Multiple sequence alignment - TraesCS7A01G239100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G239100 chr7A 100.000 5629 0 0 1 5629 211806933 211812561 0.000000e+00 10395.0
1 TraesCS7A01G239100 chr7D 93.500 4046 186 34 812 4822 199914230 199918233 0.000000e+00 5943.0
2 TraesCS7A01G239100 chr7D 89.503 543 29 18 5093 5629 199918724 199919244 0.000000e+00 662.0
3 TraesCS7A01G239100 chr7D 89.792 480 16 11 173 633 199888542 199889007 8.130000e-163 584.0
4 TraesCS7A01G239100 chr7D 94.972 179 8 1 634 812 199914006 199914183 4.290000e-71 279.0
5 TraesCS7A01G239100 chr7D 93.122 189 7 5 1 183 359684988 359684800 7.190000e-69 272.0
6 TraesCS7A01G239100 chr7B 94.156 3696 160 29 1289 4965 164974277 164977935 0.000000e+00 5578.0
7 TraesCS7A01G239100 chr7B 89.796 784 45 11 948 1702 164973907 164974684 0.000000e+00 972.0
8 TraesCS7A01G239100 chr7B 88.889 567 36 12 5080 5629 164978144 164978700 0.000000e+00 673.0
9 TraesCS7A01G239100 chr7B 87.625 501 19 15 164 639 164965958 164966440 4.960000e-150 542.0
10 TraesCS7A01G239100 chr7B 96.111 180 4 3 1 178 606394945 606395123 1.980000e-74 291.0
11 TraesCS7A01G239100 chr7B 97.041 169 4 1 1 168 411545935 411546103 3.320000e-72 283.0
12 TraesCS7A01G239100 chr7B 84.109 258 18 15 635 874 164973344 164973596 1.580000e-55 228.0
13 TraesCS7A01G239100 chr5A 80.475 589 111 4 3535 4121 471916749 471917335 1.110000e-121 448.0
14 TraesCS7A01G239100 chr5A 92.308 52 4 0 2140 2191 56731889 56731838 2.180000e-09 75.0
15 TraesCS7A01G239100 chr5B 80.306 589 112 4 3535 4121 438220048 438220634 5.180000e-120 442.0
16 TraesCS7A01G239100 chr5B 97.024 168 4 1 1 167 709818436 709818603 1.190000e-71 281.0
17 TraesCS7A01G239100 chr5B 95.833 48 2 0 2140 2187 568409721 568409768 1.680000e-10 78.7
18 TraesCS7A01G239100 chr5D 80.000 580 113 3 3535 4113 369388712 369389289 5.210000e-115 425.0
19 TraesCS7A01G239100 chr2B 97.619 168 3 1 1 167 87420604 87420771 2.570000e-73 287.0
20 TraesCS7A01G239100 chr2B 96.429 168 5 1 1 167 52914311 52914478 5.560000e-70 276.0
21 TraesCS7A01G239100 chr3A 96.532 173 4 2 1 171 487442798 487442970 9.230000e-73 285.0
22 TraesCS7A01G239100 chr3A 80.488 123 17 7 695 814 38263023 38263141 2.790000e-13 87.9
23 TraesCS7A01G239100 chrUn 97.024 168 4 1 1 167 311485985 311486152 1.190000e-71 281.0
24 TraesCS7A01G239100 chr3B 94.413 179 9 1 1 178 447657187 447657009 2.000000e-69 274.0
25 TraesCS7A01G239100 chr3B 83.898 118 14 5 700 815 50347620 50347506 2.140000e-19 108.0
26 TraesCS7A01G239100 chr3B 90.909 55 5 0 2140 2194 156568620 156568566 2.180000e-09 75.0
27 TraesCS7A01G239100 chr6D 96.000 50 2 0 2140 2189 84938497 84938546 1.300000e-11 82.4
28 TraesCS7A01G239100 chr6D 95.745 47 2 0 2140 2186 84938504 84938458 6.050000e-10 76.8
29 TraesCS7A01G239100 chr2D 86.765 68 7 2 2140 2206 79088024 79088090 2.180000e-09 75.0
30 TraesCS7A01G239100 chr6A 90.909 55 4 1 2140 2193 446759379 446759433 7.820000e-09 73.1
31 TraesCS7A01G239100 chr4A 100.000 39 0 0 3801 3839 161172148 161172110 7.820000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G239100 chr7A 211806933 211812561 5628 False 10395.000000 10395 100.000000 1 5629 1 chr7A.!!$F1 5628
1 TraesCS7A01G239100 chr7D 199914006 199919244 5238 False 2294.666667 5943 92.658333 634 5629 3 chr7D.!!$F2 4995
2 TraesCS7A01G239100 chr7B 164973344 164978700 5356 False 1862.750000 5578 89.237500 635 5629 4 chr7B.!!$F4 4994
3 TraesCS7A01G239100 chr5A 471916749 471917335 586 False 448.000000 448 80.475000 3535 4121 1 chr5A.!!$F1 586
4 TraesCS7A01G239100 chr5B 438220048 438220634 586 False 442.000000 442 80.306000 3535 4121 1 chr5B.!!$F1 586
5 TraesCS7A01G239100 chr5D 369388712 369389289 577 False 425.000000 425 80.000000 3535 4113 1 chr5D.!!$F1 578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 247 0.162933 GACCACGTAACATGTGCACG 59.837 55.000 24.07 24.07 41.32 5.34 F
1284 1598 0.038618 GCCGCGTTTGGGAATTTCTT 60.039 50.000 4.92 0.00 0.00 2.52 F
1562 1908 1.077501 CAATGTGGGCGATCAGGGT 60.078 57.895 0.00 0.00 0.00 4.34 F
3106 3457 1.521450 ATGACAACTGTGCAGCTGCC 61.521 55.000 34.64 25.13 41.18 4.85 F
3229 3580 1.446907 AGAGGCTTCATTGTCTTGCG 58.553 50.000 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1522 1868 0.037882 CGCTCCTGTATCCGATGCAT 60.038 55.0 0.00 0.00 0.00 3.96 R
3091 3442 0.666274 CAATGGCAGCTGCACAGTTG 60.666 55.0 37.63 28.24 44.36 3.16 R
3229 3580 0.804989 ACTCATTTGTAAGCCGCAGC 59.195 50.0 0.00 0.00 40.32 5.25 R
4009 4363 0.516877 CACATGCACGTCGGTCAAAT 59.483 50.0 0.00 0.00 0.00 2.32 R
5181 5870 0.167908 TTGCAGATTAAACCAGCGCG 59.832 50.0 0.00 0.00 0.00 6.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 6.764877 ATATTTAGAAACTACATCCGCGTG 57.235 37.500 4.92 0.00 0.00 5.34
64 65 3.853831 TTAGAAACTACATCCGCGTGA 57.146 42.857 4.92 1.95 0.00 4.35
65 66 2.736144 AGAAACTACATCCGCGTGAA 57.264 45.000 4.92 0.00 0.00 3.18
66 67 3.034721 AGAAACTACATCCGCGTGAAA 57.965 42.857 4.92 0.00 0.00 2.69
67 68 3.395639 AGAAACTACATCCGCGTGAAAA 58.604 40.909 4.92 0.00 0.00 2.29
68 69 4.000988 AGAAACTACATCCGCGTGAAAAT 58.999 39.130 4.92 0.00 0.00 1.82
69 70 4.092968 AGAAACTACATCCGCGTGAAAATC 59.907 41.667 4.92 0.00 0.00 2.17
70 71 3.247006 ACTACATCCGCGTGAAAATCT 57.753 42.857 4.92 0.00 0.00 2.40
71 72 4.380841 ACTACATCCGCGTGAAAATCTA 57.619 40.909 4.92 0.00 0.00 1.98
72 73 4.110482 ACTACATCCGCGTGAAAATCTAC 58.890 43.478 4.92 0.00 0.00 2.59
73 74 3.247006 ACATCCGCGTGAAAATCTACT 57.753 42.857 4.92 0.00 0.00 2.57
74 75 2.930040 ACATCCGCGTGAAAATCTACTG 59.070 45.455 4.92 0.00 0.00 2.74
75 76 3.186909 CATCCGCGTGAAAATCTACTGA 58.813 45.455 4.92 0.00 0.00 3.41
76 77 3.520290 TCCGCGTGAAAATCTACTGAT 57.480 42.857 4.92 0.00 33.70 2.90
77 78 4.642445 TCCGCGTGAAAATCTACTGATA 57.358 40.909 4.92 0.00 31.70 2.15
78 79 5.196341 TCCGCGTGAAAATCTACTGATAT 57.804 39.130 4.92 0.00 31.70 1.63
79 80 6.321848 TCCGCGTGAAAATCTACTGATATA 57.678 37.500 4.92 0.00 31.70 0.86
80 81 6.147581 TCCGCGTGAAAATCTACTGATATAC 58.852 40.000 4.92 0.00 31.70 1.47
81 82 6.016527 TCCGCGTGAAAATCTACTGATATACT 60.017 38.462 4.92 0.00 31.70 2.12
82 83 6.641314 CCGCGTGAAAATCTACTGATATACTT 59.359 38.462 4.92 0.00 31.70 2.24
83 84 7.169308 CCGCGTGAAAATCTACTGATATACTTT 59.831 37.037 4.92 0.00 31.70 2.66
84 85 8.540492 CGCGTGAAAATCTACTGATATACTTTT 58.460 33.333 0.00 0.00 31.70 2.27
85 86 9.851043 GCGTGAAAATCTACTGATATACTTTTC 57.149 33.333 0.00 0.00 30.78 2.29
122 123 9.559732 ACACATATTTAATTCCTCAATCGATGA 57.440 29.630 0.00 0.00 36.38 2.92
123 124 9.817365 CACATATTTAATTCCTCAATCGATGAC 57.183 33.333 0.00 0.00 33.47 3.06
124 125 9.003658 ACATATTTAATTCCTCAATCGATGACC 57.996 33.333 0.00 0.00 33.47 4.02
125 126 9.224267 CATATTTAATTCCTCAATCGATGACCT 57.776 33.333 0.00 0.00 33.47 3.85
127 128 8.839310 ATTTAATTCCTCAATCGATGACCTAG 57.161 34.615 0.00 0.00 33.47 3.02
128 129 7.597288 TTAATTCCTCAATCGATGACCTAGA 57.403 36.000 0.00 0.00 33.47 2.43
129 130 6.485830 AATTCCTCAATCGATGACCTAGAA 57.514 37.500 0.00 0.00 33.47 2.10
130 131 4.920640 TCCTCAATCGATGACCTAGAAC 57.079 45.455 0.00 0.00 33.47 3.01
131 132 4.537751 TCCTCAATCGATGACCTAGAACT 58.462 43.478 0.00 0.00 33.47 3.01
132 133 5.691896 TCCTCAATCGATGACCTAGAACTA 58.308 41.667 0.00 0.00 33.47 2.24
133 134 5.531659 TCCTCAATCGATGACCTAGAACTAC 59.468 44.000 0.00 0.00 33.47 2.73
134 135 5.419760 TCAATCGATGACCTAGAACTACG 57.580 43.478 0.00 0.00 31.50 3.51
135 136 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
136 137 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
137 138 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
138 139 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
139 140 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
140 141 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
141 142 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
142 143 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
143 144 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
144 145 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
145 146 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
146 147 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
147 148 6.484643 ACCTAGAACTACGCGAATGACTTATA 59.515 38.462 15.93 0.00 0.00 0.98
148 149 6.796072 CCTAGAACTACGCGAATGACTTATAC 59.204 42.308 15.93 0.00 0.00 1.47
149 150 6.127810 AGAACTACGCGAATGACTTATACA 57.872 37.500 15.93 0.00 0.00 2.29
150 151 5.970023 AGAACTACGCGAATGACTTATACAC 59.030 40.000 15.93 0.00 0.00 2.90
151 152 4.604976 ACTACGCGAATGACTTATACACC 58.395 43.478 15.93 0.00 0.00 4.16
152 153 2.817901 ACGCGAATGACTTATACACCC 58.182 47.619 15.93 0.00 0.00 4.61
153 154 1.784856 CGCGAATGACTTATACACCCG 59.215 52.381 0.00 0.00 0.00 5.28
154 155 2.132762 GCGAATGACTTATACACCCGG 58.867 52.381 0.00 0.00 0.00 5.73
155 156 2.223876 GCGAATGACTTATACACCCGGA 60.224 50.000 0.73 0.00 0.00 5.14
156 157 3.378339 CGAATGACTTATACACCCGGAC 58.622 50.000 0.73 0.00 0.00 4.79
157 158 3.181484 CGAATGACTTATACACCCGGACA 60.181 47.826 0.73 0.00 0.00 4.02
158 159 4.678574 CGAATGACTTATACACCCGGACAA 60.679 45.833 0.73 0.00 0.00 3.18
159 160 4.829872 ATGACTTATACACCCGGACAAA 57.170 40.909 0.73 0.00 0.00 2.83
160 161 4.196626 TGACTTATACACCCGGACAAAG 57.803 45.455 0.73 0.00 0.00 2.77
161 162 3.055675 TGACTTATACACCCGGACAAAGG 60.056 47.826 0.73 0.00 0.00 3.11
173 174 4.840271 CCGGACAAAGGGAGTAATTAAGT 58.160 43.478 0.00 0.00 0.00 2.24
174 175 5.250982 CCGGACAAAGGGAGTAATTAAGTT 58.749 41.667 0.00 0.00 0.00 2.66
175 176 5.708697 CCGGACAAAGGGAGTAATTAAGTTT 59.291 40.000 0.00 0.00 0.00 2.66
176 177 6.128090 CCGGACAAAGGGAGTAATTAAGTTTC 60.128 42.308 0.00 0.00 0.00 2.78
177 178 6.653740 CGGACAAAGGGAGTAATTAAGTTTCT 59.346 38.462 0.00 0.00 0.00 2.52
178 179 7.148457 CGGACAAAGGGAGTAATTAAGTTTCTC 60.148 40.741 0.00 0.00 34.51 2.87
179 180 7.883833 GGACAAAGGGAGTAATTAAGTTTCTCT 59.116 37.037 7.40 0.00 35.33 3.10
180 181 9.939802 GACAAAGGGAGTAATTAAGTTTCTCTA 57.060 33.333 7.40 0.00 35.33 2.43
181 182 9.945904 ACAAAGGGAGTAATTAAGTTTCTCTAG 57.054 33.333 7.40 0.00 35.33 2.43
185 186 9.716556 AGGGAGTAATTAAGTTTCTCTAGATGA 57.283 33.333 0.00 0.00 35.33 2.92
194 195 6.100404 AGTTTCTCTAGATGATGATGAGGC 57.900 41.667 0.00 0.00 0.00 4.70
195 196 4.780275 TTCTCTAGATGATGATGAGGCG 57.220 45.455 0.00 0.00 0.00 5.52
196 197 2.491298 TCTCTAGATGATGATGAGGCGC 59.509 50.000 0.00 0.00 0.00 6.53
197 198 1.547820 TCTAGATGATGATGAGGCGCC 59.452 52.381 21.89 21.89 0.00 6.53
198 199 0.244721 TAGATGATGATGAGGCGCCG 59.755 55.000 23.20 0.00 0.00 6.46
199 200 2.031516 GATGATGATGAGGCGCCGG 61.032 63.158 23.20 0.00 0.00 6.13
200 201 2.721971 GATGATGATGAGGCGCCGGT 62.722 60.000 23.20 11.29 0.00 5.28
201 202 2.969238 GATGATGAGGCGCCGGTG 60.969 66.667 23.20 11.67 0.00 4.94
202 203 3.445518 GATGATGAGGCGCCGGTGA 62.446 63.158 23.20 5.48 0.00 4.02
203 204 3.451556 ATGATGAGGCGCCGGTGAG 62.452 63.158 23.20 4.02 0.00 3.51
204 205 4.148825 GATGAGGCGCCGGTGAGT 62.149 66.667 23.20 0.68 0.00 3.41
205 206 2.758327 ATGAGGCGCCGGTGAGTA 60.758 61.111 23.20 3.68 0.00 2.59
206 207 2.685387 GATGAGGCGCCGGTGAGTAG 62.685 65.000 23.20 0.00 0.00 2.57
207 208 3.450115 GAGGCGCCGGTGAGTAGT 61.450 66.667 23.20 0.00 0.00 2.73
208 209 3.412879 GAGGCGCCGGTGAGTAGTC 62.413 68.421 23.20 5.69 0.00 2.59
209 210 4.849329 GGCGCCGGTGAGTAGTCG 62.849 72.222 21.76 4.03 0.00 4.18
210 211 4.112341 GCGCCGGTGAGTAGTCGT 62.112 66.667 21.76 0.00 0.00 4.34
211 212 2.564975 CGCCGGTGAGTAGTCGTT 59.435 61.111 10.20 0.00 0.00 3.85
212 213 1.800315 CGCCGGTGAGTAGTCGTTG 60.800 63.158 10.20 0.00 0.00 4.10
213 214 2.092882 GCCGGTGAGTAGTCGTTGC 61.093 63.158 1.90 0.00 0.00 4.17
214 215 1.800315 CCGGTGAGTAGTCGTTGCG 60.800 63.158 0.00 0.00 0.00 4.85
215 216 1.081641 CGGTGAGTAGTCGTTGCGT 60.082 57.895 0.00 0.00 0.00 5.24
216 217 0.662374 CGGTGAGTAGTCGTTGCGTT 60.662 55.000 0.00 0.00 0.00 4.84
217 218 1.494824 GGTGAGTAGTCGTTGCGTTT 58.505 50.000 0.00 0.00 0.00 3.60
218 219 2.664916 GGTGAGTAGTCGTTGCGTTTA 58.335 47.619 0.00 0.00 0.00 2.01
219 220 2.660236 GGTGAGTAGTCGTTGCGTTTAG 59.340 50.000 0.00 0.00 0.00 1.85
230 231 2.818274 CGTTTAGCAGGCCGGACC 60.818 66.667 1.76 4.96 39.61 4.46
231 232 2.349755 GTTTAGCAGGCCGGACCA 59.650 61.111 1.76 0.00 43.14 4.02
232 233 2.038837 GTTTAGCAGGCCGGACCAC 61.039 63.158 1.76 0.00 43.14 4.16
233 234 3.599285 TTTAGCAGGCCGGACCACG 62.599 63.158 1.76 1.67 43.14 4.94
235 236 3.942377 TAGCAGGCCGGACCACGTA 62.942 63.158 1.76 0.00 43.14 3.57
236 237 4.382320 GCAGGCCGGACCACGTAA 62.382 66.667 1.76 0.00 43.14 3.18
237 238 2.433664 CAGGCCGGACCACGTAAC 60.434 66.667 1.76 0.00 43.14 2.50
238 239 2.918802 AGGCCGGACCACGTAACA 60.919 61.111 1.76 0.00 43.14 2.41
239 240 2.266689 GGCCGGACCACGTAACAT 59.733 61.111 5.05 0.00 42.24 2.71
240 241 2.104253 GGCCGGACCACGTAACATG 61.104 63.158 5.05 0.00 42.24 3.21
241 242 1.375013 GCCGGACCACGTAACATGT 60.375 57.895 5.05 0.00 42.24 3.21
242 243 1.632046 GCCGGACCACGTAACATGTG 61.632 60.000 5.05 0.00 42.24 3.21
243 244 1.632046 CCGGACCACGTAACATGTGC 61.632 60.000 0.00 0.00 42.24 4.57
244 245 0.946700 CGGACCACGTAACATGTGCA 60.947 55.000 0.00 0.00 33.88 4.57
245 246 0.515564 GGACCACGTAACATGTGCAC 59.484 55.000 10.75 10.75 33.88 4.57
246 247 0.162933 GACCACGTAACATGTGCACG 59.837 55.000 24.07 24.07 41.32 5.34
248 249 1.269673 ACCACGTAACATGTGCACGTA 60.270 47.619 28.22 4.58 46.34 3.57
249 250 1.125384 CCACGTAACATGTGCACGTAC 59.875 52.381 28.22 14.27 46.34 3.67
250 251 1.054574 ACGTAACATGTGCACGTACG 58.945 50.000 27.85 26.73 46.23 3.67
251 252 1.054574 CGTAACATGTGCACGTACGT 58.945 50.000 16.72 16.72 0.00 3.57
252 253 1.056726 CGTAACATGTGCACGTACGTC 59.943 52.381 19.94 13.82 0.00 4.34
253 254 1.387756 GTAACATGTGCACGTACGTCC 59.612 52.381 19.94 10.90 0.00 4.79
254 255 0.249531 AACATGTGCACGTACGTCCA 60.250 50.000 19.94 14.15 0.00 4.02
255 256 0.942410 ACATGTGCACGTACGTCCAC 60.942 55.000 30.72 30.72 37.31 4.02
256 257 1.373748 ATGTGCACGTACGTCCACC 60.374 57.895 33.08 18.96 36.04 4.61
257 258 3.101428 GTGCACGTACGTCCACCG 61.101 66.667 28.09 14.02 44.03 4.94
258 259 4.345962 TGCACGTACGTCCACCGG 62.346 66.667 19.94 7.41 42.24 5.28
260 261 4.345962 CACGTACGTCCACCGGCA 62.346 66.667 19.94 0.00 42.24 5.69
261 262 4.347453 ACGTACGTCCACCGGCAC 62.347 66.667 16.72 0.00 42.24 5.01
263 264 4.747529 GTACGTCCACCGGCACCC 62.748 72.222 0.00 0.00 42.24 4.61
272 273 4.323477 CCGGCACCCTGGAACGAA 62.323 66.667 0.00 0.00 0.00 3.85
273 274 3.047877 CGGCACCCTGGAACGAAC 61.048 66.667 0.00 0.00 0.00 3.95
274 275 2.430367 GGCACCCTGGAACGAACT 59.570 61.111 0.00 0.00 0.00 3.01
275 276 1.671379 GGCACCCTGGAACGAACTC 60.671 63.158 0.00 0.00 0.00 3.01
276 277 1.371558 GCACCCTGGAACGAACTCT 59.628 57.895 0.00 0.00 0.00 3.24
277 278 0.951040 GCACCCTGGAACGAACTCTG 60.951 60.000 0.00 0.00 0.00 3.35
278 279 0.320771 CACCCTGGAACGAACTCTGG 60.321 60.000 0.00 0.00 0.00 3.86
279 280 1.296715 CCCTGGAACGAACTCTGGG 59.703 63.158 0.00 0.00 0.00 4.45
280 281 1.296715 CCTGGAACGAACTCTGGGG 59.703 63.158 0.00 0.00 0.00 4.96
281 282 1.376037 CTGGAACGAACTCTGGGGC 60.376 63.158 0.00 0.00 0.00 5.80
282 283 2.434359 GGAACGAACTCTGGGGCG 60.434 66.667 0.00 0.00 0.00 6.13
283 284 3.119096 GAACGAACTCTGGGGCGC 61.119 66.667 0.00 0.00 0.00 6.53
284 285 3.876589 GAACGAACTCTGGGGCGCA 62.877 63.158 10.83 3.57 0.00 6.09
285 286 3.883744 AACGAACTCTGGGGCGCAG 62.884 63.158 24.22 24.22 0.00 5.18
286 287 4.069232 CGAACTCTGGGGCGCAGA 62.069 66.667 29.31 29.31 0.00 4.26
287 288 2.435059 GAACTCTGGGGCGCAGAC 60.435 66.667 28.02 16.15 0.00 3.51
298 299 4.246206 CGCAGACCGCATGCATGG 62.246 66.667 27.34 14.85 44.05 3.66
299 300 3.896133 GCAGACCGCATGCATGGG 61.896 66.667 31.05 31.05 43.31 4.00
300 301 2.438975 CAGACCGCATGCATGGGT 60.439 61.111 33.67 31.27 38.88 4.51
301 302 2.438975 AGACCGCATGCATGGGTG 60.439 61.111 31.98 26.94 38.88 4.61
311 312 4.643795 CATGGGTGCAGAACGGAT 57.356 55.556 0.00 0.00 0.00 4.18
312 313 2.100846 CATGGGTGCAGAACGGATG 58.899 57.895 0.00 0.00 0.00 3.51
313 314 1.077501 ATGGGTGCAGAACGGATGG 60.078 57.895 0.00 0.00 0.00 3.51
314 315 1.561769 ATGGGTGCAGAACGGATGGA 61.562 55.000 0.00 0.00 0.00 3.41
315 316 1.450312 GGGTGCAGAACGGATGGAG 60.450 63.158 0.00 0.00 0.00 3.86
316 317 2.109126 GGTGCAGAACGGATGGAGC 61.109 63.158 0.00 0.00 0.00 4.70
317 318 2.125552 TGCAGAACGGATGGAGCG 60.126 61.111 0.00 0.00 0.00 5.03
318 319 2.184322 GCAGAACGGATGGAGCGA 59.816 61.111 0.00 0.00 0.00 4.93
319 320 1.227380 GCAGAACGGATGGAGCGAT 60.227 57.895 0.00 0.00 0.00 4.58
320 321 1.218230 GCAGAACGGATGGAGCGATC 61.218 60.000 0.00 0.00 0.00 3.69
321 322 0.598680 CAGAACGGATGGAGCGATCC 60.599 60.000 14.17 14.17 38.93 3.36
325 326 4.688966 GGATGGAGCGATCCGGGC 62.689 72.222 16.16 6.47 32.77 6.13
369 370 3.315949 GGCCGAGGTGTGGTGGTA 61.316 66.667 0.00 0.00 0.00 3.25
370 371 2.047560 GCCGAGGTGTGGTGGTAC 60.048 66.667 0.00 0.00 0.00 3.34
371 372 2.260434 CCGAGGTGTGGTGGTACG 59.740 66.667 0.00 0.00 0.00 3.67
372 373 2.270257 CCGAGGTGTGGTGGTACGA 61.270 63.158 0.00 0.00 0.00 3.43
373 374 1.211969 CGAGGTGTGGTGGTACGAG 59.788 63.158 0.00 0.00 0.00 4.18
374 375 1.590147 GAGGTGTGGTGGTACGAGG 59.410 63.158 0.00 0.00 0.00 4.63
375 376 1.885163 GAGGTGTGGTGGTACGAGGG 61.885 65.000 0.00 0.00 0.00 4.30
376 377 1.909781 GGTGTGGTGGTACGAGGGA 60.910 63.158 0.00 0.00 0.00 4.20
377 378 1.590147 GTGTGGTGGTACGAGGGAG 59.410 63.158 0.00 0.00 0.00 4.30
378 379 1.608336 TGTGGTGGTACGAGGGAGG 60.608 63.158 0.00 0.00 0.00 4.30
379 380 2.038329 TGGTGGTACGAGGGAGGG 59.962 66.667 0.00 0.00 0.00 4.30
380 381 2.361771 GGTGGTACGAGGGAGGGA 59.638 66.667 0.00 0.00 0.00 4.20
381 382 1.305549 GGTGGTACGAGGGAGGGAA 60.306 63.158 0.00 0.00 0.00 3.97
382 383 0.906282 GGTGGTACGAGGGAGGGAAA 60.906 60.000 0.00 0.00 0.00 3.13
383 384 0.248565 GTGGTACGAGGGAGGGAAAC 59.751 60.000 0.00 0.00 0.00 2.78
384 385 1.252904 TGGTACGAGGGAGGGAAACG 61.253 60.000 0.00 0.00 0.00 3.60
385 386 1.153686 GTACGAGGGAGGGAAACGC 60.154 63.158 0.00 0.00 0.00 4.84
386 387 2.703798 TACGAGGGAGGGAAACGCG 61.704 63.158 3.53 3.53 0.00 6.01
387 388 3.755628 CGAGGGAGGGAAACGCGA 61.756 66.667 15.93 0.00 0.00 5.87
388 389 2.660802 GAGGGAGGGAAACGCGAA 59.339 61.111 15.93 0.00 0.00 4.70
389 390 1.004200 GAGGGAGGGAAACGCGAAA 60.004 57.895 15.93 0.00 0.00 3.46
390 391 1.003718 AGGGAGGGAAACGCGAAAG 60.004 57.895 15.93 0.00 0.00 2.62
391 392 2.038837 GGGAGGGAAACGCGAAAGG 61.039 63.158 15.93 0.00 0.00 3.11
392 393 2.687805 GGAGGGAAACGCGAAAGGC 61.688 63.158 15.93 0.00 38.69 4.35
393 394 1.964373 GAGGGAAACGCGAAAGGCA 60.964 57.895 15.93 0.00 43.84 4.75
394 395 1.303317 AGGGAAACGCGAAAGGCAT 60.303 52.632 15.93 0.00 43.84 4.40
395 396 0.893727 AGGGAAACGCGAAAGGCATT 60.894 50.000 15.93 0.00 43.84 3.56
396 397 0.732538 GGGAAACGCGAAAGGCATTG 60.733 55.000 15.93 0.00 43.84 2.82
397 398 0.732538 GGAAACGCGAAAGGCATTGG 60.733 55.000 15.93 0.00 43.84 3.16
398 399 1.344226 GAAACGCGAAAGGCATTGGC 61.344 55.000 15.93 1.17 43.84 4.52
401 402 2.504681 GCGAAAGGCATTGGCGTG 60.505 61.111 4.38 0.00 42.87 5.34
402 403 2.179018 CGAAAGGCATTGGCGTGG 59.821 61.111 4.38 0.00 42.47 4.94
403 404 2.331893 CGAAAGGCATTGGCGTGGA 61.332 57.895 4.38 0.00 42.47 4.02
404 405 1.508088 GAAAGGCATTGGCGTGGAG 59.492 57.895 4.38 0.00 42.47 3.86
405 406 1.228552 AAAGGCATTGGCGTGGAGT 60.229 52.632 4.38 0.00 42.47 3.85
406 407 1.526575 AAAGGCATTGGCGTGGAGTG 61.527 55.000 4.38 0.00 42.47 3.51
407 408 4.120331 GGCATTGGCGTGGAGTGC 62.120 66.667 0.00 0.00 42.47 4.40
408 409 3.058160 GCATTGGCGTGGAGTGCT 61.058 61.111 0.00 0.00 33.25 4.40
409 410 2.872557 CATTGGCGTGGAGTGCTG 59.127 61.111 0.00 0.00 0.00 4.41
410 411 3.058160 ATTGGCGTGGAGTGCTGC 61.058 61.111 0.00 0.00 0.00 5.25
442 443 4.770540 CCATGCACCAGGGAATGT 57.229 55.556 0.00 0.00 37.52 2.71
443 444 2.195389 CCATGCACCAGGGAATGTG 58.805 57.895 0.00 0.00 37.52 3.21
444 445 1.324740 CCATGCACCAGGGAATGTGG 61.325 60.000 0.00 0.00 37.52 4.17
445 446 1.000739 ATGCACCAGGGAATGTGGG 59.999 57.895 0.00 0.00 39.65 4.61
446 447 1.803453 ATGCACCAGGGAATGTGGGT 61.803 55.000 0.00 0.00 39.65 4.51
447 448 1.228862 GCACCAGGGAATGTGGGTT 60.229 57.895 0.00 0.00 39.65 4.11
448 449 1.250840 GCACCAGGGAATGTGGGTTC 61.251 60.000 0.00 0.00 39.65 3.62
449 450 0.611896 CACCAGGGAATGTGGGTTCC 60.612 60.000 0.00 0.00 45.61 3.62
450 451 1.378514 CCAGGGAATGTGGGTTCCG 60.379 63.158 0.06 0.00 46.97 4.30
451 452 1.378762 CAGGGAATGTGGGTTCCGT 59.621 57.895 0.06 0.00 46.97 4.69
452 453 1.378762 AGGGAATGTGGGTTCCGTG 59.621 57.895 0.56 0.00 46.97 4.94
453 454 1.677633 GGGAATGTGGGTTCCGTGG 60.678 63.158 0.06 0.00 46.97 4.94
454 455 2.340328 GGAATGTGGGTTCCGTGGC 61.340 63.158 0.00 0.00 38.41 5.01
455 456 2.282887 AATGTGGGTTCCGTGGCC 60.283 61.111 0.00 0.00 0.00 5.36
456 457 3.140073 AATGTGGGTTCCGTGGCCA 62.140 57.895 0.00 0.00 0.00 5.36
457 458 3.567579 ATGTGGGTTCCGTGGCCAG 62.568 63.158 5.11 0.00 0.00 4.85
460 461 4.410400 GGGTTCCGTGGCCAGGAG 62.410 72.222 26.78 16.07 39.22 3.69
461 462 4.410400 GGTTCCGTGGCCAGGAGG 62.410 72.222 26.78 19.90 39.22 4.30
462 463 3.319198 GTTCCGTGGCCAGGAGGA 61.319 66.667 26.78 21.85 39.22 3.71
463 464 3.003173 TTCCGTGGCCAGGAGGAG 61.003 66.667 26.78 9.93 39.22 3.69
470 471 3.934962 GCCAGGAGGAGCCCGATC 61.935 72.222 0.00 0.00 37.37 3.69
471 472 2.444706 CCAGGAGGAGCCCGATCA 60.445 66.667 0.00 0.00 37.37 2.92
472 473 2.506061 CCAGGAGGAGCCCGATCAG 61.506 68.421 0.00 0.00 37.37 2.90
473 474 2.123077 AGGAGGAGCCCGATCAGG 60.123 66.667 0.00 0.00 37.37 3.86
474 475 2.123251 GGAGGAGCCCGATCAGGA 60.123 66.667 0.00 0.00 45.00 3.86
475 476 2.503382 GGAGGAGCCCGATCAGGAC 61.503 68.421 0.00 0.00 45.00 3.85
476 477 2.444895 AGGAGCCCGATCAGGACC 60.445 66.667 0.00 1.41 45.00 4.46
477 478 2.764128 GGAGCCCGATCAGGACCA 60.764 66.667 0.00 0.00 45.00 4.02
478 479 2.143419 GGAGCCCGATCAGGACCAT 61.143 63.158 0.00 0.00 45.00 3.55
479 480 1.369321 GAGCCCGATCAGGACCATC 59.631 63.158 0.00 0.00 45.00 3.51
480 481 2.105806 GAGCCCGATCAGGACCATCC 62.106 65.000 0.00 0.00 45.00 3.51
481 482 2.737180 CCCGATCAGGACCATCCG 59.263 66.667 5.32 0.00 42.75 4.18
482 483 2.134287 CCCGATCAGGACCATCCGT 61.134 63.158 5.32 0.00 42.75 4.69
483 484 1.364171 CCGATCAGGACCATCCGTC 59.636 63.158 0.00 0.00 42.75 4.79
490 491 3.446570 GACCATCCGTCCGTCCGT 61.447 66.667 0.00 0.00 35.23 4.69
491 492 3.407046 GACCATCCGTCCGTCCGTC 62.407 68.421 0.00 0.00 35.23 4.79
492 493 4.203076 CCATCCGTCCGTCCGTCC 62.203 72.222 0.00 0.00 0.00 4.79
493 494 4.203076 CATCCGTCCGTCCGTCCC 62.203 72.222 0.00 0.00 0.00 4.46
506 507 3.256960 GTCCCCAGGCCAGGTGAA 61.257 66.667 13.97 0.00 0.00 3.18
507 508 2.204291 TCCCCAGGCCAGGTGAAT 60.204 61.111 13.97 0.00 0.00 2.57
508 509 2.276740 CCCCAGGCCAGGTGAATC 59.723 66.667 13.97 0.00 0.00 2.52
509 510 2.276740 CCCAGGCCAGGTGAATCC 59.723 66.667 13.97 0.00 0.00 3.01
510 511 2.124570 CCAGGCCAGGTGAATCCG 60.125 66.667 5.01 0.00 41.99 4.18
511 512 2.671070 CAGGCCAGGTGAATCCGT 59.329 61.111 5.01 0.00 41.99 4.69
512 513 1.746615 CAGGCCAGGTGAATCCGTG 60.747 63.158 5.01 0.00 41.99 4.94
513 514 2.438434 GGCCAGGTGAATCCGTGG 60.438 66.667 0.00 6.23 41.99 4.94
514 515 3.134127 GCCAGGTGAATCCGTGGC 61.134 66.667 15.67 15.67 45.60 5.01
515 516 2.819595 CCAGGTGAATCCGTGGCG 60.820 66.667 0.00 0.00 41.99 5.69
516 517 3.499737 CAGGTGAATCCGTGGCGC 61.500 66.667 0.00 0.00 41.99 6.53
517 518 4.778143 AGGTGAATCCGTGGCGCC 62.778 66.667 22.73 22.73 41.99 6.53
519 520 3.499737 GTGAATCCGTGGCGCCAG 61.500 66.667 33.73 23.16 0.00 4.85
520 521 4.776322 TGAATCCGTGGCGCCAGG 62.776 66.667 36.16 36.16 0.00 4.45
538 539 4.048470 GAAGGGGCAGGGGTCCAC 62.048 72.222 0.00 0.00 42.08 4.02
586 587 4.394712 CGCAACCGCCTCCTTCCT 62.395 66.667 0.00 0.00 33.11 3.36
587 588 2.034221 GCAACCGCCTCCTTCCTT 59.966 61.111 0.00 0.00 0.00 3.36
588 589 2.335712 GCAACCGCCTCCTTCCTTG 61.336 63.158 0.00 0.00 0.00 3.61
589 590 1.675641 CAACCGCCTCCTTCCTTGG 60.676 63.158 0.00 0.00 0.00 3.61
590 591 3.569200 AACCGCCTCCTTCCTTGGC 62.569 63.158 0.00 0.00 42.94 4.52
591 592 4.803908 CCGCCTCCTTCCTTGGCC 62.804 72.222 0.00 0.00 43.42 5.36
593 594 3.717294 GCCTCCTTCCTTGGCCGA 61.717 66.667 0.00 0.00 40.71 5.54
594 595 2.586792 CCTCCTTCCTTGGCCGAG 59.413 66.667 13.75 13.75 0.00 4.63
595 596 2.586792 CTCCTTCCTTGGCCGAGG 59.413 66.667 31.27 31.27 38.20 4.63
596 597 3.689002 CTCCTTCCTTGGCCGAGGC 62.689 68.421 32.12 5.37 36.71 4.70
597 598 3.721706 CCTTCCTTGGCCGAGGCT 61.722 66.667 32.12 0.00 41.60 4.58
598 599 2.124942 CTTCCTTGGCCGAGGCTC 60.125 66.667 32.12 3.87 41.60 4.70
599 600 4.082523 TTCCTTGGCCGAGGCTCG 62.083 66.667 32.12 29.16 41.60 5.03
601 602 4.521062 CCTTGGCCGAGGCTCGAG 62.521 72.222 36.47 25.92 43.74 4.04
602 603 3.452786 CTTGGCCGAGGCTCGAGA 61.453 66.667 36.47 17.36 43.74 4.04
603 604 3.423162 CTTGGCCGAGGCTCGAGAG 62.423 68.421 36.47 21.38 43.74 3.20
604 605 3.938637 TTGGCCGAGGCTCGAGAGA 62.939 63.158 36.47 17.24 43.74 3.10
614 615 4.149346 TCGAGAGAGATGCCTCCG 57.851 61.111 0.00 0.00 40.30 4.63
615 616 2.190170 TCGAGAGAGATGCCTCCGC 61.190 63.158 0.00 0.00 40.30 5.54
616 617 2.334653 GAGAGAGATGCCTCCGCG 59.665 66.667 0.00 0.00 40.30 6.46
617 618 3.839642 GAGAGAGATGCCTCCGCGC 62.840 68.421 0.00 0.00 40.30 6.86
637 638 1.210931 CCTTGGCAGTTGCATGTCG 59.789 57.895 6.43 0.00 44.36 4.35
762 763 7.768120 AGAATTTACCATGCTTTGTTCAACAAA 59.232 29.630 14.96 14.96 44.91 2.83
772 773 7.629130 TGCTTTGTTCAACAAATTTTCTATGC 58.371 30.769 16.06 13.08 45.79 3.14
858 906 0.889186 CCCAAACAGAACCACCGGAG 60.889 60.000 9.46 0.00 0.00 4.63
888 1200 2.892425 GATCTTGACGGCCTGGCG 60.892 66.667 13.40 11.81 0.00 5.69
934 1246 2.640346 GAGGTCTCTCTGAACCGAAC 57.360 55.000 0.00 0.00 37.07 3.95
935 1247 0.882474 AGGTCTCTCTGAACCGAACG 59.118 55.000 0.00 0.00 31.28 3.95
936 1248 0.733223 GGTCTCTCTGAACCGAACGC 60.733 60.000 0.00 0.00 0.00 4.84
937 1249 0.241481 GTCTCTCTGAACCGAACGCT 59.759 55.000 0.00 0.00 0.00 5.07
938 1250 0.522180 TCTCTCTGAACCGAACGCTC 59.478 55.000 0.00 0.00 0.00 5.03
939 1251 0.456995 CTCTCTGAACCGAACGCTCC 60.457 60.000 0.00 0.00 0.00 4.70
940 1252 1.446272 CTCTGAACCGAACGCTCCC 60.446 63.158 0.00 0.00 0.00 4.30
941 1253 2.154798 CTCTGAACCGAACGCTCCCA 62.155 60.000 0.00 0.00 0.00 4.37
942 1254 1.738099 CTGAACCGAACGCTCCCAG 60.738 63.158 0.00 0.00 0.00 4.45
943 1255 2.434359 GAACCGAACGCTCCCAGG 60.434 66.667 0.00 0.00 0.00 4.45
944 1256 2.920912 AACCGAACGCTCCCAGGA 60.921 61.111 0.00 0.00 0.00 3.86
945 1257 3.236003 AACCGAACGCTCCCAGGAC 62.236 63.158 0.00 0.00 0.00 3.85
946 1258 3.691342 CCGAACGCTCCCAGGACA 61.691 66.667 0.00 0.00 0.00 4.02
947 1259 2.432628 CGAACGCTCCCAGGACAC 60.433 66.667 0.00 0.00 0.00 3.67
948 1260 2.932234 CGAACGCTCCCAGGACACT 61.932 63.158 0.00 0.00 0.00 3.55
949 1261 1.079750 GAACGCTCCCAGGACACTC 60.080 63.158 0.00 0.00 0.00 3.51
950 1262 1.816863 GAACGCTCCCAGGACACTCA 61.817 60.000 0.00 0.00 0.00 3.41
951 1263 1.194781 AACGCTCCCAGGACACTCAT 61.195 55.000 0.00 0.00 0.00 2.90
1149 1461 2.264794 CGTACGCCTCTTGCCCTT 59.735 61.111 0.52 0.00 36.24 3.95
1150 1462 2.100631 CGTACGCCTCTTGCCCTTG 61.101 63.158 0.52 0.00 36.24 3.61
1203 1517 3.533105 TCCCTGACGCGTGTGTGT 61.533 61.111 20.70 0.00 42.75 3.72
1214 1528 1.333619 GCGTGTGTGTTCTTGGTGATT 59.666 47.619 0.00 0.00 0.00 2.57
1226 1540 1.960417 TGGTGATTTTCGCAGTGACA 58.040 45.000 0.00 0.00 0.00 3.58
1284 1598 0.038618 GCCGCGTTTGGGAATTTCTT 60.039 50.000 4.92 0.00 0.00 2.52
1291 1605 5.465935 GCGTTTGGGAATTTCTTCATGTTA 58.534 37.500 0.00 0.00 32.70 2.41
1293 1607 6.677913 CGTTTGGGAATTTCTTCATGTTACT 58.322 36.000 0.00 0.00 32.70 2.24
1364 1707 3.373130 CCTTTTCGTAGATTTCCCGGAAC 59.627 47.826 0.73 0.00 35.04 3.62
1441 1784 4.613850 GCGTCCATTTGTTCTTCTTCTTCC 60.614 45.833 0.00 0.00 0.00 3.46
1562 1908 1.077501 CAATGTGGGCGATCAGGGT 60.078 57.895 0.00 0.00 0.00 4.34
1592 1938 3.011595 TGGGACAGAATGGTGGAATTCAT 59.988 43.478 7.93 0.00 43.62 2.57
1639 1985 1.561542 GATGTCAGGTGAATCCAGGGT 59.438 52.381 0.00 0.00 39.02 4.34
1650 1996 4.224370 GTGAATCCAGGGTTAGTAAGGACA 59.776 45.833 0.00 0.00 0.00 4.02
1696 2042 3.706698 CGAAGGTGTCGTCACATGATAT 58.293 45.455 14.58 0.00 45.09 1.63
1709 2055 8.466798 TCGTCACATGATATGAGTAAGAGAAAA 58.533 33.333 0.00 0.00 0.00 2.29
1712 2058 8.466798 TCACATGATATGAGTAAGAGAAAACGA 58.533 33.333 0.00 0.00 0.00 3.85
1837 2183 4.337555 GCACAATGCTGGAGATCTAAATGT 59.662 41.667 0.00 0.00 40.96 2.71
1908 2254 4.277672 GTGCATACATTCCTGCTCATCAAT 59.722 41.667 0.00 0.00 39.16 2.57
1914 2260 9.241317 CATACATTCCTGCTCATCAATTAAAAC 57.759 33.333 0.00 0.00 0.00 2.43
1979 2325 8.106247 TGTGAACAGACAAAATCCTTATTACC 57.894 34.615 0.00 0.00 0.00 2.85
2065 2411 4.160252 AGGTCAACATTCAGTTTGCAGTTT 59.840 37.500 0.00 0.00 38.74 2.66
2071 2417 6.189375 AACATTCAGTTTGCAGTTTCTGCTG 61.189 40.000 19.88 11.41 45.19 4.41
2150 2497 5.319043 AGTACTCCCTCCAAATTTGAACA 57.681 39.130 19.86 2.32 0.00 3.18
2151 2498 5.316987 AGTACTCCCTCCAAATTTGAACAG 58.683 41.667 19.86 11.36 0.00 3.16
2220 2567 6.483974 TCACTTCTTTGCGGTTCTTATGTTTA 59.516 34.615 0.00 0.00 0.00 2.01
2251 2601 7.916914 TTCCTTCTTGTAACTAATTGTAGGC 57.083 36.000 0.00 0.00 0.00 3.93
2252 2602 6.103997 TCCTTCTTGTAACTAATTGTAGGCG 58.896 40.000 0.00 0.00 0.00 5.52
2611 2962 7.962995 TTGGCATTAGGTAATGATTTAACCA 57.037 32.000 12.93 7.03 44.40 3.67
2745 3096 7.646130 CCAACTTCTTCAGATAAGACGATACTC 59.354 40.741 0.00 0.00 0.00 2.59
2776 3127 2.734079 GACCAGTTGAGAAGAGCGAAAG 59.266 50.000 0.00 0.00 0.00 2.62
2968 3319 1.890876 TGATGCGTACCTGCTGTTTT 58.109 45.000 0.00 0.00 35.36 2.43
2984 3335 8.573035 CCTGCTGTTTTGGTTACTCTTTTATAA 58.427 33.333 0.00 0.00 0.00 0.98
2993 3344 8.611654 TGGTTACTCTTTTATAACAAGTGACC 57.388 34.615 18.71 18.71 43.31 4.02
3091 3442 4.919754 GCAAAGATCAAACAAGTCCATGAC 59.080 41.667 0.00 0.00 0.00 3.06
3106 3457 1.521450 ATGACAACTGTGCAGCTGCC 61.521 55.000 34.64 25.13 41.18 4.85
3229 3580 1.446907 AGAGGCTTCATTGTCTTGCG 58.553 50.000 0.00 0.00 0.00 4.85
3406 3757 5.356751 TGCTAAGGTATATTGTTTGGTGCAG 59.643 40.000 0.00 0.00 0.00 4.41
3437 3788 5.235616 GCACGCATAACTAATTAGGTGCTTA 59.764 40.000 23.69 12.63 39.90 3.09
3438 3789 6.646636 CACGCATAACTAATTAGGTGCTTAC 58.353 40.000 24.51 8.53 36.31 2.34
3492 3846 9.610705 TGACCATTTTCAGAAAATTCAAATTCA 57.389 25.926 17.12 10.74 38.97 2.57
3577 3931 9.112725 CATGTCTTCCATATTGTGACTGATAAA 57.887 33.333 0.00 0.00 30.71 1.40
3650 4004 2.941720 GCTGCTATTCAGGTCCAGAAAG 59.058 50.000 0.19 2.20 43.06 2.62
3655 4009 5.189180 GCTATTCAGGTCCAGAAAGTTGAT 58.811 41.667 0.19 0.00 0.00 2.57
3763 4117 7.824779 ACTCCACAGAATAAACCTGATAGAAAC 59.175 37.037 0.00 0.00 35.69 2.78
4009 4363 3.713826 AACCCTCTTATCGCCAAGAAA 57.286 42.857 1.07 0.00 34.22 2.52
4162 4520 5.817816 CGATATTTAAAGTGAGCCCTCAACT 59.182 40.000 0.00 0.00 41.85 3.16
4197 4555 4.385825 TGAGCTCCGACAACAAGTAAAAT 58.614 39.130 12.15 0.00 0.00 1.82
4234 4592 8.506168 TTCTTTCTTTCCGTATGAGCATTATT 57.494 30.769 0.00 0.00 0.00 1.40
4265 4625 8.691797 TGCCATTGATCCCTTTTATTTAAGTAC 58.308 33.333 0.00 0.00 0.00 2.73
4294 4674 6.942576 ACTATGTTGGAGCTGAGTATGTTTTT 59.057 34.615 0.00 0.00 0.00 1.94
4328 4709 6.994421 TCTACTCTTGCCATATATTCCACA 57.006 37.500 0.00 0.00 0.00 4.17
4332 4713 5.300286 ACTCTTGCCATATATTCCACAAAGC 59.700 40.000 0.00 0.00 0.00 3.51
4483 4864 1.339610 CAAGCGGAATGTCAACCCAAA 59.660 47.619 0.00 0.00 0.00 3.28
4493 4874 4.771114 TGTCAACCCAAAGGATATCGAT 57.229 40.909 2.16 2.16 36.73 3.59
4564 4945 0.318762 GGGTTGCCAAAATACCGCAA 59.681 50.000 0.00 0.00 40.06 4.85
4585 4966 5.590259 GCAATTACTGGTCCAAGTATGTCAT 59.410 40.000 0.00 0.00 32.78 3.06
4602 4983 1.058553 TCATTTTCGATCACGCGTTCG 59.941 47.619 23.53 23.53 42.43 3.95
4625 5006 0.532862 GGGAGTGCCACATACATCCG 60.533 60.000 0.00 0.00 35.15 4.18
4656 5037 0.541392 TGCGGAATCCTGTGCATAGT 59.459 50.000 9.80 0.00 31.31 2.12
4675 5056 2.027377 AGTCTGCTGAGATGGTTTCAGG 60.027 50.000 4.62 0.00 41.82 3.86
4697 5078 2.380084 TTTTGTAGCTCTGTAGGGCG 57.620 50.000 0.00 0.00 0.00 6.13
4714 5095 1.202545 GGCGTCTCTTCCTTGGTATCC 60.203 57.143 0.00 0.00 0.00 2.59
4822 5205 0.322975 AGCCAACAGTGCTGTAGAGG 59.677 55.000 5.18 9.10 44.13 3.69
4955 5348 3.750130 GTCAGCATGCATATCTTACCCAG 59.250 47.826 21.98 0.00 34.76 4.45
4970 5363 7.502120 TCTTACCCAGTTAAGTAGCTATACG 57.498 40.000 0.00 0.00 36.97 3.06
4972 5365 7.775093 TCTTACCCAGTTAAGTAGCTATACGAA 59.225 37.037 0.00 0.00 36.97 3.85
4975 5368 7.208080 ACCCAGTTAAGTAGCTATACGAAATG 58.792 38.462 0.00 0.00 36.97 2.32
4977 5370 7.595502 CCCAGTTAAGTAGCTATACGAAATGAG 59.404 40.741 0.00 0.00 36.97 2.90
4978 5371 8.136165 CCAGTTAAGTAGCTATACGAAATGAGT 58.864 37.037 0.00 0.00 36.97 3.41
4979 5372 9.517609 CAGTTAAGTAGCTATACGAAATGAGTT 57.482 33.333 0.00 0.00 36.97 3.01
4988 5381 6.238103 GCTATACGAAATGAGTTTGCTTGCTA 60.238 38.462 0.00 0.00 0.00 3.49
4989 5382 4.147219 ACGAAATGAGTTTGCTTGCTAC 57.853 40.909 0.00 0.00 0.00 3.58
4990 5383 3.815401 ACGAAATGAGTTTGCTTGCTACT 59.185 39.130 0.00 0.00 0.00 2.57
5004 5397 4.379499 GCTTGCTACTGGTAAATTCACACC 60.379 45.833 0.00 0.00 35.24 4.16
5067 5690 5.826601 TCTTGCAACAGACACAAACATTA 57.173 34.783 0.00 0.00 0.00 1.90
5068 5691 5.577835 TCTTGCAACAGACACAAACATTAC 58.422 37.500 0.00 0.00 0.00 1.89
5070 5693 5.168526 TGCAACAGACACAAACATTACTC 57.831 39.130 0.00 0.00 0.00 2.59
5072 5695 4.260620 GCAACAGACACAAACATTACTCGT 60.261 41.667 0.00 0.00 0.00 4.18
5075 5698 6.520792 ACAGACACAAACATTACTCGTTAC 57.479 37.500 0.00 0.00 0.00 2.50
5077 5700 6.420008 ACAGACACAAACATTACTCGTTACTC 59.580 38.462 0.00 0.00 0.00 2.59
5078 5701 5.924825 AGACACAAACATTACTCGTTACTCC 59.075 40.000 0.00 0.00 0.00 3.85
5081 5770 4.992951 ACAAACATTACTCGTTACTCCACC 59.007 41.667 0.00 0.00 0.00 4.61
5086 5775 5.187186 ACATTACTCGTTACTCCACCATTCT 59.813 40.000 0.00 0.00 0.00 2.40
5160 5849 1.288335 ACGGAGTCCTGGGAGTAATCT 59.712 52.381 7.77 0.00 29.74 2.40
5165 5854 4.538738 GAGTCCTGGGAGTAATCTACAGT 58.461 47.826 12.12 0.00 31.25 3.55
5166 5855 5.398809 GGAGTCCTGGGAGTAATCTACAGTA 60.399 48.000 0.41 0.00 31.25 2.74
5167 5856 6.088541 AGTCCTGGGAGTAATCTACAGTAA 57.911 41.667 12.12 1.44 31.25 2.24
5168 5857 5.892686 AGTCCTGGGAGTAATCTACAGTAAC 59.107 44.000 12.12 10.20 31.25 2.50
5169 5858 5.068855 GTCCTGGGAGTAATCTACAGTAACC 59.931 48.000 12.12 0.00 31.25 2.85
5170 5859 4.960469 CCTGGGAGTAATCTACAGTAACCA 59.040 45.833 12.12 0.00 31.25 3.67
5171 5860 5.424252 CCTGGGAGTAATCTACAGTAACCAA 59.576 44.000 12.12 0.00 31.25 3.67
5172 5861 6.290294 TGGGAGTAATCTACAGTAACCAAC 57.710 41.667 0.00 0.00 0.00 3.77
5173 5862 5.781306 TGGGAGTAATCTACAGTAACCAACA 59.219 40.000 0.00 0.00 0.00 3.33
5175 5864 5.811100 GGAGTAATCTACAGTAACCAACAGC 59.189 44.000 0.00 0.00 0.00 4.40
5176 5865 5.408356 AGTAATCTACAGTAACCAACAGCG 58.592 41.667 0.00 0.00 0.00 5.18
5177 5866 3.955650 ATCTACAGTAACCAACAGCGT 57.044 42.857 0.00 0.00 0.00 5.07
5178 5867 3.738830 TCTACAGTAACCAACAGCGTT 57.261 42.857 0.00 0.00 0.00 4.84
5179 5868 4.852134 TCTACAGTAACCAACAGCGTTA 57.148 40.909 0.00 0.00 0.00 3.18
5180 5869 4.549458 TCTACAGTAACCAACAGCGTTAC 58.451 43.478 3.26 3.26 43.82 2.50
5181 5870 2.486918 ACAGTAACCAACAGCGTTACC 58.513 47.619 7.12 0.00 44.32 2.85
5182 5871 1.458064 CAGTAACCAACAGCGTTACCG 59.542 52.381 7.12 0.00 44.32 4.02
5202 5891 1.200020 GCGCTGGTTTAATCTGCAAGT 59.800 47.619 0.00 0.00 33.76 3.16
5210 5899 4.377431 GGTTTAATCTGCAAGTGAGACACG 60.377 45.833 0.00 0.00 39.64 4.49
5249 5938 5.977489 AATACTGCACTGTGTACTACTGA 57.023 39.130 9.86 0.00 33.00 3.41
5304 5999 0.733909 GTACGTACAACCGCCACCTC 60.734 60.000 20.67 0.00 0.00 3.85
5371 6075 3.607661 GCCTCCCGATCCTCGTCC 61.608 72.222 0.00 0.00 38.40 4.79
5374 6078 2.203167 TCCCGATCCTCGTCCTCG 60.203 66.667 0.00 0.00 38.40 4.63
5514 6218 1.652563 CGACATCATCCGGACGCTA 59.347 57.895 6.12 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.563898 CACGCGGATGTAGTTTCTAAATATATA 57.436 33.333 12.47 0.00 0.00 0.86
38 39 8.301720 TCACGCGGATGTAGTTTCTAAATATAT 58.698 33.333 12.47 0.00 0.00 0.86
39 40 7.650890 TCACGCGGATGTAGTTTCTAAATATA 58.349 34.615 12.47 0.00 0.00 0.86
40 41 6.509656 TCACGCGGATGTAGTTTCTAAATAT 58.490 36.000 12.47 0.00 0.00 1.28
41 42 5.893687 TCACGCGGATGTAGTTTCTAAATA 58.106 37.500 12.47 0.00 0.00 1.40
42 43 4.751060 TCACGCGGATGTAGTTTCTAAAT 58.249 39.130 12.47 0.00 0.00 1.40
43 44 4.177165 TCACGCGGATGTAGTTTCTAAA 57.823 40.909 12.47 0.00 0.00 1.85
44 45 3.853831 TCACGCGGATGTAGTTTCTAA 57.146 42.857 12.47 0.00 0.00 2.10
45 46 3.853831 TTCACGCGGATGTAGTTTCTA 57.146 42.857 12.47 0.00 0.00 2.10
46 47 2.736144 TTCACGCGGATGTAGTTTCT 57.264 45.000 12.47 0.00 0.00 2.52
47 48 3.799137 TTTTCACGCGGATGTAGTTTC 57.201 42.857 12.47 0.00 0.00 2.78
48 49 4.000988 AGATTTTCACGCGGATGTAGTTT 58.999 39.130 12.47 0.00 0.00 2.66
49 50 3.596214 AGATTTTCACGCGGATGTAGTT 58.404 40.909 12.47 0.00 0.00 2.24
50 51 3.247006 AGATTTTCACGCGGATGTAGT 57.753 42.857 12.47 0.00 0.00 2.73
51 52 4.207224 CAGTAGATTTTCACGCGGATGTAG 59.793 45.833 12.47 0.00 0.00 2.74
52 53 4.109766 CAGTAGATTTTCACGCGGATGTA 58.890 43.478 12.47 0.00 0.00 2.29
53 54 2.930040 CAGTAGATTTTCACGCGGATGT 59.070 45.455 12.47 0.00 0.00 3.06
54 55 3.186909 TCAGTAGATTTTCACGCGGATG 58.813 45.455 12.47 0.00 0.00 3.51
55 56 3.520290 TCAGTAGATTTTCACGCGGAT 57.480 42.857 12.47 0.00 0.00 4.18
56 57 3.520290 ATCAGTAGATTTTCACGCGGA 57.480 42.857 12.47 1.33 0.00 5.54
57 58 6.150318 AGTATATCAGTAGATTTTCACGCGG 58.850 40.000 12.47 0.00 35.67 6.46
58 59 7.624706 AAGTATATCAGTAGATTTTCACGCG 57.375 36.000 3.53 3.53 35.67 6.01
59 60 9.851043 GAAAAGTATATCAGTAGATTTTCACGC 57.149 33.333 0.00 0.00 35.67 5.34
96 97 9.559732 TCATCGATTGAGGAATTAAATATGTGT 57.440 29.630 0.00 0.00 30.77 3.72
97 98 9.817365 GTCATCGATTGAGGAATTAAATATGTG 57.183 33.333 0.00 0.00 36.55 3.21
98 99 9.003658 GGTCATCGATTGAGGAATTAAATATGT 57.996 33.333 0.00 0.00 36.55 2.29
99 100 9.224267 AGGTCATCGATTGAGGAATTAAATATG 57.776 33.333 0.00 0.00 36.55 1.78
101 102 9.929180 CTAGGTCATCGATTGAGGAATTAAATA 57.071 33.333 0.00 0.00 36.55 1.40
102 103 8.651389 TCTAGGTCATCGATTGAGGAATTAAAT 58.349 33.333 0.00 0.00 36.55 1.40
103 104 8.018537 TCTAGGTCATCGATTGAGGAATTAAA 57.981 34.615 0.00 0.00 36.55 1.52
104 105 7.597288 TCTAGGTCATCGATTGAGGAATTAA 57.403 36.000 0.00 0.00 36.55 1.40
105 106 7.287927 AGTTCTAGGTCATCGATTGAGGAATTA 59.712 37.037 0.00 0.00 36.55 1.40
106 107 6.098982 AGTTCTAGGTCATCGATTGAGGAATT 59.901 38.462 0.00 0.00 36.55 2.17
107 108 5.600484 AGTTCTAGGTCATCGATTGAGGAAT 59.400 40.000 0.00 0.00 36.55 3.01
108 109 4.956700 AGTTCTAGGTCATCGATTGAGGAA 59.043 41.667 0.00 0.00 36.55 3.36
109 110 4.537751 AGTTCTAGGTCATCGATTGAGGA 58.462 43.478 0.00 0.00 34.17 3.71
110 111 4.927978 AGTTCTAGGTCATCGATTGAGG 57.072 45.455 0.00 0.00 34.17 3.86
111 112 5.444983 CGTAGTTCTAGGTCATCGATTGAG 58.555 45.833 0.00 0.00 34.17 3.02
112 113 4.261072 GCGTAGTTCTAGGTCATCGATTGA 60.261 45.833 0.00 0.00 0.00 2.57
113 114 3.975670 GCGTAGTTCTAGGTCATCGATTG 59.024 47.826 0.00 0.00 0.00 2.67
114 115 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
115 116 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
116 117 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
117 118 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
118 119 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
119 120 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
120 121 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
121 122 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
122 123 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
123 124 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
124 125 7.320797 GTGTATAAGTCATTCGCGTAGTTCTAG 59.679 40.741 5.77 0.00 0.00 2.43
125 126 7.128331 GTGTATAAGTCATTCGCGTAGTTCTA 58.872 38.462 5.77 0.00 0.00 2.10
126 127 5.970023 GTGTATAAGTCATTCGCGTAGTTCT 59.030 40.000 5.77 0.00 0.00 3.01
127 128 5.172771 GGTGTATAAGTCATTCGCGTAGTTC 59.827 44.000 5.77 0.00 0.00 3.01
128 129 5.039333 GGTGTATAAGTCATTCGCGTAGTT 58.961 41.667 5.77 2.59 0.00 2.24
129 130 4.498682 GGGTGTATAAGTCATTCGCGTAGT 60.499 45.833 5.77 0.00 0.00 2.73
130 131 3.979495 GGGTGTATAAGTCATTCGCGTAG 59.021 47.826 5.77 0.00 0.00 3.51
131 132 3.548616 CGGGTGTATAAGTCATTCGCGTA 60.549 47.826 5.77 0.00 0.00 4.42
132 133 2.797087 CGGGTGTATAAGTCATTCGCGT 60.797 50.000 5.77 0.00 0.00 6.01
133 134 1.784856 CGGGTGTATAAGTCATTCGCG 59.215 52.381 0.00 0.00 0.00 5.87
134 135 2.132762 CCGGGTGTATAAGTCATTCGC 58.867 52.381 0.00 0.00 0.00 4.70
135 136 3.181484 TGTCCGGGTGTATAAGTCATTCG 60.181 47.826 0.00 0.00 0.00 3.34
136 137 4.395959 TGTCCGGGTGTATAAGTCATTC 57.604 45.455 0.00 0.00 0.00 2.67
137 138 4.829872 TTGTCCGGGTGTATAAGTCATT 57.170 40.909 0.00 0.00 0.00 2.57
138 139 4.383770 CCTTTGTCCGGGTGTATAAGTCAT 60.384 45.833 0.00 0.00 0.00 3.06
139 140 3.055675 CCTTTGTCCGGGTGTATAAGTCA 60.056 47.826 0.00 0.00 0.00 3.41
140 141 3.528532 CCTTTGTCCGGGTGTATAAGTC 58.471 50.000 0.00 0.00 0.00 3.01
141 142 2.237893 CCCTTTGTCCGGGTGTATAAGT 59.762 50.000 0.00 0.00 36.91 2.24
142 143 2.502538 TCCCTTTGTCCGGGTGTATAAG 59.497 50.000 0.00 0.00 42.56 1.73
143 144 2.502538 CTCCCTTTGTCCGGGTGTATAA 59.497 50.000 0.00 0.00 42.56 0.98
144 145 2.112998 CTCCCTTTGTCCGGGTGTATA 58.887 52.381 0.00 0.00 42.56 1.47
145 146 0.909623 CTCCCTTTGTCCGGGTGTAT 59.090 55.000 0.00 0.00 42.56 2.29
146 147 0.472352 ACTCCCTTTGTCCGGGTGTA 60.472 55.000 0.00 0.00 44.30 2.90
147 148 0.472352 TACTCCCTTTGTCCGGGTGT 60.472 55.000 0.00 7.80 46.82 4.16
148 149 0.688487 TTACTCCCTTTGTCCGGGTG 59.312 55.000 0.00 0.00 42.56 4.61
149 150 1.665137 ATTACTCCCTTTGTCCGGGT 58.335 50.000 0.00 0.00 42.56 5.28
150 151 2.801077 AATTACTCCCTTTGTCCGGG 57.199 50.000 0.00 0.00 43.38 5.73
151 152 4.840271 ACTTAATTACTCCCTTTGTCCGG 58.160 43.478 0.00 0.00 0.00 5.14
152 153 6.653740 AGAAACTTAATTACTCCCTTTGTCCG 59.346 38.462 0.00 0.00 0.00 4.79
153 154 7.883833 AGAGAAACTTAATTACTCCCTTTGTCC 59.116 37.037 0.00 0.00 0.00 4.02
154 155 8.850007 AGAGAAACTTAATTACTCCCTTTGTC 57.150 34.615 0.00 0.00 0.00 3.18
155 156 9.945904 CTAGAGAAACTTAATTACTCCCTTTGT 57.054 33.333 0.00 0.00 0.00 2.83
159 160 9.716556 TCATCTAGAGAAACTTAATTACTCCCT 57.283 33.333 0.00 0.00 0.00 4.20
168 169 8.147058 GCCTCATCATCATCTAGAGAAACTTAA 58.853 37.037 0.00 0.00 0.00 1.85
169 170 7.522889 CGCCTCATCATCATCTAGAGAAACTTA 60.523 40.741 0.00 0.00 0.00 2.24
170 171 6.523840 GCCTCATCATCATCTAGAGAAACTT 58.476 40.000 0.00 0.00 0.00 2.66
171 172 5.278907 CGCCTCATCATCATCTAGAGAAACT 60.279 44.000 0.00 0.00 0.00 2.66
172 173 4.922692 CGCCTCATCATCATCTAGAGAAAC 59.077 45.833 0.00 0.00 0.00 2.78
173 174 4.560311 GCGCCTCATCATCATCTAGAGAAA 60.560 45.833 0.00 0.00 0.00 2.52
174 175 3.056962 GCGCCTCATCATCATCTAGAGAA 60.057 47.826 0.00 0.00 0.00 2.87
175 176 2.491298 GCGCCTCATCATCATCTAGAGA 59.509 50.000 0.00 0.00 0.00 3.10
176 177 2.417107 GGCGCCTCATCATCATCTAGAG 60.417 54.545 22.15 0.00 0.00 2.43
177 178 1.547820 GGCGCCTCATCATCATCTAGA 59.452 52.381 22.15 0.00 0.00 2.43
178 179 1.735038 CGGCGCCTCATCATCATCTAG 60.735 57.143 26.68 0.00 0.00 2.43
179 180 0.244721 CGGCGCCTCATCATCATCTA 59.755 55.000 26.68 0.00 0.00 1.98
180 181 1.005275 CGGCGCCTCATCATCATCT 60.005 57.895 26.68 0.00 0.00 2.90
181 182 2.031516 CCGGCGCCTCATCATCATC 61.032 63.158 26.68 0.00 0.00 2.92
182 183 2.031616 CCGGCGCCTCATCATCAT 59.968 61.111 26.68 0.00 0.00 2.45
183 184 3.469970 ACCGGCGCCTCATCATCA 61.470 61.111 26.68 0.00 0.00 3.07
184 185 2.969238 CACCGGCGCCTCATCATC 60.969 66.667 26.68 0.00 0.00 2.92
185 186 3.451556 CTCACCGGCGCCTCATCAT 62.452 63.158 26.68 0.00 0.00 2.45
186 187 4.147449 CTCACCGGCGCCTCATCA 62.147 66.667 26.68 3.14 0.00 3.07
187 188 2.685387 CTACTCACCGGCGCCTCATC 62.685 65.000 26.68 0.00 0.00 2.92
188 189 2.758327 TACTCACCGGCGCCTCAT 60.758 61.111 26.68 6.49 0.00 2.90
189 190 3.449227 CTACTCACCGGCGCCTCA 61.449 66.667 26.68 3.94 0.00 3.86
190 191 3.412879 GACTACTCACCGGCGCCTC 62.413 68.421 26.68 7.93 0.00 4.70
191 192 3.450115 GACTACTCACCGGCGCCT 61.450 66.667 26.68 6.90 0.00 5.52
192 193 4.849329 CGACTACTCACCGGCGCC 62.849 72.222 19.07 19.07 0.00 6.53
193 194 3.621892 AACGACTACTCACCGGCGC 62.622 63.158 0.00 0.00 0.00 6.53
194 195 1.800315 CAACGACTACTCACCGGCG 60.800 63.158 0.00 0.00 0.00 6.46
195 196 2.092882 GCAACGACTACTCACCGGC 61.093 63.158 0.00 0.00 0.00 6.13
196 197 1.800315 CGCAACGACTACTCACCGG 60.800 63.158 0.00 0.00 0.00 5.28
197 198 0.662374 AACGCAACGACTACTCACCG 60.662 55.000 0.00 0.00 0.00 4.94
198 199 1.494824 AAACGCAACGACTACTCACC 58.505 50.000 0.00 0.00 0.00 4.02
199 200 2.090195 GCTAAACGCAACGACTACTCAC 59.910 50.000 0.00 0.00 38.92 3.51
200 201 2.322161 GCTAAACGCAACGACTACTCA 58.678 47.619 0.00 0.00 38.92 3.41
212 213 3.497031 GTCCGGCCTGCTAAACGC 61.497 66.667 0.00 0.00 39.77 4.84
213 214 2.818274 GGTCCGGCCTGCTAAACG 60.818 66.667 0.00 0.00 0.00 3.60
214 215 2.038837 GTGGTCCGGCCTGCTAAAC 61.039 63.158 14.76 0.00 38.35 2.01
215 216 2.349755 GTGGTCCGGCCTGCTAAA 59.650 61.111 14.76 0.00 38.35 1.85
216 217 4.077184 CGTGGTCCGGCCTGCTAA 62.077 66.667 14.76 0.00 38.35 3.09
217 218 3.942377 TACGTGGTCCGGCCTGCTA 62.942 63.158 14.76 0.85 42.24 3.49
219 220 4.382320 TTACGTGGTCCGGCCTGC 62.382 66.667 14.76 7.83 42.24 4.85
220 221 2.433664 GTTACGTGGTCCGGCCTG 60.434 66.667 14.76 10.19 42.24 4.85
221 222 2.288025 ATGTTACGTGGTCCGGCCT 61.288 57.895 14.76 0.00 42.24 5.19
222 223 2.104253 CATGTTACGTGGTCCGGCC 61.104 63.158 0.00 1.41 42.24 6.13
223 224 1.375013 ACATGTTACGTGGTCCGGC 60.375 57.895 9.52 0.00 42.24 6.13
224 225 1.632046 GCACATGTTACGTGGTCCGG 61.632 60.000 9.52 0.00 42.24 5.14
225 226 0.946700 TGCACATGTTACGTGGTCCG 60.947 55.000 9.52 0.00 44.03 4.79
226 227 0.515564 GTGCACATGTTACGTGGTCC 59.484 55.000 13.17 0.00 34.85 4.46
227 228 0.162933 CGTGCACATGTTACGTGGTC 59.837 55.000 18.64 0.99 34.85 4.02
228 229 2.230892 CGTGCACATGTTACGTGGT 58.769 52.632 18.64 0.00 34.85 4.16
232 233 1.054574 ACGTACGTGCACATGTTACG 58.945 50.000 22.14 24.35 42.98 3.18
233 234 1.387756 GGACGTACGTGCACATGTTAC 59.612 52.381 31.41 11.01 36.45 2.50
234 235 1.000496 TGGACGTACGTGCACATGTTA 60.000 47.619 34.45 13.63 41.40 2.41
235 236 0.249531 TGGACGTACGTGCACATGTT 60.250 50.000 34.45 3.51 41.40 2.71
236 237 1.364536 TGGACGTACGTGCACATGT 59.635 52.632 34.45 9.78 41.40 3.21
237 238 4.253442 TGGACGTACGTGCACATG 57.747 55.556 34.45 6.24 41.40 3.21
241 242 4.345962 CCGGTGGACGTACGTGCA 62.346 66.667 34.45 34.45 43.94 4.57
243 244 4.345962 TGCCGGTGGACGTACGTG 62.346 66.667 28.16 11.36 42.24 4.49
244 245 4.347453 GTGCCGGTGGACGTACGT 62.347 66.667 23.04 23.04 42.24 3.57
246 247 4.747529 GGGTGCCGGTGGACGTAC 62.748 72.222 1.90 0.00 42.24 3.67
255 256 4.323477 TTCGTTCCAGGGTGCCGG 62.323 66.667 0.00 0.00 0.00 6.13
256 257 3.047877 GTTCGTTCCAGGGTGCCG 61.048 66.667 0.00 0.00 0.00 5.69
257 258 1.671379 GAGTTCGTTCCAGGGTGCC 60.671 63.158 0.00 0.00 0.00 5.01
258 259 0.951040 CAGAGTTCGTTCCAGGGTGC 60.951 60.000 0.00 0.00 0.00 5.01
259 260 0.320771 CCAGAGTTCGTTCCAGGGTG 60.321 60.000 0.00 0.00 0.00 4.61
260 261 1.481056 CCCAGAGTTCGTTCCAGGGT 61.481 60.000 0.00 0.00 31.57 4.34
261 262 1.296715 CCCAGAGTTCGTTCCAGGG 59.703 63.158 0.00 0.00 0.00 4.45
262 263 1.296715 CCCCAGAGTTCGTTCCAGG 59.703 63.158 0.00 0.00 0.00 4.45
263 264 1.376037 GCCCCAGAGTTCGTTCCAG 60.376 63.158 0.00 0.00 0.00 3.86
264 265 2.747686 GCCCCAGAGTTCGTTCCA 59.252 61.111 0.00 0.00 0.00 3.53
265 266 2.434359 CGCCCCAGAGTTCGTTCC 60.434 66.667 0.00 0.00 0.00 3.62
266 267 3.119096 GCGCCCCAGAGTTCGTTC 61.119 66.667 0.00 0.00 0.00 3.95
267 268 3.883744 CTGCGCCCCAGAGTTCGTT 62.884 63.158 4.18 0.00 44.64 3.85
268 269 4.379243 CTGCGCCCCAGAGTTCGT 62.379 66.667 4.18 0.00 44.64 3.85
269 270 4.069232 TCTGCGCCCCAGAGTTCG 62.069 66.667 4.18 0.00 45.44 3.95
282 283 3.896133 CCCATGCATGCGGTCTGC 61.896 66.667 21.69 0.00 46.70 4.26
283 284 2.438975 ACCCATGCATGCGGTCTG 60.439 61.111 25.48 11.45 29.17 3.51
284 285 2.438975 CACCCATGCATGCGGTCT 60.439 61.111 27.29 12.13 31.72 3.85
294 295 1.378882 CCATCCGTTCTGCACCCATG 61.379 60.000 0.00 0.00 0.00 3.66
295 296 1.077501 CCATCCGTTCTGCACCCAT 60.078 57.895 0.00 0.00 0.00 4.00
296 297 2.184020 CTCCATCCGTTCTGCACCCA 62.184 60.000 0.00 0.00 0.00 4.51
297 298 1.450312 CTCCATCCGTTCTGCACCC 60.450 63.158 0.00 0.00 0.00 4.61
298 299 2.109126 GCTCCATCCGTTCTGCACC 61.109 63.158 0.00 0.00 0.00 5.01
299 300 2.456119 CGCTCCATCCGTTCTGCAC 61.456 63.158 0.00 0.00 0.00 4.57
300 301 1.960040 ATCGCTCCATCCGTTCTGCA 61.960 55.000 0.00 0.00 0.00 4.41
301 302 1.218230 GATCGCTCCATCCGTTCTGC 61.218 60.000 0.00 0.00 0.00 4.26
302 303 0.598680 GGATCGCTCCATCCGTTCTG 60.599 60.000 0.00 0.00 41.64 3.02
303 304 1.742768 GGATCGCTCCATCCGTTCT 59.257 57.895 0.00 0.00 41.64 3.01
304 305 4.345337 GGATCGCTCCATCCGTTC 57.655 61.111 0.00 0.00 41.64 3.95
308 309 4.688966 GCCCGGATCGCTCCATCC 62.689 72.222 0.73 0.00 42.19 3.51
352 353 3.315949 TACCACCACACCTCGGCC 61.316 66.667 0.00 0.00 0.00 6.13
353 354 2.047560 GTACCACCACACCTCGGC 60.048 66.667 0.00 0.00 0.00 5.54
354 355 2.209064 CTCGTACCACCACACCTCGG 62.209 65.000 0.00 0.00 0.00 4.63
355 356 1.211969 CTCGTACCACCACACCTCG 59.788 63.158 0.00 0.00 0.00 4.63
356 357 1.590147 CCTCGTACCACCACACCTC 59.410 63.158 0.00 0.00 0.00 3.85
357 358 1.911766 CCCTCGTACCACCACACCT 60.912 63.158 0.00 0.00 0.00 4.00
358 359 1.885163 CTCCCTCGTACCACCACACC 61.885 65.000 0.00 0.00 0.00 4.16
359 360 1.590147 CTCCCTCGTACCACCACAC 59.410 63.158 0.00 0.00 0.00 3.82
360 361 1.608336 CCTCCCTCGTACCACCACA 60.608 63.158 0.00 0.00 0.00 4.17
361 362 2.356780 CCCTCCCTCGTACCACCAC 61.357 68.421 0.00 0.00 0.00 4.16
362 363 2.038329 CCCTCCCTCGTACCACCA 59.962 66.667 0.00 0.00 0.00 4.17
363 364 0.906282 TTTCCCTCCCTCGTACCACC 60.906 60.000 0.00 0.00 0.00 4.61
364 365 0.248565 GTTTCCCTCCCTCGTACCAC 59.751 60.000 0.00 0.00 0.00 4.16
365 366 1.252904 CGTTTCCCTCCCTCGTACCA 61.253 60.000 0.00 0.00 0.00 3.25
366 367 1.514553 CGTTTCCCTCCCTCGTACC 59.485 63.158 0.00 0.00 0.00 3.34
367 368 1.153686 GCGTTTCCCTCCCTCGTAC 60.154 63.158 0.00 0.00 0.00 3.67
368 369 2.703798 CGCGTTTCCCTCCCTCGTA 61.704 63.158 0.00 0.00 0.00 3.43
369 370 4.065281 CGCGTTTCCCTCCCTCGT 62.065 66.667 0.00 0.00 0.00 4.18
370 371 2.775032 TTTCGCGTTTCCCTCCCTCG 62.775 60.000 5.77 0.00 0.00 4.63
371 372 1.004200 TTTCGCGTTTCCCTCCCTC 60.004 57.895 5.77 0.00 0.00 4.30
372 373 1.003718 CTTTCGCGTTTCCCTCCCT 60.004 57.895 5.77 0.00 0.00 4.20
373 374 2.038837 CCTTTCGCGTTTCCCTCCC 61.039 63.158 5.77 0.00 0.00 4.30
374 375 2.687805 GCCTTTCGCGTTTCCCTCC 61.688 63.158 5.77 0.00 0.00 4.30
375 376 1.305930 ATGCCTTTCGCGTTTCCCTC 61.306 55.000 5.77 0.00 42.08 4.30
376 377 0.893727 AATGCCTTTCGCGTTTCCCT 60.894 50.000 5.77 0.00 44.59 4.20
377 378 0.732538 CAATGCCTTTCGCGTTTCCC 60.733 55.000 5.77 0.00 44.59 3.97
378 379 0.732538 CCAATGCCTTTCGCGTTTCC 60.733 55.000 5.77 0.00 44.59 3.13
379 380 1.344226 GCCAATGCCTTTCGCGTTTC 61.344 55.000 5.77 0.00 44.59 2.78
380 381 1.372872 GCCAATGCCTTTCGCGTTT 60.373 52.632 5.77 0.00 44.59 3.60
382 383 4.101790 CGCCAATGCCTTTCGCGT 62.102 61.111 5.77 0.00 42.08 6.01
384 385 2.504681 CACGCCAATGCCTTTCGC 60.505 61.111 0.00 0.00 38.31 4.70
385 386 2.179018 CCACGCCAATGCCTTTCG 59.821 61.111 0.00 0.00 0.00 3.46
386 387 1.244019 ACTCCACGCCAATGCCTTTC 61.244 55.000 0.00 0.00 0.00 2.62
387 388 1.228552 ACTCCACGCCAATGCCTTT 60.229 52.632 0.00 0.00 0.00 3.11
388 389 1.973281 CACTCCACGCCAATGCCTT 60.973 57.895 0.00 0.00 0.00 4.35
389 390 2.360350 CACTCCACGCCAATGCCT 60.360 61.111 0.00 0.00 0.00 4.75
390 391 4.120331 GCACTCCACGCCAATGCC 62.120 66.667 0.00 0.00 0.00 4.40
391 392 3.058160 AGCACTCCACGCCAATGC 61.058 61.111 0.00 0.00 36.52 3.56
392 393 2.872557 CAGCACTCCACGCCAATG 59.127 61.111 0.00 0.00 0.00 2.82
393 394 3.058160 GCAGCACTCCACGCCAAT 61.058 61.111 0.00 0.00 0.00 3.16
422 423 4.738998 TTCCCTGGTGCATGGGCG 62.739 66.667 15.08 2.51 45.35 6.13
423 424 2.042639 ATTCCCTGGTGCATGGGC 60.043 61.111 15.08 0.00 43.04 5.36
424 425 1.000739 ACATTCCCTGGTGCATGGG 59.999 57.895 14.07 14.07 44.66 4.00
425 426 1.324740 CCACATTCCCTGGTGCATGG 61.325 60.000 0.00 0.00 33.72 3.66
426 427 1.324740 CCCACATTCCCTGGTGCATG 61.325 60.000 0.00 0.00 33.72 4.06
427 428 1.000739 CCCACATTCCCTGGTGCAT 59.999 57.895 0.00 0.00 33.72 3.96
428 429 2.017668 AACCCACATTCCCTGGTGCA 62.018 55.000 0.00 0.00 33.72 4.57
429 430 1.228862 AACCCACATTCCCTGGTGC 60.229 57.895 0.00 0.00 33.72 5.01
430 431 0.611896 GGAACCCACATTCCCTGGTG 60.612 60.000 0.00 0.00 42.16 4.17
431 432 1.774300 GGAACCCACATTCCCTGGT 59.226 57.895 0.00 0.00 42.16 4.00
432 433 1.378514 CGGAACCCACATTCCCTGG 60.379 63.158 0.00 0.00 44.72 4.45
433 434 0.960364 CACGGAACCCACATTCCCTG 60.960 60.000 0.00 0.00 44.72 4.45
434 435 1.378762 CACGGAACCCACATTCCCT 59.621 57.895 0.00 0.00 44.72 4.20
435 436 1.677633 CCACGGAACCCACATTCCC 60.678 63.158 0.00 0.00 44.72 3.97
436 437 2.340328 GCCACGGAACCCACATTCC 61.340 63.158 0.00 0.00 44.19 3.01
437 438 2.340328 GGCCACGGAACCCACATTC 61.340 63.158 0.00 0.00 0.00 2.67
438 439 2.282887 GGCCACGGAACCCACATT 60.283 61.111 0.00 0.00 0.00 2.71
439 440 3.567579 CTGGCCACGGAACCCACAT 62.568 63.158 0.00 0.00 0.00 3.21
440 441 4.263572 CTGGCCACGGAACCCACA 62.264 66.667 0.00 0.00 0.00 4.17
443 444 4.410400 CTCCTGGCCACGGAACCC 62.410 72.222 20.24 0.00 0.00 4.11
444 445 4.410400 CCTCCTGGCCACGGAACC 62.410 72.222 20.24 0.00 0.00 3.62
445 446 3.316573 CTCCTCCTGGCCACGGAAC 62.317 68.421 20.24 0.00 0.00 3.62
446 447 3.003173 CTCCTCCTGGCCACGGAA 61.003 66.667 20.24 9.42 0.00 4.30
453 454 3.934962 GATCGGGCTCCTCCTGGC 61.935 72.222 0.00 0.00 41.78 4.85
454 455 2.444706 TGATCGGGCTCCTCCTGG 60.445 66.667 0.00 0.00 41.78 4.45
455 456 2.506061 CCTGATCGGGCTCCTCCTG 61.506 68.421 7.89 0.00 42.90 3.86
456 457 2.123077 CCTGATCGGGCTCCTCCT 60.123 66.667 7.89 0.00 34.39 3.69
457 458 2.123251 TCCTGATCGGGCTCCTCC 60.123 66.667 16.48 0.00 0.00 4.30
458 459 2.503382 GGTCCTGATCGGGCTCCTC 61.503 68.421 16.48 3.74 37.61 3.71
459 460 2.444895 GGTCCTGATCGGGCTCCT 60.445 66.667 16.48 0.00 37.61 3.69
460 461 2.105806 GATGGTCCTGATCGGGCTCC 62.106 65.000 16.48 19.10 37.61 4.70
461 462 1.369321 GATGGTCCTGATCGGGCTC 59.631 63.158 16.48 10.91 37.61 4.70
462 463 2.143419 GGATGGTCCTGATCGGGCT 61.143 63.158 16.48 0.07 37.61 5.19
463 464 2.427753 GGATGGTCCTGATCGGGC 59.572 66.667 16.48 10.78 36.34 6.13
464 465 2.088674 GACGGATGGTCCTGATCGGG 62.089 65.000 15.09 15.09 39.90 5.14
465 466 1.364171 GACGGATGGTCCTGATCGG 59.636 63.158 0.00 0.00 39.90 4.18
473 474 3.407046 GACGGACGGACGGATGGTC 62.407 68.421 6.00 0.00 45.31 4.02
474 475 3.446570 GACGGACGGACGGATGGT 61.447 66.667 6.00 0.00 38.39 3.55
475 476 4.203076 GGACGGACGGACGGATGG 62.203 72.222 6.00 0.00 38.39 3.51
476 477 4.203076 GGGACGGACGGACGGATG 62.203 72.222 6.00 0.00 38.39 3.51
489 490 2.558380 GATTCACCTGGCCTGGGGAC 62.558 65.000 31.78 18.40 39.59 4.46
490 491 2.204291 ATTCACCTGGCCTGGGGA 60.204 61.111 28.66 28.66 37.83 4.81
491 492 2.276740 GATTCACCTGGCCTGGGG 59.723 66.667 30.19 27.62 0.00 4.96
492 493 2.276740 GGATTCACCTGGCCTGGG 59.723 66.667 30.19 21.31 35.41 4.45
493 494 2.124570 CGGATTCACCTGGCCTGG 60.125 66.667 26.14 26.14 36.31 4.45
494 495 1.746615 CACGGATTCACCTGGCCTG 60.747 63.158 3.32 2.54 36.31 4.85
495 496 2.671070 CACGGATTCACCTGGCCT 59.329 61.111 3.32 0.00 36.31 5.19
496 497 2.438434 CCACGGATTCACCTGGCC 60.438 66.667 0.00 0.00 36.31 5.36
497 498 3.134127 GCCACGGATTCACCTGGC 61.134 66.667 0.00 0.00 46.79 4.85
498 499 2.819595 CGCCACGGATTCACCTGG 60.820 66.667 0.00 0.00 38.82 4.45
499 500 3.499737 GCGCCACGGATTCACCTG 61.500 66.667 0.00 0.00 36.31 4.00
500 501 4.778143 GGCGCCACGGATTCACCT 62.778 66.667 24.80 0.00 36.31 4.00
502 503 3.499737 CTGGCGCCACGGATTCAC 61.500 66.667 29.03 0.00 0.00 3.18
503 504 4.776322 CCTGGCGCCACGGATTCA 62.776 66.667 30.14 8.70 0.00 2.57
521 522 4.048470 GTGGACCCCTGCCCCTTC 62.048 72.222 0.00 0.00 0.00 3.46
569 570 3.901797 AAGGAAGGAGGCGGTTGCG 62.902 63.158 0.00 0.00 44.10 4.85
570 571 2.034221 AAGGAAGGAGGCGGTTGC 59.966 61.111 0.00 0.00 41.71 4.17
571 572 1.675641 CCAAGGAAGGAGGCGGTTG 60.676 63.158 0.00 0.00 0.00 3.77
572 573 2.757077 CCAAGGAAGGAGGCGGTT 59.243 61.111 0.00 0.00 0.00 4.44
573 574 4.035102 GCCAAGGAAGGAGGCGGT 62.035 66.667 0.00 0.00 38.86 5.68
577 578 2.586792 CTCGGCCAAGGAAGGAGG 59.413 66.667 2.24 0.00 0.00 4.30
578 579 2.586792 CCTCGGCCAAGGAAGGAG 59.413 66.667 2.44 0.00 38.87 3.69
579 580 3.717294 GCCTCGGCCAAGGAAGGA 61.717 66.667 16.09 0.00 38.87 3.36
580 581 3.689002 GAGCCTCGGCCAAGGAAGG 62.689 68.421 16.09 7.35 43.17 3.46
581 582 2.124942 GAGCCTCGGCCAAGGAAG 60.125 66.667 16.09 0.00 43.17 3.46
582 583 4.082523 CGAGCCTCGGCCAAGGAA 62.083 66.667 16.09 0.00 43.17 3.36
584 585 4.521062 CTCGAGCCTCGGCCAAGG 62.521 72.222 15.08 4.93 40.88 3.61
585 586 3.423162 CTCTCGAGCCTCGGCCAAG 62.423 68.421 15.08 4.16 40.88 3.61
586 587 3.452786 CTCTCGAGCCTCGGCCAA 61.453 66.667 15.08 0.00 40.88 4.52
587 588 4.426313 TCTCTCGAGCCTCGGCCA 62.426 66.667 15.08 0.00 40.88 5.36
588 589 3.591835 CTCTCTCGAGCCTCGGCC 61.592 72.222 15.08 0.00 40.88 6.13
589 590 1.896660 ATCTCTCTCGAGCCTCGGC 60.897 63.158 15.08 0.00 40.88 5.54
590 591 1.948508 CATCTCTCTCGAGCCTCGG 59.051 63.158 15.08 5.27 40.88 4.63
591 592 1.282570 GCATCTCTCTCGAGCCTCG 59.717 63.158 8.05 8.05 42.10 4.63
592 593 1.659794 GGCATCTCTCTCGAGCCTC 59.340 63.158 7.81 0.00 42.01 4.70
593 594 3.854856 GGCATCTCTCTCGAGCCT 58.145 61.111 7.81 0.00 42.01 4.58
594 595 1.659794 GAGGCATCTCTCTCGAGCC 59.340 63.158 7.81 4.28 45.54 4.70
595 596 1.659794 GGAGGCATCTCTCTCGAGC 59.340 63.158 7.81 0.00 39.86 5.03
596 597 1.948508 CGGAGGCATCTCTCTCGAG 59.051 63.158 5.93 5.93 39.86 4.04
597 598 2.190170 GCGGAGGCATCTCTCTCGA 61.190 63.158 0.00 0.00 39.86 4.04
598 599 2.334653 GCGGAGGCATCTCTCTCG 59.665 66.667 0.00 0.00 39.86 4.04
599 600 2.334653 CGCGGAGGCATCTCTCTC 59.665 66.667 0.00 0.00 39.86 3.20
600 601 3.910490 GCGCGGAGGCATCTCTCT 61.910 66.667 8.83 0.00 39.86 3.10
616 617 4.060038 ATGCAACTGCCAAGGCGC 62.060 61.111 6.60 0.00 45.51 6.53
617 618 2.126228 CATGCAACTGCCAAGGCG 60.126 61.111 6.60 4.13 45.51 5.52
618 619 1.080298 GACATGCAACTGCCAAGGC 60.080 57.895 3.61 3.61 41.18 4.35
619 620 1.210931 CGACATGCAACTGCCAAGG 59.789 57.895 0.00 0.00 41.18 3.61
620 621 0.110056 GTCGACATGCAACTGCCAAG 60.110 55.000 11.55 0.00 41.18 3.61
621 622 1.514678 GGTCGACATGCAACTGCCAA 61.515 55.000 18.91 0.00 41.18 4.52
622 623 1.965930 GGTCGACATGCAACTGCCA 60.966 57.895 18.91 0.00 41.18 4.92
623 624 1.672356 AGGTCGACATGCAACTGCC 60.672 57.895 18.91 0.00 41.18 4.85
624 625 0.950555 TCAGGTCGACATGCAACTGC 60.951 55.000 24.59 0.00 42.50 4.40
625 626 1.073964 CTCAGGTCGACATGCAACTG 58.926 55.000 24.59 16.62 0.00 3.16
626 627 0.681733 ACTCAGGTCGACATGCAACT 59.318 50.000 24.59 4.59 0.00 3.16
627 628 1.195448 CAACTCAGGTCGACATGCAAC 59.805 52.381 24.59 2.03 0.00 4.17
628 629 1.511850 CAACTCAGGTCGACATGCAA 58.488 50.000 24.59 8.34 0.00 4.08
629 630 0.950555 GCAACTCAGGTCGACATGCA 60.951 55.000 24.59 12.76 32.69 3.96
630 631 1.639298 GGCAACTCAGGTCGACATGC 61.639 60.000 24.59 18.09 31.98 4.06
631 632 0.320683 TGGCAACTCAGGTCGACATG 60.321 55.000 23.54 23.54 37.61 3.21
632 633 0.615331 ATGGCAACTCAGGTCGACAT 59.385 50.000 18.91 7.60 37.61 3.06
637 638 3.068024 TGAAACAAATGGCAACTCAGGTC 59.932 43.478 0.00 0.00 37.61 3.85
731 732 8.417106 TGAACAAAGCATGGTAAATTCTGTTTA 58.583 29.630 0.00 0.00 0.00 2.01
812 813 0.675208 TTTGCTAATTCTCGCCCGCA 60.675 50.000 0.00 0.00 0.00 5.69
813 814 0.450184 TTTTGCTAATTCTCGCCCGC 59.550 50.000 0.00 0.00 0.00 6.13
858 906 1.675641 AAGATCAGGGTTGCCACGC 60.676 57.895 0.00 0.00 36.07 5.34
888 1200 0.110056 CAGTGCGCATTCAGGTTCAC 60.110 55.000 15.91 0.00 0.00 3.18
895 1207 2.741985 CGGGTCAGTGCGCATTCA 60.742 61.111 15.91 0.00 0.00 2.57
896 1208 4.166011 GCGGGTCAGTGCGCATTC 62.166 66.667 15.91 0.17 0.00 2.67
925 1237 2.342279 CTGGGAGCGTTCGGTTCA 59.658 61.111 5.11 3.81 0.00 3.18
927 1239 2.920912 TCCTGGGAGCGTTCGGTT 60.921 61.111 0.00 0.00 0.00 4.44
928 1240 3.692406 GTCCTGGGAGCGTTCGGT 61.692 66.667 0.00 0.00 0.00 4.69
929 1241 3.691342 TGTCCTGGGAGCGTTCGG 61.691 66.667 0.00 0.00 0.00 4.30
930 1242 2.432628 GTGTCCTGGGAGCGTTCG 60.433 66.667 0.00 0.00 0.00 3.95
931 1243 1.079750 GAGTGTCCTGGGAGCGTTC 60.080 63.158 0.00 0.00 0.00 3.95
932 1244 1.194781 ATGAGTGTCCTGGGAGCGTT 61.195 55.000 0.00 0.00 0.00 4.84
933 1245 0.324368 TATGAGTGTCCTGGGAGCGT 60.324 55.000 0.00 0.00 0.00 5.07
934 1246 0.824109 TTATGAGTGTCCTGGGAGCG 59.176 55.000 0.00 0.00 0.00 5.03
935 1247 1.474143 GCTTATGAGTGTCCTGGGAGC 60.474 57.143 0.00 0.00 0.00 4.70
936 1248 1.202463 CGCTTATGAGTGTCCTGGGAG 60.202 57.143 0.00 0.00 0.00 4.30
937 1249 0.824109 CGCTTATGAGTGTCCTGGGA 59.176 55.000 0.00 0.00 0.00 4.37
938 1250 0.179073 CCGCTTATGAGTGTCCTGGG 60.179 60.000 0.00 0.00 0.00 4.45
939 1251 0.811616 GCCGCTTATGAGTGTCCTGG 60.812 60.000 0.00 0.00 0.00 4.45
940 1252 1.148157 CGCCGCTTATGAGTGTCCTG 61.148 60.000 0.00 0.00 0.00 3.86
941 1253 1.141881 CGCCGCTTATGAGTGTCCT 59.858 57.895 0.00 0.00 0.00 3.85
942 1254 1.883084 CCGCCGCTTATGAGTGTCC 60.883 63.158 0.00 0.00 0.00 4.02
943 1255 2.526120 GCCGCCGCTTATGAGTGTC 61.526 63.158 0.00 0.00 0.00 3.67
944 1256 2.511600 GCCGCCGCTTATGAGTGT 60.512 61.111 0.00 0.00 0.00 3.55
945 1257 2.202932 AGCCGCCGCTTATGAGTG 60.203 61.111 0.00 0.00 45.55 3.51
1149 1461 2.975799 GTTGCGAACGAAGGGGCA 60.976 61.111 0.00 0.00 0.00 5.36
1167 1479 4.717313 GGGTTCGGTGGGCACTCC 62.717 72.222 0.00 0.00 0.00 3.85
1203 1517 3.003275 GTCACTGCGAAAATCACCAAGAA 59.997 43.478 0.00 0.00 0.00 2.52
1214 1528 1.301716 GCTCCCTGTCACTGCGAAA 60.302 57.895 0.00 0.00 0.00 3.46
1243 1557 4.147321 CCATACCAAATTGGAGGGATCAG 58.853 47.826 20.25 0.00 40.96 2.90
1284 1598 3.751175 CCGAAAGCCTTTCAGTAACATGA 59.249 43.478 16.87 0.00 39.63 3.07
1291 1605 0.765510 ACCTCCGAAAGCCTTTCAGT 59.234 50.000 16.87 5.81 39.63 3.41
1293 1607 0.320421 CGACCTCCGAAAGCCTTTCA 60.320 55.000 16.87 0.00 41.76 2.69
1441 1784 8.517878 AGATGACAACCTTTCACATTCATTTAG 58.482 33.333 0.00 0.00 0.00 1.85
1522 1868 0.037882 CGCTCCTGTATCCGATGCAT 60.038 55.000 0.00 0.00 0.00 3.96
1562 1908 3.007940 CACCATTCTGTCCCAGTTGAGTA 59.992 47.826 0.00 0.00 32.61 2.59
1592 1938 2.655090 TGCTTCCCATGACAACTTGA 57.345 45.000 0.00 0.00 0.00 3.02
1639 1985 1.203994 GCACTCCGCTGTCCTTACTAA 59.796 52.381 0.00 0.00 37.77 2.24
1696 2042 4.848562 TCAGCTCGTTTTCTCTTACTCA 57.151 40.909 0.00 0.00 0.00 3.41
1709 2055 1.884075 TAACCACGCCATCAGCTCGT 61.884 55.000 0.00 0.00 40.39 4.18
1712 2058 2.170607 AGTAATAACCACGCCATCAGCT 59.829 45.455 0.00 0.00 40.39 4.24
1722 2068 3.181468 CCCTCCTCCGAAGTAATAACCAC 60.181 52.174 0.00 0.00 0.00 4.16
1790 2136 1.129811 GCACGAACTTTGTTATCCCCG 59.870 52.381 0.00 0.00 0.00 5.73
1837 2183 5.009631 CAGTCATTACCTTGTCCAATTGGA 58.990 41.667 23.63 23.63 43.08 3.53
1841 2187 6.323739 ACAAAACAGTCATTACCTTGTCCAAT 59.676 34.615 0.00 0.00 0.00 3.16
1979 2325 6.159988 CCTCAATAAGCCTAGACTTAATCCG 58.840 44.000 2.39 0.00 35.82 4.18
2092 2438 8.961092 GTCATGACGAAAATTTGATATTCCATG 58.039 33.333 10.69 0.00 30.54 3.66
2150 2497 5.127491 TCCAAAATACTTGTCGTGGTTTCT 58.873 37.500 0.00 0.00 0.00 2.52
2151 2498 5.427036 TCCAAAATACTTGTCGTGGTTTC 57.573 39.130 0.00 0.00 0.00 2.78
2251 2601 5.278169 CCTCAATAAATGGAAAGGAGATGCG 60.278 44.000 0.00 0.00 0.00 4.73
2252 2602 5.508657 GCCTCAATAAATGGAAAGGAGATGC 60.509 44.000 0.00 0.00 0.00 3.91
2493 2843 7.508977 AGCTAGGTATAGAAAGCTTCTCTCAAT 59.491 37.037 12.51 6.73 42.52 2.57
2745 3096 2.035961 TCTCAACTGGTCCTTGAGAACG 59.964 50.000 17.22 0.00 46.87 3.95
2776 3127 9.847224 TCTAGAAGGTAAAAATCCAATGTATCC 57.153 33.333 0.00 0.00 0.00 2.59
2968 3319 7.385752 CGGTCACTTGTTATAAAAGAGTAACCA 59.614 37.037 13.08 0.00 31.42 3.67
2984 3335 1.692519 AGTTAAGAGCCGGTCACTTGT 59.307 47.619 15.13 2.19 0.00 3.16
2993 3344 6.937436 ATTGGGTTAAATAGTTAAGAGCCG 57.063 37.500 0.00 0.00 29.74 5.52
3060 3411 8.677300 GGACTTGTTTGATCTTTGCTAATATCA 58.323 33.333 5.14 5.14 0.00 2.15
3068 3419 4.919754 GTCATGGACTTGTTTGATCTTTGC 59.080 41.667 0.00 0.00 0.00 3.68
3091 3442 0.666274 CAATGGCAGCTGCACAGTTG 60.666 55.000 37.63 28.24 44.36 3.16
3106 3457 8.081633 TGAAGGTTTGTTTGTAGCTTATCAATG 58.918 33.333 0.00 0.00 32.68 2.82
3229 3580 0.804989 ACTCATTTGTAAGCCGCAGC 59.195 50.000 0.00 0.00 40.32 5.25
3394 3745 1.691196 CTCCCTTCTGCACCAAACAA 58.309 50.000 0.00 0.00 0.00 2.83
3397 3748 1.536180 TGCTCCCTTCTGCACCAAA 59.464 52.632 0.00 0.00 33.94 3.28
3406 3757 2.596904 TAGTTATGCGTGCTCCCTTC 57.403 50.000 0.00 0.00 0.00 3.46
3437 3788 7.315142 CACCATAAGTTTACTTGCAATGATGT 58.685 34.615 0.00 0.00 37.40 3.06
3438 3789 6.254157 GCACCATAAGTTTACTTGCAATGATG 59.746 38.462 0.00 0.60 37.40 3.07
3577 3931 6.548622 ACATCCTCATTGCAGCATAATTAAGT 59.451 34.615 0.00 0.00 0.00 2.24
3650 4004 7.429340 CGAATTTAGCCATGTAAAGTCATCAAC 59.571 37.037 13.39 0.00 37.00 3.18
3655 4009 5.064707 GCTCGAATTTAGCCATGTAAAGTCA 59.935 40.000 13.39 4.14 37.00 3.41
3763 4117 2.035155 GGGTTCCGGAACTTGGGG 59.965 66.667 38.59 0.00 40.94 4.96
3934 4288 1.948104 TCTCACCACAGGTTTTGACG 58.052 50.000 0.00 0.00 31.02 4.35
3976 4330 6.572509 CGATAAGAGGGTTTGAGAAGTTGAGA 60.573 42.308 0.00 0.00 0.00 3.27
4009 4363 0.516877 CACATGCACGTCGGTCAAAT 59.483 50.000 0.00 0.00 0.00 2.32
4256 4614 8.322091 AGCTCCAACATAGTTCAGTACTTAAAT 58.678 33.333 0.00 0.00 38.33 1.40
4265 4625 4.199432 ACTCAGCTCCAACATAGTTCAG 57.801 45.455 0.00 0.00 0.00 3.02
4294 4674 4.222810 TGGCAAGAGTAGAACAGAATAGCA 59.777 41.667 0.00 0.00 0.00 3.49
4328 4709 4.038282 TGCAGAATGAGAAACATGTGCTTT 59.962 37.500 0.00 0.00 43.91 3.51
4332 4713 5.366829 TTCTGCAGAATGAGAAACATGTG 57.633 39.130 25.16 0.00 39.69 3.21
4483 4864 0.900182 TGCAGCCCGATCGATATCCT 60.900 55.000 18.66 1.96 0.00 3.24
4493 4874 1.218047 GTGTATGACTGCAGCCCGA 59.782 57.895 15.27 0.00 0.00 5.14
4564 4945 7.065803 CGAAAATGACATACTTGGACCAGTAAT 59.934 37.037 0.00 0.00 32.90 1.89
4602 4983 3.467803 GATGTATGTGGCACTCCCTTAC 58.532 50.000 19.83 12.29 0.00 2.34
4625 5006 1.580845 ATTCCGCAGCAGCAACTCAC 61.581 55.000 0.82 0.00 42.27 3.51
4656 5037 1.980765 ACCTGAAACCATCTCAGCAGA 59.019 47.619 0.00 0.00 39.23 4.26
4695 5076 1.480954 TGGATACCAAGGAAGAGACGC 59.519 52.381 0.00 0.00 0.00 5.19
4696 5077 2.496070 TGTGGATACCAAGGAAGAGACG 59.504 50.000 0.00 0.00 34.18 4.18
4697 5078 4.762289 ATGTGGATACCAAGGAAGAGAC 57.238 45.455 0.00 0.00 34.18 3.36
4714 5095 5.727791 GCAAACCAACGCTCTAGATAATGTG 60.728 44.000 0.00 0.00 0.00 3.21
4808 5191 3.580458 AGATTTGACCTCTACAGCACTGT 59.420 43.478 8.57 8.57 46.87 3.55
4822 5205 7.964604 AGAACAAACCTACTACAGATTTGAC 57.035 36.000 0.00 0.00 34.93 3.18
4850 5241 3.604582 AGCAGTAGCATCAGAAAGAACC 58.395 45.455 0.00 0.00 45.49 3.62
4893 5284 6.233905 AGGGTTGACAAACAAAAGCTAATT 57.766 33.333 5.42 0.00 40.36 1.40
4904 5295 5.449999 CCAAACAGAACTAGGGTTGACAAAC 60.450 44.000 0.00 0.00 35.58 2.93
4906 5297 4.204012 CCAAACAGAACTAGGGTTGACAA 58.796 43.478 0.00 0.00 35.58 3.18
4970 5363 4.022849 ACCAGTAGCAAGCAAACTCATTTC 60.023 41.667 0.00 0.00 0.00 2.17
4972 5365 3.490348 ACCAGTAGCAAGCAAACTCATT 58.510 40.909 0.00 0.00 0.00 2.57
4975 5368 5.629079 ATTTACCAGTAGCAAGCAAACTC 57.371 39.130 0.00 0.00 0.00 3.01
4977 5370 5.629435 GTGAATTTACCAGTAGCAAGCAAAC 59.371 40.000 0.00 0.00 0.00 2.93
4978 5371 5.300539 TGTGAATTTACCAGTAGCAAGCAAA 59.699 36.000 0.00 0.00 0.00 3.68
4979 5372 4.824537 TGTGAATTTACCAGTAGCAAGCAA 59.175 37.500 0.00 0.00 0.00 3.91
4988 5381 2.224426 TGAGCGGTGTGAATTTACCAGT 60.224 45.455 0.00 0.00 36.76 4.00
4989 5382 2.422597 TGAGCGGTGTGAATTTACCAG 58.577 47.619 0.00 0.00 36.76 4.00
4990 5383 2.552599 TGAGCGGTGTGAATTTACCA 57.447 45.000 0.00 0.00 36.76 3.25
5032 5655 3.748048 TGTTGCAAGATCTGTTAGACAGC 59.252 43.478 0.00 0.00 45.54 4.40
5050 5673 5.403897 ACGAGTAATGTTTGTGTCTGTTG 57.596 39.130 0.00 0.00 0.00 3.33
5067 5690 5.733620 TTTAGAATGGTGGAGTAACGAGT 57.266 39.130 0.00 0.00 0.00 4.18
5068 5691 6.164176 AGTTTTAGAATGGTGGAGTAACGAG 58.836 40.000 0.00 0.00 0.00 4.18
5070 5693 6.164176 AGAGTTTTAGAATGGTGGAGTAACG 58.836 40.000 0.00 0.00 0.00 3.18
5072 5695 6.271391 TGGAGAGTTTTAGAATGGTGGAGTAA 59.729 38.462 0.00 0.00 0.00 2.24
5075 5698 4.938226 GTGGAGAGTTTTAGAATGGTGGAG 59.062 45.833 0.00 0.00 0.00 3.86
5077 5700 4.010349 GGTGGAGAGTTTTAGAATGGTGG 58.990 47.826 0.00 0.00 0.00 4.61
5078 5701 4.651778 TGGTGGAGAGTTTTAGAATGGTG 58.348 43.478 0.00 0.00 0.00 4.17
5081 5770 4.096984 GCCATGGTGGAGAGTTTTAGAATG 59.903 45.833 14.67 0.00 40.96 2.67
5086 5775 1.707989 TGGCCATGGTGGAGAGTTTTA 59.292 47.619 14.67 0.00 40.96 1.52
5118 5807 5.003590 CGTTACTCGTATTGAAGCTGTCTTC 59.996 44.000 0.00 5.31 40.64 2.87
5160 5849 3.652274 GGTAACGCTGTTGGTTACTGTA 58.348 45.455 12.78 0.00 45.61 2.74
5180 5869 1.062525 GCAGATTAAACCAGCGCGG 59.937 57.895 8.83 15.25 42.50 6.46
5181 5870 0.167908 TTGCAGATTAAACCAGCGCG 59.832 50.000 0.00 0.00 0.00 6.86
5182 5871 1.200020 ACTTGCAGATTAAACCAGCGC 59.800 47.619 0.00 0.00 0.00 5.92
5183 5872 2.483877 TCACTTGCAGATTAAACCAGCG 59.516 45.455 0.00 0.00 0.00 5.18
5184 5873 3.753272 TCTCACTTGCAGATTAAACCAGC 59.247 43.478 0.00 0.00 0.00 4.85
5185 5874 4.756642 TGTCTCACTTGCAGATTAAACCAG 59.243 41.667 0.00 0.00 0.00 4.00
5186 5875 4.515191 GTGTCTCACTTGCAGATTAAACCA 59.485 41.667 0.00 0.00 0.00 3.67
5187 5876 4.377431 CGTGTCTCACTTGCAGATTAAACC 60.377 45.833 0.00 0.00 31.34 3.27
5188 5877 4.377431 CCGTGTCTCACTTGCAGATTAAAC 60.377 45.833 0.00 0.00 31.34 2.01
5189 5878 3.745975 CCGTGTCTCACTTGCAGATTAAA 59.254 43.478 0.00 0.00 31.34 1.52
5190 5879 3.006430 TCCGTGTCTCACTTGCAGATTAA 59.994 43.478 0.00 0.00 31.34 1.40
5202 5891 1.069090 GCAAGGTGTCCGTGTCTCA 59.931 57.895 4.00 0.00 35.50 3.27
5210 5899 4.631813 CAGTATTTGTAGAGCAAGGTGTCC 59.368 45.833 0.00 0.00 38.47 4.02
5249 5938 1.658114 CAATGCTGCTGTGCTGTGT 59.342 52.632 0.00 0.00 0.00 3.72
5330 6025 3.063084 GGAGGACCGAGCACGAGT 61.063 66.667 4.70 0.85 42.66 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.