 0.00 0.00 3.68
1592 1645 7.538678 CCAATTCATGTTGTTTGTTAGCTCTAC 59.461 37.037 0.00 0.00 0.00 2.59
1600 1653 6.223138 TGTTTGTTAGCTCTACGACAATTG 57.777 37.500 3.24 3.24 32.64 2.32
1809 1862 2.374184 TCTTGTTGTCAGGGTTGGTTG 58.626 47.619 0.00 0.00 0.00 3.77
1833 1886 7.224297 TGAATTAGGGCTAGTTTGGATATCAC 58.776 38.462 4.83 0.00 0.00 3.06
1883 1936 7.665559 TGGAAACTACTTTGATCTTAATGTGCT 59.334 33.333 0.00 0.00 0.00 4.40
1895 1948 2.421923 AATGTGCTGCCTGCCTCAGT 62.422 55.000 0.00 0.00 42.00 3.41
1918 1971 2.017049 GCATACCTGGCTACACTTTGG 58.983 52.381 0.00 0.00 0.00 3.28
1996 2052 5.838531 ACTAACCTCCTTGAGTATTCTCG 57.161 43.478 0.00 0.00 43.09 4.04
1997 2053 4.645588 ACTAACCTCCTTGAGTATTCTCGG 59.354 45.833 0.00 0.00 43.09 4.63
1998 2054 2.389715 ACCTCCTTGAGTATTCTCGGG 58.610 52.381 5.28 5.28 43.09 5.14
2030 2094 6.455360 CATGATACCATGTTTTAGTTGCCT 57.545 37.500 0.00 0.00 43.90 4.75
2117 2181 5.488919 TGAATATGGTCCCTTCTGAGTCTTT 59.511 40.000 0.00 0.00 0.00 2.52
2334 2398 0.397816 ACGCCAAGGAGGAGCTCTAT 60.398 55.000 14.64 2.26 41.55 1.98
2434 2499 8.347035 AGTAGACTCTTTCTTTATCTACATCGC 58.653 37.037 11.21 0.00 42.72 4.58
2585 2652 1.006086 TGCTCGTTATGGCGTCAATG 58.994 50.000 0.00 0.00 0.00 2.82
2597 2686 2.388121 GCGTCAATGCAGGATAAATGC 58.612 47.619 0.00 0.00 44.11 3.56
2599 2688 2.287644 CGTCAATGCAGGATAAATGCGA 59.712 45.455 0.00 0.00 46.87 5.10
2601 2690 4.470462 GTCAATGCAGGATAAATGCGATC 58.530 43.478 0.00 0.00 46.87 3.69
2607 2696 3.064545 GCAGGATAAATGCGATCCATAGC 59.935 47.826 4.57 2.16 44.71 2.97
2619 2708 3.551046 CGATCCATAGCTGGTAGTGTGAC 60.551 52.174 0.00 0.00 43.61 3.67
2621 2710 4.245251 TCCATAGCTGGTAGTGTGACTA 57.755 45.455 0.00 0.00 43.61 2.59
2622 2711 4.606210 TCCATAGCTGGTAGTGTGACTAA 58.394 43.478 0.00 0.00 43.61 2.24
2656 2746 5.646360 CACGTATGGTTAGAAATTGGAAGGT 59.354 40.000 0.00 0.00 0.00 3.50
2658 2748 5.296035 CGTATGGTTAGAAATTGGAAGGTCC 59.704 44.000 0.00 0.00 36.96 4.46
2709 2799 2.283298 AGTGCATGATCGATTGGTGTC 58.717 47.619 0.00 0.00 0.00 3.67
2710 2800 1.004610 GTGCATGATCGATTGGTGTCG 60.005 52.381 0.00 0.00 42.74 4.35
2711 2801 1.290203 GCATGATCGATTGGTGTCGT 58.710 50.000 0.00 0.00 42.07 4.34
2712 2802 2.159170 TGCATGATCGATTGGTGTCGTA 60.159 45.455 0.00 0.00 42.07 3.43
2713 2803 2.863740 GCATGATCGATTGGTGTCGTAA 59.136 45.455 0.00 0.00 42.07 3.18
2714 2804 3.060272 GCATGATCGATTGGTGTCGTAAG 60.060 47.826 0.00 0.00 42.07 2.34
2715 2805 3.861276 TGATCGATTGGTGTCGTAAGT 57.139 42.857 0.00 0.00 42.07 2.24
2716 2806 4.182693 TGATCGATTGGTGTCGTAAGTT 57.817 40.909 0.00 0.00 42.07 2.66
2717 2807 4.562082 TGATCGATTGGTGTCGTAAGTTT 58.438 39.130 0.00 0.00 42.07 2.66
2718 2808 4.387559 TGATCGATTGGTGTCGTAAGTTTG 59.612 41.667 0.00 0.00 42.07 2.93
2719 2809 3.979948 TCGATTGGTGTCGTAAGTTTGA 58.020 40.909 0.00 0.00 42.07 2.69
2720 2810 4.562082 TCGATTGGTGTCGTAAGTTTGAT 58.438 39.130 0.00 0.00 42.07 2.57
2721 2811 4.992319 TCGATTGGTGTCGTAAGTTTGATT 59.008 37.500 0.00 0.00 42.07 2.57
2722 2812 5.467399 TCGATTGGTGTCGTAAGTTTGATTT 59.533 36.000 0.00 0.00 42.07 2.17
2723 2813 5.563751 CGATTGGTGTCGTAAGTTTGATTTG 59.436 40.000 0.00 0.00 36.88 2.32
2724 2814 5.821516 TTGGTGTCGTAAGTTTGATTTGT 57.178 34.783 0.00 0.00 39.48 2.83
2725 2815 5.163302 TGGTGTCGTAAGTTTGATTTGTG 57.837 39.130 0.00 0.00 39.48 3.33
2726 2816 4.636648 TGGTGTCGTAAGTTTGATTTGTGT 59.363 37.500 0.00 0.00 39.48 3.72
2731 2821 5.031578 TCGTAAGTTTGATTTGTGTTGCAC 58.968 37.500 0.00 0.00 39.48 4.57
2733 2823 2.808244 AGTTTGATTTGTGTTGCACGG 58.192 42.857 0.00 0.00 37.14 4.94
2762 2852 6.325919 TGGGAATTTGTACTGATGTGTTTC 57.674 37.500 0.00 0.00 0.00 2.78
2766 2856 6.915843 GGAATTTGTACTGATGTGTTTCGTTT 59.084 34.615 0.00 0.00 0.00 3.60
2775 2865 3.863396 TGTGTTTCGTTTCACCGTATG 57.137 42.857 0.00 0.00 34.14 2.39
2777 2867 3.622163 TGTGTTTCGTTTCACCGTATGTT 59.378 39.130 0.00 0.00 34.14 2.71
2782 2872 5.980698 TTCGTTTCACCGTATGTTAAACA 57.019 34.783 0.00 0.00 39.81 2.83
2792 2882 9.438228 TCACCGTATGTTAAACATAGAATTTGA 57.562 29.630 0.00 0.00 41.31 2.69
2856 2971 6.070481 ACAACCTTTTGTCCCAAATAAGTTGT 60.070 34.615 17.57 17.57 42.67 3.32
2864 2979 5.548836 TGTCCCAAATAAGTTGTAGTAGGGT 59.451 40.000 0.00 0.00 35.23 4.34
2865 2980 6.730038 TGTCCCAAATAAGTTGTAGTAGGGTA 59.270 38.462 0.00 0.00 35.23 3.69
2866 2981 7.093201 TGTCCCAAATAAGTTGTAGTAGGGTAG 60.093 40.741 0.00 0.00 35.23 3.18
2867 2982 7.124750 GTCCCAAATAAGTTGTAGTAGGGTAGA 59.875 40.741 0.00 0.00 35.23 2.59
2868 2983 7.679453 TCCCAAATAAGTTGTAGTAGGGTAGAA 59.321 37.037 0.00 0.00 35.23 2.10
2869 2984 8.323567 CCCAAATAAGTTGTAGTAGGGTAGAAA 58.676 37.037 0.00 0.00 35.23 2.52
2870 2985 9.901172 CCAAATAAGTTGTAGTAGGGTAGAAAT 57.099 33.333 0.00 0.00 35.23 2.17
2883 2998 9.668497 AGTAGGGTAGAAATAAAACATCAGAAC 57.332 33.333 0.00 0.00 0.00 3.01
2884 2999 7.939784 AGGGTAGAAATAAAACATCAGAACC 57.060 36.000 0.00 0.00 0.00 3.62
2885 3000 7.699878 AGGGTAGAAATAAAACATCAGAACCT 58.300 34.615 0.00 0.00 0.00 3.50
2886 3001 7.611855 AGGGTAGAAATAAAACATCAGAACCTG 59.388 37.037 0.00 0.00 0.00 4.00
2887 3002 7.148069 GGGTAGAAATAAAACATCAGAACCTGG 60.148 40.741 0.00 0.00 31.51 4.45
2888 3003 7.610305 GGTAGAAATAAAACATCAGAACCTGGA 59.390 37.037 0.00 0.00 31.51 3.86
2889 3004 9.010029 GTAGAAATAAAACATCAGAACCTGGAA 57.990 33.333 0.00 0.00 31.51 3.53
2890 3005 8.115490 AGAAATAAAACATCAGAACCTGGAAG 57.885 34.615 0.00 0.00 31.51 3.46
2891 3006 7.944554 AGAAATAAAACATCAGAACCTGGAAGA 59.055 33.333 0.00 0.00 34.07 2.87
2892 3007 7.693969 AATAAAACATCAGAACCTGGAAGAG 57.306 36.000 0.00 0.00 34.07 2.85
2894 3009 2.907892 ACATCAGAACCTGGAAGAGGA 58.092 47.619 0.00 0.00 46.33 3.71
2895 3010 2.836981 ACATCAGAACCTGGAAGAGGAG 59.163 50.000 0.00 0.00 46.33 3.69
2896 3011 3.102972 CATCAGAACCTGGAAGAGGAGA 58.897 50.000 0.00 0.00 46.33 3.71
2897 3012 2.813907 TCAGAACCTGGAAGAGGAGAG 58.186 52.381 0.00 0.00 46.33 3.20
2898 3013 2.380249 TCAGAACCTGGAAGAGGAGAGA 59.620 50.000 0.00 0.00 46.33 3.10
2899 3014 3.012274 TCAGAACCTGGAAGAGGAGAGAT 59.988 47.826 0.00 0.00 46.33 2.75
2900 3015 3.132646 CAGAACCTGGAAGAGGAGAGATG 59.867 52.174 0.00 0.00 46.33 2.90
2901 3016 2.173126 ACCTGGAAGAGGAGAGATGG 57.827 55.000 0.00 0.00 46.33 3.51
2902 3017 1.364328 ACCTGGAAGAGGAGAGATGGT 59.636 52.381 0.00 0.00 46.33 3.55
2903 3018 2.587777 ACCTGGAAGAGGAGAGATGGTA 59.412 50.000 0.00 0.00 46.33 3.25
2904 3019 3.230134 CCTGGAAGAGGAGAGATGGTAG 58.770 54.545 0.00 0.00 46.33 3.18
2905 3020 3.373658 CCTGGAAGAGGAGAGATGGTAGT 60.374 52.174 0.00 0.00 46.33 2.73
2906 3021 4.141135 CCTGGAAGAGGAGAGATGGTAGTA 60.141 50.000 0.00 0.00 46.33 1.82
2907 3022 4.794334 TGGAAGAGGAGAGATGGTAGTAC 58.206 47.826 0.00 0.00 0.00 2.73
2908 3023 4.229812 TGGAAGAGGAGAGATGGTAGTACA 59.770 45.833 2.06 0.00 0.00 2.90
2909 3024 5.202004 GGAAGAGGAGAGATGGTAGTACAA 58.798 45.833 2.06 0.00 0.00 2.41
2910 3025 5.836358 GGAAGAGGAGAGATGGTAGTACAAT 59.164 44.000 2.06 0.00 0.00 2.71
2911 3026 6.325286 GGAAGAGGAGAGATGGTAGTACAATT 59.675 42.308 2.06 0.00 0.00 2.32
2912 3027 7.506261 GGAAGAGGAGAGATGGTAGTACAATTA 59.494 40.741 2.06 0.00 0.00 1.40
2913 3028 8.840200 AAGAGGAGAGATGGTAGTACAATTAA 57.160 34.615 2.06 0.00 0.00 1.40
2914 3029 8.840200 AGAGGAGAGATGGTAGTACAATTAAA 57.160 34.615 2.06 0.00 0.00 1.52
2915 3030 8.697292 AGAGGAGAGATGGTAGTACAATTAAAC 58.303 37.037 2.06 0.00 0.00 2.01
2916 3031 8.375493 AGGAGAGATGGTAGTACAATTAAACA 57.625 34.615 2.06 0.00 0.00 2.83
2917 3032 8.822805 AGGAGAGATGGTAGTACAATTAAACAA 58.177 33.333 2.06 0.00 0.00 2.83
2918 3033 9.444600 GGAGAGATGGTAGTACAATTAAACAAA 57.555 33.333 2.06 0.00 0.00 2.83
2925 3040 9.492973 TGGTAGTACAATTAAACAAAGTACTCC 57.507 33.333 6.80 8.81 42.95 3.85
2926 3041 9.492973 GGTAGTACAATTAAACAAAGTACTCCA 57.507 33.333 6.80 0.00 42.95 3.86
2929 3044 9.227777 AGTACAATTAAACAAAGTACTCCATCC 57.772 33.333 0.00 0.00 40.84 3.51
2930 3045 7.141100 ACAATTAAACAAAGTACTCCATCCG 57.859 36.000 0.00 0.00 0.00 4.18
2931 3046 6.713450 ACAATTAAACAAAGTACTCCATCCGT 59.287 34.615 0.00 0.00 0.00 4.69
2932 3047 7.229907 ACAATTAAACAAAGTACTCCATCCGTT 59.770 33.333 0.00 0.00 0.00 4.44
2933 3048 7.754851 ATTAAACAAAGTACTCCATCCGTTT 57.245 32.000 0.00 3.14 0.00 3.60
2934 3049 5.684550 AAACAAAGTACTCCATCCGTTTC 57.315 39.130 0.00 0.00 0.00 2.78
2935 3050 4.618920 ACAAAGTACTCCATCCGTTTCT 57.381 40.909 0.00 0.00 0.00 2.52
2936 3051 4.969484 ACAAAGTACTCCATCCGTTTCTT 58.031 39.130 0.00 0.00 0.00 2.52
2937 3052 5.374071 ACAAAGTACTCCATCCGTTTCTTT 58.626 37.500 0.00 0.00 0.00 2.52
2938 3053 5.826208 ACAAAGTACTCCATCCGTTTCTTTT 59.174 36.000 0.00 0.00 0.00 2.27
2939 3054 6.320418 ACAAAGTACTCCATCCGTTTCTTTTT 59.680 34.615 0.00 0.00 0.00 1.94
2962 3077 9.809096 TTTTTGTCTGCACATAAAATTGTCTAA 57.191 25.926 0.00 0.00 32.46 2.10
2963 3078 9.809096 TTTTGTCTGCACATAAAATTGTCTAAA 57.191 25.926 0.00 0.00 30.55 1.85
2964 3079 9.462174 TTTGTCTGCACATAAAATTGTCTAAAG 57.538 29.630 0.00 0.00 30.55 1.85
2965 3080 8.165239 TGTCTGCACATAAAATTGTCTAAAGT 57.835 30.769 0.00 0.00 0.00 2.66
2966 3081 8.289618 TGTCTGCACATAAAATTGTCTAAAGTC 58.710 33.333 0.00 0.00 0.00 3.01
2967 3082 8.289618 GTCTGCACATAAAATTGTCTAAAGTCA 58.710 33.333 0.00 0.00 0.00 3.41
2968 3083 8.845227 TCTGCACATAAAATTGTCTAAAGTCAA 58.155 29.630 0.00 0.00 0.00 3.18
2969 3084 9.462174 CTGCACATAAAATTGTCTAAAGTCAAA 57.538 29.630 0.00 0.00 0.00 2.69
2970 3085 9.243637 TGCACATAAAATTGTCTAAAGTCAAAC 57.756 29.630 0.00 0.00 0.00 2.93
2971 3086 9.463443 GCACATAAAATTGTCTAAAGTCAAACT 57.537 29.630 0.00 0.00 0.00 2.66
3031 3146 9.726232 ATCAAGATTCACAATACGAAATCAATG 57.274 29.630 0.00 0.00 0.00 2.82
3032 3147 8.729756 TCAAGATTCACAATACGAAATCAATGT 58.270 29.630 0.00 0.00 0.00 2.71
3033 3148 9.003112 CAAGATTCACAATACGAAATCAATGTC 57.997 33.333 0.00 0.00 0.00 3.06
3034 3149 8.267620 AGATTCACAATACGAAATCAATGTCA 57.732 30.769 0.00 0.00 0.00 3.58
3035 3150 8.896744 AGATTCACAATACGAAATCAATGTCAT 58.103 29.630 0.00 0.00 0.00 3.06
3036 3151 9.507280 GATTCACAATACGAAATCAATGTCATT 57.493 29.630 0.00 0.00 0.00 2.57
3038 3153 9.986833 TTCACAATACGAAATCAATGTCATTAG 57.013 29.630 0.00 0.00 0.00 1.73
3039 3154 9.377312 TCACAATACGAAATCAATGTCATTAGA 57.623 29.630 0.00 0.00 0.00 2.10
3042 3157 9.110617 CAATACGAAATCAATGTCATTAGATGC 57.889 33.333 0.00 1.18 0.00 3.91
3043 3158 6.682423 ACGAAATCAATGTCATTAGATGCA 57.318 33.333 0.00 0.00 0.00 3.96
3044 3159 7.268199 ACGAAATCAATGTCATTAGATGCAT 57.732 32.000 0.00 0.00 0.00 3.96
3045 3160 7.136772 ACGAAATCAATGTCATTAGATGCATG 58.863 34.615 2.46 0.00 30.98 4.06
3046 3161 7.012610 ACGAAATCAATGTCATTAGATGCATGA 59.987 33.333 2.46 0.00 30.98 3.07
3047 3162 8.021396 CGAAATCAATGTCATTAGATGCATGAT 58.979 33.333 2.46 0.00 33.22 2.45
3089 3204 9.733556 ATACAACTTTCATATTGTAGGTGTTGA 57.266 29.630 0.00 0.00 42.82 3.18
3090 3205 8.635765 ACAACTTTCATATTGTAGGTGTTGAT 57.364 30.769 0.00 0.00 35.09 2.57
3091 3206 9.733556 ACAACTTTCATATTGTAGGTGTTGATA 57.266 29.630 0.00 0.00 35.09 2.15
3123 3238 9.853555 TTAATATACATTTGGTCAAGCTTTGTG 57.146 29.630 0.00 0.00 0.00 3.33
3124 3239 5.789643 ATACATTTGGTCAAGCTTTGTGT 57.210 34.783 0.00 0.00 0.00 3.72
3125 3240 4.045636 ACATTTGGTCAAGCTTTGTGTC 57.954 40.909 0.00 0.00 0.00 3.67
3126 3241 2.842208 TTTGGTCAAGCTTTGTGTCG 57.158 45.000 0.00 0.00 0.00 4.35
3127 3242 1.745232 TTGGTCAAGCTTTGTGTCGT 58.255 45.000 0.00 0.00 0.00 4.34
3128 3243 1.745232 TGGTCAAGCTTTGTGTCGTT 58.255 45.000 0.00 0.00 0.00 3.85
3129 3244 2.088423 TGGTCAAGCTTTGTGTCGTTT 58.912 42.857 0.00 0.00 0.00 3.60
3130 3245 2.159448 TGGTCAAGCTTTGTGTCGTTTG 60.159 45.455 0.00 0.00 0.00 2.93
3131 3246 2.096819 GGTCAAGCTTTGTGTCGTTTGA 59.903 45.455 0.00 0.00 0.00 2.69
3132 3247 3.098636 GTCAAGCTTTGTGTCGTTTGAC 58.901 45.455 0.00 0.00 45.71 3.18
3133 3248 3.006940 TCAAGCTTTGTGTCGTTTGACT 58.993 40.909 0.00 0.00 45.70 3.41
3134 3249 3.438781 TCAAGCTTTGTGTCGTTTGACTT 59.561 39.130 0.00 0.00 45.70 3.01
3135 3250 3.675467 AGCTTTGTGTCGTTTGACTTC 57.325 42.857 0.00 0.00 45.70 3.01
3136 3251 3.006940 AGCTTTGTGTCGTTTGACTTCA 58.993 40.909 0.00 0.00 45.70 3.02
3137 3252 3.627577 AGCTTTGTGTCGTTTGACTTCAT 59.372 39.130 0.00 0.00 45.70 2.57
3138 3253 4.814234 AGCTTTGTGTCGTTTGACTTCATA 59.186 37.500 0.00 0.00 45.70 2.15
3139 3254 4.904154 GCTTTGTGTCGTTTGACTTCATAC 59.096 41.667 0.00 0.00 45.70 2.39
3140 3255 5.503357 GCTTTGTGTCGTTTGACTTCATACA 60.503 40.000 1.55 0.00 45.70 2.29
3141 3256 6.424176 TTTGTGTCGTTTGACTTCATACAA 57.576 33.333 1.55 0.00 45.70 2.41
3142 3257 6.424176 TTGTGTCGTTTGACTTCATACAAA 57.576 33.333 0.00 0.00 45.70 2.83
3143 3258 6.612247 TGTGTCGTTTGACTTCATACAAAT 57.388 33.333 0.00 0.00 45.70 2.32
3144 3259 6.655062 TGTGTCGTTTGACTTCATACAAATC 58.345 36.000 0.00 0.00 45.70 2.17
3145 3260 6.481976 TGTGTCGTTTGACTTCATACAAATCT 59.518 34.615 0.00 0.00 45.70 2.40
3146 3261 7.011950 TGTGTCGTTTGACTTCATACAAATCTT 59.988 33.333 0.00 0.00 45.70 2.40
3147 3262 8.492748 GTGTCGTTTGACTTCATACAAATCTTA 58.507 33.333 0.00 0.00 45.70 2.10
3148 3263 9.214957 TGTCGTTTGACTTCATACAAATCTTAT 57.785 29.630 0.00 0.00 45.70 1.73
3175 3290 8.076178 AGTACATGAATTCAAAAGAAACGAAGG 58.924 33.333 13.09 0.00 0.00 3.46
3176 3291 6.215845 ACATGAATTCAAAAGAAACGAAGGG 58.784 36.000 13.09 0.00 0.00 3.95
3177 3292 6.040391 ACATGAATTCAAAAGAAACGAAGGGA 59.960 34.615 13.09 0.00 0.00 4.20
3178 3293 6.072112 TGAATTCAAAAGAAACGAAGGGAG 57.928 37.500 5.45 0.00 0.00 4.30
3179 3294 5.592688 TGAATTCAAAAGAAACGAAGGGAGT 59.407 36.000 5.45 0.00 0.00 3.85
3180 3295 6.768861 TGAATTCAAAAGAAACGAAGGGAGTA 59.231 34.615 5.45 0.00 0.00 2.59
3181 3296 7.447238 TGAATTCAAAAGAAACGAAGGGAGTAT 59.553 33.333 5.45 0.00 0.00 2.12
3182 3297 6.554334 TTCAAAAGAAACGAAGGGAGTATG 57.446 37.500 0.00 0.00 0.00 2.39
3183 3298 5.860611 TCAAAAGAAACGAAGGGAGTATGA 58.139 37.500 0.00 0.00 0.00 2.15
3184 3299 5.932303 TCAAAAGAAACGAAGGGAGTATGAG 59.068 40.000 0.00 0.00 0.00 2.90
3185 3300 4.473477 AAGAAACGAAGGGAGTATGAGG 57.527 45.455 0.00 0.00 0.00 3.86
3186 3301 2.168728 AGAAACGAAGGGAGTATGAGGC 59.831 50.000 0.00 0.00 0.00 4.70
3187 3302 1.568504 AACGAAGGGAGTATGAGGCA 58.431 50.000 0.00 0.00 0.00 4.75
3188 3303 1.568504 ACGAAGGGAGTATGAGGCAA 58.431 50.000 0.00 0.00 0.00 4.52
3189 3304 2.119495 ACGAAGGGAGTATGAGGCAAT 58.881 47.619 0.00 0.00 0.00 3.56
3190 3305 2.505819 ACGAAGGGAGTATGAGGCAATT 59.494 45.455 0.00 0.00 0.00 2.32
3191 3306 3.709653 ACGAAGGGAGTATGAGGCAATTA 59.290 43.478 0.00 0.00 0.00 1.40
3192 3307 4.202264 ACGAAGGGAGTATGAGGCAATTAG 60.202 45.833 0.00 0.00 0.00 1.73
3193 3308 4.646572 GAAGGGAGTATGAGGCAATTAGG 58.353 47.826 0.00 0.00 0.00 2.69
3194 3309 2.982488 AGGGAGTATGAGGCAATTAGGG 59.018 50.000 0.00 0.00 0.00 3.53
3195 3310 2.553247 GGGAGTATGAGGCAATTAGGGC 60.553 54.545 0.00 0.00 0.00 5.19
3196 3311 2.106511 GGAGTATGAGGCAATTAGGGCA 59.893 50.000 0.00 0.00 35.46 5.36
3197 3312 3.245052 GGAGTATGAGGCAATTAGGGCAT 60.245 47.826 0.00 0.00 35.46 4.40
3198 3313 4.006319 GAGTATGAGGCAATTAGGGCATC 58.994 47.826 0.00 0.00 42.03 3.91
3199 3314 3.654806 AGTATGAGGCAATTAGGGCATCT 59.345 43.478 0.00 0.00 42.18 2.90
3200 3315 3.607490 ATGAGGCAATTAGGGCATCTT 57.393 42.857 0.00 0.00 42.18 2.40
3201 3316 2.936202 TGAGGCAATTAGGGCATCTTC 58.064 47.619 0.00 0.00 42.18 2.87
3202 3317 2.241941 TGAGGCAATTAGGGCATCTTCA 59.758 45.455 0.00 0.00 42.18 3.02
3203 3318 3.290710 GAGGCAATTAGGGCATCTTCAA 58.709 45.455 0.00 0.00 38.88 2.69
3204 3319 3.026694 AGGCAATTAGGGCATCTTCAAC 58.973 45.455 0.00 0.00 35.46 3.18
3205 3320 2.223572 GGCAATTAGGGCATCTTCAACG 60.224 50.000 0.00 0.00 0.00 4.10
3206 3321 2.423538 GCAATTAGGGCATCTTCAACGT 59.576 45.455 0.00 0.00 0.00 3.99
3207 3322 3.119495 GCAATTAGGGCATCTTCAACGTT 60.119 43.478 0.00 0.00 0.00 3.99
3208 3323 4.414852 CAATTAGGGCATCTTCAACGTTG 58.585 43.478 22.35 22.35 0.00 4.10
3209 3324 3.410631 TTAGGGCATCTTCAACGTTGA 57.589 42.857 26.53 26.53 34.92 3.18
3210 3325 1.523758 AGGGCATCTTCAACGTTGAC 58.476 50.000 29.74 17.58 36.83 3.18
3211 3326 1.072331 AGGGCATCTTCAACGTTGACT 59.928 47.619 29.74 18.34 36.83 3.41
3212 3327 1.464997 GGGCATCTTCAACGTTGACTC 59.535 52.381 29.74 14.69 36.83 3.36
3213 3328 1.126846 GGCATCTTCAACGTTGACTCG 59.873 52.381 29.74 19.95 36.83 4.18
3214 3329 1.792949 GCATCTTCAACGTTGACTCGT 59.207 47.619 29.74 13.66 46.19 4.18
3215 3330 2.984471 GCATCTTCAACGTTGACTCGTA 59.016 45.455 29.74 14.42 43.38 3.43
3216 3331 3.427528 GCATCTTCAACGTTGACTCGTAA 59.572 43.478 29.74 13.69 43.38 3.18
3217 3332 4.084745 GCATCTTCAACGTTGACTCGTAAA 60.085 41.667 29.74 12.97 43.38 2.01
3218 3333 5.389516 GCATCTTCAACGTTGACTCGTAAAT 60.390 40.000 29.74 12.51 43.38 1.40
3219 3334 6.590357 CATCTTCAACGTTGACTCGTAAATT 58.410 36.000 29.74 5.58 43.38 1.82
3220 3335 6.592798 TCTTCAACGTTGACTCGTAAATTT 57.407 33.333 29.74 0.00 43.38 1.82
3221 3336 6.415702 TCTTCAACGTTGACTCGTAAATTTG 58.584 36.000 29.74 3.92 43.38 2.32
3222 3337 4.520078 TCAACGTTGACTCGTAAATTTGC 58.480 39.130 26.53 0.00 43.38 3.68
3223 3338 4.271533 TCAACGTTGACTCGTAAATTTGCT 59.728 37.500 26.53 0.00 43.38 3.91
3224 3339 4.806342 ACGTTGACTCGTAAATTTGCTT 57.194 36.364 0.00 0.00 42.35 3.91
3225 3340 5.164606 ACGTTGACTCGTAAATTTGCTTT 57.835 34.783 0.00 0.00 42.35 3.51
3226 3341 4.967575 ACGTTGACTCGTAAATTTGCTTTG 59.032 37.500 0.00 0.00 42.35 2.77
3227 3342 4.378616 CGTTGACTCGTAAATTTGCTTTGG 59.621 41.667 0.00 0.00 0.00 3.28
3228 3343 3.896122 TGACTCGTAAATTTGCTTTGGC 58.104 40.909 0.00 0.00 39.26 4.52
3237 3352 3.923013 TGCTTTGGCATCCATCCG 58.077 55.556 0.00 0.00 44.28 4.18
3238 3353 1.001020 TGCTTTGGCATCCATCCGT 60.001 52.632 0.00 0.00 44.28 4.69
3239 3354 1.314534 TGCTTTGGCATCCATCCGTG 61.315 55.000 0.00 0.00 44.28 4.94
3240 3355 1.031571 GCTTTGGCATCCATCCGTGA 61.032 55.000 0.00 0.00 38.54 4.35
3241 3356 1.462616 CTTTGGCATCCATCCGTGAA 58.537 50.000 0.00 0.00 31.53 3.18
3242 3357 1.133025 CTTTGGCATCCATCCGTGAAC 59.867 52.381 0.00 0.00 31.53 3.18
3243 3358 0.037447 TTGGCATCCATCCGTGAACA 59.963 50.000 0.00 0.00 31.53 3.18
3244 3359 0.255604 TGGCATCCATCCGTGAACAT 59.744 50.000 0.00 0.00 0.00 2.71
3245 3360 0.664761 GGCATCCATCCGTGAACATG 59.335 55.000 0.00 0.00 0.00 3.21
3246 3361 0.664761 GCATCCATCCGTGAACATGG 59.335 55.000 6.71 6.71 41.04 3.66
3247 3362 1.311859 CATCCATCCGTGAACATGGG 58.688 55.000 12.33 1.62 40.21 4.00
3248 3363 0.183492 ATCCATCCGTGAACATGGGG 59.817 55.000 12.33 7.42 40.21 4.96
3249 3364 1.453745 CCATCCGTGAACATGGGGG 60.454 63.158 12.33 10.54 36.62 5.40
3250 3365 1.607071 CATCCGTGAACATGGGGGA 59.393 57.895 12.33 0.00 38.05 4.81
3251 3366 0.183492 CATCCGTGAACATGGGGGAT 59.817 55.000 12.33 0.00 37.99 3.85
3252 3367 0.474184 ATCCGTGAACATGGGGGATC 59.526 55.000 12.33 0.00 38.05 3.36
3253 3368 0.912006 TCCGTGAACATGGGGGATCA 60.912 55.000 12.33 0.00 38.05 2.92
3254 3369 0.034574 CCGTGAACATGGGGGATCAA 60.035 55.000 5.25 0.00 33.82 2.57
3255 3370 1.410083 CCGTGAACATGGGGGATCAAT 60.410 52.381 5.25 0.00 33.82 2.57
3256 3371 1.949525 CGTGAACATGGGGGATCAATC 59.050 52.381 0.00 0.00 0.00 2.67
3257 3372 2.310538 GTGAACATGGGGGATCAATCC 58.689 52.381 0.00 0.01 46.41 3.01
3258 3373 2.091665 GTGAACATGGGGGATCAATCCT 60.092 50.000 8.87 0.00 46.35 3.24
3264 3379 2.528134 GGGGATCAATCCTCGGACA 58.472 57.895 8.87 0.00 46.35 4.02
3265 3380 1.059913 GGGGATCAATCCTCGGACAT 58.940 55.000 8.87 0.00 46.35 3.06
3266 3381 1.271054 GGGGATCAATCCTCGGACATG 60.271 57.143 8.87 0.00 46.35 3.21
3267 3382 1.271054 GGGATCAATCCTCGGACATGG 60.271 57.143 8.87 0.00 46.35 3.66
3268 3383 1.694150 GGATCAATCCTCGGACATGGA 59.306 52.381 0.00 0.00 43.73 3.41
3269 3384 2.304180 GGATCAATCCTCGGACATGGAT 59.696 50.000 0.00 0.00 44.21 3.41
3270 3385 2.916702 TCAATCCTCGGACATGGATG 57.083 50.000 0.00 0.00 41.76 3.51
3271 3386 1.202687 TCAATCCTCGGACATGGATGC 60.203 52.381 0.00 0.00 41.76 3.91
3272 3387 0.109342 AATCCTCGGACATGGATGCC 59.891 55.000 0.00 0.00 41.76 4.40
3273 3388 2.104572 ATCCTCGGACATGGATGCCG 62.105 60.000 13.18 13.18 43.69 5.69
3274 3389 2.280389 CTCGGACATGGATGCCGG 60.280 66.667 16.97 0.00 43.06 6.13
3275 3390 2.762043 TCGGACATGGATGCCGGA 60.762 61.111 5.05 0.00 43.06 5.14
3276 3391 2.280389 CGGACATGGATGCCGGAG 60.280 66.667 5.05 0.00 40.91 4.63
3277 3392 2.592861 GGACATGGATGCCGGAGC 60.593 66.667 5.05 0.00 40.48 4.70
3278 3393 2.592861 GACATGGATGCCGGAGCC 60.593 66.667 5.05 2.92 38.69 4.70
3279 3394 4.552365 ACATGGATGCCGGAGCCG 62.552 66.667 5.05 1.06 38.69 5.52
3292 3407 4.344865 AGCCGGCCGTCCAAACAT 62.345 61.111 26.15 0.00 0.00 2.71
3293 3408 3.370231 GCCGGCCGTCCAAACATT 61.370 61.111 26.12 0.00 0.00 2.71
3294 3409 2.926420 GCCGGCCGTCCAAACATTT 61.926 57.895 26.12 0.00 0.00 2.32
3295 3410 1.663173 CCGGCCGTCCAAACATTTT 59.337 52.632 26.12 0.00 0.00 1.82
3296 3411 0.032815 CCGGCCGTCCAAACATTTTT 59.967 50.000 26.12 0.00 0.00 1.94
3297 3412 1.414378 CGGCCGTCCAAACATTTTTC 58.586 50.000 19.50 0.00 0.00 2.29
3298 3413 1.790755 GGCCGTCCAAACATTTTTCC 58.209 50.000 0.00 0.00 0.00 3.13
3299 3414 1.414378 GCCGTCCAAACATTTTTCCG 58.586 50.000 0.00 0.00 0.00 4.30
3300 3415 1.001158 GCCGTCCAAACATTTTTCCGA 60.001 47.619 0.00 0.00 0.00 4.55
3301 3416 2.657184 CCGTCCAAACATTTTTCCGAC 58.343 47.619 0.00 0.00 0.00 4.79
3302 3417 2.033550 CCGTCCAAACATTTTTCCGACA 59.966 45.455 0.00 0.00 0.00 4.35
3303 3418 3.489398 CCGTCCAAACATTTTTCCGACAA 60.489 43.478 0.00 0.00 0.00 3.18
3304 3419 4.106197 CGTCCAAACATTTTTCCGACAAA 58.894 39.130 0.00 0.00 0.00 2.83
3305 3420 4.206200 CGTCCAAACATTTTTCCGACAAAG 59.794 41.667 0.00 0.00 0.00 2.77
3306 3421 4.026062 GTCCAAACATTTTTCCGACAAAGC 60.026 41.667 0.00 0.00 0.00 3.51
3307 3422 3.868077 CCAAACATTTTTCCGACAAAGCA 59.132 39.130 0.00 0.00 0.00 3.91
3308 3423 4.025813 CCAAACATTTTTCCGACAAAGCAG 60.026 41.667 0.00 0.00 0.00 4.24
3309 3424 4.647424 AACATTTTTCCGACAAAGCAGA 57.353 36.364 0.00 0.00 0.00 4.26
3310 3425 3.964909 ACATTTTTCCGACAAAGCAGAC 58.035 40.909 0.00 0.00 0.00 3.51
3311 3426 3.380004 ACATTTTTCCGACAAAGCAGACA 59.620 39.130 0.00 0.00 0.00 3.41
3312 3427 4.142271 ACATTTTTCCGACAAAGCAGACAA 60.142 37.500 0.00 0.00 0.00 3.18
3313 3428 4.442375 TTTTTCCGACAAAGCAGACAAA 57.558 36.364 0.00 0.00 0.00 2.83
3314 3429 4.647424 TTTTCCGACAAAGCAGACAAAT 57.353 36.364 0.00 0.00 0.00 2.32
3315 3430 4.647424 TTTCCGACAAAGCAGACAAATT 57.353 36.364 0.00 0.00 0.00 1.82
3316 3431 3.896648 TCCGACAAAGCAGACAAATTC 57.103 42.857 0.00 0.00 0.00 2.17
3317 3432 3.210227 TCCGACAAAGCAGACAAATTCA 58.790 40.909 0.00 0.00 0.00 2.57
3318 3433 3.820467 TCCGACAAAGCAGACAAATTCAT 59.180 39.130 0.00 0.00 0.00 2.57
3319 3434 3.916172 CCGACAAAGCAGACAAATTCATG 59.084 43.478 0.00 0.00 0.00 3.07
3320 3435 4.320421 CCGACAAAGCAGACAAATTCATGA 60.320 41.667 0.00 0.00 0.00 3.07
3321 3436 5.214417 CGACAAAGCAGACAAATTCATGAA 58.786 37.500 11.26 11.26 0.00 2.57
3322 3437 5.686841 CGACAAAGCAGACAAATTCATGAAA 59.313 36.000 13.09 0.00 0.00 2.69
3323 3438 6.198778 CGACAAAGCAGACAAATTCATGAAAA 59.801 34.615 13.09 0.00 0.00 2.29
3324 3439 7.237920 ACAAAGCAGACAAATTCATGAAAAC 57.762 32.000 13.09 2.82 0.00 2.43
3325 3440 6.817641 ACAAAGCAGACAAATTCATGAAAACA 59.182 30.769 13.09 0.00 0.00 2.83
3326 3441 6.833342 AAGCAGACAAATTCATGAAAACAC 57.167 33.333 13.09 3.86 0.00 3.32
3327 3442 5.904941 AGCAGACAAATTCATGAAAACACA 58.095 33.333 13.09 0.00 0.00 3.72
3328 3443 6.339730 AGCAGACAAATTCATGAAAACACAA 58.660 32.000 13.09 0.00 0.00 3.33
3329 3444 6.256321 AGCAGACAAATTCATGAAAACACAAC 59.744 34.615 13.09 1.81 0.00 3.32
3330 3445 6.630015 CAGACAAATTCATGAAAACACAACG 58.370 36.000 13.09 0.00 0.00 4.10
3331 3446 5.748152 AGACAAATTCATGAAAACACAACGG 59.252 36.000 13.09 0.00 0.00 4.44
3332 3447 5.655488 ACAAATTCATGAAAACACAACGGA 58.345 33.333 13.09 0.00 0.00 4.69
3333 3448 6.279882 ACAAATTCATGAAAACACAACGGAT 58.720 32.000 13.09 0.00 0.00 4.18
3334 3449 6.760770 ACAAATTCATGAAAACACAACGGATT 59.239 30.769 13.09 0.00 0.00 3.01
3335 3450 7.279758 ACAAATTCATGAAAACACAACGGATTT 59.720 29.630 13.09 0.99 0.00 2.17
3336 3451 7.406799 AATTCATGAAAACACAACGGATTTC 57.593 32.000 13.09 0.00 33.48 2.17
3337 3452 5.506686 TCATGAAAACACAACGGATTTCA 57.493 34.783 0.00 2.69 43.53 2.69
3339 3454 7.208225 TCATGAAAACACAACGGATTTCATA 57.792 32.000 11.04 0.96 45.68 2.15
3340 3455 7.081349 TCATGAAAACACAACGGATTTCATAC 58.919 34.615 11.04 0.00 45.68 2.39
3341 3456 6.378710 TGAAAACACAACGGATTTCATACA 57.621 33.333 0.00 0.00 36.99 2.29
3342 3457 6.796426 TGAAAACACAACGGATTTCATACAA 58.204 32.000 0.00 0.00 36.99 2.41
3343 3458 7.258441 TGAAAACACAACGGATTTCATACAAA 58.742 30.769 0.00 0.00 36.99 2.83
3344 3459 7.221067 TGAAAACACAACGGATTTCATACAAAC 59.779 33.333 0.00 0.00 36.99 2.93
3345 3460 6.385649 AACACAACGGATTTCATACAAACT 57.614 33.333 0.00 0.00 0.00 2.66
3346 3461 5.757886 ACACAACGGATTTCATACAAACTG 58.242 37.500 0.00 0.00 0.00 3.16
3347 3462 5.153513 CACAACGGATTTCATACAAACTGG 58.846 41.667 0.00 0.00 0.00 4.00
3348 3463 5.049060 CACAACGGATTTCATACAAACTGGA 60.049 40.000 0.00 0.00 0.00 3.86
3349 3464 5.710099 ACAACGGATTTCATACAAACTGGAT 59.290 36.000 0.00 0.00 0.00 3.41
3350 3465 5.818136 ACGGATTTCATACAAACTGGATG 57.182 39.130 0.00 0.00 40.07 3.51
3351 3466 5.496556 ACGGATTTCATACAAACTGGATGA 58.503 37.500 0.00 0.00 45.46 2.92
3358 3473 6.839124 TCATACAAACTGGATGAAAGCATT 57.161 33.333 0.00 0.00 44.26 3.56
3359 3474 7.230849 TCATACAAACTGGATGAAAGCATTT 57.769 32.000 0.00 0.00 44.26 2.32
3360 3475 8.347004 TCATACAAACTGGATGAAAGCATTTA 57.653 30.769 0.00 0.00 44.26 1.40
3361 3476 8.243426 TCATACAAACTGGATGAAAGCATTTAC 58.757 33.333 0.00 0.00 44.26 2.01
3362 3477 6.403866 ACAAACTGGATGAAAGCATTTACA 57.596 33.333 0.00 0.00 39.27 2.41
3363 3478 6.996509 ACAAACTGGATGAAAGCATTTACAT 58.003 32.000 0.00 0.00 39.27 2.29
3364 3479 7.444299 ACAAACTGGATGAAAGCATTTACATT 58.556 30.769 0.00 0.00 39.27 2.71
3365 3480 7.933033 ACAAACTGGATGAAAGCATTTACATTT 59.067 29.630 0.00 0.00 39.27 2.32
3366 3481 8.776470 CAAACTGGATGAAAGCATTTACATTTT 58.224 29.630 0.00 0.00 39.27 1.82
3367 3482 7.894376 ACTGGATGAAAGCATTTACATTTTG 57.106 32.000 0.00 0.00 39.27 2.44
3368 3483 6.875195 ACTGGATGAAAGCATTTACATTTTGG 59.125 34.615 0.00 0.00 39.27 3.28
3369 3484 7.002250 TGGATGAAAGCATTTACATTTTGGA 57.998 32.000 0.00 0.00 39.27 3.53
3370 3485 6.873076 TGGATGAAAGCATTTACATTTTGGAC 59.127 34.615 0.00 0.00 39.27 4.02
3371 3486 6.873076 GGATGAAAGCATTTACATTTTGGACA 59.127 34.615 0.00 0.00 39.27 4.02
3372 3487 7.550196 GGATGAAAGCATTTACATTTTGGACAT 59.450 33.333 0.00 0.00 39.27 3.06
3373 3488 7.887996 TGAAAGCATTTACATTTTGGACATC 57.112 32.000 0.00 0.00 39.27 3.06
3374 3489 7.669427 TGAAAGCATTTACATTTTGGACATCT 58.331 30.769 0.00 0.00 39.27 2.90
3375 3490 8.149647 TGAAAGCATTTACATTTTGGACATCTT 58.850 29.630 0.00 0.00 39.27 2.40
3376 3491 8.907222 AAAGCATTTACATTTTGGACATCTTT 57.093 26.923 0.00 0.00 35.86 2.52
3377 3492 8.907222 AAGCATTTACATTTTGGACATCTTTT 57.093 26.923 0.00 0.00 0.00 2.27
3378 3493 9.995003 AAGCATTTACATTTTGGACATCTTTTA 57.005 25.926 0.00 0.00 0.00 1.52
3379 3494 9.423061 AGCATTTACATTTTGGACATCTTTTAC 57.577 29.630 0.00 0.00 0.00 2.01
3380 3495 8.655970 GCATTTACATTTTGGACATCTTTTACC 58.344 33.333 0.00 0.00 0.00 2.85
3381 3496 9.927668 CATTTACATTTTGGACATCTTTTACCT 57.072 29.630 0.00 0.00 0.00 3.08
3386 3501 8.585018 ACATTTTGGACATCTTTTACCTAAAGG 58.415 33.333 0.00 0.00 42.88 3.11
3402 3517 6.190954 CCTAAAGGTTAAACTATGTGCACC 57.809 41.667 15.69 0.00 0.00 5.01
3403 3518 5.944007 CCTAAAGGTTAAACTATGTGCACCT 59.056 40.000 15.69 7.20 36.12 4.00
3404 3519 5.959618 AAAGGTTAAACTATGTGCACCTC 57.040 39.130 15.69 0.00 33.32 3.85
3405 3520 3.951663 AGGTTAAACTATGTGCACCTCC 58.048 45.455 15.69 0.00 27.75 4.30
3406 3521 2.676342 GGTTAAACTATGTGCACCTCCG 59.324 50.000 15.69 2.63 0.00 4.63
3407 3522 2.676342 GTTAAACTATGTGCACCTCCGG 59.324 50.000 15.69 0.00 0.00 5.14
3408 3523 0.676782 AAACTATGTGCACCTCCGGC 60.677 55.000 15.69 0.00 0.00 6.13
3409 3524 2.203070 CTATGTGCACCTCCGGCC 60.203 66.667 15.69 0.00 0.00 6.13
3410 3525 4.155733 TATGTGCACCTCCGGCCG 62.156 66.667 21.04 21.04 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.118236 GTCAAGAACAATTTTCTAAGTGTATGC 57.882 33.333 0.00 0.00 41.31 3.14
126 128 7.554476 AGAGGGAGCATGTTAAAATTACTCTTC 59.446 37.037 0.00 4.87 0.00 2.87
171 180 8.700973 AGATTAACTCTTACCTTCTGATCTTCC 58.299 37.037 0.00 0.00 0.00 3.46
173 182 9.261035 TCAGATTAACTCTTACCTTCTGATCTT 57.739 33.333 0.00 0.00 34.72 2.40
176 185 7.400339 TGGTCAGATTAACTCTTACCTTCTGAT 59.600 37.037 14.22 0.00 45.15 2.90
199 208 8.650143 ACCATTGATTTGATTTAAGTAGTGGT 57.350 30.769 0.00 0.00 0.00 4.16
209 218 7.890127 TGGTCTCTCTTACCATTGATTTGATTT 59.110 33.333 0.00 0.00 42.10 2.17
210 219 7.405292 TGGTCTCTCTTACCATTGATTTGATT 58.595 34.615 0.00 0.00 42.10 2.57
225 234 6.153510 GGGAAAATTTTAGCATGGTCTCTCTT 59.846 38.462 0.00 0.00 0.00 2.85
307 316 9.658799 TGTAATGAACAAATTTGAAAAACTGGA 57.341 25.926 24.64 0.00 34.29 3.86
366 377 4.776795 AACATTTTACAAGCGTTAGGGG 57.223 40.909 0.00 0.00 0.00 4.79
454 469 7.976734 CCCAGTTTAAGTGTACAAACATTTTCA 59.023 33.333 10.05 0.00 36.91 2.69
461 476 6.988580 AGTCTACCCAGTTTAAGTGTACAAAC 59.011 38.462 0.00 0.00 35.36 2.93
481 496 6.227522 TCAAATTCATGACGTTTCCAGTCTA 58.772 36.000 0.00 0.00 39.24 2.59
485 500 5.630680 CCTTTCAAATTCATGACGTTTCCAG 59.369 40.000 0.00 0.00 0.00 3.86
487 502 5.768317 TCCTTTCAAATTCATGACGTTTCC 58.232 37.500 0.00 0.00 0.00 3.13
492 507 8.296799 TCATTTTTCCTTTCAAATTCATGACG 57.703 30.769 0.00 0.00 0.00 4.35
515 531 6.902771 TCGGGTTTTTATTTTCCATCTTCA 57.097 33.333 0.00 0.00 0.00 3.02
586 610 6.576662 TTCTGTGTTTCCTTGTTGTTGTTA 57.423 33.333 0.00 0.00 0.00 2.41
587 611 5.461032 TTCTGTGTTTCCTTGTTGTTGTT 57.539 34.783 0.00 0.00 0.00 2.83
588 612 5.461032 TTTCTGTGTTTCCTTGTTGTTGT 57.539 34.783 0.00 0.00 0.00 3.32
630 654 2.512973 GCTCCGGCTTTAGGTAGGA 58.487 57.895 0.00 0.00 35.22 2.94
771 795 1.208776 GTACCTTTGGCATAGGTCCGT 59.791 52.381 29.28 10.88 44.74 4.69
772 796 1.485066 AGTACCTTTGGCATAGGTCCG 59.515 52.381 29.28 5.28 44.74 4.79
774 798 3.707102 AGAGAGTACCTTTGGCATAGGTC 59.293 47.826 29.28 20.62 44.74 3.85
777 801 3.118629 TGCAGAGAGTACCTTTGGCATAG 60.119 47.826 0.00 0.00 0.00 2.23
779 803 1.630369 TGCAGAGAGTACCTTTGGCAT 59.370 47.619 0.00 0.00 0.00 4.40
811 855 2.598394 CCCAGCAAGGTGTGTGGG 60.598 66.667 4.11 4.11 40.18 4.61
812 856 1.898574 GACCCAGCAAGGTGTGTGG 60.899 63.158 1.86 0.00 41.42 4.17
813 857 0.538057 ATGACCCAGCAAGGTGTGTG 60.538 55.000 1.86 0.00 41.42 3.82
814 858 0.538057 CATGACCCAGCAAGGTGTGT 60.538 55.000 1.86 0.00 41.42 3.72
815 859 1.246056 CCATGACCCAGCAAGGTGTG 61.246 60.000 1.86 1.97 41.42 3.82
816 860 1.075482 CCATGACCCAGCAAGGTGT 59.925 57.895 1.86 0.00 41.42 4.16
820 864 0.034186 TTAGCCCATGACCCAGCAAG 60.034 55.000 0.00 0.00 0.00 4.01
842 886 1.808945 GCTGATAATTCATGGGCCTCG 59.191 52.381 4.53 0.00 0.00 4.63
854 898 2.525248 CGCACGTGCCGCTGATAAT 61.525 57.895 33.23 0.00 37.91 1.28
876 920 4.607114 GCTTTTATATGCTCGCGTTCTGAG 60.607 45.833 5.77 0.00 36.53 3.35
879 923 2.544267 GGCTTTTATATGCTCGCGTTCT 59.456 45.455 5.77 0.00 0.00 3.01
959 1003 2.359602 GCTGCTGCTGCTTCCTCA 60.360 61.111 22.10 0.00 40.48 3.86
989 1033 4.888325 CCGCCATCCCCCTCCTCT 62.888 72.222 0.00 0.00 0.00 3.69
990 1034 4.880426 TCCGCCATCCCCCTCCTC 62.880 72.222 0.00 0.00 0.00 3.71
993 1037 3.406595 CTTGTCCGCCATCCCCCTC 62.407 68.421 0.00 0.00 0.00 4.30
994 1038 3.411517 CTTGTCCGCCATCCCCCT 61.412 66.667 0.00 0.00 0.00 4.79
995 1039 2.893682 CTTCTTGTCCGCCATCCCCC 62.894 65.000 0.00 0.00 0.00 5.40
1096 1143 2.284625 TGACATCGCTGGGGAGGT 60.285 61.111 4.75 4.75 32.97 3.85
1103 1150 1.392853 GAGCAAGAAGTGACATCGCTG 59.607 52.381 0.00 0.00 36.72 5.18
1104 1151 1.719600 GAGCAAGAAGTGACATCGCT 58.280 50.000 0.00 0.00 38.54 4.93
1105 1152 0.368227 CGAGCAAGAAGTGACATCGC 59.632 55.000 0.00 0.00 0.00 4.58
1107 1154 0.723981 GGCGAGCAAGAAGTGACATC 59.276 55.000 0.00 0.00 0.00 3.06
1108 1155 1.016130 CGGCGAGCAAGAAGTGACAT 61.016 55.000 0.00 0.00 0.00 3.06
1109 1156 1.664649 CGGCGAGCAAGAAGTGACA 60.665 57.895 0.00 0.00 0.00 3.58
1110 1157 1.222115 AACGGCGAGCAAGAAGTGAC 61.222 55.000 16.62 0.00 0.00 3.67
1112 1159 1.493311 GAACGGCGAGCAAGAAGTG 59.507 57.895 16.62 0.00 0.00 3.16
1113 1160 1.668151 GGAACGGCGAGCAAGAAGT 60.668 57.895 16.62 0.00 0.00 3.01
1114 1161 3.169198 GGAACGGCGAGCAAGAAG 58.831 61.111 16.62 0.00 0.00 2.85
1135 1182 4.161295 TCAGATCTTGCGGCGGGG 62.161 66.667 9.78 0.00 0.00 5.73
1141 1188 2.158449 GTGAACCAAGTCAGATCTTGCG 59.842 50.000 0.00 0.00 42.16 4.85
1142 1189 2.485814 GGTGAACCAAGTCAGATCTTGC 59.514 50.000 0.00 0.00 42.16 4.01
1155 1202 4.612412 GGACGGCGTGGTGAACCA 62.612 66.667 21.19 0.00 45.30 3.67
1157 1204 3.041940 CAGGACGGCGTGGTGAAC 61.042 66.667 21.19 0.19 0.00 3.18
1179 1226 2.987413 TCAATGTTCGTGGCATGAAC 57.013 45.000 34.74 34.74 42.81 3.18
1199 1246 9.715121 ACAAACCGAAATCTCACTACTAATTAA 57.285 29.630 0.00 0.00 0.00 1.40
1200 1247 9.146984 CACAAACCGAAATCTCACTACTAATTA 57.853 33.333 0.00 0.00 0.00 1.40
1220 1267 1.069906 GCACGATCTCACACCACAAAC 60.070 52.381 0.00 0.00 0.00 2.93
1225 1272 1.212751 CGAGCACGATCTCACACCA 59.787 57.895 0.00 0.00 42.66 4.17
1230 1277 0.456824 GAACAGCGAGCACGATCTCA 60.457 55.000 8.01 0.00 42.66 3.27
1231 1278 0.179150 AGAACAGCGAGCACGATCTC 60.179 55.000 8.01 0.00 42.66 2.75
1265 1314 8.411683 GCATCAGGAAATTGTTCAATCTATTCT 58.588 33.333 0.00 0.00 35.25 2.40
1479 1532 2.548904 GCTCTCATCTGATGCATCAACC 59.451 50.000 28.39 3.38 36.18 3.77
1490 1543 2.364647 TGAGTATGCCAGCTCTCATCTG 59.635 50.000 0.83 0.00 32.95 2.90
1493 1546 2.629137 CTCTGAGTATGCCAGCTCTCAT 59.371 50.000 1.42 2.30 36.55 2.90
1494 1547 2.030371 CTCTGAGTATGCCAGCTCTCA 58.970 52.381 0.00 1.12 35.92 3.27
1502 1555 2.035321 GGTACAGCTCTCTGAGTATGCC 59.965 54.545 4.32 0.00 42.95 4.40
1503 1556 2.690497 TGGTACAGCTCTCTGAGTATGC 59.310 50.000 4.32 8.03 42.95 3.14
1542 1595 7.042335 GGATTACAACTAGTTGCATGAGTAGT 58.958 38.462 30.97 14.15 44.03 2.73
1809 1862 7.389053 CAGTGATATCCAAACTAGCCCTAATTC 59.611 40.741 0.00 0.00 0.00 2.17
1833 1886 7.919091 CCATGATAAGTGATTGGTTCAAATCAG 59.081 37.037 3.18 0.00 44.96 2.90
1895 1948 1.285280 AGTGTAGCCAGGTATGCCAA 58.715 50.000 1.54 0.00 37.19 4.52
1908 1961 3.380479 TTGAGTCGGACCAAAGTGTAG 57.620 47.619 4.14 0.00 0.00 2.74
1918 1971 0.531200 AGTTCGGGATTGAGTCGGAC 59.469 55.000 0.00 0.00 33.00 4.79
1958 2011 8.532819 AGGAGGTTAGTTCAATAACAAGTAGAG 58.467 37.037 0.09 0.00 37.38 2.43
1968 2021 9.268282 AGAATACTCAAGGAGGTTAGTTCAATA 57.732 33.333 0.00 0.00 33.35 1.90
2055 2119 5.362430 TCAATATTGATAAACTGGTTGGGCC 59.638 40.000 14.23 0.00 32.72 5.80
2056 2120 6.463995 TCAATATTGATAAACTGGTTGGGC 57.536 37.500 14.23 0.00 31.01 5.36
2094 2158 5.622346 AAGACTCAGAAGGGACCATATTC 57.378 43.478 0.00 0.00 0.00 1.75
2098 2162 7.510675 TTATAAAAGACTCAGAAGGGACCAT 57.489 36.000 0.00 0.00 0.00 3.55
2154 2218 2.099263 CCTGAGCTCTTTGATGGCATTG 59.901 50.000 16.19 0.00 0.00 2.82
2434 2499 7.043590 GCAATGCAAAATAACAGCTCATTCTAG 60.044 37.037 0.00 0.00 0.00 2.43
2482 2547 4.715534 TCCATACTCCAAAACTTCCACA 57.284 40.909 0.00 0.00 0.00 4.17
2585 2652 3.064545 GCTATGGATCGCATTTATCCTGC 59.935 47.826 3.93 2.73 42.94 4.85
2607 2696 7.012894 TGGAAAACATTTTAGTCACACTACCAG 59.987 37.037 0.00 0.00 28.93 4.00
2643 2732 2.880167 GCCTTCGGACCTTCCAATTTCT 60.880 50.000 0.00 0.00 35.91 2.52
2644 2733 1.472878 GCCTTCGGACCTTCCAATTTC 59.527 52.381 0.00 0.00 35.91 2.17
2656 2746 1.327303 AAAAAGCATGTGCCTTCGGA 58.673 45.000 0.57 0.00 43.38 4.55
2672 2762 6.816140 TCATGCACTATCTATCGACACAAAAA 59.184 34.615 0.00 0.00 0.00 1.94
2682 2772 6.255237 CACCAATCGATCATGCACTATCTATC 59.745 42.308 0.00 0.00 0.00 2.08
2709 2799 4.086327 CGTGCAACACAAATCAAACTTACG 60.086 41.667 0.00 0.00 35.74 3.18
2710 2800 4.206200 CCGTGCAACACAAATCAAACTTAC 59.794 41.667 0.00 0.00 35.74 2.34
2711 2801 4.142359 ACCGTGCAACACAAATCAAACTTA 60.142 37.500 0.00 0.00 35.74 2.24
2712 2802 3.186119 CCGTGCAACACAAATCAAACTT 58.814 40.909 0.00 0.00 35.74 2.66
2713 2803 2.165437 ACCGTGCAACACAAATCAAACT 59.835 40.909 0.00 0.00 35.74 2.66
2714 2804 2.535331 ACCGTGCAACACAAATCAAAC 58.465 42.857 0.00 0.00 35.74 2.93
2715 2805 2.949451 ACCGTGCAACACAAATCAAA 57.051 40.000 0.00 0.00 35.74 2.69
2716 2806 2.949451 AACCGTGCAACACAAATCAA 57.051 40.000 0.00 0.00 35.74 2.57
2717 2807 2.949451 AAACCGTGCAACACAAATCA 57.051 40.000 0.00 0.00 35.74 2.57
2739 2829 5.049060 CGAAACACATCAGTACAAATTCCCA 60.049 40.000 0.00 0.00 0.00 4.37
2740 2830 5.048991 ACGAAACACATCAGTACAAATTCCC 60.049 40.000 0.00 0.00 0.00 3.97
2751 2841 2.286833 ACGGTGAAACGAAACACATCAG 59.713 45.455 0.00 0.00 38.12 2.90
2766 2856 9.438228 TCAAATTCTATGTTTAACATACGGTGA 57.562 29.630 13.14 7.09 39.88 4.02
2792 2882 8.375506 TGTGGAACTGAGTTTATATGAAGACTT 58.624 33.333 0.00 0.00 38.04 3.01
2799 2913 9.987272 TCTGATATGTGGAACTGAGTTTATATG 57.013 33.333 0.00 0.00 38.04 1.78
2809 2923 7.848223 TGTTATTGTCTGATATGTGGAACTG 57.152 36.000 0.00 0.00 38.04 3.16
2811 2925 7.336931 AGGTTGTTATTGTCTGATATGTGGAAC 59.663 37.037 0.00 0.00 37.35 3.62
2864 2979 9.231297 CTTCCAGGTTCTGATGTTTTATTTCTA 57.769 33.333 0.00 0.00 32.44 2.10
2865 2980 7.944554 TCTTCCAGGTTCTGATGTTTTATTTCT 59.055 33.333 0.00 0.00 32.44 2.52
2866 2981 8.110860 TCTTCCAGGTTCTGATGTTTTATTTC 57.889 34.615 0.00 0.00 32.44 2.17
2867 2982 7.177392 CCTCTTCCAGGTTCTGATGTTTTATTT 59.823 37.037 0.00 0.00 37.53 1.40
2868 2983 6.660949 CCTCTTCCAGGTTCTGATGTTTTATT 59.339 38.462 0.00 0.00 37.53 1.40
2869 2984 6.012508 TCCTCTTCCAGGTTCTGATGTTTTAT 60.013 38.462 0.00 0.00 43.95 1.40
2870 2985 5.309543 TCCTCTTCCAGGTTCTGATGTTTTA 59.690 40.000 0.00 0.00 43.95 1.52
2871 2986 4.104738 TCCTCTTCCAGGTTCTGATGTTTT 59.895 41.667 0.00 0.00 43.95 2.43
2872 2987 3.652869 TCCTCTTCCAGGTTCTGATGTTT 59.347 43.478 0.00 0.00 43.95 2.83
2873 2988 3.251484 TCCTCTTCCAGGTTCTGATGTT 58.749 45.455 0.00 0.00 43.95 2.71
2874 2989 2.836981 CTCCTCTTCCAGGTTCTGATGT 59.163 50.000 0.00 0.00 43.95 3.06
2875 2990 3.102972 TCTCCTCTTCCAGGTTCTGATG 58.897 50.000 0.00 0.00 43.95 3.07
2876 2991 3.012274 TCTCTCCTCTTCCAGGTTCTGAT 59.988 47.826 0.00 0.00 43.95 2.90
2877 2992 2.380249 TCTCTCCTCTTCCAGGTTCTGA 59.620 50.000 0.00 0.00 43.95 3.27
2878 2993 2.813907 TCTCTCCTCTTCCAGGTTCTG 58.186 52.381 0.00 0.00 43.95 3.02
2879 2994 3.373830 CATCTCTCCTCTTCCAGGTTCT 58.626 50.000 0.00 0.00 43.95 3.01
2880 2995 2.433970 CCATCTCTCCTCTTCCAGGTTC 59.566 54.545 0.00 0.00 43.95 3.62
2881 2996 2.225753 ACCATCTCTCCTCTTCCAGGTT 60.226 50.000 0.00 0.00 43.95 3.50
2882 2997 1.364328 ACCATCTCTCCTCTTCCAGGT 59.636 52.381 0.00 0.00 43.95 4.00
2883 2998 2.173126 ACCATCTCTCCTCTTCCAGG 57.827 55.000 0.00 0.00 45.15 4.45
2884 2999 3.909732 ACTACCATCTCTCCTCTTCCAG 58.090 50.000 0.00 0.00 0.00 3.86
2885 3000 4.229812 TGTACTACCATCTCTCCTCTTCCA 59.770 45.833 0.00 0.00 0.00 3.53
2886 3001 4.794334 TGTACTACCATCTCTCCTCTTCC 58.206 47.826 0.00 0.00 0.00 3.46
2887 3002 6.969993 ATTGTACTACCATCTCTCCTCTTC 57.030 41.667 0.00 0.00 0.00 2.87
2888 3003 8.840200 TTAATTGTACTACCATCTCTCCTCTT 57.160 34.615 0.00 0.00 0.00 2.85
2889 3004 8.697292 GTTTAATTGTACTACCATCTCTCCTCT 58.303 37.037 0.00 0.00 0.00 3.69
2890 3005 8.475639 TGTTTAATTGTACTACCATCTCTCCTC 58.524 37.037 0.00 0.00 0.00 3.71
2891 3006 8.375493 TGTTTAATTGTACTACCATCTCTCCT 57.625 34.615 0.00 0.00 0.00 3.69
2892 3007 9.444600 TTTGTTTAATTGTACTACCATCTCTCC 57.555 33.333 0.00 0.00 0.00 3.71
2899 3014 9.492973 GGAGTACTTTGTTTAATTGTACTACCA 57.507 33.333 0.00 0.00 42.32 3.25
2900 3015 9.492973 TGGAGTACTTTGTTTAATTGTACTACC 57.507 33.333 10.21 10.27 41.72 3.18
2903 3018 9.227777 GGATGGAGTACTTTGTTTAATTGTACT 57.772 33.333 0.00 0.00 44.13 2.73
2904 3019 8.173130 CGGATGGAGTACTTTGTTTAATTGTAC 58.827 37.037 0.00 0.00 35.18 2.90
2905 3020 7.879160 ACGGATGGAGTACTTTGTTTAATTGTA 59.121 33.333 0.00 0.00 0.00 2.41
2906 3021 6.713450 ACGGATGGAGTACTTTGTTTAATTGT 59.287 34.615 0.00 0.00 0.00 2.71
2907 3022 7.141100 ACGGATGGAGTACTTTGTTTAATTG 57.859 36.000 0.00 0.00 0.00 2.32
2908 3023 7.754851 AACGGATGGAGTACTTTGTTTAATT 57.245 32.000 0.00 0.00 0.00 1.40
2909 3024 7.664318 AGAAACGGATGGAGTACTTTGTTTAAT 59.336 33.333 0.00 0.00 0.00 1.40
2910 3025 6.993902 AGAAACGGATGGAGTACTTTGTTTAA 59.006 34.615 0.00 0.00 0.00 1.52
2911 3026 6.527423 AGAAACGGATGGAGTACTTTGTTTA 58.473 36.000 0.00 0.00 0.00 2.01
2912 3027 5.374071 AGAAACGGATGGAGTACTTTGTTT 58.626 37.500 0.00 2.68 0.00 2.83
2913 3028 4.969484 AGAAACGGATGGAGTACTTTGTT 58.031 39.130 0.00 0.00 0.00 2.83
2914 3029 4.618920 AGAAACGGATGGAGTACTTTGT 57.381 40.909 0.00 0.00 0.00 2.83
2915 3030 5.941948 AAAGAAACGGATGGAGTACTTTG 57.058 39.130 0.00 0.00 32.05 2.77
2916 3031 6.954487 AAAAAGAAACGGATGGAGTACTTT 57.046 33.333 0.00 0.00 33.41 2.66
2936 3051 9.809096 TTAGACAATTTTATGTGCAGACAAAAA 57.191 25.926 3.99 6.30 35.11 1.94
2937 3052 9.809096 TTTAGACAATTTTATGTGCAGACAAAA 57.191 25.926 2.23 2.23 35.11 2.44
2938 3053 9.462174 CTTTAGACAATTTTATGTGCAGACAAA 57.538 29.630 0.00 0.00 35.11 2.83
2939 3054 8.629158 ACTTTAGACAATTTTATGTGCAGACAA 58.371 29.630 0.00 0.00 35.11 3.18
2940 3055 8.165239 ACTTTAGACAATTTTATGTGCAGACA 57.835 30.769 0.00 0.00 36.22 3.41
2941 3056 8.289618 TGACTTTAGACAATTTTATGTGCAGAC 58.710 33.333 0.00 0.00 32.57 3.51
2942 3057 8.389779 TGACTTTAGACAATTTTATGTGCAGA 57.610 30.769 0.00 0.00 32.57 4.26
2943 3058 9.462174 TTTGACTTTAGACAATTTTATGTGCAG 57.538 29.630 0.00 0.00 32.57 4.41
2944 3059 9.243637 GTTTGACTTTAGACAATTTTATGTGCA 57.756 29.630 0.00 0.00 32.57 4.57
2945 3060 9.463443 AGTTTGACTTTAGACAATTTTATGTGC 57.537 29.630 0.00 0.00 32.57 4.57
3005 3120 9.726232 CATTGATTTCGTATTGTGAATCTTGAT 57.274 29.630 0.00 0.00 0.00 2.57
3006 3121 8.729756 ACATTGATTTCGTATTGTGAATCTTGA 58.270 29.630 0.00 0.00 0.00 3.02
3007 3122 8.900511 ACATTGATTTCGTATTGTGAATCTTG 57.099 30.769 0.00 0.00 0.00 3.02
3008 3123 8.729756 TGACATTGATTTCGTATTGTGAATCTT 58.270 29.630 0.00 0.00 0.00 2.40
3009 3124 8.267620 TGACATTGATTTCGTATTGTGAATCT 57.732 30.769 0.00 0.00 0.00 2.40
3010 3125 9.507280 AATGACATTGATTTCGTATTGTGAATC 57.493 29.630 0.00 0.00 0.00 2.52
3012 3127 9.986833 CTAATGACATTGATTTCGTATTGTGAA 57.013 29.630 11.05 0.00 0.00 3.18
3013 3128 9.377312 TCTAATGACATTGATTTCGTATTGTGA 57.623 29.630 11.05 0.00 0.00 3.58
3016 3131 9.110617 GCATCTAATGACATTGATTTCGTATTG 57.889 33.333 11.05 1.62 0.00 1.90
3017 3132 8.839343 TGCATCTAATGACATTGATTTCGTATT 58.161 29.630 11.05 0.00 0.00 1.89
3018 3133 8.382030 TGCATCTAATGACATTGATTTCGTAT 57.618 30.769 11.05 0.00 0.00 3.06
3019 3134 7.784633 TGCATCTAATGACATTGATTTCGTA 57.215 32.000 11.05 0.00 0.00 3.43
3020 3135 6.682423 TGCATCTAATGACATTGATTTCGT 57.318 33.333 11.05 0.00 0.00 3.85
3021 3136 7.357303 TCATGCATCTAATGACATTGATTTCG 58.643 34.615 11.05 2.73 0.00 3.46
3063 3178 9.733556 TCAACACCTACAATATGAAAGTTGTAT 57.266 29.630 0.00 0.00 39.34 2.29
3064 3179 9.733556 ATCAACACCTACAATATGAAAGTTGTA 57.266 29.630 0.00 0.00 39.18 2.41
3065 3180 8.635765 ATCAACACCTACAATATGAAAGTTGT 57.364 30.769 0.00 0.00 41.16 3.32
3097 3212 9.853555 CACAAAGCTTGACCAAATGTATATTAA 57.146 29.630 0.00 0.00 0.00 1.40
3098 3213 9.019656 ACACAAAGCTTGACCAAATGTATATTA 57.980 29.630 0.00 0.00 0.00 0.98
3099 3214 7.895759 ACACAAAGCTTGACCAAATGTATATT 58.104 30.769 0.00 0.00 0.00 1.28
3100 3215 7.466746 ACACAAAGCTTGACCAAATGTATAT 57.533 32.000 0.00 0.00 0.00 0.86
3101 3216 6.348132 CGACACAAAGCTTGACCAAATGTATA 60.348 38.462 0.00 0.00 0.00 1.47
3102 3217 5.562696 CGACACAAAGCTTGACCAAATGTAT 60.563 40.000 0.00 0.00 0.00 2.29
3103 3218 4.260990 CGACACAAAGCTTGACCAAATGTA 60.261 41.667 0.00 0.00 0.00 2.29
3104 3219 3.489059 CGACACAAAGCTTGACCAAATGT 60.489 43.478 0.00 0.00 0.00 2.71
3105 3220 3.044986 CGACACAAAGCTTGACCAAATG 58.955 45.455 0.00 0.00 0.00 2.32
3106 3221 2.687935 ACGACACAAAGCTTGACCAAAT 59.312 40.909 0.00 0.00 0.00 2.32
3107 3222 2.088423 ACGACACAAAGCTTGACCAAA 58.912 42.857 0.00 0.00 0.00 3.28
3108 3223 1.745232 ACGACACAAAGCTTGACCAA 58.255 45.000 0.00 0.00 0.00 3.67
3109 3224 1.745232 AACGACACAAAGCTTGACCA 58.255 45.000 0.00 0.00 0.00 4.02
3110 3225 2.096819 TCAAACGACACAAAGCTTGACC 59.903 45.455 0.00 0.00 0.00 4.02
3111 3226 3.098636 GTCAAACGACACAAAGCTTGAC 58.901 45.455 0.00 0.00 36.84 3.18
3112 3227 3.006940 AGTCAAACGACACAAAGCTTGA 58.993 40.909 0.00 0.00 35.75 3.02
3113 3228 3.405170 AGTCAAACGACACAAAGCTTG 57.595 42.857 0.00 0.00 35.75 4.01
3114 3229 3.438781 TGAAGTCAAACGACACAAAGCTT 59.561 39.130 0.00 0.00 35.75 3.74
3115 3230 3.006940 TGAAGTCAAACGACACAAAGCT 58.993 40.909 0.00 0.00 35.75 3.74
3116 3231 3.398954 TGAAGTCAAACGACACAAAGC 57.601 42.857 0.00 0.00 35.75 3.51
3117 3232 6.043327 TGTATGAAGTCAAACGACACAAAG 57.957 37.500 0.00 0.00 35.75 2.77
3118 3233 6.424176 TTGTATGAAGTCAAACGACACAAA 57.576 33.333 0.00 0.00 35.75 2.83
3119 3234 6.424176 TTTGTATGAAGTCAAACGACACAA 57.576 33.333 0.00 0.00 35.75 3.33
3120 3235 6.481976 AGATTTGTATGAAGTCAAACGACACA 59.518 34.615 0.00 0.00 36.58 3.72
3121 3236 6.888430 AGATTTGTATGAAGTCAAACGACAC 58.112 36.000 0.00 0.00 36.58 3.67
3122 3237 7.490962 AAGATTTGTATGAAGTCAAACGACA 57.509 32.000 0.00 0.00 36.58 4.35
3149 3264 8.076178 CCTTCGTTTCTTTTGAATTCATGTACT 58.924 33.333 9.40 0.00 38.37 2.73
3150 3265 7.326063 CCCTTCGTTTCTTTTGAATTCATGTAC 59.674 37.037 9.40 1.95 38.37 2.90
3151 3266 7.229707 TCCCTTCGTTTCTTTTGAATTCATGTA 59.770 33.333 9.40 0.00 38.37 2.29
3152 3267 6.040391 TCCCTTCGTTTCTTTTGAATTCATGT 59.960 34.615 9.40 0.00 38.37 3.21
3153 3268 6.446318 TCCCTTCGTTTCTTTTGAATTCATG 58.554 36.000 9.40 3.31 38.37 3.07
3154 3269 6.265422 ACTCCCTTCGTTTCTTTTGAATTCAT 59.735 34.615 9.40 0.00 38.37 2.57
3155 3270 5.592688 ACTCCCTTCGTTTCTTTTGAATTCA 59.407 36.000 3.38 3.38 38.37 2.57
3156 3271 6.073327 ACTCCCTTCGTTTCTTTTGAATTC 57.927 37.500 0.00 0.00 38.37 2.17
3157 3272 7.447238 TCATACTCCCTTCGTTTCTTTTGAATT 59.553 33.333 0.00 0.00 38.37 2.17
3158 3273 6.940298 TCATACTCCCTTCGTTTCTTTTGAAT 59.060 34.615 0.00 0.00 38.37 2.57
3159 3274 6.292923 TCATACTCCCTTCGTTTCTTTTGAA 58.707 36.000 0.00 0.00 36.52 2.69
3160 3275 5.860611 TCATACTCCCTTCGTTTCTTTTGA 58.139 37.500 0.00 0.00 0.00 2.69
3161 3276 5.122396 CCTCATACTCCCTTCGTTTCTTTTG 59.878 44.000 0.00 0.00 0.00 2.44
3162 3277 5.246307 CCTCATACTCCCTTCGTTTCTTTT 58.754 41.667 0.00 0.00 0.00 2.27
3163 3278 4.833390 CCTCATACTCCCTTCGTTTCTTT 58.167 43.478 0.00 0.00 0.00 2.52
3164 3279 3.369576 GCCTCATACTCCCTTCGTTTCTT 60.370 47.826 0.00 0.00 0.00 2.52
3165 3280 2.168728 GCCTCATACTCCCTTCGTTTCT 59.831 50.000 0.00 0.00 0.00 2.52
3166 3281 2.093658 TGCCTCATACTCCCTTCGTTTC 60.094 50.000 0.00 0.00 0.00 2.78
3167 3282 1.906574 TGCCTCATACTCCCTTCGTTT 59.093 47.619 0.00 0.00 0.00 3.60
3168 3283 1.568504 TGCCTCATACTCCCTTCGTT 58.431 50.000 0.00 0.00 0.00 3.85
3169 3284 1.568504 TTGCCTCATACTCCCTTCGT 58.431 50.000 0.00 0.00 0.00 3.85
3170 3285 2.918712 ATTGCCTCATACTCCCTTCG 57.081 50.000 0.00 0.00 0.00 3.79
3171 3286 4.505742 CCCTAATTGCCTCATACTCCCTTC 60.506 50.000 0.00 0.00 0.00 3.46
3172 3287 3.395941 CCCTAATTGCCTCATACTCCCTT 59.604 47.826 0.00 0.00 0.00 3.95
3173 3288 2.982488 CCCTAATTGCCTCATACTCCCT 59.018 50.000 0.00 0.00 0.00 4.20
3174 3289 2.553247 GCCCTAATTGCCTCATACTCCC 60.553 54.545 0.00 0.00 0.00 4.30
3175 3290 2.106511 TGCCCTAATTGCCTCATACTCC 59.893 50.000 0.00 0.00 0.00 3.85
3176 3291 3.492102 TGCCCTAATTGCCTCATACTC 57.508 47.619 0.00 0.00 0.00 2.59
3177 3292 3.654806 AGATGCCCTAATTGCCTCATACT 59.345 43.478 0.00 0.00 0.00 2.12
3178 3293 4.026356 AGATGCCCTAATTGCCTCATAC 57.974 45.455 0.00 0.00 0.00 2.39
3179 3294 4.104579 TGAAGATGCCCTAATTGCCTCATA 59.895 41.667 0.00 0.00 0.00 2.15
3180 3295 3.117398 TGAAGATGCCCTAATTGCCTCAT 60.117 43.478 0.00 0.00 0.00 2.90
3181 3296 2.241941 TGAAGATGCCCTAATTGCCTCA 59.758 45.455 0.00 0.00 0.00 3.86
3182 3297 2.936202 TGAAGATGCCCTAATTGCCTC 58.064 47.619 0.00 0.00 0.00 4.70
3183 3298 3.026694 GTTGAAGATGCCCTAATTGCCT 58.973 45.455 0.00 0.00 0.00 4.75
3184 3299 2.223572 CGTTGAAGATGCCCTAATTGCC 60.224 50.000 0.00 0.00 0.00 4.52
3185 3300 2.423538 ACGTTGAAGATGCCCTAATTGC 59.576 45.455 0.00 0.00 0.00 3.56
3186 3301 4.155826 TCAACGTTGAAGATGCCCTAATTG 59.844 41.667 27.94 0.00 33.55 2.32
3187 3302 4.156008 GTCAACGTTGAAGATGCCCTAATT 59.844 41.667 31.20 0.00 39.21 1.40
3188 3303 3.689649 GTCAACGTTGAAGATGCCCTAAT 59.310 43.478 31.20 0.00 39.21 1.73
3189 3304 3.071479 GTCAACGTTGAAGATGCCCTAA 58.929 45.455 31.20 3.09 39.21 2.69
3190 3305 2.301870 AGTCAACGTTGAAGATGCCCTA 59.698 45.455 31.20 3.64 39.21 3.53
3191 3306 1.072331 AGTCAACGTTGAAGATGCCCT 59.928 47.619 31.20 19.12 39.21 5.19
3192 3307 1.464997 GAGTCAACGTTGAAGATGCCC 59.535 52.381 31.20 17.23 39.21 5.36
3193 3308 1.126846 CGAGTCAACGTTGAAGATGCC 59.873 52.381 31.20 17.92 39.21 4.40
3194 3309 1.792949 ACGAGTCAACGTTGAAGATGC 59.207 47.619 31.20 18.62 44.14 3.91
3195 3310 5.570262 TTTACGAGTCAACGTTGAAGATG 57.430 39.130 31.20 21.98 44.14 2.90
3196 3311 6.780706 AATTTACGAGTCAACGTTGAAGAT 57.219 33.333 31.20 20.11 44.14 2.40
3197 3312 6.415702 CAAATTTACGAGTCAACGTTGAAGA 58.584 36.000 31.20 12.14 44.14 2.87
3198 3313 5.113529 GCAAATTTACGAGTCAACGTTGAAG 59.886 40.000 31.20 25.11 44.14 3.02
3199 3314 4.965158 GCAAATTTACGAGTCAACGTTGAA 59.035 37.500 31.20 15.25 44.14 2.69
3200 3315 4.271533 AGCAAATTTACGAGTCAACGTTGA 59.728 37.500 26.53 26.53 44.14 3.18
3201 3316 4.523813 AGCAAATTTACGAGTCAACGTTG 58.476 39.130 22.35 22.35 44.14 4.10
3202 3317 4.806342 AGCAAATTTACGAGTCAACGTT 57.194 36.364 0.00 0.00 44.14 3.99
3204 3319 4.378616 CCAAAGCAAATTTACGAGTCAACG 59.621 41.667 0.00 0.00 39.31 4.10
3205 3320 4.148174 GCCAAAGCAAATTTACGAGTCAAC 59.852 41.667 0.00 0.00 39.53 3.18
3206 3321 4.295051 GCCAAAGCAAATTTACGAGTCAA 58.705 39.130 0.00 0.00 39.53 3.18
3207 3322 3.896122 GCCAAAGCAAATTTACGAGTCA 58.104 40.909 0.00 0.00 39.53 3.41
3221 3336 1.031571 TCACGGATGGATGCCAAAGC 61.032 55.000 0.00 0.00 36.95 3.51
3222 3337 1.133025 GTTCACGGATGGATGCCAAAG 59.867 52.381 0.00 0.00 36.95 2.77
3223 3338 1.173043 GTTCACGGATGGATGCCAAA 58.827 50.000 0.00 0.00 36.95 3.28
3224 3339 0.037447 TGTTCACGGATGGATGCCAA 59.963 50.000 0.00 0.00 36.95 4.52
3225 3340 0.255604 ATGTTCACGGATGGATGCCA 59.744 50.000 0.00 0.00 38.19 4.92
3226 3341 0.664761 CATGTTCACGGATGGATGCC 59.335 55.000 0.00 0.00 0.00 4.40
3227 3342 0.664761 CCATGTTCACGGATGGATGC 59.335 55.000 0.00 0.00 41.63 3.91
3228 3343 1.311859 CCCATGTTCACGGATGGATG 58.688 55.000 0.00 0.00 41.63 3.51
3229 3344 0.183492 CCCCATGTTCACGGATGGAT 59.817 55.000 0.00 0.00 41.63 3.41
3230 3345 1.607071 CCCCATGTTCACGGATGGA 59.393 57.895 0.00 0.00 41.63 3.41
3231 3346 1.453745 CCCCCATGTTCACGGATGG 60.454 63.158 0.00 0.00 39.18 3.51
3232 3347 0.183492 ATCCCCCATGTTCACGGATG 59.817 55.000 0.00 0.00 32.05 3.51
3233 3348 0.474184 GATCCCCCATGTTCACGGAT 59.526 55.000 0.00 0.00 36.02 4.18
3234 3349 0.912006 TGATCCCCCATGTTCACGGA 60.912 55.000 0.00 0.00 0.00 4.69
3235 3350 0.034574 TTGATCCCCCATGTTCACGG 60.035 55.000 0.00 0.00 0.00 4.94
3236 3351 1.949525 GATTGATCCCCCATGTTCACG 59.050 52.381 0.00 0.00 0.00 4.35
3237 3352 2.310538 GGATTGATCCCCCATGTTCAC 58.689 52.381 0.00 0.00 41.20 3.18
3238 3353 2.754012 GGATTGATCCCCCATGTTCA 57.246 50.000 0.00 0.00 41.20 3.18
3248 3363 2.304180 ATCCATGTCCGAGGATTGATCC 59.696 50.000 1.63 1.63 41.80 3.36
3249 3364 3.332919 CATCCATGTCCGAGGATTGATC 58.667 50.000 0.00 0.00 41.80 2.92
3250 3365 2.551721 GCATCCATGTCCGAGGATTGAT 60.552 50.000 0.00 0.00 41.80 2.57
3251 3366 1.202687 GCATCCATGTCCGAGGATTGA 60.203 52.381 0.00 0.00 41.80 2.57
3252 3367 1.233019 GCATCCATGTCCGAGGATTG 58.767 55.000 0.00 0.00 41.80 2.67
3253 3368 0.109342 GGCATCCATGTCCGAGGATT 59.891 55.000 0.00 0.00 41.80 3.01
3254 3369 1.757306 GGCATCCATGTCCGAGGAT 59.243 57.895 0.00 0.00 45.30 3.24
3255 3370 2.796193 CGGCATCCATGTCCGAGGA 61.796 63.158 13.82 0.00 44.46 3.71
3256 3371 2.280389 CGGCATCCATGTCCGAGG 60.280 66.667 13.82 0.00 44.46 4.63
3257 3372 2.280389 CCGGCATCCATGTCCGAG 60.280 66.667 18.29 8.94 44.46 4.63
3258 3373 2.762043 TCCGGCATCCATGTCCGA 60.762 61.111 18.29 1.95 44.46 4.55
3259 3374 2.280389 CTCCGGCATCCATGTCCG 60.280 66.667 0.00 12.68 42.75 4.79
3260 3375 2.592861 GCTCCGGCATCCATGTCC 60.593 66.667 0.00 0.00 38.54 4.02
3261 3376 2.592861 GGCTCCGGCATCCATGTC 60.593 66.667 0.00 0.00 40.87 3.06
3262 3377 4.552365 CGGCTCCGGCATCCATGT 62.552 66.667 0.00 0.00 40.87 3.21
3275 3390 3.860930 AATGTTTGGACGGCCGGCT 62.861 57.895 33.64 10.23 36.79 5.52
3276 3391 2.428960 AAAATGTTTGGACGGCCGGC 62.429 55.000 31.76 29.65 36.79 6.13
3277 3392 0.032815 AAAAATGTTTGGACGGCCGG 59.967 50.000 31.76 11.88 36.79 6.13
3278 3393 1.414378 GAAAAATGTTTGGACGGCCG 58.586 50.000 26.86 26.86 36.79 6.13
3279 3394 1.790755 GGAAAAATGTTTGGACGGCC 58.209 50.000 0.00 0.00 0.00 6.13
3280 3395 1.001158 TCGGAAAAATGTTTGGACGGC 60.001 47.619 0.00 0.00 0.00 5.68
3281 3396 2.033550 TGTCGGAAAAATGTTTGGACGG 59.966 45.455 0.00 0.00 32.93 4.79
3282 3397 3.341857 TGTCGGAAAAATGTTTGGACG 57.658 42.857 0.00 0.00 32.93 4.79
3283 3398 4.026062 GCTTTGTCGGAAAAATGTTTGGAC 60.026 41.667 0.00 0.00 31.79 4.02
3284 3399 4.116238 GCTTTGTCGGAAAAATGTTTGGA 58.884 39.130 0.00 0.00 0.00 3.53
3285 3400 3.868077 TGCTTTGTCGGAAAAATGTTTGG 59.132 39.130 0.00 0.00 0.00 3.28
3286 3401 4.803088 TCTGCTTTGTCGGAAAAATGTTTG 59.197 37.500 0.00 0.00 0.00 2.93
3287 3402 4.803613 GTCTGCTTTGTCGGAAAAATGTTT 59.196 37.500 0.00 0.00 0.00 2.83
3288 3403 4.142271 TGTCTGCTTTGTCGGAAAAATGTT 60.142 37.500 0.00 0.00 0.00 2.71
3289 3404 3.380004 TGTCTGCTTTGTCGGAAAAATGT 59.620 39.130 0.00 0.00 0.00 2.71
3290 3405 3.963665 TGTCTGCTTTGTCGGAAAAATG 58.036 40.909 0.00 0.00 0.00 2.32
3291 3406 4.647424 TTGTCTGCTTTGTCGGAAAAAT 57.353 36.364 0.00 0.00 0.00 1.82
3292 3407 4.442375 TTTGTCTGCTTTGTCGGAAAAA 57.558 36.364 0.00 0.00 0.00 1.94
3293 3408 4.647424 ATTTGTCTGCTTTGTCGGAAAA 57.353 36.364 0.00 0.00 0.00 2.29
3294 3409 4.097135 TGAATTTGTCTGCTTTGTCGGAAA 59.903 37.500 0.00 0.00 0.00 3.13
3295 3410 3.629855 TGAATTTGTCTGCTTTGTCGGAA 59.370 39.130 0.00 0.00 0.00 4.30
3296 3411 3.210227 TGAATTTGTCTGCTTTGTCGGA 58.790 40.909 0.00 0.00 0.00 4.55
3297 3412 3.624326 TGAATTTGTCTGCTTTGTCGG 57.376 42.857 0.00 0.00 0.00 4.79
3298 3413 4.786507 TCATGAATTTGTCTGCTTTGTCG 58.213 39.130 0.00 0.00 0.00 4.35
3299 3414 7.010367 TGTTTTCATGAATTTGTCTGCTTTGTC 59.990 33.333 9.40 0.00 0.00 3.18
3300 3415 6.817641 TGTTTTCATGAATTTGTCTGCTTTGT 59.182 30.769 9.40 0.00 0.00 2.83
3301 3416 7.121272 GTGTTTTCATGAATTTGTCTGCTTTG 58.879 34.615 9.40 0.00 0.00 2.77
3302 3417 6.817641 TGTGTTTTCATGAATTTGTCTGCTTT 59.182 30.769 9.40 0.00 0.00 3.51
3303 3418 6.339730 TGTGTTTTCATGAATTTGTCTGCTT 58.660 32.000 9.40 0.00 0.00 3.91
3304 3419 5.904941 TGTGTTTTCATGAATTTGTCTGCT 58.095 33.333 9.40 0.00 0.00 4.24
3305 3420 6.413269 GTTGTGTTTTCATGAATTTGTCTGC 58.587 36.000 9.40 0.00 0.00 4.26
3306 3421 6.291743 CCGTTGTGTTTTCATGAATTTGTCTG 60.292 38.462 9.40 0.00 0.00 3.51
3307 3422 5.748152 CCGTTGTGTTTTCATGAATTTGTCT 59.252 36.000 9.40 0.00 0.00 3.41
3308 3423 5.746245 TCCGTTGTGTTTTCATGAATTTGTC 59.254 36.000 9.40 0.69 0.00 3.18
3309 3424 5.655488 TCCGTTGTGTTTTCATGAATTTGT 58.345 33.333 9.40 0.00 0.00 2.83
3310 3425 6.768029 ATCCGTTGTGTTTTCATGAATTTG 57.232 33.333 9.40 0.00 0.00 2.32
3311 3426 7.493971 TGAAATCCGTTGTGTTTTCATGAATTT 59.506 29.630 9.40 2.08 34.20 1.82
3312 3427 6.983307 TGAAATCCGTTGTGTTTTCATGAATT 59.017 30.769 9.40 0.00 34.20 2.17
3313 3428 6.511416 TGAAATCCGTTGTGTTTTCATGAAT 58.489 32.000 9.40 0.00 34.20 2.57
3314 3429 5.895928 TGAAATCCGTTGTGTTTTCATGAA 58.104 33.333 3.38 3.38 34.20 2.57
3315 3430 5.506686 TGAAATCCGTTGTGTTTTCATGA 57.493 34.783 0.00 0.00 34.20 3.07
3316 3431 6.860539 TGTATGAAATCCGTTGTGTTTTCATG 59.139 34.615 16.07 0.00 44.34 3.07
3317 3432 6.976088 TGTATGAAATCCGTTGTGTTTTCAT 58.024 32.000 12.65 12.65 45.67 2.57
3318 3433 6.378710 TGTATGAAATCCGTTGTGTTTTCA 57.621 33.333 0.00 0.00 40.99 2.69
3319 3434 7.434013 AGTTTGTATGAAATCCGTTGTGTTTTC 59.566 33.333 0.00 0.00 0.00 2.29
3320 3435 7.221838 CAGTTTGTATGAAATCCGTTGTGTTTT 59.778 33.333 0.00 0.00 0.00 2.43
3321 3436 6.695278 CAGTTTGTATGAAATCCGTTGTGTTT 59.305 34.615 0.00 0.00 0.00 2.83
3322 3437 6.205784 CAGTTTGTATGAAATCCGTTGTGTT 58.794 36.000 0.00 0.00 0.00 3.32
3323 3438 5.278266 CCAGTTTGTATGAAATCCGTTGTGT 60.278 40.000 0.00 0.00 0.00 3.72
3324 3439 5.049060 TCCAGTTTGTATGAAATCCGTTGTG 60.049 40.000 0.00 0.00 0.00 3.33
3325 3440 5.067273 TCCAGTTTGTATGAAATCCGTTGT 58.933 37.500 0.00 0.00 0.00 3.32
3326 3441 5.621197 TCCAGTTTGTATGAAATCCGTTG 57.379 39.130 0.00 0.00 0.00 4.10
3327 3442 5.943416 TCATCCAGTTTGTATGAAATCCGTT 59.057 36.000 0.00 0.00 0.00 4.44
3328 3443 5.496556 TCATCCAGTTTGTATGAAATCCGT 58.503 37.500 0.00 0.00 0.00 4.69
3329 3444 6.435430 TTCATCCAGTTTGTATGAAATCCG 57.565 37.500 0.00 0.00 36.85 4.18
3330 3445 6.753744 GCTTTCATCCAGTTTGTATGAAATCC 59.246 38.462 9.31 2.94 44.35 3.01
3331 3446 7.315142 TGCTTTCATCCAGTTTGTATGAAATC 58.685 34.615 9.31 6.98 44.35 2.17
3332 3447 7.230849 TGCTTTCATCCAGTTTGTATGAAAT 57.769 32.000 9.31 0.00 44.35 2.17
3333 3448 6.647334 TGCTTTCATCCAGTTTGTATGAAA 57.353 33.333 8.75 8.75 43.65 2.69
3334 3449 6.839124 ATGCTTTCATCCAGTTTGTATGAA 57.161 33.333 0.00 0.00 37.73 2.57
3335 3450 6.839124 AATGCTTTCATCCAGTTTGTATGA 57.161 33.333 0.00 0.00 31.27 2.15
3336 3451 8.028354 TGTAAATGCTTTCATCCAGTTTGTATG 58.972 33.333 0.00 0.00 31.27 2.39
3337 3452 8.121305 TGTAAATGCTTTCATCCAGTTTGTAT 57.879 30.769 0.00 0.00 31.27 2.29
3338 3453 7.517614 TGTAAATGCTTTCATCCAGTTTGTA 57.482 32.000 0.00 0.00 31.27 2.41
3339 3454 6.403866 TGTAAATGCTTTCATCCAGTTTGT 57.596 33.333 0.00 0.00 31.27 2.83
3340 3455 7.894376 AATGTAAATGCTTTCATCCAGTTTG 57.106 32.000 0.00 0.00 31.27 2.93
3341 3456 8.776470 CAAAATGTAAATGCTTTCATCCAGTTT 58.224 29.630 0.00 0.00 30.48 2.66
3342 3457 7.388500 CCAAAATGTAAATGCTTTCATCCAGTT 59.612 33.333 0.00 0.00 31.27 3.16
3343 3458 6.875195 CCAAAATGTAAATGCTTTCATCCAGT 59.125 34.615 0.00 0.00 31.27 4.00
3344 3459 7.063780 GTCCAAAATGTAAATGCTTTCATCCAG 59.936 37.037 0.00 0.00 31.27 3.86
3345 3460 6.873076 GTCCAAAATGTAAATGCTTTCATCCA 59.127 34.615 0.00 0.00 31.27 3.41
3346 3461 6.873076 TGTCCAAAATGTAAATGCTTTCATCC 59.127 34.615 0.00 0.00 31.27 3.51
3347 3462 7.887996 TGTCCAAAATGTAAATGCTTTCATC 57.112 32.000 0.00 0.00 31.27 2.92
3348 3463 8.316214 AGATGTCCAAAATGTAAATGCTTTCAT 58.684 29.630 0.00 0.00 33.53 2.57
3349 3464 7.669427 AGATGTCCAAAATGTAAATGCTTTCA 58.331 30.769 0.00 0.00 0.00 2.69
3350 3465 8.538409 AAGATGTCCAAAATGTAAATGCTTTC 57.462 30.769 0.00 0.00 0.00 2.62
3351 3466 8.907222 AAAGATGTCCAAAATGTAAATGCTTT 57.093 26.923 0.00 0.00 0.00 3.51
3352 3467 8.907222 AAAAGATGTCCAAAATGTAAATGCTT 57.093 26.923 0.00 0.00 0.00 3.91
3353 3468 9.423061 GTAAAAGATGTCCAAAATGTAAATGCT 57.577 29.630 0.00 0.00 0.00 3.79
3354 3469 8.655970 GGTAAAAGATGTCCAAAATGTAAATGC 58.344 33.333 0.00 0.00 0.00 3.56
3355 3470 9.927668 AGGTAAAAGATGTCCAAAATGTAAATG 57.072 29.630 0.00 0.00 0.00 2.32
3360 3475 8.585018 CCTTTAGGTAAAAGATGTCCAAAATGT 58.415 33.333 0.00 0.00 46.44 2.71
3361 3476 8.986477 CCTTTAGGTAAAAGATGTCCAAAATG 57.014 34.615 0.00 0.00 46.44 2.32
3379 3494 5.944007 AGGTGCACATAGTTTAACCTTTAGG 59.056 40.000 20.43 0.00 34.36 2.69
3380 3495 6.093633 GGAGGTGCACATAGTTTAACCTTTAG 59.906 42.308 20.43 0.00 38.14 1.85
3381 3496 5.941647 GGAGGTGCACATAGTTTAACCTTTA 59.058 40.000 20.43 0.00 38.14 1.85
3382 3497 4.765339 GGAGGTGCACATAGTTTAACCTTT 59.235 41.667 20.43 0.00 38.14 3.11
3383 3498 4.332828 GGAGGTGCACATAGTTTAACCTT 58.667 43.478 20.43 0.00 38.14 3.50
3384 3499 3.618997 CGGAGGTGCACATAGTTTAACCT 60.619 47.826 20.43 1.43 40.69 3.50
3385 3500 2.676342 CGGAGGTGCACATAGTTTAACC 59.324 50.000 20.43 6.11 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.