Multiple sequence alignment - TraesCS7A01G244200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G244200 chr7A 100.000 2532 0 0 1 2532 221682662 221685193 0.000000e+00 4676
1 TraesCS7A01G244200 chr7A 79.482 463 92 3 1074 1534 692503747 692504208 2.430000e-85 326
2 TraesCS7A01G244200 chr7B 95.083 1078 30 7 6 1075 192770938 192769876 0.000000e+00 1676
3 TraesCS7A01G244200 chr7B 92.605 595 31 6 1531 2123 192769867 192769284 0.000000e+00 843
4 TraesCS7A01G244200 chr7B 94.568 405 14 5 2130 2532 192767242 192766844 9.950000e-174 619
5 TraesCS7A01G244200 chr7B 78.448 464 92 4 1074 1533 735918614 735919073 1.900000e-76 296
6 TraesCS7A01G244200 chr7D 93.802 1081 33 7 3 1077 208551281 208552333 0.000000e+00 1594
7 TraesCS7A01G244200 chr7D 92.375 1023 41 10 1531 2532 208552340 208553346 0.000000e+00 1423
8 TraesCS7A01G244200 chr7D 79.505 444 85 4 1074 1513 569124114 569123673 6.800000e-81 311
9 TraesCS7A01G244200 chrUn 91.558 462 36 3 1073 1532 90353113 90353573 3.550000e-178 634
10 TraesCS7A01G244200 chr1A 90.076 393 36 3 1073 1464 45104753 45104363 8.080000e-140 507
11 TraesCS7A01G244200 chr1B 92.197 346 27 0 1186 1531 65226136 65225791 8.140000e-135 490
12 TraesCS7A01G244200 chr2D 91.098 337 29 1 1073 1408 34066230 34066566 2.970000e-124 455
13 TraesCS7A01G244200 chr2D 93.333 270 18 0 1139 1408 34093346 34093615 1.410000e-107 399
14 TraesCS7A01G244200 chr2D 80.603 464 84 4 1074 1533 446847330 446847791 1.110000e-93 353
15 TraesCS7A01G244200 chr6B 77.273 462 100 5 1075 1533 718251420 718251879 1.490000e-67 267


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G244200 chr7A 221682662 221685193 2531 False 4676.0 4676 100.000000 1 2532 1 chr7A.!!$F1 2531
1 TraesCS7A01G244200 chr7B 192766844 192770938 4094 True 1046.0 1676 94.085333 6 2532 3 chr7B.!!$R1 2526
2 TraesCS7A01G244200 chr7D 208551281 208553346 2065 False 1508.5 1594 93.088500 3 2532 2 chr7D.!!$F1 2529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
554 560 2.028130 TGCACCCAGTTTTACACCAAG 58.972 47.619 0.0 0.0 0.00 3.61 F
1252 1262 0.103208 GGTAGTGGAGATGGACTGCG 59.897 60.000 0.0 0.0 39.87 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1398 1408 0.108329 AACGACCCATACAAGCGAGG 60.108 55.0 0.0 0.0 0.00 4.63 R
2153 4200 0.179073 CTCCACTCGTGCTTATGGGG 60.179 60.0 0.0 0.0 32.73 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 161 2.462456 ATGCACTGTACCAGTCTGTG 57.538 50.000 0.00 0.00 43.43 3.66
257 258 5.064198 TGTTACAACACAGTCACTAAGCAAC 59.936 40.000 0.00 0.00 33.17 4.17
370 371 8.940952 AGTTAAATATCTGCTTGTCAAGAAGTC 58.059 33.333 18.50 1.26 35.52 3.01
408 409 9.025041 TCATGAAGAGTATAACACAAAGAGAGA 57.975 33.333 0.00 0.00 0.00 3.10
411 412 8.082852 TGAAGAGTATAACACAAAGAGAGACAC 58.917 37.037 0.00 0.00 0.00 3.67
516 522 7.905604 TGCATCACTGGTATATTAGCATAAC 57.094 36.000 0.00 0.00 35.39 1.89
524 530 7.657761 ACTGGTATATTAGCATAACTGAAGCAC 59.342 37.037 0.00 0.00 35.39 4.40
554 560 2.028130 TGCACCCAGTTTTACACCAAG 58.972 47.619 0.00 0.00 0.00 3.61
665 671 5.501156 GAAGTACCCATTCAACCTGAGAAT 58.499 41.667 0.00 0.00 36.19 2.40
687 694 8.445588 AGAATAGAAAGGAAAAGGTAAACTCCA 58.554 33.333 0.00 0.00 0.00 3.86
796 805 4.769688 CACATAGGCTTACAACTCCATGA 58.230 43.478 0.00 0.00 0.00 3.07
952 962 5.659463 TGAAAATTTGTTAGCTGCAACTGT 58.341 33.333 1.02 0.00 0.00 3.55
993 1003 8.564574 TGTTTAAATGTGAATGAGTGTAAGTCC 58.435 33.333 0.00 0.00 34.62 3.85
1077 1087 4.680702 CATGTACAGAGAGACACAGATGG 58.319 47.826 0.33 0.00 0.00 3.51
1079 1089 1.637338 ACAGAGAGACACAGATGGCA 58.363 50.000 0.00 0.00 35.60 4.92
1080 1090 1.549620 ACAGAGAGACACAGATGGCAG 59.450 52.381 0.00 0.00 35.60 4.85
1081 1091 1.134759 CAGAGAGACACAGATGGCAGG 60.135 57.143 0.00 0.00 35.60 4.85
1082 1092 0.461693 GAGAGACACAGATGGCAGGC 60.462 60.000 0.00 0.00 35.60 4.85
1083 1093 0.908656 AGAGACACAGATGGCAGGCT 60.909 55.000 0.00 0.00 35.60 4.58
1084 1094 0.743701 GAGACACAGATGGCAGGCTG 60.744 60.000 10.94 10.94 35.60 4.85
1085 1095 1.748122 GACACAGATGGCAGGCTGG 60.748 63.158 17.64 13.05 36.47 4.85
1086 1096 2.189191 GACACAGATGGCAGGCTGGA 62.189 60.000 17.64 0.00 36.47 3.86
1087 1097 1.451567 CACAGATGGCAGGCTGGAG 60.452 63.158 17.64 11.01 36.47 3.86
1088 1098 2.516460 CAGATGGCAGGCTGGAGC 60.516 66.667 17.64 0.97 41.14 4.70
1098 1108 4.796314 GCTGGAGCCAGGATGATC 57.204 61.111 17.64 0.00 43.77 2.92
1099 1109 1.072852 GCTGGAGCCAGGATGATCC 59.927 63.158 17.64 2.46 43.77 3.36
1115 1125 3.732212 TGATCCTGCGTGATCATAAAGG 58.268 45.455 12.48 6.44 44.65 3.11
1116 1126 3.134623 TGATCCTGCGTGATCATAAAGGT 59.865 43.478 12.48 7.45 44.65 3.50
1117 1127 4.343814 TGATCCTGCGTGATCATAAAGGTA 59.656 41.667 12.48 7.37 44.65 3.08
1118 1128 4.054780 TCCTGCGTGATCATAAAGGTAC 57.945 45.455 15.98 0.00 0.00 3.34
1119 1129 2.794910 CCTGCGTGATCATAAAGGTACG 59.205 50.000 0.00 0.00 34.93 3.67
1120 1130 2.794910 CTGCGTGATCATAAAGGTACGG 59.205 50.000 0.00 0.00 32.69 4.02
1121 1131 2.166870 TGCGTGATCATAAAGGTACGGT 59.833 45.455 0.00 0.00 32.69 4.83
1122 1132 2.793232 GCGTGATCATAAAGGTACGGTC 59.207 50.000 0.00 0.00 32.69 4.79
1123 1133 3.735820 GCGTGATCATAAAGGTACGGTCA 60.736 47.826 0.00 0.00 32.69 4.02
1124 1134 4.617959 CGTGATCATAAAGGTACGGTCAT 58.382 43.478 0.00 0.00 0.00 3.06
1125 1135 4.680110 CGTGATCATAAAGGTACGGTCATC 59.320 45.833 0.00 0.00 0.00 2.92
1126 1136 5.507482 CGTGATCATAAAGGTACGGTCATCT 60.507 44.000 0.00 0.00 0.00 2.90
1127 1137 6.281405 GTGATCATAAAGGTACGGTCATCTT 58.719 40.000 0.00 0.00 0.00 2.40
1128 1138 6.761714 GTGATCATAAAGGTACGGTCATCTTT 59.238 38.462 0.00 7.88 34.37 2.52
1129 1139 6.761242 TGATCATAAAGGTACGGTCATCTTTG 59.239 38.462 0.00 1.14 32.53 2.77
1130 1140 4.873827 TCATAAAGGTACGGTCATCTTTGC 59.126 41.667 11.14 0.00 32.53 3.68
1131 1141 3.418684 AAAGGTACGGTCATCTTTGCT 57.581 42.857 0.00 0.00 0.00 3.91
1132 1142 2.386661 AGGTACGGTCATCTTTGCTG 57.613 50.000 0.00 0.00 0.00 4.41
1133 1143 0.727398 GGTACGGTCATCTTTGCTGC 59.273 55.000 0.00 0.00 0.00 5.25
1134 1144 0.727398 GTACGGTCATCTTTGCTGCC 59.273 55.000 0.00 0.00 0.00 4.85
1135 1145 0.323302 TACGGTCATCTTTGCTGCCA 59.677 50.000 0.00 0.00 0.00 4.92
1136 1146 0.322816 ACGGTCATCTTTGCTGCCAT 60.323 50.000 0.00 0.00 0.00 4.40
1137 1147 1.065491 ACGGTCATCTTTGCTGCCATA 60.065 47.619 0.00 0.00 0.00 2.74
1138 1148 1.331756 CGGTCATCTTTGCTGCCATAC 59.668 52.381 0.00 0.00 0.00 2.39
1139 1149 1.331756 GGTCATCTTTGCTGCCATACG 59.668 52.381 0.00 0.00 0.00 3.06
1140 1150 1.016627 TCATCTTTGCTGCCATACGC 58.983 50.000 0.00 0.00 38.31 4.42
1152 1162 3.827625 TGCCATACGCATGTTGTTTAAC 58.172 40.909 0.00 0.00 44.64 2.01
1153 1163 3.504134 TGCCATACGCATGTTGTTTAACT 59.496 39.130 0.00 0.00 44.64 2.24
1154 1164 3.851403 GCCATACGCATGTTGTTTAACTG 59.149 43.478 0.00 0.00 36.14 3.16
1155 1165 4.614993 GCCATACGCATGTTGTTTAACTGT 60.615 41.667 0.00 0.00 36.14 3.55
1156 1166 4.851014 CCATACGCATGTTGTTTAACTGTG 59.149 41.667 0.00 0.00 37.68 3.66
1157 1167 5.448438 CATACGCATGTTGTTTAACTGTGT 58.552 37.500 6.53 6.53 39.55 3.72
1158 1168 4.364415 ACGCATGTTGTTTAACTGTGTT 57.636 36.364 0.00 0.00 36.34 3.32
1159 1169 4.101942 ACGCATGTTGTTTAACTGTGTTG 58.898 39.130 0.00 0.00 36.34 3.33
1160 1170 4.142578 ACGCATGTTGTTTAACTGTGTTGA 60.143 37.500 0.00 0.00 36.34 3.18
1161 1171 4.975502 CGCATGTTGTTTAACTGTGTTGAT 59.024 37.500 0.00 0.00 37.68 2.57
1162 1172 5.108292 CGCATGTTGTTTAACTGTGTTGATG 60.108 40.000 0.00 0.00 37.68 3.07
1163 1173 5.332506 GCATGTTGTTTAACTGTGTTGATGC 60.333 40.000 0.00 0.00 37.68 3.91
1164 1174 4.677584 TGTTGTTTAACTGTGTTGATGCC 58.322 39.130 0.00 0.00 37.68 4.40
1165 1175 4.048504 GTTGTTTAACTGTGTTGATGCCC 58.951 43.478 0.00 0.00 33.94 5.36
1166 1176 3.561143 TGTTTAACTGTGTTGATGCCCT 58.439 40.909 0.00 0.00 0.00 5.19
1167 1177 3.317711 TGTTTAACTGTGTTGATGCCCTG 59.682 43.478 0.00 0.00 0.00 4.45
1168 1178 2.198827 TAACTGTGTTGATGCCCTGG 57.801 50.000 0.00 0.00 0.00 4.45
1169 1179 0.478072 AACTGTGTTGATGCCCTGGA 59.522 50.000 0.00 0.00 0.00 3.86
1170 1180 0.478072 ACTGTGTTGATGCCCTGGAA 59.522 50.000 0.00 0.00 0.00 3.53
1171 1181 1.171308 CTGTGTTGATGCCCTGGAAG 58.829 55.000 0.00 0.00 0.00 3.46
1172 1182 0.895100 TGTGTTGATGCCCTGGAAGC 60.895 55.000 0.00 0.00 0.00 3.86
1173 1183 1.675310 TGTTGATGCCCTGGAAGCG 60.675 57.895 0.00 0.00 0.00 4.68
1174 1184 2.045045 TTGATGCCCTGGAAGCGG 60.045 61.111 0.00 0.00 0.00 5.52
1175 1185 2.601702 TTGATGCCCTGGAAGCGGA 61.602 57.895 0.00 0.00 0.00 5.54
1176 1186 2.203126 GATGCCCTGGAAGCGGAG 60.203 66.667 0.00 0.00 0.00 4.63
1177 1187 3.764160 GATGCCCTGGAAGCGGAGG 62.764 68.421 0.00 0.00 0.00 4.30
1191 1201 4.615815 GAGGCGGCAGCGATGGAT 62.616 66.667 13.08 0.00 46.35 3.41
1192 1202 4.923942 AGGCGGCAGCGATGGATG 62.924 66.667 13.08 0.00 46.35 3.51
1193 1203 4.916293 GGCGGCAGCGATGGATGA 62.916 66.667 3.07 0.00 46.35 2.92
1194 1204 2.896854 GCGGCAGCGATGGATGAA 60.897 61.111 1.46 0.00 0.00 2.57
1195 1205 2.890109 GCGGCAGCGATGGATGAAG 61.890 63.158 1.46 0.00 0.00 3.02
1196 1206 2.249535 CGGCAGCGATGGATGAAGG 61.250 63.158 1.46 0.00 0.00 3.46
1197 1207 1.895707 GGCAGCGATGGATGAAGGG 60.896 63.158 1.46 0.00 0.00 3.95
1198 1208 2.550101 GCAGCGATGGATGAAGGGC 61.550 63.158 1.46 0.00 0.00 5.19
1199 1209 1.147824 CAGCGATGGATGAAGGGCT 59.852 57.895 0.00 0.00 0.00 5.19
1200 1210 0.883814 CAGCGATGGATGAAGGGCTC 60.884 60.000 0.00 0.00 0.00 4.70
1201 1211 1.599240 GCGATGGATGAAGGGCTCC 60.599 63.158 0.00 0.00 0.00 4.70
1202 1212 1.301244 CGATGGATGAAGGGCTCCG 60.301 63.158 0.00 0.00 34.05 4.63
1203 1213 1.072159 GATGGATGAAGGGCTCCGG 59.928 63.158 0.00 0.00 34.05 5.14
1204 1214 3.125376 ATGGATGAAGGGCTCCGGC 62.125 63.158 0.00 0.00 34.05 6.13
1205 1215 3.483869 GGATGAAGGGCTCCGGCT 61.484 66.667 0.00 0.00 38.73 5.52
1206 1216 2.592308 GATGAAGGGCTCCGGCTT 59.408 61.111 0.00 0.00 38.73 4.35
1207 1217 1.821332 GATGAAGGGCTCCGGCTTG 60.821 63.158 0.00 0.00 38.73 4.01
1208 1218 4.722700 TGAAGGGCTCCGGCTTGC 62.723 66.667 0.00 0.12 38.73 4.01
1209 1219 4.416738 GAAGGGCTCCGGCTTGCT 62.417 66.667 0.00 0.00 38.73 3.91
1210 1220 4.416738 AAGGGCTCCGGCTTGCTC 62.417 66.667 0.00 0.22 38.73 4.26
1212 1222 4.847444 GGGCTCCGGCTTGCTCTC 62.847 72.222 0.00 0.00 38.73 3.20
1213 1223 4.847444 GGCTCCGGCTTGCTCTCC 62.847 72.222 0.00 0.00 38.73 3.71
1214 1224 4.087892 GCTCCGGCTTGCTCTCCA 62.088 66.667 0.00 0.00 35.22 3.86
1215 1225 2.125350 CTCCGGCTTGCTCTCCAC 60.125 66.667 0.00 0.00 0.00 4.02
1216 1226 2.604686 TCCGGCTTGCTCTCCACT 60.605 61.111 0.00 0.00 0.00 4.00
1217 1227 2.435586 CCGGCTTGCTCTCCACTG 60.436 66.667 0.00 0.00 0.00 3.66
1218 1228 2.435586 CGGCTTGCTCTCCACTGG 60.436 66.667 0.00 0.00 0.00 4.00
1219 1229 2.947532 CGGCTTGCTCTCCACTGGA 61.948 63.158 0.00 0.00 0.00 3.86
1220 1230 1.376553 GGCTTGCTCTCCACTGGAC 60.377 63.158 0.00 0.00 0.00 4.02
1221 1231 1.372683 GCTTGCTCTCCACTGGACA 59.627 57.895 0.00 0.00 0.00 4.02
1222 1232 0.250467 GCTTGCTCTCCACTGGACAA 60.250 55.000 0.00 0.00 0.00 3.18
1223 1233 1.815408 GCTTGCTCTCCACTGGACAAA 60.815 52.381 0.00 0.00 0.00 2.83
1224 1234 1.876156 CTTGCTCTCCACTGGACAAAC 59.124 52.381 0.00 0.00 0.00 2.93
1225 1235 1.131638 TGCTCTCCACTGGACAAACT 58.868 50.000 0.00 0.00 0.00 2.66
1226 1236 1.070758 TGCTCTCCACTGGACAAACTC 59.929 52.381 0.00 0.00 0.00 3.01
1227 1237 1.070758 GCTCTCCACTGGACAAACTCA 59.929 52.381 0.00 0.00 0.00 3.41
1228 1238 2.760374 CTCTCCACTGGACAAACTCAC 58.240 52.381 0.00 0.00 0.00 3.51
1229 1239 1.416401 TCTCCACTGGACAAACTCACC 59.584 52.381 0.00 0.00 0.00 4.02
1230 1240 1.417890 CTCCACTGGACAAACTCACCT 59.582 52.381 0.00 0.00 0.00 4.00
1231 1241 1.416401 TCCACTGGACAAACTCACCTC 59.584 52.381 0.00 0.00 0.00 3.85
1232 1242 1.417890 CCACTGGACAAACTCACCTCT 59.582 52.381 0.00 0.00 0.00 3.69
1233 1243 2.487934 CACTGGACAAACTCACCTCTG 58.512 52.381 0.00 0.00 0.00 3.35
1234 1244 1.417890 ACTGGACAAACTCACCTCTGG 59.582 52.381 0.00 0.00 0.00 3.86
1235 1245 1.417890 CTGGACAAACTCACCTCTGGT 59.582 52.381 0.00 0.00 35.62 4.00
1236 1246 2.632996 CTGGACAAACTCACCTCTGGTA 59.367 50.000 0.00 0.00 32.11 3.25
1237 1247 2.632996 TGGACAAACTCACCTCTGGTAG 59.367 50.000 0.00 0.00 32.11 3.18
1238 1248 2.633481 GGACAAACTCACCTCTGGTAGT 59.367 50.000 0.00 0.00 32.11 2.73
1239 1249 3.555168 GGACAAACTCACCTCTGGTAGTG 60.555 52.174 0.00 0.00 32.11 2.74
1240 1250 2.368875 ACAAACTCACCTCTGGTAGTGG 59.631 50.000 0.00 0.00 32.11 4.00
1241 1251 2.632996 CAAACTCACCTCTGGTAGTGGA 59.367 50.000 4.12 0.00 32.11 4.02
1242 1252 2.223803 ACTCACCTCTGGTAGTGGAG 57.776 55.000 4.12 0.00 32.11 3.86
1243 1253 1.711375 ACTCACCTCTGGTAGTGGAGA 59.289 52.381 8.25 1.32 32.11 3.71
1244 1254 2.313342 ACTCACCTCTGGTAGTGGAGAT 59.687 50.000 8.25 0.00 32.11 2.75
1245 1255 2.692557 CTCACCTCTGGTAGTGGAGATG 59.307 54.545 4.12 0.00 32.11 2.90
1246 1256 1.759445 CACCTCTGGTAGTGGAGATGG 59.241 57.143 4.12 0.00 32.11 3.51
1247 1257 1.646447 ACCTCTGGTAGTGGAGATGGA 59.354 52.381 4.12 0.00 32.11 3.41
1248 1258 2.035632 CCTCTGGTAGTGGAGATGGAC 58.964 57.143 0.00 0.00 30.66 4.02
1249 1259 2.358721 CCTCTGGTAGTGGAGATGGACT 60.359 54.545 0.00 0.00 30.66 3.85
1250 1260 2.692557 CTCTGGTAGTGGAGATGGACTG 59.307 54.545 0.00 0.00 0.00 3.51
1251 1261 1.137872 CTGGTAGTGGAGATGGACTGC 59.862 57.143 0.00 0.00 37.47 4.40
1252 1262 0.103208 GGTAGTGGAGATGGACTGCG 59.897 60.000 0.00 0.00 39.87 5.18
1253 1263 0.528684 GTAGTGGAGATGGACTGCGC 60.529 60.000 0.00 0.00 45.52 6.09
1254 1264 2.581354 GTGGAGATGGACTGCGCT 59.419 61.111 9.73 0.00 42.68 5.92
1255 1265 1.812922 GTGGAGATGGACTGCGCTG 60.813 63.158 13.23 13.23 42.68 5.18
1256 1266 1.984026 TGGAGATGGACTGCGCTGA 60.984 57.895 21.92 0.00 39.87 4.26
1257 1267 1.227205 GGAGATGGACTGCGCTGAG 60.227 63.158 21.92 7.31 0.00 3.35
1258 1268 1.515020 GAGATGGACTGCGCTGAGT 59.485 57.895 21.92 11.08 0.00 3.41
1259 1269 0.108424 GAGATGGACTGCGCTGAGTT 60.108 55.000 21.92 0.00 0.00 3.01
1260 1270 0.390866 AGATGGACTGCGCTGAGTTG 60.391 55.000 21.92 0.63 0.00 3.16
1261 1271 0.671781 GATGGACTGCGCTGAGTTGT 60.672 55.000 21.92 3.97 0.00 3.32
1262 1272 0.250467 ATGGACTGCGCTGAGTTGTT 60.250 50.000 21.92 0.00 0.00 2.83
1263 1273 1.159713 TGGACTGCGCTGAGTTGTTG 61.160 55.000 21.92 0.00 0.00 3.33
1264 1274 1.082496 GACTGCGCTGAGTTGTTGC 60.082 57.895 21.92 0.00 0.00 4.17
1265 1275 1.775039 GACTGCGCTGAGTTGTTGCA 61.775 55.000 21.92 0.00 0.00 4.08
1266 1276 1.356270 CTGCGCTGAGTTGTTGCAA 59.644 52.632 9.73 0.00 34.78 4.08
1267 1277 0.248580 CTGCGCTGAGTTGTTGCAAA 60.249 50.000 9.73 0.00 34.78 3.68
1268 1278 0.385029 TGCGCTGAGTTGTTGCAAAT 59.615 45.000 9.73 0.00 31.69 2.32
1269 1279 0.780002 GCGCTGAGTTGTTGCAAATG 59.220 50.000 0.00 0.00 0.00 2.32
1270 1280 1.600164 GCGCTGAGTTGTTGCAAATGA 60.600 47.619 0.00 0.00 0.00 2.57
1271 1281 2.923605 GCGCTGAGTTGTTGCAAATGAT 60.924 45.455 0.00 0.00 0.00 2.45
1272 1282 3.311106 CGCTGAGTTGTTGCAAATGATT 58.689 40.909 0.00 0.00 0.00 2.57
1273 1283 3.362831 CGCTGAGTTGTTGCAAATGATTC 59.637 43.478 0.00 0.00 0.00 2.52
1274 1284 4.300803 GCTGAGTTGTTGCAAATGATTCA 58.699 39.130 0.00 2.04 0.00 2.57
1275 1285 4.746115 GCTGAGTTGTTGCAAATGATTCAA 59.254 37.500 0.00 0.00 0.00 2.69
1276 1286 5.407387 GCTGAGTTGTTGCAAATGATTCAAT 59.593 36.000 0.00 0.00 0.00 2.57
1277 1287 6.400727 GCTGAGTTGTTGCAAATGATTCAATC 60.401 38.462 0.00 0.00 0.00 2.67
1278 1288 6.514063 TGAGTTGTTGCAAATGATTCAATCA 58.486 32.000 1.59 1.59 44.55 2.57
1279 1289 6.985059 TGAGTTGTTGCAAATGATTCAATCAA 59.015 30.769 3.63 0.00 43.50 2.57
1280 1290 7.170151 TGAGTTGTTGCAAATGATTCAATCAAG 59.830 33.333 3.63 0.00 43.50 3.02
1281 1291 7.211573 AGTTGTTGCAAATGATTCAATCAAGA 58.788 30.769 3.63 0.00 43.50 3.02
1282 1292 7.384115 AGTTGTTGCAAATGATTCAATCAAGAG 59.616 33.333 3.63 0.00 43.50 2.85
1283 1293 6.983984 TGTTGCAAATGATTCAATCAAGAGA 58.016 32.000 3.63 0.00 43.50 3.10
1284 1294 6.864685 TGTTGCAAATGATTCAATCAAGAGAC 59.135 34.615 3.63 0.36 43.50 3.36
1285 1295 5.633927 TGCAAATGATTCAATCAAGAGACG 58.366 37.500 3.63 0.00 43.50 4.18
1286 1296 5.181811 TGCAAATGATTCAATCAAGAGACGT 59.818 36.000 3.63 0.00 43.50 4.34
1287 1297 6.088824 GCAAATGATTCAATCAAGAGACGTT 58.911 36.000 3.63 0.00 43.50 3.99
1288 1298 6.033196 GCAAATGATTCAATCAAGAGACGTTG 59.967 38.462 3.63 2.51 43.50 4.10
1289 1299 7.300320 CAAATGATTCAATCAAGAGACGTTGA 58.700 34.615 3.63 0.00 43.50 3.18
1290 1300 7.621428 AATGATTCAATCAAGAGACGTTGAT 57.379 32.000 3.63 0.00 46.94 2.57
1291 1301 8.722480 AATGATTCAATCAAGAGACGTTGATA 57.278 30.769 3.63 0.00 44.72 2.15
1292 1302 7.761651 TGATTCAATCAAGAGACGTTGATAG 57.238 36.000 0.00 0.00 44.72 2.08
1293 1303 7.547227 TGATTCAATCAAGAGACGTTGATAGA 58.453 34.615 0.00 0.00 44.72 1.98
1294 1304 8.200120 TGATTCAATCAAGAGACGTTGATAGAT 58.800 33.333 0.00 0.00 44.72 1.98
1295 1305 7.993821 TTCAATCAAGAGACGTTGATAGATC 57.006 36.000 1.07 0.00 44.72 2.75
1296 1306 7.100458 TCAATCAAGAGACGTTGATAGATCA 57.900 36.000 1.07 0.00 44.72 2.92
1297 1307 6.975197 TCAATCAAGAGACGTTGATAGATCAC 59.025 38.462 1.07 0.00 44.72 3.06
1298 1308 4.909894 TCAAGAGACGTTGATAGATCACG 58.090 43.478 0.00 0.00 36.36 4.35
1299 1309 3.972950 AGAGACGTTGATAGATCACGG 57.027 47.619 14.53 4.35 36.36 4.94
1300 1310 3.280295 AGAGACGTTGATAGATCACGGT 58.720 45.455 14.53 6.81 36.36 4.83
1301 1311 4.449131 AGAGACGTTGATAGATCACGGTA 58.551 43.478 14.53 0.00 36.36 4.02
1302 1312 4.272991 AGAGACGTTGATAGATCACGGTAC 59.727 45.833 14.53 0.00 36.36 3.34
1319 1329 4.579454 GGTACGTGCACCATATAAGAGA 57.421 45.455 12.15 0.00 38.55 3.10
1320 1330 4.547532 GGTACGTGCACCATATAAGAGAG 58.452 47.826 12.15 0.00 38.55 3.20
1321 1331 4.277672 GGTACGTGCACCATATAAGAGAGA 59.722 45.833 12.15 0.00 38.55 3.10
1322 1332 5.047943 GGTACGTGCACCATATAAGAGAGAT 60.048 44.000 12.15 0.00 38.55 2.75
1323 1333 5.127693 ACGTGCACCATATAAGAGAGATC 57.872 43.478 12.15 0.00 0.00 2.75
1324 1334 4.584743 ACGTGCACCATATAAGAGAGATCA 59.415 41.667 12.15 0.00 0.00 2.92
1325 1335 5.159925 CGTGCACCATATAAGAGAGATCAG 58.840 45.833 12.15 0.00 0.00 2.90
1326 1336 5.048434 CGTGCACCATATAAGAGAGATCAGA 60.048 44.000 12.15 0.00 0.00 3.27
1327 1337 6.515696 CGTGCACCATATAAGAGAGATCAGAA 60.516 42.308 12.15 0.00 0.00 3.02
1328 1338 6.867816 GTGCACCATATAAGAGAGATCAGAAG 59.132 42.308 5.22 0.00 0.00 2.85
1329 1339 6.014755 TGCACCATATAAGAGAGATCAGAAGG 60.015 42.308 0.00 0.00 0.00 3.46
1330 1340 6.210385 GCACCATATAAGAGAGATCAGAAGGA 59.790 42.308 0.00 0.00 0.00 3.36
1331 1341 7.093377 GCACCATATAAGAGAGATCAGAAGGAT 60.093 40.741 0.00 0.00 39.53 3.24
1332 1342 8.814931 CACCATATAAGAGAGATCAGAAGGATT 58.185 37.037 0.00 0.00 36.00 3.01
1348 1358 5.799213 GAAGGATTCTGACTCAAGAAAGGA 58.201 41.667 0.00 0.00 43.23 3.36
1349 1359 5.832539 AGGATTCTGACTCAAGAAAGGAA 57.167 39.130 0.00 0.00 39.54 3.36
1350 1360 5.555966 AGGATTCTGACTCAAGAAAGGAAC 58.444 41.667 0.00 0.00 39.54 3.62
1351 1361 5.072329 AGGATTCTGACTCAAGAAAGGAACA 59.928 40.000 0.00 0.00 39.54 3.18
1352 1362 5.942826 GGATTCTGACTCAAGAAAGGAACAT 59.057 40.000 0.00 0.00 39.54 2.71
1353 1363 6.432472 GGATTCTGACTCAAGAAAGGAACATT 59.568 38.462 0.00 0.00 39.54 2.71
1354 1364 7.607991 GGATTCTGACTCAAGAAAGGAACATTA 59.392 37.037 0.00 0.00 39.54 1.90
1355 1365 7.969536 TTCTGACTCAAGAAAGGAACATTAG 57.030 36.000 0.00 0.00 33.25 1.73
1356 1366 7.067496 TCTGACTCAAGAAAGGAACATTAGT 57.933 36.000 0.00 0.00 0.00 2.24
1357 1367 7.155328 TCTGACTCAAGAAAGGAACATTAGTC 58.845 38.462 0.00 0.00 33.20 2.59
1358 1368 7.015682 TCTGACTCAAGAAAGGAACATTAGTCT 59.984 37.037 0.00 0.00 33.64 3.24
1359 1369 8.190326 TGACTCAAGAAAGGAACATTAGTCTA 57.810 34.615 0.00 0.00 33.64 2.59
1360 1370 8.307483 TGACTCAAGAAAGGAACATTAGTCTAG 58.693 37.037 0.00 0.00 33.64 2.43
1361 1371 7.100409 ACTCAAGAAAGGAACATTAGTCTAGC 58.900 38.462 0.00 0.00 0.00 3.42
1362 1372 7.038658 ACTCAAGAAAGGAACATTAGTCTAGCT 60.039 37.037 0.00 0.00 0.00 3.32
1363 1373 8.362464 TCAAGAAAGGAACATTAGTCTAGCTA 57.638 34.615 0.00 0.00 0.00 3.32
1364 1374 8.812972 TCAAGAAAGGAACATTAGTCTAGCTAA 58.187 33.333 8.46 8.46 43.13 3.09
1365 1375 9.092876 CAAGAAAGGAACATTAGTCTAGCTAAG 57.907 37.037 10.85 7.04 42.34 2.18
1366 1376 8.596781 AGAAAGGAACATTAGTCTAGCTAAGA 57.403 34.615 10.85 0.00 42.34 2.10
1367 1377 9.207868 AGAAAGGAACATTAGTCTAGCTAAGAT 57.792 33.333 10.85 1.98 42.34 2.40
1368 1378 9.471084 GAAAGGAACATTAGTCTAGCTAAGATC 57.529 37.037 10.85 8.84 42.34 2.75
1369 1379 8.540507 AAGGAACATTAGTCTAGCTAAGATCA 57.459 34.615 10.85 0.00 42.34 2.92
1370 1380 8.177119 AGGAACATTAGTCTAGCTAAGATCAG 57.823 38.462 10.85 0.00 42.34 2.90
1371 1381 6.866248 GGAACATTAGTCTAGCTAAGATCAGC 59.134 42.308 10.85 0.00 42.34 4.26
1372 1382 6.339587 ACATTAGTCTAGCTAAGATCAGCC 57.660 41.667 10.85 0.00 42.34 4.85
1373 1383 5.048364 ACATTAGTCTAGCTAAGATCAGCCG 60.048 44.000 10.85 0.00 42.34 5.52
1374 1384 3.216187 AGTCTAGCTAAGATCAGCCGA 57.784 47.619 1.57 0.00 42.84 5.54
1375 1385 2.882137 AGTCTAGCTAAGATCAGCCGAC 59.118 50.000 13.09 13.09 42.84 4.79
1376 1386 2.619177 GTCTAGCTAAGATCAGCCGACA 59.381 50.000 14.83 0.00 42.84 4.35
1377 1387 3.254657 GTCTAGCTAAGATCAGCCGACAT 59.745 47.826 14.83 0.00 42.84 3.06
1378 1388 2.522836 AGCTAAGATCAGCCGACATG 57.477 50.000 1.57 0.00 42.84 3.21
1379 1389 0.864455 GCTAAGATCAGCCGACATGC 59.136 55.000 0.00 0.00 35.40 4.06
1380 1390 1.807755 GCTAAGATCAGCCGACATGCA 60.808 52.381 0.00 0.00 35.40 3.96
1381 1391 2.554142 CTAAGATCAGCCGACATGCAA 58.446 47.619 0.00 0.00 0.00 4.08
1382 1392 1.825090 AAGATCAGCCGACATGCAAA 58.175 45.000 0.00 0.00 0.00 3.68
1383 1393 2.048444 AGATCAGCCGACATGCAAAT 57.952 45.000 0.00 0.00 0.00 2.32
1384 1394 1.674441 AGATCAGCCGACATGCAAATG 59.326 47.619 0.00 0.00 0.00 2.32
1385 1395 1.672363 GATCAGCCGACATGCAAATGA 59.328 47.619 0.00 0.00 0.00 2.57
1386 1396 1.532523 TCAGCCGACATGCAAATGAA 58.467 45.000 0.00 0.00 0.00 2.57
1387 1397 1.469703 TCAGCCGACATGCAAATGAAG 59.530 47.619 0.00 0.00 0.00 3.02
1388 1398 0.171903 AGCCGACATGCAAATGAAGC 59.828 50.000 0.00 0.00 0.00 3.86
1389 1399 1.135699 GCCGACATGCAAATGAAGCG 61.136 55.000 0.00 0.00 33.85 4.68
1390 1400 0.447406 CCGACATGCAAATGAAGCGA 59.553 50.000 0.00 0.00 33.85 4.93
1391 1401 1.530441 CCGACATGCAAATGAAGCGAG 60.530 52.381 0.00 0.00 33.85 5.03
1392 1402 1.129251 CGACATGCAAATGAAGCGAGT 59.871 47.619 0.00 0.00 33.85 4.18
1393 1403 2.778659 GACATGCAAATGAAGCGAGTC 58.221 47.619 0.00 0.00 33.48 3.36
1394 1404 2.153645 ACATGCAAATGAAGCGAGTCA 58.846 42.857 0.00 0.00 33.85 3.41
1395 1405 2.095567 ACATGCAAATGAAGCGAGTCAC 60.096 45.455 0.00 0.00 33.85 3.67
1396 1406 1.592064 TGCAAATGAAGCGAGTCACA 58.408 45.000 0.00 0.00 33.85 3.58
1397 1407 1.264020 TGCAAATGAAGCGAGTCACAC 59.736 47.619 0.00 0.00 33.85 3.82
1398 1408 1.400242 GCAAATGAAGCGAGTCACACC 60.400 52.381 0.00 0.00 0.00 4.16
1399 1409 1.197721 CAAATGAAGCGAGTCACACCC 59.802 52.381 0.00 0.00 0.00 4.61
1400 1410 0.687354 AATGAAGCGAGTCACACCCT 59.313 50.000 0.00 0.00 0.00 4.34
1401 1411 0.247736 ATGAAGCGAGTCACACCCTC 59.752 55.000 0.00 0.00 0.00 4.30
1405 1415 2.651361 CGAGTCACACCCTCGCTT 59.349 61.111 0.00 0.00 44.42 4.68
1406 1416 1.734477 CGAGTCACACCCTCGCTTG 60.734 63.158 0.00 0.00 44.42 4.01
1407 1417 1.367840 GAGTCACACCCTCGCTTGT 59.632 57.895 0.00 0.00 0.00 3.16
1408 1418 0.601558 GAGTCACACCCTCGCTTGTA 59.398 55.000 0.00 0.00 0.00 2.41
1409 1419 1.204941 GAGTCACACCCTCGCTTGTAT 59.795 52.381 0.00 0.00 0.00 2.29
1410 1420 1.066858 AGTCACACCCTCGCTTGTATG 60.067 52.381 0.00 0.00 0.00 2.39
1411 1421 0.249120 TCACACCCTCGCTTGTATGG 59.751 55.000 0.00 0.00 0.00 2.74
1412 1422 0.744414 CACACCCTCGCTTGTATGGG 60.744 60.000 0.00 0.00 44.89 4.00
1414 1424 4.857251 CCCTCGCTTGTATGGGTC 57.143 61.111 0.00 0.00 35.13 4.46
1415 1425 1.227263 CCCTCGCTTGTATGGGTCG 60.227 63.158 0.00 0.00 35.13 4.79
1416 1426 1.515954 CCTCGCTTGTATGGGTCGT 59.484 57.895 0.00 0.00 0.00 4.34
1417 1427 0.108329 CCTCGCTTGTATGGGTCGTT 60.108 55.000 0.00 0.00 0.00 3.85
1418 1428 1.278238 CTCGCTTGTATGGGTCGTTC 58.722 55.000 0.00 0.00 0.00 3.95
1419 1429 0.457166 TCGCTTGTATGGGTCGTTCG 60.457 55.000 0.00 0.00 0.00 3.95
1420 1430 1.713830 GCTTGTATGGGTCGTTCGC 59.286 57.895 0.00 0.00 0.00 4.70
1421 1431 1.017177 GCTTGTATGGGTCGTTCGCA 61.017 55.000 3.33 3.33 42.92 5.10
1422 1432 0.999406 CTTGTATGGGTCGTTCGCAG 59.001 55.000 6.35 0.00 42.07 5.18
1423 1433 1.017177 TTGTATGGGTCGTTCGCAGC 61.017 55.000 6.35 0.00 42.07 5.25
1424 1434 1.447140 GTATGGGTCGTTCGCAGCA 60.447 57.895 0.00 0.00 42.07 4.41
1425 1435 1.153647 TATGGGTCGTTCGCAGCAG 60.154 57.895 0.00 0.00 42.07 4.24
1444 1454 3.389741 CGAACTGCATGTTGGCTTC 57.610 52.632 6.31 0.00 39.30 3.86
1445 1455 0.453282 CGAACTGCATGTTGGCTTCG 60.453 55.000 6.31 0.00 39.30 3.79
1446 1456 0.874390 GAACTGCATGTTGGCTTCGA 59.126 50.000 6.31 0.00 39.30 3.71
1447 1457 1.266718 GAACTGCATGTTGGCTTCGAA 59.733 47.619 0.00 0.00 39.30 3.71
1448 1458 1.317613 ACTGCATGTTGGCTTCGAAA 58.682 45.000 0.00 0.00 34.04 3.46
1449 1459 1.001378 ACTGCATGTTGGCTTCGAAAC 60.001 47.619 0.00 0.00 34.04 2.78
1450 1460 1.267806 CTGCATGTTGGCTTCGAAACT 59.732 47.619 0.00 0.00 34.04 2.66
1451 1461 1.680735 TGCATGTTGGCTTCGAAACTT 59.319 42.857 0.00 0.00 34.04 2.66
1452 1462 2.287547 TGCATGTTGGCTTCGAAACTTC 60.288 45.455 0.00 0.00 34.04 3.01
1453 1463 2.922335 GCATGTTGGCTTCGAAACTTCC 60.922 50.000 0.00 0.00 0.00 3.46
1454 1464 1.314730 TGTTGGCTTCGAAACTTCCC 58.685 50.000 0.00 0.00 0.00 3.97
1455 1465 1.133915 TGTTGGCTTCGAAACTTCCCT 60.134 47.619 0.00 0.00 0.00 4.20
1456 1466 1.266989 GTTGGCTTCGAAACTTCCCTG 59.733 52.381 0.00 0.00 0.00 4.45
1457 1467 0.762418 TGGCTTCGAAACTTCCCTGA 59.238 50.000 0.00 0.00 0.00 3.86
1458 1468 1.351017 TGGCTTCGAAACTTCCCTGAT 59.649 47.619 0.00 0.00 0.00 2.90
1459 1469 1.740025 GGCTTCGAAACTTCCCTGATG 59.260 52.381 0.00 0.00 0.00 3.07
1460 1470 2.615493 GGCTTCGAAACTTCCCTGATGA 60.615 50.000 0.00 0.00 0.00 2.92
1461 1471 2.675348 GCTTCGAAACTTCCCTGATGAG 59.325 50.000 0.00 0.00 0.00 2.90
1462 1472 3.617531 GCTTCGAAACTTCCCTGATGAGA 60.618 47.826 0.00 0.00 0.00 3.27
1463 1473 4.764172 CTTCGAAACTTCCCTGATGAGAT 58.236 43.478 0.00 0.00 0.00 2.75
1464 1474 5.682471 GCTTCGAAACTTCCCTGATGAGATA 60.682 44.000 0.00 0.00 0.00 1.98
1465 1475 5.521906 TCGAAACTTCCCTGATGAGATAG 57.478 43.478 0.00 0.00 0.00 2.08
1466 1476 4.054671 CGAAACTTCCCTGATGAGATAGC 58.945 47.826 0.00 0.00 0.00 2.97
1467 1477 4.202202 CGAAACTTCCCTGATGAGATAGCT 60.202 45.833 0.00 0.00 0.00 3.32
1468 1478 5.010112 CGAAACTTCCCTGATGAGATAGCTA 59.990 44.000 0.00 0.00 0.00 3.32
1469 1479 6.418057 AAACTTCCCTGATGAGATAGCTAG 57.582 41.667 0.00 0.00 0.00 3.42
1470 1480 3.831911 ACTTCCCTGATGAGATAGCTAGC 59.168 47.826 6.62 6.62 0.00 3.42
1471 1481 3.532641 TCCCTGATGAGATAGCTAGCA 57.467 47.619 18.83 3.19 0.00 3.49
1472 1482 4.058417 TCCCTGATGAGATAGCTAGCAT 57.942 45.455 18.83 8.43 0.00 3.79
1473 1483 5.198602 TCCCTGATGAGATAGCTAGCATA 57.801 43.478 18.83 6.92 0.00 3.14
1474 1484 5.199723 TCCCTGATGAGATAGCTAGCATAG 58.800 45.833 18.83 1.91 43.09 2.23
1475 1485 4.955450 CCCTGATGAGATAGCTAGCATAGT 59.045 45.833 18.83 0.00 41.93 2.12
1476 1486 5.067674 CCCTGATGAGATAGCTAGCATAGTC 59.932 48.000 18.83 8.74 41.93 2.59
1477 1487 5.651576 CCTGATGAGATAGCTAGCATAGTCA 59.348 44.000 18.83 14.15 41.93 3.41
1478 1488 6.152492 CCTGATGAGATAGCTAGCATAGTCAA 59.848 42.308 18.83 2.63 41.93 3.18
1479 1489 7.147863 CCTGATGAGATAGCTAGCATAGTCAAT 60.148 40.741 18.83 6.96 41.93 2.57
1480 1490 8.131847 TGATGAGATAGCTAGCATAGTCAATT 57.868 34.615 18.83 0.59 41.93 2.32
1481 1491 8.249638 TGATGAGATAGCTAGCATAGTCAATTC 58.750 37.037 18.83 9.88 41.93 2.17
1482 1492 7.773489 TGAGATAGCTAGCATAGTCAATTCT 57.227 36.000 18.83 5.22 41.93 2.40
1483 1493 7.600960 TGAGATAGCTAGCATAGTCAATTCTG 58.399 38.462 18.83 0.00 41.93 3.02
1484 1494 7.449704 TGAGATAGCTAGCATAGTCAATTCTGA 59.550 37.037 18.83 0.00 41.93 3.27
1485 1495 8.187913 AGATAGCTAGCATAGTCAATTCTGAA 57.812 34.615 18.83 0.00 41.93 3.02
1486 1496 8.814931 AGATAGCTAGCATAGTCAATTCTGAAT 58.185 33.333 18.83 0.00 41.93 2.57
1487 1497 8.774890 ATAGCTAGCATAGTCAATTCTGAATG 57.225 34.615 18.83 0.00 41.93 2.67
1488 1498 6.590068 AGCTAGCATAGTCAATTCTGAATGT 58.410 36.000 18.83 0.00 41.93 2.71
1489 1499 7.730084 AGCTAGCATAGTCAATTCTGAATGTA 58.270 34.615 18.83 0.00 41.93 2.29
1490 1500 8.206867 AGCTAGCATAGTCAATTCTGAATGTAA 58.793 33.333 18.83 0.00 41.93 2.41
1491 1501 8.997323 GCTAGCATAGTCAATTCTGAATGTAAT 58.003 33.333 10.63 0.00 41.93 1.89
1493 1503 8.969260 AGCATAGTCAATTCTGAATGTAATCA 57.031 30.769 3.22 0.00 31.88 2.57
1494 1504 9.570468 AGCATAGTCAATTCTGAATGTAATCAT 57.430 29.630 3.22 0.00 31.88 2.45
1495 1505 9.823098 GCATAGTCAATTCTGAATGTAATCATC 57.177 33.333 3.22 0.00 31.88 2.92
1499 1509 8.404000 AGTCAATTCTGAATGTAATCATCTTGC 58.596 33.333 3.22 0.00 31.88 4.01
1500 1510 8.404000 GTCAATTCTGAATGTAATCATCTTGCT 58.596 33.333 3.22 0.00 31.88 3.91
1501 1511 8.963725 TCAATTCTGAATGTAATCATCTTGCTT 58.036 29.630 3.22 0.00 32.56 3.91
1502 1512 9.020813 CAATTCTGAATGTAATCATCTTGCTTG 57.979 33.333 3.22 0.00 32.56 4.01
1503 1513 7.926674 TTCTGAATGTAATCATCTTGCTTGA 57.073 32.000 0.00 0.00 32.56 3.02
1504 1514 8.515695 TTCTGAATGTAATCATCTTGCTTGAT 57.484 30.769 0.00 0.00 35.35 2.57
1505 1515 8.515695 TCTGAATGTAATCATCTTGCTTGATT 57.484 30.769 4.53 4.53 44.05 2.57
1506 1516 9.617523 TCTGAATGTAATCATCTTGCTTGATTA 57.382 29.630 2.79 2.79 42.33 1.75
1516 1526 9.798994 ATCATCTTGCTTGATTAATGAAAGTTC 57.201 29.630 0.00 0.00 29.55 3.01
1517 1527 8.246180 TCATCTTGCTTGATTAATGAAAGTTCC 58.754 33.333 0.00 0.00 0.00 3.62
1518 1528 7.765695 TCTTGCTTGATTAATGAAAGTTCCT 57.234 32.000 0.00 0.00 0.00 3.36
1519 1529 8.181904 TCTTGCTTGATTAATGAAAGTTCCTT 57.818 30.769 0.00 0.00 0.00 3.36
1520 1530 8.641541 TCTTGCTTGATTAATGAAAGTTCCTTT 58.358 29.630 0.00 0.00 36.29 3.11
1521 1531 8.816640 TTGCTTGATTAATGAAAGTTCCTTTC 57.183 30.769 9.27 9.27 46.88 2.62
1522 1532 7.378181 TGCTTGATTAATGAAAGTTCCTTTCC 58.622 34.615 12.73 0.00 46.36 3.13
1523 1533 6.813649 GCTTGATTAATGAAAGTTCCTTTCCC 59.186 38.462 12.73 0.00 46.36 3.97
1524 1534 6.509418 TGATTAATGAAAGTTCCTTTCCCG 57.491 37.500 12.73 0.00 46.36 5.14
1525 1535 4.776795 TTAATGAAAGTTCCTTTCCCGC 57.223 40.909 12.73 0.00 46.36 6.13
1526 1536 2.286365 ATGAAAGTTCCTTTCCCGCA 57.714 45.000 12.73 0.00 46.36 5.69
1527 1537 2.060050 TGAAAGTTCCTTTCCCGCAA 57.940 45.000 12.73 0.00 46.36 4.85
1528 1538 2.379972 TGAAAGTTCCTTTCCCGCAAA 58.620 42.857 12.73 0.00 46.36 3.68
1529 1539 2.761208 TGAAAGTTCCTTTCCCGCAAAA 59.239 40.909 12.73 0.00 46.36 2.44
1530 1540 3.195825 TGAAAGTTCCTTTCCCGCAAAAA 59.804 39.130 12.73 0.00 46.36 1.94
1632 1642 1.356059 TGCAGTTACCAAATAGGGGCA 59.644 47.619 0.00 0.00 43.89 5.36
1636 1646 4.196971 CAGTTACCAAATAGGGGCACTAC 58.803 47.826 0.00 0.00 43.89 2.73
1715 1725 4.398044 ACATAGTCGCTTTAACCCAATTGG 59.602 41.667 18.21 18.21 41.37 3.16
1979 1991 4.530161 GCATCATACAGGGGAGAGAATACT 59.470 45.833 0.00 0.00 0.00 2.12
2002 2014 6.465439 TCACCACTCGTGATATTTGATACT 57.535 37.500 0.00 0.00 46.80 2.12
2003 2015 6.504398 TCACCACTCGTGATATTTGATACTC 58.496 40.000 0.00 0.00 46.80 2.59
2004 2016 5.692204 CACCACTCGTGATATTTGATACTCC 59.308 44.000 0.00 0.00 46.20 3.85
2067 2079 6.530019 AGATTTGTTGTCAGAGGTTGTTTT 57.470 33.333 0.00 0.00 0.00 2.43
2092 2104 1.597742 AGTTGCTGGCAGTTACTGTG 58.402 50.000 17.16 6.09 33.43 3.66
2123 2135 9.614792 GACTATGGCTTAGATCCTTTTCTTTTA 57.385 33.333 13.76 0.00 0.00 1.52
2126 2138 7.100458 TGGCTTAGATCCTTTTCTTTTATGC 57.900 36.000 0.00 0.00 0.00 3.14
2127 2139 6.663093 TGGCTTAGATCCTTTTCTTTTATGCA 59.337 34.615 0.00 0.00 0.00 3.96
2128 2140 6.975197 GGCTTAGATCCTTTTCTTTTATGCAC 59.025 38.462 0.00 0.00 0.00 4.57
2153 4200 1.675641 GCCACCATCCACCACTCAC 60.676 63.158 0.00 0.00 0.00 3.51
2180 4227 0.868406 GCACGAGTGGAGTGAAAAGG 59.132 55.000 5.32 0.00 41.83 3.11
2200 4247 2.375174 GGGGTGGATATTATGTGAGCCA 59.625 50.000 0.00 0.00 0.00 4.75
2414 4466 6.839124 AGATTGTGCAATAATTCACTTCCA 57.161 33.333 0.00 0.00 34.49 3.53
2430 4482 4.984161 CACTTCCAATCAATCACCAAACAC 59.016 41.667 0.00 0.00 0.00 3.32
2435 4487 4.202243 CCAATCAATCACCAAACACACCTT 60.202 41.667 0.00 0.00 0.00 3.50
2436 4488 5.010516 CCAATCAATCACCAAACACACCTTA 59.989 40.000 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.118286 ACATGAGATATGTTGCATTCGTCA 58.882 37.500 0.00 0.00 0.00 4.35
1 2 5.663795 ACATGAGATATGTTGCATTCGTC 57.336 39.130 0.00 0.00 0.00 4.20
4 5 9.817365 GTACATTACATGAGATATGTTGCATTC 57.183 33.333 0.00 0.00 33.58 2.67
160 161 3.791245 TGCAAACCTTTTCCACACAATC 58.209 40.909 0.00 0.00 0.00 2.67
345 346 8.178313 GGACTTCTTGACAAGCAGATATTTAAC 58.822 37.037 19.82 3.09 0.00 2.01
408 409 8.377034 TGGTATTAAACTGTACCAATGTAGTGT 58.623 33.333 3.65 0.00 45.39 3.55
524 530 0.390124 ACTGGGTGCAGCACAATTTG 59.610 50.000 26.78 13.43 35.86 2.32
528 534 1.407258 GTAAAACTGGGTGCAGCACAA 59.593 47.619 26.78 13.39 35.86 3.33
554 560 9.636965 GTTCAGTTTCAGTTTATTGCAATTTTC 57.363 29.630 18.75 8.14 0.00 2.29
665 671 6.769341 GTGTGGAGTTTACCTTTTCCTTTCTA 59.231 38.462 0.00 0.00 0.00 2.10
687 694 9.944376 ATGTGTTAGTATTTCTAATCAGTGTGT 57.056 29.630 0.00 0.00 40.23 3.72
796 805 7.765695 TCAGCAGTTTCAAATTCCTATCTTT 57.234 32.000 0.00 0.00 0.00 2.52
935 944 5.067153 ACACATTACAGTTGCAGCTAACAAA 59.933 36.000 1.52 0.00 33.02 2.83
993 1003 6.404708 AGTGAATCATAGCAGGCTGTATATG 58.595 40.000 24.26 24.26 0.00 1.78
1081 1091 1.072852 GGATCATCCTGGCTCCAGC 59.927 63.158 10.37 0.00 42.35 4.85
1091 1101 3.995526 TGATCACGCAGGATCATCC 57.004 52.632 11.99 0.00 46.46 3.51
1095 1105 3.733337 ACCTTTATGATCACGCAGGATC 58.267 45.455 18.57 7.47 43.19 3.36
1096 1106 3.845781 ACCTTTATGATCACGCAGGAT 57.154 42.857 18.57 4.76 0.00 3.24
1097 1107 3.490249 CGTACCTTTATGATCACGCAGGA 60.490 47.826 18.57 4.32 0.00 3.86
1098 1108 2.794910 CGTACCTTTATGATCACGCAGG 59.205 50.000 12.43 12.43 0.00 4.85
1099 1109 2.794910 CCGTACCTTTATGATCACGCAG 59.205 50.000 0.00 0.00 0.00 5.18
1100 1110 2.166870 ACCGTACCTTTATGATCACGCA 59.833 45.455 0.00 0.00 0.00 5.24
1101 1111 2.793232 GACCGTACCTTTATGATCACGC 59.207 50.000 0.00 0.00 0.00 5.34
1102 1112 4.036567 TGACCGTACCTTTATGATCACG 57.963 45.455 0.00 0.00 0.00 4.35
1103 1113 5.844004 AGATGACCGTACCTTTATGATCAC 58.156 41.667 0.00 0.00 0.00 3.06
1104 1114 6.479972 AAGATGACCGTACCTTTATGATCA 57.520 37.500 0.00 0.00 0.00 2.92
1105 1115 6.292919 GCAAAGATGACCGTACCTTTATGATC 60.293 42.308 0.00 0.00 0.00 2.92
1106 1116 5.527582 GCAAAGATGACCGTACCTTTATGAT 59.472 40.000 0.00 0.00 0.00 2.45
1107 1117 4.873827 GCAAAGATGACCGTACCTTTATGA 59.126 41.667 0.00 0.00 0.00 2.15
1108 1118 4.876107 AGCAAAGATGACCGTACCTTTATG 59.124 41.667 0.00 0.00 0.00 1.90
1109 1119 4.876107 CAGCAAAGATGACCGTACCTTTAT 59.124 41.667 0.00 0.00 0.00 1.40
1110 1120 4.250464 CAGCAAAGATGACCGTACCTTTA 58.750 43.478 0.00 0.00 0.00 1.85
1111 1121 3.074412 CAGCAAAGATGACCGTACCTTT 58.926 45.455 0.00 0.00 0.00 3.11
1112 1122 2.699954 CAGCAAAGATGACCGTACCTT 58.300 47.619 0.00 0.00 0.00 3.50
1113 1123 1.676014 GCAGCAAAGATGACCGTACCT 60.676 52.381 0.00 0.00 0.00 3.08
1114 1124 0.727398 GCAGCAAAGATGACCGTACC 59.273 55.000 0.00 0.00 0.00 3.34
1115 1125 0.727398 GGCAGCAAAGATGACCGTAC 59.273 55.000 0.00 0.00 0.00 3.67
1116 1126 0.323302 TGGCAGCAAAGATGACCGTA 59.677 50.000 0.00 0.00 0.00 4.02
1117 1127 0.322816 ATGGCAGCAAAGATGACCGT 60.323 50.000 0.00 0.00 0.00 4.83
1118 1128 1.331756 GTATGGCAGCAAAGATGACCG 59.668 52.381 0.00 0.00 0.00 4.79
1119 1129 1.331756 CGTATGGCAGCAAAGATGACC 59.668 52.381 0.00 0.00 0.00 4.02
1120 1130 1.268234 GCGTATGGCAGCAAAGATGAC 60.268 52.381 0.00 0.00 42.87 3.06
1121 1131 1.016627 GCGTATGGCAGCAAAGATGA 58.983 50.000 0.00 0.00 42.87 2.92
1122 1132 3.539253 GCGTATGGCAGCAAAGATG 57.461 52.632 0.00 0.00 42.87 2.90
1132 1142 3.851403 CAGTTAAACAACATGCGTATGGC 59.149 43.478 18.03 0.00 38.66 4.40
1133 1143 4.851014 CACAGTTAAACAACATGCGTATGG 59.149 41.667 18.03 3.42 38.66 2.74
1134 1144 5.448438 ACACAGTTAAACAACATGCGTATG 58.552 37.500 12.28 12.28 40.24 2.39
1135 1145 5.682943 ACACAGTTAAACAACATGCGTAT 57.317 34.783 0.00 0.00 0.00 3.06
1136 1146 5.064834 TCAACACAGTTAAACAACATGCGTA 59.935 36.000 0.00 0.00 0.00 4.42
1137 1147 4.101942 CAACACAGTTAAACAACATGCGT 58.898 39.130 0.00 0.00 0.00 5.24
1138 1148 4.346970 TCAACACAGTTAAACAACATGCG 58.653 39.130 0.00 0.00 0.00 4.73
1139 1149 5.332506 GCATCAACACAGTTAAACAACATGC 60.333 40.000 0.00 0.00 0.00 4.06
1140 1150 5.175491 GGCATCAACACAGTTAAACAACATG 59.825 40.000 0.00 0.00 0.00 3.21
1141 1151 5.288804 GGCATCAACACAGTTAAACAACAT 58.711 37.500 0.00 0.00 0.00 2.71
1142 1152 4.440802 GGGCATCAACACAGTTAAACAACA 60.441 41.667 0.00 0.00 0.00 3.33
1143 1153 4.048504 GGGCATCAACACAGTTAAACAAC 58.951 43.478 0.00 0.00 0.00 3.32
1144 1154 3.957497 AGGGCATCAACACAGTTAAACAA 59.043 39.130 0.00 0.00 0.00 2.83
1145 1155 3.317711 CAGGGCATCAACACAGTTAAACA 59.682 43.478 0.00 0.00 0.00 2.83
1146 1156 3.305335 CCAGGGCATCAACACAGTTAAAC 60.305 47.826 0.00 0.00 0.00 2.01
1147 1157 2.890311 CCAGGGCATCAACACAGTTAAA 59.110 45.455 0.00 0.00 0.00 1.52
1148 1158 2.107378 TCCAGGGCATCAACACAGTTAA 59.893 45.455 0.00 0.00 0.00 2.01
1149 1159 1.702401 TCCAGGGCATCAACACAGTTA 59.298 47.619 0.00 0.00 0.00 2.24
1150 1160 0.478072 TCCAGGGCATCAACACAGTT 59.522 50.000 0.00 0.00 0.00 3.16
1151 1161 0.478072 TTCCAGGGCATCAACACAGT 59.522 50.000 0.00 0.00 0.00 3.55
1152 1162 1.171308 CTTCCAGGGCATCAACACAG 58.829 55.000 0.00 0.00 0.00 3.66
1153 1163 0.895100 GCTTCCAGGGCATCAACACA 60.895 55.000 0.00 0.00 0.00 3.72
1154 1164 1.885871 GCTTCCAGGGCATCAACAC 59.114 57.895 0.00 0.00 0.00 3.32
1155 1165 1.675310 CGCTTCCAGGGCATCAACA 60.675 57.895 0.00 0.00 0.00 3.33
1156 1166 2.409870 CCGCTTCCAGGGCATCAAC 61.410 63.158 0.00 0.00 0.00 3.18
1157 1167 2.045045 CCGCTTCCAGGGCATCAA 60.045 61.111 0.00 0.00 0.00 2.57
1158 1168 3.008517 TCCGCTTCCAGGGCATCA 61.009 61.111 0.00 0.00 0.00 3.07
1159 1169 2.203126 CTCCGCTTCCAGGGCATC 60.203 66.667 0.00 0.00 0.00 3.91
1160 1170 3.801997 CCTCCGCTTCCAGGGCAT 61.802 66.667 0.00 0.00 0.00 4.40
1174 1184 4.615815 ATCCATCGCTGCCGCCTC 62.616 66.667 0.00 0.00 0.00 4.70
1175 1185 4.923942 CATCCATCGCTGCCGCCT 62.924 66.667 0.00 0.00 0.00 5.52
1176 1186 4.916293 TCATCCATCGCTGCCGCC 62.916 66.667 0.00 0.00 0.00 6.13
1177 1187 2.890109 CTTCATCCATCGCTGCCGC 61.890 63.158 0.00 0.00 0.00 6.53
1178 1188 2.249535 CCTTCATCCATCGCTGCCG 61.250 63.158 0.00 0.00 0.00 5.69
1179 1189 1.895707 CCCTTCATCCATCGCTGCC 60.896 63.158 0.00 0.00 0.00 4.85
1180 1190 2.550101 GCCCTTCATCCATCGCTGC 61.550 63.158 0.00 0.00 0.00 5.25
1181 1191 0.883814 GAGCCCTTCATCCATCGCTG 60.884 60.000 0.00 0.00 0.00 5.18
1182 1192 1.449353 GAGCCCTTCATCCATCGCT 59.551 57.895 0.00 0.00 0.00 4.93
1183 1193 1.599240 GGAGCCCTTCATCCATCGC 60.599 63.158 0.00 0.00 35.54 4.58
1184 1194 1.301244 CGGAGCCCTTCATCCATCG 60.301 63.158 0.00 0.00 35.14 3.84
1185 1195 1.072159 CCGGAGCCCTTCATCCATC 59.928 63.158 0.00 0.00 35.14 3.51
1186 1196 3.125376 GCCGGAGCCCTTCATCCAT 62.125 63.158 5.05 0.00 35.14 3.41
1187 1197 3.797353 GCCGGAGCCCTTCATCCA 61.797 66.667 5.05 0.00 35.14 3.41
1188 1198 3.049080 AAGCCGGAGCCCTTCATCC 62.049 63.158 5.05 0.00 41.25 3.51
1189 1199 1.821332 CAAGCCGGAGCCCTTCATC 60.821 63.158 5.05 0.00 41.25 2.92
1190 1200 2.273449 CAAGCCGGAGCCCTTCAT 59.727 61.111 5.05 0.00 41.25 2.57
1191 1201 4.722700 GCAAGCCGGAGCCCTTCA 62.723 66.667 5.05 0.00 41.25 3.02
1192 1202 4.416738 AGCAAGCCGGAGCCCTTC 62.417 66.667 5.05 0.00 41.25 3.46
1193 1203 4.416738 GAGCAAGCCGGAGCCCTT 62.417 66.667 5.05 0.00 41.25 3.95
1195 1205 4.847444 GAGAGCAAGCCGGAGCCC 62.847 72.222 5.05 0.00 41.25 5.19
1196 1206 4.847444 GGAGAGCAAGCCGGAGCC 62.847 72.222 5.05 0.00 41.25 4.70
1197 1207 4.087892 TGGAGAGCAAGCCGGAGC 62.088 66.667 5.05 5.59 40.32 4.70
1198 1208 2.125350 GTGGAGAGCAAGCCGGAG 60.125 66.667 5.05 0.00 0.00 4.63
1199 1209 2.604686 AGTGGAGAGCAAGCCGGA 60.605 61.111 5.05 0.00 0.00 5.14
1200 1210 2.435586 CAGTGGAGAGCAAGCCGG 60.436 66.667 0.00 0.00 0.00 6.13
1201 1211 2.435586 CCAGTGGAGAGCAAGCCG 60.436 66.667 1.68 0.00 0.00 5.52
1202 1212 1.376553 GTCCAGTGGAGAGCAAGCC 60.377 63.158 13.61 0.00 29.39 4.35
1203 1213 0.250467 TTGTCCAGTGGAGAGCAAGC 60.250 55.000 13.61 0.00 29.39 4.01
1204 1214 1.876156 GTTTGTCCAGTGGAGAGCAAG 59.124 52.381 13.61 0.00 29.39 4.01
1205 1215 1.490490 AGTTTGTCCAGTGGAGAGCAA 59.510 47.619 13.61 10.90 29.39 3.91
1206 1216 1.070758 GAGTTTGTCCAGTGGAGAGCA 59.929 52.381 13.61 4.23 29.39 4.26
1207 1217 1.070758 TGAGTTTGTCCAGTGGAGAGC 59.929 52.381 13.61 8.42 29.39 4.09
1208 1218 2.548920 GGTGAGTTTGTCCAGTGGAGAG 60.549 54.545 13.61 0.00 29.39 3.20
1209 1219 1.416401 GGTGAGTTTGTCCAGTGGAGA 59.584 52.381 13.61 8.97 29.39 3.71
1210 1220 1.417890 AGGTGAGTTTGTCCAGTGGAG 59.582 52.381 13.61 0.00 29.39 3.86
1211 1221 1.416401 GAGGTGAGTTTGTCCAGTGGA 59.584 52.381 8.12 8.12 0.00 4.02
1212 1222 1.417890 AGAGGTGAGTTTGTCCAGTGG 59.582 52.381 1.40 1.40 0.00 4.00
1213 1223 2.487934 CAGAGGTGAGTTTGTCCAGTG 58.512 52.381 0.00 0.00 0.00 3.66
1214 1224 1.417890 CCAGAGGTGAGTTTGTCCAGT 59.582 52.381 0.00 0.00 0.00 4.00
1215 1225 1.417890 ACCAGAGGTGAGTTTGTCCAG 59.582 52.381 0.00 0.00 32.98 3.86
1216 1226 1.507140 ACCAGAGGTGAGTTTGTCCA 58.493 50.000 0.00 0.00 32.98 4.02
1217 1227 2.633481 ACTACCAGAGGTGAGTTTGTCC 59.367 50.000 0.00 0.00 36.19 4.02
1218 1228 3.555168 CCACTACCAGAGGTGAGTTTGTC 60.555 52.174 0.00 0.00 36.19 3.18
1219 1229 2.368875 CCACTACCAGAGGTGAGTTTGT 59.631 50.000 0.00 0.00 36.19 2.83
1220 1230 2.632996 TCCACTACCAGAGGTGAGTTTG 59.367 50.000 0.00 0.00 36.19 2.93
1221 1231 2.900546 CTCCACTACCAGAGGTGAGTTT 59.099 50.000 0.00 0.00 36.19 2.66
1222 1232 2.110188 TCTCCACTACCAGAGGTGAGTT 59.890 50.000 0.00 0.00 36.19 3.01
1223 1233 1.711375 TCTCCACTACCAGAGGTGAGT 59.289 52.381 0.00 0.00 36.19 3.41
1224 1234 2.516227 TCTCCACTACCAGAGGTGAG 57.484 55.000 0.00 0.00 36.19 3.51
1225 1235 2.624293 CCATCTCCACTACCAGAGGTGA 60.624 54.545 1.90 0.00 42.74 4.02
1226 1236 1.759445 CCATCTCCACTACCAGAGGTG 59.241 57.143 0.00 0.00 40.31 4.00
1227 1237 1.646447 TCCATCTCCACTACCAGAGGT 59.354 52.381 0.00 0.00 40.16 3.85
1228 1238 2.035632 GTCCATCTCCACTACCAGAGG 58.964 57.143 0.00 0.00 0.00 3.69
1229 1239 2.692557 CAGTCCATCTCCACTACCAGAG 59.307 54.545 0.00 0.00 0.00 3.35
1230 1240 2.739943 CAGTCCATCTCCACTACCAGA 58.260 52.381 0.00 0.00 0.00 3.86
1231 1241 1.137872 GCAGTCCATCTCCACTACCAG 59.862 57.143 0.00 0.00 0.00 4.00
1232 1242 1.195115 GCAGTCCATCTCCACTACCA 58.805 55.000 0.00 0.00 0.00 3.25
1233 1243 0.103208 CGCAGTCCATCTCCACTACC 59.897 60.000 0.00 0.00 0.00 3.18
1234 1244 0.528684 GCGCAGTCCATCTCCACTAC 60.529 60.000 0.30 0.00 0.00 2.73
1235 1245 0.684479 AGCGCAGTCCATCTCCACTA 60.684 55.000 11.47 0.00 0.00 2.74
1236 1246 1.986757 AGCGCAGTCCATCTCCACT 60.987 57.895 11.47 0.00 0.00 4.00
1237 1247 1.812922 CAGCGCAGTCCATCTCCAC 60.813 63.158 11.47 0.00 0.00 4.02
1238 1248 1.953231 CTCAGCGCAGTCCATCTCCA 61.953 60.000 11.47 0.00 0.00 3.86
1239 1249 1.227205 CTCAGCGCAGTCCATCTCC 60.227 63.158 11.47 0.00 0.00 3.71
1240 1250 0.108424 AACTCAGCGCAGTCCATCTC 60.108 55.000 11.47 0.00 0.00 2.75
1241 1251 0.390866 CAACTCAGCGCAGTCCATCT 60.391 55.000 11.47 0.00 0.00 2.90
1242 1252 0.671781 ACAACTCAGCGCAGTCCATC 60.672 55.000 11.47 0.00 0.00 3.51
1243 1253 0.250467 AACAACTCAGCGCAGTCCAT 60.250 50.000 11.47 0.00 0.00 3.41
1244 1254 1.146041 AACAACTCAGCGCAGTCCA 59.854 52.632 11.47 0.00 0.00 4.02
1245 1255 1.571460 CAACAACTCAGCGCAGTCC 59.429 57.895 11.47 0.00 0.00 3.85
1246 1256 1.082496 GCAACAACTCAGCGCAGTC 60.082 57.895 11.47 0.00 0.00 3.51
1247 1257 1.375853 TTGCAACAACTCAGCGCAGT 61.376 50.000 11.47 1.27 33.48 4.40
1248 1258 0.248580 TTTGCAACAACTCAGCGCAG 60.249 50.000 11.47 0.00 33.48 5.18
1249 1259 0.385029 ATTTGCAACAACTCAGCGCA 59.615 45.000 11.47 0.00 0.00 6.09
1250 1260 0.780002 CATTTGCAACAACTCAGCGC 59.220 50.000 0.00 0.00 0.00 5.92
1251 1261 2.404265 TCATTTGCAACAACTCAGCG 57.596 45.000 0.00 0.00 0.00 5.18
1252 1262 4.300803 TGAATCATTTGCAACAACTCAGC 58.699 39.130 0.00 0.00 0.00 4.26
1253 1263 6.643360 TGATTGAATCATTTGCAACAACTCAG 59.357 34.615 3.29 0.00 33.59 3.35
1254 1264 6.514063 TGATTGAATCATTTGCAACAACTCA 58.486 32.000 3.29 3.08 33.59 3.41
1255 1265 7.383029 TCTTGATTGAATCATTTGCAACAACTC 59.617 33.333 8.90 0.68 39.39 3.01
1256 1266 7.211573 TCTTGATTGAATCATTTGCAACAACT 58.788 30.769 8.90 0.00 39.39 3.16
1257 1267 7.383029 TCTCTTGATTGAATCATTTGCAACAAC 59.617 33.333 8.90 0.00 39.39 3.32
1258 1268 7.383029 GTCTCTTGATTGAATCATTTGCAACAA 59.617 33.333 8.90 0.00 39.39 2.83
1259 1269 6.864685 GTCTCTTGATTGAATCATTTGCAACA 59.135 34.615 8.90 0.00 39.39 3.33
1260 1270 6.033196 CGTCTCTTGATTGAATCATTTGCAAC 59.967 38.462 8.90 2.98 39.39 4.17
1261 1271 6.088173 CGTCTCTTGATTGAATCATTTGCAA 58.912 36.000 8.90 0.00 39.39 4.08
1262 1272 5.181811 ACGTCTCTTGATTGAATCATTTGCA 59.818 36.000 8.90 0.00 39.39 4.08
1263 1273 5.634896 ACGTCTCTTGATTGAATCATTTGC 58.365 37.500 8.90 0.00 39.39 3.68
1264 1274 7.300320 TCAACGTCTCTTGATTGAATCATTTG 58.700 34.615 8.90 3.24 39.39 2.32
1265 1275 7.439157 TCAACGTCTCTTGATTGAATCATTT 57.561 32.000 8.90 0.00 39.39 2.32
1266 1276 7.621428 ATCAACGTCTCTTGATTGAATCATT 57.379 32.000 8.90 0.00 37.57 2.57
1267 1277 8.200120 TCTATCAACGTCTCTTGATTGAATCAT 58.800 33.333 8.90 0.00 40.60 2.45
1268 1278 7.547227 TCTATCAACGTCTCTTGATTGAATCA 58.453 34.615 3.29 3.29 40.60 2.57
1269 1279 7.993821 TCTATCAACGTCTCTTGATTGAATC 57.006 36.000 5.82 0.00 40.60 2.52
1270 1280 8.200120 TGATCTATCAACGTCTCTTGATTGAAT 58.800 33.333 13.46 5.62 42.09 2.57
1271 1281 7.489435 GTGATCTATCAACGTCTCTTGATTGAA 59.511 37.037 13.46 0.16 42.09 2.69
1272 1282 6.975197 GTGATCTATCAACGTCTCTTGATTGA 59.025 38.462 12.33 12.33 42.60 2.57
1273 1283 6.075152 CGTGATCTATCAACGTCTCTTGATTG 60.075 42.308 5.82 4.74 40.60 2.67
1274 1284 5.974158 CGTGATCTATCAACGTCTCTTGATT 59.026 40.000 5.82 0.00 40.60 2.57
1275 1285 5.506483 CCGTGATCTATCAACGTCTCTTGAT 60.506 44.000 5.81 5.81 42.40 2.57
1276 1286 4.201920 CCGTGATCTATCAACGTCTCTTGA 60.202 45.833 0.00 0.00 38.75 3.02
1277 1287 4.038361 CCGTGATCTATCAACGTCTCTTG 58.962 47.826 0.00 0.00 38.75 3.02
1278 1288 3.695060 ACCGTGATCTATCAACGTCTCTT 59.305 43.478 0.00 0.00 38.75 2.85
1279 1289 3.280295 ACCGTGATCTATCAACGTCTCT 58.720 45.455 0.00 0.00 38.75 3.10
1280 1290 3.694535 ACCGTGATCTATCAACGTCTC 57.305 47.619 0.00 0.00 38.75 3.36
1281 1291 3.002042 CGTACCGTGATCTATCAACGTCT 59.998 47.826 6.71 0.00 38.75 4.18
1282 1292 3.242543 ACGTACCGTGATCTATCAACGTC 60.243 47.826 12.42 4.60 43.07 4.34
1283 1293 2.679837 ACGTACCGTGATCTATCAACGT 59.320 45.455 12.42 12.42 42.32 3.99
1284 1294 3.329743 ACGTACCGTGATCTATCAACG 57.670 47.619 11.41 11.41 40.89 4.10
1296 1306 2.689471 TCTTATATGGTGCACGTACCGT 59.311 45.455 11.45 7.37 43.87 4.83
1297 1307 3.004002 TCTCTTATATGGTGCACGTACCG 59.996 47.826 11.45 0.00 43.87 4.02
1298 1308 4.277672 TCTCTCTTATATGGTGCACGTACC 59.722 45.833 11.45 0.20 41.24 3.34
1299 1309 5.434352 TCTCTCTTATATGGTGCACGTAC 57.566 43.478 11.45 0.00 0.00 3.67
1300 1310 5.768164 TGATCTCTCTTATATGGTGCACGTA 59.232 40.000 11.45 6.90 0.00 3.57
1301 1311 4.584743 TGATCTCTCTTATATGGTGCACGT 59.415 41.667 11.45 4.59 0.00 4.49
1302 1312 5.048434 TCTGATCTCTCTTATATGGTGCACG 60.048 44.000 11.45 0.00 0.00 5.34
1303 1313 6.338214 TCTGATCTCTCTTATATGGTGCAC 57.662 41.667 8.80 8.80 0.00 4.57
1304 1314 6.014755 CCTTCTGATCTCTCTTATATGGTGCA 60.015 42.308 0.00 0.00 0.00 4.57
1305 1315 6.210385 TCCTTCTGATCTCTCTTATATGGTGC 59.790 42.308 0.00 0.00 0.00 5.01
1306 1316 7.773489 TCCTTCTGATCTCTCTTATATGGTG 57.227 40.000 0.00 0.00 0.00 4.17
1307 1317 8.971032 AATCCTTCTGATCTCTCTTATATGGT 57.029 34.615 0.00 0.00 31.61 3.55
1308 1318 9.258629 AGAATCCTTCTGATCTCTCTTATATGG 57.741 37.037 0.00 0.00 38.91 2.74
1324 1334 5.545723 TCCTTTCTTGAGTCAGAATCCTTCT 59.454 40.000 0.00 0.00 41.70 2.85
1325 1335 5.799213 TCCTTTCTTGAGTCAGAATCCTTC 58.201 41.667 0.00 0.00 32.69 3.46
1326 1336 5.832539 TCCTTTCTTGAGTCAGAATCCTT 57.167 39.130 0.00 0.00 32.69 3.36
1327 1337 5.072329 TGTTCCTTTCTTGAGTCAGAATCCT 59.928 40.000 0.00 0.00 32.69 3.24
1328 1338 5.308825 TGTTCCTTTCTTGAGTCAGAATCC 58.691 41.667 0.00 0.00 32.69 3.01
1329 1339 7.446001 AATGTTCCTTTCTTGAGTCAGAATC 57.554 36.000 0.00 0.00 32.69 2.52
1330 1340 8.160106 ACTAATGTTCCTTTCTTGAGTCAGAAT 58.840 33.333 0.00 0.00 32.69 2.40
1331 1341 7.509546 ACTAATGTTCCTTTCTTGAGTCAGAA 58.490 34.615 0.00 0.00 0.00 3.02
1332 1342 7.015682 AGACTAATGTTCCTTTCTTGAGTCAGA 59.984 37.037 0.00 0.00 34.57 3.27
1333 1343 7.158021 AGACTAATGTTCCTTTCTTGAGTCAG 58.842 38.462 0.00 0.00 34.57 3.51
1334 1344 7.067496 AGACTAATGTTCCTTTCTTGAGTCA 57.933 36.000 0.00 0.00 34.57 3.41
1335 1345 7.276878 GCTAGACTAATGTTCCTTTCTTGAGTC 59.723 40.741 0.00 0.00 0.00 3.36
1336 1346 7.038658 AGCTAGACTAATGTTCCTTTCTTGAGT 60.039 37.037 0.00 0.00 0.00 3.41
1337 1347 7.327214 AGCTAGACTAATGTTCCTTTCTTGAG 58.673 38.462 0.00 0.00 0.00 3.02
1338 1348 7.246171 AGCTAGACTAATGTTCCTTTCTTGA 57.754 36.000 0.00 0.00 0.00 3.02
1339 1349 9.092876 CTTAGCTAGACTAATGTTCCTTTCTTG 57.907 37.037 0.00 0.00 40.11 3.02
1340 1350 9.036980 TCTTAGCTAGACTAATGTTCCTTTCTT 57.963 33.333 0.00 0.00 40.11 2.52
1341 1351 8.596781 TCTTAGCTAGACTAATGTTCCTTTCT 57.403 34.615 0.00 0.00 40.11 2.52
1342 1352 9.471084 GATCTTAGCTAGACTAATGTTCCTTTC 57.529 37.037 0.00 0.00 40.11 2.62
1343 1353 8.982723 TGATCTTAGCTAGACTAATGTTCCTTT 58.017 33.333 0.00 0.00 40.11 3.11
1344 1354 8.540507 TGATCTTAGCTAGACTAATGTTCCTT 57.459 34.615 0.00 0.00 40.11 3.36
1345 1355 7.255801 GCTGATCTTAGCTAGACTAATGTTCCT 60.256 40.741 0.00 0.00 40.11 3.36
1346 1356 6.866248 GCTGATCTTAGCTAGACTAATGTTCC 59.134 42.308 0.00 0.00 40.11 3.62
1347 1357 6.866248 GGCTGATCTTAGCTAGACTAATGTTC 59.134 42.308 5.15 0.44 43.22 3.18
1348 1358 6.515862 CGGCTGATCTTAGCTAGACTAATGTT 60.516 42.308 5.15 0.00 43.22 2.71
1349 1359 5.048364 CGGCTGATCTTAGCTAGACTAATGT 60.048 44.000 5.15 0.00 43.22 2.71
1350 1360 5.182190 TCGGCTGATCTTAGCTAGACTAATG 59.818 44.000 5.15 0.00 43.22 1.90
1351 1361 5.182380 GTCGGCTGATCTTAGCTAGACTAAT 59.818 44.000 17.97 0.00 42.32 1.73
1352 1362 4.515944 GTCGGCTGATCTTAGCTAGACTAA 59.484 45.833 17.97 0.18 42.32 2.24
1353 1363 4.066490 GTCGGCTGATCTTAGCTAGACTA 58.934 47.826 17.97 0.00 42.32 2.59
1354 1364 2.882137 GTCGGCTGATCTTAGCTAGACT 59.118 50.000 17.97 0.00 42.32 3.24
1355 1365 2.619177 TGTCGGCTGATCTTAGCTAGAC 59.381 50.000 18.21 18.21 43.97 2.59
1356 1366 2.932261 TGTCGGCTGATCTTAGCTAGA 58.068 47.619 0.00 3.20 43.22 2.43
1357 1367 3.573598 CATGTCGGCTGATCTTAGCTAG 58.426 50.000 0.00 1.14 43.22 3.42
1358 1368 2.288457 GCATGTCGGCTGATCTTAGCTA 60.288 50.000 0.00 0.00 43.22 3.32
1359 1369 1.539929 GCATGTCGGCTGATCTTAGCT 60.540 52.381 0.00 0.00 43.22 3.32
1360 1370 0.864455 GCATGTCGGCTGATCTTAGC 59.136 55.000 0.00 0.00 42.94 3.09
1361 1371 2.229675 TGCATGTCGGCTGATCTTAG 57.770 50.000 0.00 0.00 34.04 2.18
1362 1372 2.689553 TTGCATGTCGGCTGATCTTA 57.310 45.000 0.00 0.00 34.04 2.10
1363 1373 1.825090 TTTGCATGTCGGCTGATCTT 58.175 45.000 0.00 0.00 34.04 2.40
1364 1374 1.674441 CATTTGCATGTCGGCTGATCT 59.326 47.619 0.00 0.00 34.04 2.75
1365 1375 1.672363 TCATTTGCATGTCGGCTGATC 59.328 47.619 0.00 0.00 34.04 2.92
1366 1376 1.753930 TCATTTGCATGTCGGCTGAT 58.246 45.000 0.00 0.00 34.04 2.90
1367 1377 1.469703 CTTCATTTGCATGTCGGCTGA 59.530 47.619 0.00 0.00 34.04 4.26
1368 1378 1.904144 CTTCATTTGCATGTCGGCTG 58.096 50.000 0.00 0.00 34.04 4.85
1369 1379 0.171903 GCTTCATTTGCATGTCGGCT 59.828 50.000 0.00 0.00 34.04 5.52
1370 1380 1.135699 CGCTTCATTTGCATGTCGGC 61.136 55.000 0.00 0.00 0.00 5.54
1371 1381 0.447406 TCGCTTCATTTGCATGTCGG 59.553 50.000 0.00 0.00 0.00 4.79
1372 1382 1.129251 ACTCGCTTCATTTGCATGTCG 59.871 47.619 0.00 0.00 0.00 4.35
1373 1383 2.160219 TGACTCGCTTCATTTGCATGTC 59.840 45.455 0.00 0.00 34.93 3.06
1374 1384 2.095567 GTGACTCGCTTCATTTGCATGT 60.096 45.455 0.00 0.00 0.00 3.21
1375 1385 2.095617 TGTGACTCGCTTCATTTGCATG 60.096 45.455 0.00 0.00 0.00 4.06
1376 1386 2.095567 GTGTGACTCGCTTCATTTGCAT 60.096 45.455 0.00 0.00 0.00 3.96
1377 1387 1.264020 GTGTGACTCGCTTCATTTGCA 59.736 47.619 0.00 0.00 0.00 4.08
1378 1388 1.400242 GGTGTGACTCGCTTCATTTGC 60.400 52.381 0.00 0.00 0.00 3.68
1379 1389 1.197721 GGGTGTGACTCGCTTCATTTG 59.802 52.381 0.00 0.00 0.00 2.32
1380 1390 1.072331 AGGGTGTGACTCGCTTCATTT 59.928 47.619 0.00 0.00 0.00 2.32
1381 1391 0.687354 AGGGTGTGACTCGCTTCATT 59.313 50.000 0.00 0.00 0.00 2.57
1382 1392 0.247736 GAGGGTGTGACTCGCTTCAT 59.752 55.000 5.71 0.00 0.00 2.57
1383 1393 1.666011 GAGGGTGTGACTCGCTTCA 59.334 57.895 5.71 0.00 0.00 3.02
1384 1394 4.580835 GAGGGTGTGACTCGCTTC 57.419 61.111 5.71 0.00 0.00 3.86
1389 1399 0.601558 TACAAGCGAGGGTGTGACTC 59.398 55.000 0.00 0.00 0.00 3.36
1390 1400 1.066858 CATACAAGCGAGGGTGTGACT 60.067 52.381 0.00 0.00 0.00 3.41
1391 1401 1.359848 CATACAAGCGAGGGTGTGAC 58.640 55.000 0.00 0.00 0.00 3.67
1392 1402 0.249120 CCATACAAGCGAGGGTGTGA 59.751 55.000 0.00 0.00 0.00 3.58
1393 1403 0.744414 CCCATACAAGCGAGGGTGTG 60.744 60.000 0.00 0.00 36.52 3.82
1394 1404 1.602237 CCCATACAAGCGAGGGTGT 59.398 57.895 0.00 0.00 36.52 4.16
1395 1405 4.540153 CCCATACAAGCGAGGGTG 57.460 61.111 0.00 0.00 36.52 4.61
1397 1407 1.227263 CGACCCATACAAGCGAGGG 60.227 63.158 0.00 0.00 46.96 4.30
1398 1408 0.108329 AACGACCCATACAAGCGAGG 60.108 55.000 0.00 0.00 0.00 4.63
1399 1409 1.278238 GAACGACCCATACAAGCGAG 58.722 55.000 0.00 0.00 0.00 5.03
1400 1410 0.457166 CGAACGACCCATACAAGCGA 60.457 55.000 0.00 0.00 0.00 4.93
1401 1411 1.995991 CGAACGACCCATACAAGCG 59.004 57.895 0.00 0.00 0.00 4.68
1402 1412 1.017177 TGCGAACGACCCATACAAGC 61.017 55.000 0.00 0.00 0.00 4.01
1403 1413 0.999406 CTGCGAACGACCCATACAAG 59.001 55.000 0.00 0.00 0.00 3.16
1404 1414 1.017177 GCTGCGAACGACCCATACAA 61.017 55.000 0.00 0.00 0.00 2.41
1405 1415 1.447140 GCTGCGAACGACCCATACA 60.447 57.895 0.00 0.00 0.00 2.29
1406 1416 1.421410 CTGCTGCGAACGACCCATAC 61.421 60.000 0.00 0.00 0.00 2.39
1407 1417 1.153647 CTGCTGCGAACGACCCATA 60.154 57.895 0.00 0.00 0.00 2.74
1408 1418 2.434884 CTGCTGCGAACGACCCAT 60.435 61.111 0.00 0.00 0.00 4.00
1424 1434 2.956987 GCCAACATGCAGTTCGCT 59.043 55.556 9.95 0.00 40.61 4.93
1425 1435 0.730494 GAAGCCAACATGCAGTTCGC 60.730 55.000 9.43 9.43 43.59 4.70
1426 1436 0.453282 CGAAGCCAACATGCAGTTCG 60.453 55.000 0.00 0.00 38.74 3.95
1427 1437 0.874390 TCGAAGCCAACATGCAGTTC 59.126 50.000 0.00 0.00 38.74 3.01
1428 1438 1.317613 TTCGAAGCCAACATGCAGTT 58.682 45.000 0.00 0.00 42.42 3.16
1429 1439 1.001378 GTTTCGAAGCCAACATGCAGT 60.001 47.619 0.00 0.00 0.00 4.40
1430 1440 1.267806 AGTTTCGAAGCCAACATGCAG 59.732 47.619 8.51 0.00 0.00 4.41
1431 1441 1.317613 AGTTTCGAAGCCAACATGCA 58.682 45.000 8.51 0.00 0.00 3.96
1432 1442 2.319472 GAAGTTTCGAAGCCAACATGC 58.681 47.619 8.51 0.00 0.00 4.06
1433 1443 2.351738 GGGAAGTTTCGAAGCCAACATG 60.352 50.000 8.51 0.00 0.00 3.21
1434 1444 1.886542 GGGAAGTTTCGAAGCCAACAT 59.113 47.619 8.51 0.00 0.00 2.71
1435 1445 1.133915 AGGGAAGTTTCGAAGCCAACA 60.134 47.619 8.51 0.00 0.00 3.33
1436 1446 1.266989 CAGGGAAGTTTCGAAGCCAAC 59.733 52.381 8.51 0.00 0.00 3.77
1437 1447 1.142060 TCAGGGAAGTTTCGAAGCCAA 59.858 47.619 8.51 0.00 0.00 4.52
1438 1448 0.762418 TCAGGGAAGTTTCGAAGCCA 59.238 50.000 8.51 0.00 0.00 4.75
1439 1449 1.740025 CATCAGGGAAGTTTCGAAGCC 59.260 52.381 8.51 4.35 0.00 4.35
1440 1450 2.675348 CTCATCAGGGAAGTTTCGAAGC 59.325 50.000 3.49 3.49 0.00 3.86
1441 1451 4.193826 TCTCATCAGGGAAGTTTCGAAG 57.806 45.455 0.00 0.00 0.00 3.79
1442 1452 4.826274 ATCTCATCAGGGAAGTTTCGAA 57.174 40.909 0.00 0.00 0.00 3.71
1443 1453 4.202161 GCTATCTCATCAGGGAAGTTTCGA 60.202 45.833 0.00 0.00 0.00 3.71
1444 1454 4.054671 GCTATCTCATCAGGGAAGTTTCG 58.945 47.826 0.00 0.00 0.00 3.46
1445 1455 5.289083 AGCTATCTCATCAGGGAAGTTTC 57.711 43.478 0.00 0.00 0.00 2.78
1446 1456 5.221621 GCTAGCTATCTCATCAGGGAAGTTT 60.222 44.000 7.70 0.00 0.00 2.66
1447 1457 4.283212 GCTAGCTATCTCATCAGGGAAGTT 59.717 45.833 7.70 0.00 0.00 2.66
1448 1458 3.831911 GCTAGCTATCTCATCAGGGAAGT 59.168 47.826 7.70 0.00 0.00 3.01
1449 1459 3.831333 TGCTAGCTATCTCATCAGGGAAG 59.169 47.826 17.23 0.00 0.00 3.46
1450 1460 3.849527 TGCTAGCTATCTCATCAGGGAA 58.150 45.455 17.23 0.00 0.00 3.97
1451 1461 3.532641 TGCTAGCTATCTCATCAGGGA 57.467 47.619 17.23 0.00 0.00 4.20
1452 1462 4.955450 ACTATGCTAGCTATCTCATCAGGG 59.045 45.833 17.23 0.00 0.00 4.45
1453 1463 5.651576 TGACTATGCTAGCTATCTCATCAGG 59.348 44.000 17.23 0.00 0.00 3.86
1454 1464 6.756299 TGACTATGCTAGCTATCTCATCAG 57.244 41.667 17.23 4.03 0.00 2.90
1455 1465 7.715266 ATTGACTATGCTAGCTATCTCATCA 57.285 36.000 17.23 7.73 0.00 3.07
1456 1466 8.469200 AGAATTGACTATGCTAGCTATCTCATC 58.531 37.037 17.23 7.25 0.00 2.92
1457 1467 8.252417 CAGAATTGACTATGCTAGCTATCTCAT 58.748 37.037 17.23 2.04 0.00 2.90
1458 1468 7.449704 TCAGAATTGACTATGCTAGCTATCTCA 59.550 37.037 17.23 8.75 0.00 3.27
1459 1469 7.825681 TCAGAATTGACTATGCTAGCTATCTC 58.174 38.462 17.23 6.22 0.00 2.75
1460 1470 7.773489 TCAGAATTGACTATGCTAGCTATCT 57.227 36.000 17.23 0.66 0.00 1.98
1461 1471 8.871862 CATTCAGAATTGACTATGCTAGCTATC 58.128 37.037 17.23 8.52 31.71 2.08
1462 1472 8.373981 ACATTCAGAATTGACTATGCTAGCTAT 58.626 33.333 17.23 10.27 31.71 2.97
1463 1473 7.730084 ACATTCAGAATTGACTATGCTAGCTA 58.270 34.615 17.23 2.58 31.71 3.32
1464 1474 6.590068 ACATTCAGAATTGACTATGCTAGCT 58.410 36.000 17.23 4.07 31.71 3.32
1465 1475 6.857777 ACATTCAGAATTGACTATGCTAGC 57.142 37.500 8.10 8.10 31.71 3.42
1468 1478 8.969260 TGATTACATTCAGAATTGACTATGCT 57.031 30.769 0.00 0.00 31.71 3.79
1469 1479 9.823098 GATGATTACATTCAGAATTGACTATGC 57.177 33.333 0.00 0.00 36.82 3.14
1473 1483 8.404000 GCAAGATGATTACATTCAGAATTGACT 58.596 33.333 0.00 0.00 36.82 3.41
1474 1484 8.404000 AGCAAGATGATTACATTCAGAATTGAC 58.596 33.333 0.00 0.00 36.82 3.18
1475 1485 8.515695 AGCAAGATGATTACATTCAGAATTGA 57.484 30.769 0.00 0.00 36.82 2.57
1476 1486 9.020813 CAAGCAAGATGATTACATTCAGAATTG 57.979 33.333 0.00 0.00 36.82 2.32
1477 1487 8.963725 TCAAGCAAGATGATTACATTCAGAATT 58.036 29.630 0.00 0.00 36.82 2.17
1478 1488 8.515695 TCAAGCAAGATGATTACATTCAGAAT 57.484 30.769 0.00 0.00 36.82 2.40
1479 1489 7.926674 TCAAGCAAGATGATTACATTCAGAA 57.073 32.000 0.00 0.00 36.82 3.02
1480 1490 8.515695 AATCAAGCAAGATGATTACATTCAGA 57.484 30.769 0.18 0.00 43.73 3.27
1490 1500 9.798994 GAACTTTCATTAATCAAGCAAGATGAT 57.201 29.630 4.45 0.00 39.15 2.45
1491 1501 8.246180 GGAACTTTCATTAATCAAGCAAGATGA 58.754 33.333 4.45 0.00 0.00 2.92
1492 1502 8.248945 AGGAACTTTCATTAATCAAGCAAGATG 58.751 33.333 4.45 0.00 27.25 2.90
1493 1503 8.358582 AGGAACTTTCATTAATCAAGCAAGAT 57.641 30.769 4.45 0.00 27.25 2.40
1494 1504 7.765695 AGGAACTTTCATTAATCAAGCAAGA 57.234 32.000 4.45 0.00 27.25 3.02
1528 1538 9.448438 AAAGTTTACTTCCTCAAGCAAATTTTT 57.552 25.926 0.00 0.00 33.91 1.94
1529 1539 8.882736 CAAAGTTTACTTCCTCAAGCAAATTTT 58.117 29.630 0.00 0.00 36.19 1.82
1530 1540 7.495606 CCAAAGTTTACTTCCTCAAGCAAATTT 59.504 33.333 0.00 0.00 34.61 1.82
1531 1541 6.986231 CCAAAGTTTACTTCCTCAAGCAAATT 59.014 34.615 0.00 0.00 34.61 1.82
1532 1542 6.515832 CCAAAGTTTACTTCCTCAAGCAAAT 58.484 36.000 0.00 0.00 34.61 2.32
1533 1543 5.681179 GCCAAAGTTTACTTCCTCAAGCAAA 60.681 40.000 0.00 0.00 34.61 3.68
1632 1642 3.729217 CGATATTTCGTGATGCGTGTAGT 59.271 43.478 0.00 0.00 40.53 2.73
1650 1660 6.524734 AGGTCACTCATATTGAATTGCGATA 58.475 36.000 0.00 0.00 0.00 2.92
1759 1769 5.310720 AGAACGAATAATTTGTGGGAAGC 57.689 39.130 0.00 0.00 0.00 3.86
1995 2007 5.586243 GCTGCAAATTCAGTAGGAGTATCAA 59.414 40.000 0.00 0.00 34.77 2.57
1999 2011 4.551702 TGCTGCAAATTCAGTAGGAGTA 57.448 40.909 0.00 0.00 36.49 2.59
2000 2012 3.423539 TGCTGCAAATTCAGTAGGAGT 57.576 42.857 0.00 0.00 36.49 3.85
2001 2013 4.978083 AATGCTGCAAATTCAGTAGGAG 57.022 40.909 6.36 0.00 36.49 3.69
2002 2014 6.658816 TCTTAAATGCTGCAAATTCAGTAGGA 59.341 34.615 6.36 0.00 36.49 2.94
2003 2015 6.855836 TCTTAAATGCTGCAAATTCAGTAGG 58.144 36.000 6.36 0.00 36.49 3.18
2004 2016 8.922058 AATCTTAAATGCTGCAAATTCAGTAG 57.078 30.769 6.36 2.40 36.49 2.57
2044 2056 6.530019 AAAACAACCTCTGACAACAAATCT 57.470 33.333 0.00 0.00 0.00 2.40
2067 2079 4.515191 CAGTAACTGCCAGCAACTTTTCTA 59.485 41.667 0.00 0.00 0.00 2.10
2092 2104 2.835156 GGATCTAAGCCATAGTCCCTCC 59.165 54.545 0.00 0.00 31.17 4.30
2123 2135 2.431782 GGATGGTGGCTAAATTGTGCAT 59.568 45.455 0.00 0.00 0.00 3.96
2125 2137 1.824230 TGGATGGTGGCTAAATTGTGC 59.176 47.619 0.00 0.00 0.00 4.57
2126 2138 2.166254 GGTGGATGGTGGCTAAATTGTG 59.834 50.000 0.00 0.00 0.00 3.33
2127 2139 2.225242 TGGTGGATGGTGGCTAAATTGT 60.225 45.455 0.00 0.00 0.00 2.71
2128 2140 2.166254 GTGGTGGATGGTGGCTAAATTG 59.834 50.000 0.00 0.00 0.00 2.32
2153 4200 0.179073 CTCCACTCGTGCTTATGGGG 60.179 60.000 0.00 0.00 32.73 4.96
2180 4227 3.327757 TCTGGCTCACATAATATCCACCC 59.672 47.826 0.00 0.00 0.00 4.61
2200 4247 6.410942 AAAAAGGCTTTGCAATCTTACTCT 57.589 33.333 14.19 0.00 0.00 3.24
2308 4357 6.398234 CTGGATTAGCTCTCTTTGCTACTA 57.602 41.667 0.00 0.00 41.95 1.82
2309 4358 5.275067 CTGGATTAGCTCTCTTTGCTACT 57.725 43.478 0.00 0.00 41.95 2.57
2346 4395 6.764877 TCTCACAAAATTGAAGAGTACGTC 57.235 37.500 14.88 0.00 36.25 4.34
2347 4396 7.730364 AATCTCACAAAATTGAAGAGTACGT 57.270 32.000 14.88 0.00 36.25 3.57
2383 4435 8.844244 GTGAATTATTGCACAATCTATCTTCCT 58.156 33.333 0.00 0.00 35.19 3.36
2414 4466 6.916360 ATAAGGTGTGTTTGGTGATTGATT 57.084 33.333 0.00 0.00 0.00 2.57
2430 4482 8.367911 TCAGCAACCTATAACTGATATAAGGTG 58.632 37.037 0.00 2.31 34.35 4.00
2436 4488 9.461312 TTTGTTTCAGCAACCTATAACTGATAT 57.539 29.630 0.00 0.00 38.84 1.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.