AutoCloner

Multiple sequence alignment - TraesCS7A01G242400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7A01G242400	chr7A	100.000	2833	0	0	1	2833	217690228	217687396	0.000000e+00	5232.0
1	TraesCS7A01G242400	chr7A	95.146	2802	81	19	1	2774	441745169	441747943	0.000000e+00	4370.0
2	TraesCS7A01G242400	chr2A	96.265	2811	58	9	1	2774	191974336	191977136	0.000000e+00	4566.0
3	TraesCS7A01G242400	chr2A	95.651	2805	79	12	4	2775	77762313	77759519	0.000000e+00	4464.0
4	TraesCS7A01G242400	chr2A	97.103	794	23	0	229	1022	752438711	752439504	0.000000e+00	1339.0
5	TraesCS7A01G242400	chr3A	95.798	2808	75	19	1	2774	601662542	601659744	0.000000e+00	4492.0
6	TraesCS7A01G242400	chr3A	95.826	2779	80	6	28	2778	738756405	738753635	0.000000e+00	4457.0
7	TraesCS7A01G242400	chr3A	94.804	2810	96	8	1	2774	484552346	484549551	0.000000e+00	4335.0
8	TraesCS7A01G242400	chr3A	97.524	727	14	2	2048	2774	601659026	601658304	0.000000e+00	1240.0
9	TraesCS7A01G242400	chr1A	95.970	2630	72	6	175	2774	13803378	13800753	0.000000e+00	4239.0
10	TraesCS7A01G242400	chr1A	95.257	2509	71	19	294	2774	406150855	406153343	0.000000e+00	3930.0
11	TraesCS7A01G242400	chr1A	97.749	311	5	2	1	309	406149105	406149415	4.150000e-148	534.0
12	TraesCS7A01G242400	chr1A	98.421	190	1	1	1	190	13803580	13803393	1.630000e-87	333.0
13	TraesCS7A01G242400	chr1A	96.721	61	2	0	2773	2833	503459320	503459380	4.990000e-18	102.0
14	TraesCS7A01G242400	chr1A	96.721	61	2	0	2773	2833	503585395	503585335	4.990000e-18	102.0
15	TraesCS7A01G242400	chr1B	90.671	2326	171	24	291	2584	179140929	179138618	0.000000e+00	3051.0
16	TraesCS7A01G242400	chr3D	91.056	1733	75	6	797	2476	418383500	418381795	0.000000e+00	2268.0
17	TraesCS7A01G242400	chr3D	96.721	61	2	0	2773	2833	351936703	351936643	4.990000e-18	102.0
18	TraesCS7A01G242400	chr2B	93.776	1189	64	2	751	1931	72935870	72937056	0.000000e+00	1777.0
19	TraesCS7A01G242400	chr6D	89.080	815	53	8	1807	2589	429978060	429977250	0.000000e+00	979.0
20	TraesCS7A01G242400	chr7B	88.599	307	15	5	1	287	554185108	554184802	3.470000e-94	355.0
21	TraesCS7A01G242400	chr2D	89.062	128	11	1	1807	1934	6722095	6721971	3.780000e-34	156.0
22	TraesCS7A01G242400	chr7D	96.721	61	2	0	2773	2833	116807588	116807528	4.990000e-18	102.0
23	TraesCS7A01G242400	chr7D	96.721	61	2	0	2773	2833	340201176	340201116	4.990000e-18	102.0
24	TraesCS7A01G242400	chr6B	96.721	61	2	0	2773	2833	246997743	246997803	4.990000e-18	102.0
25	TraesCS7A01G242400	chr4D	96.721	61	2	0	2773	2833	15088429	15088369	4.990000e-18	102.0
26	TraesCS7A01G242400	chr4D	96.721	61	2	0	2773	2833	417821684	417821624	4.990000e-18	102.0
27	TraesCS7A01G242400	chr1D	96.721	61	2	0	2773	2833	7100310	7100250	4.990000e-18	102.0
28	TraesCS7A01G242400	chr5B	96.491	57	2	0	175	231	684185705	684185649	8.360000e-16	95.3

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7A01G242400	chr7A	217687396	217690228	2832	True	5232	5232	100.0000	1	2833	1	chr7A.!!$R1	2832
1	TraesCS7A01G242400	chr7A	441745169	441747943	2774	False	4370	4370	95.1460	1	2774	1	chr7A.!!$F1	2773
2	TraesCS7A01G242400	chr2A	191974336	191977136	2800	False	4566	4566	96.2650	1	2774	1	chr2A.!!$F1	2773
3	TraesCS7A01G242400	chr2A	77759519	77762313	2794	True	4464	4464	95.6510	4	2775	1	chr2A.!!$R1	2771
4	TraesCS7A01G242400	chr2A	752438711	752439504	793	False	1339	1339	97.1030	229	1022	1	chr2A.!!$F2	793
5	TraesCS7A01G242400	chr3A	738753635	738756405	2770	True	4457	4457	95.8260	28	2778	1	chr3A.!!$R2	2750
6	TraesCS7A01G242400	chr3A	484549551	484552346	2795	True	4335	4335	94.8040	1	2774	1	chr3A.!!$R1	2773
7	TraesCS7A01G242400	chr3A	601658304	601662542	4238	True	2866	4492	96.6610	1	2774	2	chr3A.!!$R3	2773
8	TraesCS7A01G242400	chr1A	13800753	13803580	2827	True	2286	4239	97.1955	1	2774	2	chr1A.!!$R2	2773
9	TraesCS7A01G242400	chr1A	406149105	406153343	4238	False	2232	3930	96.5030	1	2774	2	chr1A.!!$F2	2773
10	TraesCS7A01G242400	chr1B	179138618	179140929	2311	True	3051	3051	90.6710	291	2584	1	chr1B.!!$R1	2293
11	TraesCS7A01G242400	chr3D	418381795	418383500	1705	True	2268	2268	91.0560	797	2476	1	chr3D.!!$R2	1679
12	TraesCS7A01G242400	chr2B	72935870	72937056	1186	False	1777	1777	93.7760	751	1931	1	chr2B.!!$F1	1180
13	TraesCS7A01G242400	chr6D	429977250	429978060	810	True	979	979	89.0800	1807	2589	1	chr6D.!!$R1	782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
421	1918	0.911769	TGGCTCCATTCCACGAGATT	59.088	50.0	0.0	0.0	0.0	2.40	F
1054	2561	0.893447	GCCCAACTACTACCACGACT	59.107	55.0	0.0	0.0	0.0	4.18	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1626	3143	1.074405	TCTGAAAGGCAGCATCCACTT	59.926	47.619	0.0	0.0	44.52	3.16	R
2789	5798	1.234821	TGCGGCAAAGAAATTCTCGT	58.765	45.000	0.0	0.0	0.00	4.18	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
26	27	9.420118	GTATGAGACCATAATCCATCTATCTCT	57.580	37.037	0.00	0.00	37.04	3.10
112	117	8.962884	AGGGAATTAATTTCATGTAAATTGGC	57.037	30.769	18.30	9.63	45.35	4.52
322	1819	1.078848	GCTTGAGTCCATGTCCGCT	60.079	57.895	0.00	0.00	0.00	5.52
421	1918	0.911769	TGGCTCCATTCCACGAGATT	59.088	50.000	0.00	0.00	0.00	2.40
467	1964	1.628846	AGGAGTAGCATTTCCACCGTT	59.371	47.619	3.66	0.00	35.88	4.44
950	2449	2.218953	TTCGAGTGTTTTCGTCTGCT	57.781	45.000	0.00	0.00	41.22	4.24
994	2501	2.525368	TCAGAATTCAGTCAGTCGGGA	58.475	47.619	8.44	0.00	0.00	5.14
1054	2561	0.893447	GCCCAACTACTACCACGACT	59.107	55.000	0.00	0.00	0.00	4.18
1348	2862	1.421646	CTCCAACACCTTCCTGACCTT	59.578	52.381	0.00	0.00	0.00	3.50
1416	2930	1.672356	CCTGTGTCCTTTGAGGCGG	60.672	63.158	0.00	0.00	34.61	6.13
1420	2934	2.144078	TGTCCTTTGAGGCGGTGGA	61.144	57.895	0.00	0.00	34.61	4.02
1479	2993	1.340114	CCTACTGGTCCTGGAAAAGCC	60.340	57.143	0.00	0.00	37.10	4.35
1531	3048	4.135153	CTCCTACGCGCTGCACCT	62.135	66.667	5.73	0.00	0.00	4.00
1562	3079	1.209128	CCATATTCGTGTCCTCGTGC	58.791	55.000	0.00	0.00	0.00	5.34
1606	3123	2.044555	CCGTCGACACCAGGAGCTA	61.045	63.158	17.16	0.00	0.00	3.32
1663	3180	0.905337	AGAGGCCGAGGCTACTTTGT	60.905	55.000	14.33	0.00	38.98	2.83
1667	3184	1.215647	CCGAGGCTACTTTGTCGCT	59.784	57.895	0.00	0.00	0.00	4.93
2010	3571	4.354893	TGGTACCGTGTACAAAAATCCT	57.645	40.909	7.57	0.00	0.00	3.24
2255	4540	1.530323	GTTTATGTGGGCGGTGAAGT	58.470	50.000	0.00	0.00	0.00	3.01
2374	4660	5.697082	TTACCATCCGTTAGTTGGGTTAT	57.303	39.130	0.00	0.00	34.72	1.89
2521	5528	4.202631	TGGGAGCAGGTACCAAATAAAACT	60.203	41.667	15.94	0.00	0.00	2.66
2679	5688	4.316823	TGAGCGGGAGGTGGGAGT	62.317	66.667	0.00	0.00	43.00	3.85
2778	5787	8.774546	TGAGACATTAGGAGTAGAGATGATTT	57.225	34.615	0.00	0.00	0.00	2.17
2779	5788	9.206690	TGAGACATTAGGAGTAGAGATGATTTT	57.793	33.333	0.00	0.00	0.00	1.82
2781	5790	9.829507	AGACATTAGGAGTAGAGATGATTTTTG	57.170	33.333	0.00	0.00	0.00	2.44
2782	5791	8.443953	ACATTAGGAGTAGAGATGATTTTTGC	57.556	34.615	0.00	0.00	0.00	3.68
2783	5792	8.049117	ACATTAGGAGTAGAGATGATTTTTGCA	58.951	33.333	0.00	0.00	0.00	4.08
2784	5793	8.896744	CATTAGGAGTAGAGATGATTTTTGCAA	58.103	33.333	0.00	0.00	0.00	4.08
2785	5794	6.749923	AGGAGTAGAGATGATTTTTGCAAC	57.250	37.500	0.00	0.00	0.00	4.17
2786	5795	6.479884	AGGAGTAGAGATGATTTTTGCAACT	58.520	36.000	0.00	0.00	0.00	3.16
2787	5796	6.373774	AGGAGTAGAGATGATTTTTGCAACTG	59.626	38.462	0.00	0.00	0.00	3.16
2788	5797	6.150140	GGAGTAGAGATGATTTTTGCAACTGT	59.850	38.462	0.00	0.00	0.00	3.55
2789	5798	7.334421	GGAGTAGAGATGATTTTTGCAACTGTA	59.666	37.037	0.00	0.00	0.00	2.74
2790	5799	8.034058	AGTAGAGATGATTTTTGCAACTGTAC	57.966	34.615	0.00	4.47	36.10	2.90
2791	5800	5.931532	AGAGATGATTTTTGCAACTGTACG	58.068	37.500	0.00	0.00	0.00	3.67
2792	5801	5.700832	AGAGATGATTTTTGCAACTGTACGA	59.299	36.000	0.00	0.00	0.00	3.43
2793	5802	5.931532	AGATGATTTTTGCAACTGTACGAG	58.068	37.500	0.00	0.00	0.00	4.18
2794	5803	5.700832	AGATGATTTTTGCAACTGTACGAGA	59.299	36.000	0.00	0.00	0.00	4.04
2795	5804	5.743026	TGATTTTTGCAACTGTACGAGAA	57.257	34.783	0.00	0.00	0.00	2.87
2796	5805	6.312399	TGATTTTTGCAACTGTACGAGAAT	57.688	33.333	0.00	0.00	0.00	2.40
2797	5806	6.734137	TGATTTTTGCAACTGTACGAGAATT	58.266	32.000	0.00	0.00	0.00	2.17
2798	5807	7.199766	TGATTTTTGCAACTGTACGAGAATTT	58.800	30.769	0.00	0.00	0.00	1.82
2799	5808	7.378461	TGATTTTTGCAACTGTACGAGAATTTC	59.622	33.333	0.00	0.00	0.00	2.17
2800	5809	6.371809	TTTTGCAACTGTACGAGAATTTCT	57.628	33.333	0.00	0.00	0.00	2.52
2801	5810	6.371809	TTTGCAACTGTACGAGAATTTCTT	57.628	33.333	0.00	0.00	0.00	2.52
2802	5811	6.371809	TTGCAACTGTACGAGAATTTCTTT	57.628	33.333	0.00	0.00	0.00	2.52
2803	5812	5.747565	TGCAACTGTACGAGAATTTCTTTG	58.252	37.500	0.00	0.97	0.00	2.77
2804	5813	4.613031	GCAACTGTACGAGAATTTCTTTGC	59.387	41.667	11.73	11.73	0.00	3.68
2805	5814	5.147162	CAACTGTACGAGAATTTCTTTGCC	58.853	41.667	0.00	0.00	0.00	4.52
2806	5815	3.432252	ACTGTACGAGAATTTCTTTGCCG	59.568	43.478	0.00	2.30	0.00	5.69
2807	5816	2.158841	TGTACGAGAATTTCTTTGCCGC	59.841	45.455	0.00	0.00	0.00	6.53
2808	5817	1.234821	ACGAGAATTTCTTTGCCGCA	58.765	45.000	0.00	0.00	0.00	5.69
2809	5818	1.812571	ACGAGAATTTCTTTGCCGCAT	59.187	42.857	0.00	0.00	0.00	4.73
2810	5819	2.159517	ACGAGAATTTCTTTGCCGCATC	60.160	45.455	0.00	0.00	0.00	3.91
2811	5820	2.159531	CGAGAATTTCTTTGCCGCATCA	60.160	45.455	0.00	0.00	0.00	3.07
2812	5821	3.174375	GAGAATTTCTTTGCCGCATCAC	58.826	45.455	0.00	0.00	0.00	3.06
2813	5822	2.557924	AGAATTTCTTTGCCGCATCACA	59.442	40.909	0.00	0.00	0.00	3.58
2814	5823	3.005684	AGAATTTCTTTGCCGCATCACAA	59.994	39.130	0.00	0.00	0.00	3.33
2815	5824	2.420628	TTTCTTTGCCGCATCACAAG	57.579	45.000	0.00	0.00	0.00	3.16
2816	5825	1.603456	TTCTTTGCCGCATCACAAGA	58.397	45.000	0.00	0.00	0.00	3.02
2817	5826	1.603456	TCTTTGCCGCATCACAAGAA	58.397	45.000	3.26	0.00	0.00	2.52
2818	5827	1.952990	TCTTTGCCGCATCACAAGAAA	59.047	42.857	3.26	0.00	0.00	2.52
2819	5828	2.360483	TCTTTGCCGCATCACAAGAAAA	59.640	40.909	3.26	0.00	0.00	2.29
2820	5829	2.879002	TTGCCGCATCACAAGAAAAA	57.121	40.000	0.00	0.00	0.00	1.94
2821	5830	2.132740	TGCCGCATCACAAGAAAAAC	57.867	45.000	0.00	0.00	0.00	2.43
2822	5831	1.406898	TGCCGCATCACAAGAAAAACA	59.593	42.857	0.00	0.00	0.00	2.83
2823	5832	2.053627	GCCGCATCACAAGAAAAACAG	58.946	47.619	0.00	0.00	0.00	3.16
2824	5833	2.543653	GCCGCATCACAAGAAAAACAGT	60.544	45.455	0.00	0.00	0.00	3.55
2825	5834	3.705604	CCGCATCACAAGAAAAACAGTT	58.294	40.909	0.00	0.00	0.00	3.16
2826	5835	4.111916	CCGCATCACAAGAAAAACAGTTT	58.888	39.130	0.00	0.00	0.00	2.66
2827	5836	4.026640	CCGCATCACAAGAAAAACAGTTTG	60.027	41.667	0.00	0.00	0.00	2.93
2828	5837	4.797868	CGCATCACAAGAAAAACAGTTTGA	59.202	37.500	0.00	0.00	0.00	2.69
2829	5838	5.288232	CGCATCACAAGAAAAACAGTTTGAA	59.712	36.000	0.00	0.00	0.00	2.69
2830	5839	6.183360	CGCATCACAAGAAAAACAGTTTGAAA	60.183	34.615	0.00	0.00	0.00	2.69
2831	5840	6.955407	GCATCACAAGAAAAACAGTTTGAAAC	59.045	34.615	0.00	0.00	0.00	2.78
2832	5841	7.359933	GCATCACAAGAAAAACAGTTTGAAACA	60.360	33.333	11.02	0.00	0.00	2.83

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
26	27	0.033366	ATGCACTAGCGTGTGTGTGA	59.967	50.000	12.36	0.00	46.23	3.58
112	117	3.051210	TCACGGAGCTGTGACTGG	58.949	61.111	8.01	0.00	43.62	4.00
227	269	3.035363	TGAGGAGTGTGGTGTTCTACAA	58.965	45.455	0.00	0.00	36.84	2.41
421	1918	5.052481	CCGAACTCTATGATGCTTGATTCA	58.948	41.667	0.00	0.00	0.00	2.57
501	1998	3.367292	GGTATTTACGTTCCGTGTCCTCA	60.367	47.826	0.00	0.00	41.39	3.86
950	2449	9.926158	TGAAGTATATACCAGAAAAACACGTAA	57.074	29.630	9.32	0.00	0.00	3.18
994	2501	1.555075	TCTTTGCTTAGACATCCCGCT	59.445	47.619	0.00	0.00	0.00	5.52
1064	2571	2.965147	AGATAGAGGCTCTTCTCCTTGC	59.035	50.000	24.13	3.73	33.24	4.01
1531	3048	2.933878	GAATATGGTGCGCCCGTCCA	62.934	60.000	15.15	9.11	35.15	4.02
1626	3143	1.074405	TCTGAAAGGCAGCATCCACTT	59.926	47.619	0.00	0.00	44.52	3.16
2010	3571	9.175312	TGCCGGTATATTTTACTTGTTTTGATA	57.825	29.630	1.90	0.00	0.00	2.15
2125	4407	8.940768	TTTCTTATCATGAATCATACACGTCA	57.059	30.769	0.00	0.00	0.00	4.35
2255	4540	1.638589	CCCCTCCCACATACCTTTTCA	59.361	52.381	0.00	0.00	0.00	2.69
2374	4660	9.246670	ACATATGGTGATTGATTTCTTCTTTGA	57.753	29.630	7.80	0.00	0.00	2.69
2480	5487	1.616159	CACCTCCCAATTTTGTCGGT	58.384	50.000	0.00	0.00	0.00	4.69
2521	5528	5.954153	TTATTTTCGTCCCACCTACCATA	57.046	39.130	0.00	0.00	0.00	2.74
2778	5787	6.371809	AAGAAATTCTCGTACAGTTGCAAA	57.628	33.333	0.00	0.00	0.00	3.68
2779	5788	6.198687	CAAAGAAATTCTCGTACAGTTGCAA	58.801	36.000	0.00	0.00	0.00	4.08
2780	5789	5.747565	CAAAGAAATTCTCGTACAGTTGCA	58.252	37.500	0.00	0.00	0.00	4.08
2781	5790	4.613031	GCAAAGAAATTCTCGTACAGTTGC	59.387	41.667	9.57	9.57	0.00	4.17
2782	5791	5.147162	GGCAAAGAAATTCTCGTACAGTTG	58.853	41.667	0.00	0.00	0.00	3.16
2783	5792	4.084013	CGGCAAAGAAATTCTCGTACAGTT	60.084	41.667	0.00	0.00	0.00	3.16
2784	5793	3.432252	CGGCAAAGAAATTCTCGTACAGT	59.568	43.478	0.00	0.00	0.00	3.55
2785	5794	3.725010	GCGGCAAAGAAATTCTCGTACAG	60.725	47.826	0.00	0.00	0.00	2.74
2786	5795	2.158841	GCGGCAAAGAAATTCTCGTACA	59.841	45.455	0.00	0.00	0.00	2.90
2787	5796	2.158841	TGCGGCAAAGAAATTCTCGTAC	59.841	45.455	0.00	0.00	0.00	3.67
2788	5797	2.418692	TGCGGCAAAGAAATTCTCGTA	58.581	42.857	0.00	0.00	0.00	3.43
2789	5798	1.234821	TGCGGCAAAGAAATTCTCGT	58.765	45.000	0.00	0.00	0.00	4.18
2790	5799	2.159531	TGATGCGGCAAAGAAATTCTCG	60.160	45.455	6.82	0.00	0.00	4.04
2791	5800	3.174375	GTGATGCGGCAAAGAAATTCTC	58.826	45.455	6.82	0.00	0.00	2.87
2792	5801	2.557924	TGTGATGCGGCAAAGAAATTCT	59.442	40.909	6.82	0.00	0.00	2.40
2793	5802	2.945278	TGTGATGCGGCAAAGAAATTC	58.055	42.857	6.82	0.00	0.00	2.17
2794	5803	3.005684	TCTTGTGATGCGGCAAAGAAATT	59.994	39.130	6.82	0.00	0.00	1.82
2795	5804	2.557924	TCTTGTGATGCGGCAAAGAAAT	59.442	40.909	6.82	0.00	0.00	2.17
2796	5805	1.952990	TCTTGTGATGCGGCAAAGAAA	59.047	42.857	6.82	0.00	0.00	2.52
2797	5806	1.603456	TCTTGTGATGCGGCAAAGAA	58.397	45.000	6.82	2.55	0.00	2.52
2798	5807	1.603456	TTCTTGTGATGCGGCAAAGA	58.397	45.000	6.82	8.81	0.00	2.52
2799	5808	2.420628	TTTCTTGTGATGCGGCAAAG	57.579	45.000	6.82	6.26	0.00	2.77
2800	5809	2.863137	GTTTTTCTTGTGATGCGGCAAA	59.137	40.909	6.82	0.00	0.00	3.68
2801	5810	2.159184	TGTTTTTCTTGTGATGCGGCAA	60.159	40.909	6.82	0.00	0.00	4.52
2802	5811	1.406898	TGTTTTTCTTGTGATGCGGCA	59.593	42.857	4.58	4.58	0.00	5.69
2803	5812	2.053627	CTGTTTTTCTTGTGATGCGGC	58.946	47.619	0.00	0.00	0.00	6.53
2804	5813	3.354089	ACTGTTTTTCTTGTGATGCGG	57.646	42.857	0.00	0.00	0.00	5.69
2805	5814	4.797868	TCAAACTGTTTTTCTTGTGATGCG	59.202	37.500	2.41	0.00	0.00	4.73
2806	5815	6.645700	TTCAAACTGTTTTTCTTGTGATGC	57.354	33.333	2.41	0.00	0.00	3.91
2807	5816	8.016497	TGTTTCAAACTGTTTTTCTTGTGATG	57.984	30.769	2.41	0.00	0.00	3.07

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.