Multiple sequence alignment - TraesCS7A01G236200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G236200 chr7A 100.000 5627 0 0 1 5627 209168605 209162979 0.000000e+00 10392.0
1 TraesCS7A01G236200 chr7A 95.153 784 37 1 7 789 20161050 20161833 0.000000e+00 1236.0
2 TraesCS7A01G236200 chr7A 81.757 148 18 5 1968 2113 421785162 421785022 1.280000e-21 115.0
3 TraesCS7A01G236200 chr7B 93.905 1854 73 22 2812 4644 163506188 163504354 0.000000e+00 2761.0
4 TraesCS7A01G236200 chr7B 84.890 728 50 21 2106 2799 163506966 163506265 0.000000e+00 680.0
5 TraesCS7A01G236200 chr7B 83.748 523 56 19 841 1354 163509128 163508626 8.540000e-128 468.0
6 TraesCS7A01G236200 chr7B 87.435 382 23 11 1340 1712 163508599 163508234 3.140000e-112 416.0
7 TraesCS7A01G236200 chr7B 93.277 119 8 0 4820 4938 163504340 163504222 5.790000e-40 176.0
8 TraesCS7A01G236200 chr7B 85.714 91 7 3 1828 1915 163507577 163507490 2.160000e-14 91.6
9 TraesCS7A01G236200 chr7D 92.696 1862 77 27 2839 4663 199414052 199412213 0.000000e+00 2630.0
10 TraesCS7A01G236200 chr7D 90.745 886 38 21 838 1707 199416287 199415430 0.000000e+00 1142.0
11 TraesCS7A01G236200 chr7D 84.885 999 76 24 1850 2799 199415342 199414370 0.000000e+00 939.0
12 TraesCS7A01G236200 chr7D 90.534 412 32 3 5220 5627 199411448 199411040 6.410000e-149 538.0
13 TraesCS7A01G236200 chr7D 94.175 206 12 0 4758 4963 199412204 199411999 1.180000e-81 315.0
14 TraesCS7A01G236200 chr7D 82.895 152 16 6 1964 2113 34756859 34757002 1.650000e-25 128.0
15 TraesCS7A01G236200 chr7D 80.405 148 20 5 1968 2113 375400920 375400780 2.770000e-18 104.0
16 TraesCS7A01G236200 chr5D 84.275 1469 190 27 3183 4628 27489691 27488241 0.000000e+00 1395.0
17 TraesCS7A01G236200 chr5D 86.634 1212 151 8 3411 4618 28162699 28163903 0.000000e+00 1330.0
18 TraesCS7A01G236200 chr5D 82.277 1467 224 28 3209 4662 27504327 27502884 0.000000e+00 1236.0
19 TraesCS7A01G236200 chr5D 91.964 112 5 3 4675 4782 277238935 277239046 2.710000e-33 154.0
20 TraesCS7A01G236200 chr5D 93.878 98 6 0 4675 4772 293405678 293405775 1.260000e-31 148.0
21 TraesCS7A01G236200 chr6A 96.547 811 26 2 1 809 600121734 600120924 0.000000e+00 1341.0
22 TraesCS7A01G236200 chr6A 94.177 790 45 1 1 789 590096771 590097560 0.000000e+00 1203.0
23 TraesCS7A01G236200 chr6A 98.765 81 1 0 1711 1791 484569503 484569583 1.630000e-30 145.0
24 TraesCS7A01G236200 chr6A 82.759 145 17 2 1970 2113 555729190 555729327 7.660000e-24 122.0
25 TraesCS7A01G236200 chr5A 82.768 1532 225 28 3148 4662 18814286 18812777 0.000000e+00 1330.0
26 TraesCS7A01G236200 chr5A 95.802 786 31 2 1 784 565491943 565492728 0.000000e+00 1267.0
27 TraesCS7A01G236200 chr5A 93.939 99 5 1 4662 4759 547393427 547393329 1.260000e-31 148.0
28 TraesCS7A01G236200 chr5A 93.878 98 6 0 4675 4772 709722567 709722470 1.260000e-31 148.0
29 TraesCS7A01G236200 chr5A 89.091 110 9 3 1708 1817 561812338 561812444 3.540000e-27 134.0
30 TraesCS7A01G236200 chr5A 85.088 114 16 1 2001 2113 66842392 66842279 1.280000e-21 115.0
31 TraesCS7A01G236200 chr5B 86.077 1221 160 5 3411 4631 20730219 20731429 0.000000e+00 1304.0
32 TraesCS7A01G236200 chr5B 81.675 1397 226 24 3253 4640 20649458 20650833 0.000000e+00 1134.0
33 TraesCS7A01G236200 chr5B 85.275 455 61 5 3411 3862 20154820 20155271 1.100000e-126 464.0
34 TraesCS7A01G236200 chrUn 95.402 783 34 2 1 782 292875753 292874972 0.000000e+00 1245.0
35 TraesCS7A01G236200 chrUn 94.058 791 45 2 1 790 31579345 31580134 0.000000e+00 1199.0
36 TraesCS7A01G236200 chrUn 98.810 84 1 0 1708 1791 394816395 394816478 3.510000e-32 150.0
37 TraesCS7A01G236200 chrUn 97.647 85 2 0 1708 1792 17061959 17061875 4.540000e-31 147.0
38 TraesCS7A01G236200 chrUn 92.381 105 4 4 4668 4770 126734432 126734330 4.540000e-31 147.0
39 TraesCS7A01G236200 chr2A 95.147 783 36 2 1 782 677113491 677114272 0.000000e+00 1234.0
40 TraesCS7A01G236200 chr2A 94.891 783 38 2 1 782 677074641 677075422 0.000000e+00 1223.0
41 TraesCS7A01G236200 chr1A 95.032 785 37 2 1 783 6295700 6294916 0.000000e+00 1232.0
42 TraesCS7A01G236200 chr1A 88.889 117 9 3 4660 4774 161088455 161088569 2.110000e-29 141.0
43 TraesCS7A01G236200 chr1A 82.759 145 17 4 1970 2113 361357567 361357430 7.660000e-24 122.0
44 TraesCS7A01G236200 chr1B 83.768 1226 189 7 3411 4631 631066090 631064870 0.000000e+00 1153.0
45 TraesCS7A01G236200 chr3B 97.778 90 2 0 4675 4764 146948354 146948443 7.550000e-34 156.0
46 TraesCS7A01G236200 chr3B 98.810 84 1 0 1708 1791 71403749 71403666 3.510000e-32 150.0
47 TraesCS7A01G236200 chr3B 98.780 82 1 0 1710 1791 558501101 558501182 4.540000e-31 147.0
48 TraesCS7A01G236200 chr3B 81.301 123 22 1 5505 5626 543070163 543070285 1.290000e-16 99.0
49 TraesCS7A01G236200 chr2B 98.795 83 1 0 1710 1792 161932978 161932896 1.260000e-31 148.0
50 TraesCS7A01G236200 chr6B 98.765 81 1 0 1711 1791 642728817 642728737 1.630000e-30 145.0
51 TraesCS7A01G236200 chr6B 82.237 152 18 5 1970 2120 617176581 617176724 7.660000e-24 122.0
52 TraesCS7A01G236200 chr6B 85.217 115 14 2 2001 2113 542930626 542930739 1.280000e-21 115.0
53 TraesCS7A01G236200 chr6B 78.571 126 26 1 5501 5625 199948379 199948504 1.300000e-11 82.4
54 TraesCS7A01G236200 chr4A 98.765 81 1 0 1711 1791 607427389 607427309 1.630000e-30 145.0
55 TraesCS7A01G236200 chr4A 93.684 95 6 0 4674 4768 712646315 712646221 5.880000e-30 143.0
56 TraesCS7A01G236200 chr4A 93.684 95 6 0 4674 4768 712809717 712809623 5.880000e-30 143.0
57 TraesCS7A01G236200 chr3A 73.988 346 78 9 5281 5620 691514989 691514650 4.580000e-26 130.0
58 TraesCS7A01G236200 chr6D 82.759 145 17 4 1970 2113 410398278 410398415 7.660000e-24 122.0
59 TraesCS7A01G236200 chr4B 82.105 95 14 3 5063 5155 661717951 661717858 1.680000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G236200 chr7A 209162979 209168605 5626 True 10392.000000 10392 100.0000 1 5627 1 chr7A.!!$R1 5626
1 TraesCS7A01G236200 chr7A 20161050 20161833 783 False 1236.000000 1236 95.1530 7 789 1 chr7A.!!$F1 782
2 TraesCS7A01G236200 chr7B 163504222 163509128 4906 True 765.433333 2761 88.1615 841 4938 6 chr7B.!!$R1 4097
3 TraesCS7A01G236200 chr7D 199411040 199416287 5247 True 1112.800000 2630 90.6070 838 5627 5 chr7D.!!$R2 4789
4 TraesCS7A01G236200 chr5D 27488241 27489691 1450 True 1395.000000 1395 84.2750 3183 4628 1 chr5D.!!$R1 1445
5 TraesCS7A01G236200 chr5D 28162699 28163903 1204 False 1330.000000 1330 86.6340 3411 4618 1 chr5D.!!$F1 1207
6 TraesCS7A01G236200 chr5D 27502884 27504327 1443 True 1236.000000 1236 82.2770 3209 4662 1 chr5D.!!$R2 1453
7 TraesCS7A01G236200 chr6A 600120924 600121734 810 True 1341.000000 1341 96.5470 1 809 1 chr6A.!!$R1 808
8 TraesCS7A01G236200 chr6A 590096771 590097560 789 False 1203.000000 1203 94.1770 1 789 1 chr6A.!!$F3 788
9 TraesCS7A01G236200 chr5A 18812777 18814286 1509 True 1330.000000 1330 82.7680 3148 4662 1 chr5A.!!$R1 1514
10 TraesCS7A01G236200 chr5A 565491943 565492728 785 False 1267.000000 1267 95.8020 1 784 1 chr5A.!!$F2 783
11 TraesCS7A01G236200 chr5B 20730219 20731429 1210 False 1304.000000 1304 86.0770 3411 4631 1 chr5B.!!$F3 1220
12 TraesCS7A01G236200 chr5B 20649458 20650833 1375 False 1134.000000 1134 81.6750 3253 4640 1 chr5B.!!$F2 1387
13 TraesCS7A01G236200 chrUn 292874972 292875753 781 True 1245.000000 1245 95.4020 1 782 1 chrUn.!!$R3 781
14 TraesCS7A01G236200 chrUn 31579345 31580134 789 False 1199.000000 1199 94.0580 1 790 1 chrUn.!!$F1 789
15 TraesCS7A01G236200 chr2A 677113491 677114272 781 False 1234.000000 1234 95.1470 1 782 1 chr2A.!!$F2 781
16 TraesCS7A01G236200 chr2A 677074641 677075422 781 False 1223.000000 1223 94.8910 1 782 1 chr2A.!!$F1 781
17 TraesCS7A01G236200 chr1A 6294916 6295700 784 True 1232.000000 1232 95.0320 1 783 1 chr1A.!!$R1 782
18 TraesCS7A01G236200 chr1B 631064870 631066090 1220 True 1153.000000 1153 83.7680 3411 4631 1 chr1B.!!$R1 1220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
368 371 0.615331 AGACCACAATCTGCATCCGT 59.385 50.0 0.00 0.00 0.00 4.69 F
1498 1578 0.107066 TCCCACACTGGCTATGCATG 60.107 55.0 10.16 0.26 35.79 4.06 F
3351 4889 0.110056 GAGCAACGTCAAGCATGGTG 60.110 55.0 0.00 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2155 3286 0.457035 TATGGTAAGCGTGACGACCC 59.543 55.0 10.10 2.24 0.00 4.46 R
3397 4936 0.643820 CGGCCGACGTTTTACTCATC 59.356 55.0 24.07 0.00 37.93 2.92 R
4975 6734 0.034896 GAGGGAGAACCGCACAAAGA 59.965 55.0 0.00 0.00 46.96 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
241 243 1.736645 CGGACACGCCATCGAACTT 60.737 57.895 0.00 0.00 39.41 2.66
327 330 3.386726 CCACGAACCCAGTAGATATTCCA 59.613 47.826 0.00 0.00 0.00 3.53
368 371 0.615331 AGACCACAATCTGCATCCGT 59.385 50.000 0.00 0.00 0.00 4.69
533 536 0.694444 ACCATAGGACCGATGGCCTT 60.694 55.000 28.23 10.80 46.76 4.35
611 614 4.909880 GCAAAGACGATGAACAACCTAAAC 59.090 41.667 0.00 0.00 0.00 2.01
629 632 8.634188 ACCTAAACACCTAAACTATAAGGGAT 57.366 34.615 0.00 0.00 37.18 3.85
630 633 9.065722 ACCTAAACACCTAAACTATAAGGGATT 57.934 33.333 0.00 0.00 37.18 3.01
736 740 1.384191 GTTGGGAGATTGGCCCTGT 59.616 57.895 0.00 0.00 46.19 4.00
806 810 3.429207 GCGTTTCTACAGGAAGACAGTTC 59.571 47.826 0.00 0.00 35.16 3.01
807 811 4.617959 CGTTTCTACAGGAAGACAGTTCA 58.382 43.478 0.00 0.00 35.16 3.18
808 812 4.681942 CGTTTCTACAGGAAGACAGTTCAG 59.318 45.833 0.00 0.00 35.16 3.02
809 813 5.507482 CGTTTCTACAGGAAGACAGTTCAGA 60.507 44.000 0.00 0.00 35.16 3.27
810 814 6.281405 GTTTCTACAGGAAGACAGTTCAGAA 58.719 40.000 0.00 0.00 35.16 3.02
811 815 6.672266 TTCTACAGGAAGACAGTTCAGAAT 57.328 37.500 0.00 0.00 0.00 2.40
812 816 7.776618 TTCTACAGGAAGACAGTTCAGAATA 57.223 36.000 0.00 0.00 0.00 1.75
813 817 7.159322 TCTACAGGAAGACAGTTCAGAATAC 57.841 40.000 0.00 0.00 0.00 1.89
814 818 5.808366 ACAGGAAGACAGTTCAGAATACA 57.192 39.130 0.00 0.00 0.00 2.29
815 819 5.542779 ACAGGAAGACAGTTCAGAATACAC 58.457 41.667 0.00 0.00 0.00 2.90
816 820 5.070446 ACAGGAAGACAGTTCAGAATACACA 59.930 40.000 0.00 0.00 0.00 3.72
817 821 5.991606 CAGGAAGACAGTTCAGAATACACAA 59.008 40.000 0.00 0.00 0.00 3.33
818 822 6.652481 CAGGAAGACAGTTCAGAATACACAAT 59.348 38.462 0.00 0.00 0.00 2.71
819 823 6.876257 AGGAAGACAGTTCAGAATACACAATC 59.124 38.462 0.00 0.00 0.00 2.67
820 824 6.092807 GGAAGACAGTTCAGAATACACAATCC 59.907 42.308 0.00 0.00 0.00 3.01
821 825 6.365970 AGACAGTTCAGAATACACAATCCT 57.634 37.500 0.00 0.00 0.00 3.24
822 826 7.482169 AGACAGTTCAGAATACACAATCCTA 57.518 36.000 0.00 0.00 0.00 2.94
823 827 7.324178 AGACAGTTCAGAATACACAATCCTAC 58.676 38.462 0.00 0.00 0.00 3.18
824 828 7.004555 ACAGTTCAGAATACACAATCCTACA 57.995 36.000 0.00 0.00 0.00 2.74
825 829 7.624549 ACAGTTCAGAATACACAATCCTACAT 58.375 34.615 0.00 0.00 0.00 2.29
826 830 8.758829 ACAGTTCAGAATACACAATCCTACATA 58.241 33.333 0.00 0.00 0.00 2.29
827 831 9.254133 CAGTTCAGAATACACAATCCTACATAG 57.746 37.037 0.00 0.00 0.00 2.23
828 832 7.928706 AGTTCAGAATACACAATCCTACATAGC 59.071 37.037 0.00 0.00 0.00 2.97
829 833 7.603180 TCAGAATACACAATCCTACATAGCT 57.397 36.000 0.00 0.00 0.00 3.32
830 834 7.661968 TCAGAATACACAATCCTACATAGCTC 58.338 38.462 0.00 0.00 0.00 4.09
831 835 6.870965 CAGAATACACAATCCTACATAGCTCC 59.129 42.308 0.00 0.00 0.00 4.70
832 836 3.735237 ACACAATCCTACATAGCTCCG 57.265 47.619 0.00 0.00 0.00 4.63
833 837 3.031736 ACACAATCCTACATAGCTCCGT 58.968 45.455 0.00 0.00 0.00 4.69
834 838 3.181475 ACACAATCCTACATAGCTCCGTG 60.181 47.826 0.00 0.00 0.00 4.94
835 839 3.031736 ACAATCCTACATAGCTCCGTGT 58.968 45.455 0.00 0.00 0.00 4.49
836 840 3.181475 ACAATCCTACATAGCTCCGTGTG 60.181 47.826 8.98 0.00 0.00 3.82
855 859 2.045926 AGCCACATGGAACTCGCC 60.046 61.111 0.87 0.00 37.39 5.54
897 901 1.136721 CCTGTATAAATACACGCGCGC 60.137 52.381 32.58 23.91 38.28 6.86
933 944 1.821332 GCATAAGCCGAGCCTTGCT 60.821 57.895 0.00 0.00 40.17 3.91
934 945 2.020131 CATAAGCCGAGCCTTGCTG 58.980 57.895 0.00 0.00 39.88 4.41
935 946 1.821332 ATAAGCCGAGCCTTGCTGC 60.821 57.895 0.00 0.00 39.88 5.25
957 968 3.980775 CACACAGACAAATTAAAAGGGCG 59.019 43.478 0.00 0.00 0.00 6.13
973 984 2.506438 CGGAGAGAAACGACGGGC 60.506 66.667 0.00 0.00 0.00 6.13
1176 1190 2.750237 GGGACGCCCAACACCATC 60.750 66.667 9.72 0.00 44.65 3.51
1219 1233 9.886132 CAGTGGTAACCTTCTACAGTAATTATT 57.114 33.333 0.00 0.00 0.00 1.40
1277 1303 0.894835 TTTACCGGGGTAACGTCCTC 59.105 55.000 6.32 0.00 39.90 3.71
1316 1342 2.623416 TGGTCATGGTCATACTAGAGCG 59.377 50.000 0.00 0.00 38.81 5.03
1317 1343 2.608261 GGTCATGGTCATACTAGAGCGC 60.608 54.545 0.00 0.00 38.81 5.92
1318 1344 1.266989 TCATGGTCATACTAGAGCGCG 59.733 52.381 0.00 0.00 38.81 6.86
1321 1347 1.871676 TGGTCATACTAGAGCGCGTAG 59.128 52.381 8.43 15.79 38.81 3.51
1461 1541 4.878968 TGGATTCCATACACTAGTCCTCA 58.121 43.478 0.00 0.00 0.00 3.86
1495 1575 1.153086 CCTCCCACACTGGCTATGC 60.153 63.158 0.00 0.00 35.79 3.14
1496 1576 1.603842 CTCCCACACTGGCTATGCA 59.396 57.895 0.00 0.00 35.79 3.96
1497 1577 0.182061 CTCCCACACTGGCTATGCAT 59.818 55.000 3.79 3.79 35.79 3.96
1498 1578 0.107066 TCCCACACTGGCTATGCATG 60.107 55.000 10.16 0.26 35.79 4.06
1608 1688 8.201554 TCTTCCTCAGAAATATTCAAACGATG 57.798 34.615 0.00 0.00 0.00 3.84
1632 1712 6.742109 GCATATGCAATCATACTTGTTTCCT 58.258 36.000 22.84 0.00 37.94 3.36
1662 1742 7.775397 ATTATTGCACTGCATTAATTGTTCC 57.225 32.000 18.98 0.00 40.08 3.62
1712 1792 1.539827 AGCCACGCCATTCTTTTGTAC 59.460 47.619 0.00 0.00 0.00 2.90
1713 1793 1.539827 GCCACGCCATTCTTTTGTACT 59.460 47.619 0.00 0.00 0.00 2.73
1714 1794 2.030274 GCCACGCCATTCTTTTGTACTT 60.030 45.455 0.00 0.00 0.00 2.24
1715 1795 3.821841 CCACGCCATTCTTTTGTACTTC 58.178 45.455 0.00 0.00 0.00 3.01
1716 1796 3.365969 CCACGCCATTCTTTTGTACTTCC 60.366 47.826 0.00 0.00 0.00 3.46
1717 1797 3.502211 CACGCCATTCTTTTGTACTTCCT 59.498 43.478 0.00 0.00 0.00 3.36
1718 1798 3.751698 ACGCCATTCTTTTGTACTTCCTC 59.248 43.478 0.00 0.00 0.00 3.71
1719 1799 3.127030 CGCCATTCTTTTGTACTTCCTCC 59.873 47.826 0.00 0.00 0.00 4.30
1720 1800 3.127030 GCCATTCTTTTGTACTTCCTCCG 59.873 47.826 0.00 0.00 0.00 4.63
1721 1801 4.324267 CCATTCTTTTGTACTTCCTCCGT 58.676 43.478 0.00 0.00 0.00 4.69
1722 1802 4.760204 CCATTCTTTTGTACTTCCTCCGTT 59.240 41.667 0.00 0.00 0.00 4.44
1723 1803 5.106673 CCATTCTTTTGTACTTCCTCCGTTC 60.107 44.000 0.00 0.00 0.00 3.95
1724 1804 3.999046 TCTTTTGTACTTCCTCCGTTCC 58.001 45.455 0.00 0.00 0.00 3.62
1725 1805 3.388676 TCTTTTGTACTTCCTCCGTTCCA 59.611 43.478 0.00 0.00 0.00 3.53
1726 1806 3.842007 TTTGTACTTCCTCCGTTCCAA 57.158 42.857 0.00 0.00 0.00 3.53
1727 1807 3.842007 TTGTACTTCCTCCGTTCCAAA 57.158 42.857 0.00 0.00 0.00 3.28
1728 1808 3.842007 TGTACTTCCTCCGTTCCAAAA 57.158 42.857 0.00 0.00 0.00 2.44
1729 1809 4.360951 TGTACTTCCTCCGTTCCAAAAT 57.639 40.909 0.00 0.00 0.00 1.82
1730 1810 5.486735 TGTACTTCCTCCGTTCCAAAATA 57.513 39.130 0.00 0.00 0.00 1.40
1731 1811 5.484715 TGTACTTCCTCCGTTCCAAAATAG 58.515 41.667 0.00 0.00 0.00 1.73
1732 1812 4.903045 ACTTCCTCCGTTCCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
1733 1813 5.437191 ACTTCCTCCGTTCCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
1734 1814 5.186198 ACTTCCTCCGTTCCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
1735 1815 5.045869 ACTTCCTCCGTTCCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
1736 1816 5.630415 TCCTCCGTTCCAAAATAGATGAT 57.370 39.130 0.00 0.00 0.00 2.45
1737 1817 5.611374 TCCTCCGTTCCAAAATAGATGATC 58.389 41.667 0.00 0.00 0.00 2.92
1738 1818 4.757149 CCTCCGTTCCAAAATAGATGATCC 59.243 45.833 0.00 0.00 0.00 3.36
1739 1819 5.366482 TCCGTTCCAAAATAGATGATCCA 57.634 39.130 0.00 0.00 0.00 3.41
1740 1820 5.750524 TCCGTTCCAAAATAGATGATCCAA 58.249 37.500 0.00 0.00 0.00 3.53
1741 1821 5.588648 TCCGTTCCAAAATAGATGATCCAAC 59.411 40.000 0.00 0.00 0.00 3.77
1742 1822 5.590259 CCGTTCCAAAATAGATGATCCAACT 59.410 40.000 0.00 0.00 0.00 3.16
1743 1823 6.095440 CCGTTCCAAAATAGATGATCCAACTT 59.905 38.462 0.00 0.00 0.00 2.66
1744 1824 7.362920 CCGTTCCAAAATAGATGATCCAACTTT 60.363 37.037 0.00 0.00 0.00 2.66
1745 1825 7.485913 CGTTCCAAAATAGATGATCCAACTTTG 59.514 37.037 0.00 0.00 0.00 2.77
1746 1826 8.306761 GTTCCAAAATAGATGATCCAACTTTGT 58.693 33.333 0.00 0.00 0.00 2.83
1747 1827 9.527157 TTCCAAAATAGATGATCCAACTTTGTA 57.473 29.630 0.00 0.00 0.00 2.41
1748 1828 8.956426 TCCAAAATAGATGATCCAACTTTGTAC 58.044 33.333 0.00 0.00 0.00 2.90
1749 1829 8.960591 CCAAAATAGATGATCCAACTTTGTACT 58.039 33.333 0.00 0.00 0.00 2.73
1753 1833 9.614792 AATAGATGATCCAACTTTGTACTAACC 57.385 33.333 0.00 0.00 0.00 2.85
1754 1834 7.259088 AGATGATCCAACTTTGTACTAACCT 57.741 36.000 0.00 0.00 0.00 3.50
1755 1835 7.690256 AGATGATCCAACTTTGTACTAACCTT 58.310 34.615 0.00 0.00 0.00 3.50
1756 1836 8.822805 AGATGATCCAACTTTGTACTAACCTTA 58.177 33.333 0.00 0.00 0.00 2.69
1757 1837 9.099454 GATGATCCAACTTTGTACTAACCTTAG 57.901 37.037 0.00 0.00 36.82 2.18
1758 1838 7.970102 TGATCCAACTTTGTACTAACCTTAGT 58.030 34.615 3.29 3.29 45.39 2.24
1759 1839 9.092338 TGATCCAACTTTGTACTAACCTTAGTA 57.908 33.333 1.45 1.45 43.36 1.82
1770 1850 6.505048 ACTAACCTTAGTACAAAGTTGGGT 57.495 37.500 0.00 0.00 41.92 4.51
1771 1851 6.528321 ACTAACCTTAGTACAAAGTTGGGTC 58.472 40.000 0.00 0.00 41.92 4.46
1772 1852 5.376756 AACCTTAGTACAAAGTTGGGTCA 57.623 39.130 0.00 0.00 0.00 4.02
1773 1853 5.578157 ACCTTAGTACAAAGTTGGGTCAT 57.422 39.130 0.00 0.00 0.00 3.06
1774 1854 5.557866 ACCTTAGTACAAAGTTGGGTCATC 58.442 41.667 0.00 0.00 0.00 2.92
1775 1855 5.309806 ACCTTAGTACAAAGTTGGGTCATCT 59.690 40.000 0.00 0.00 0.00 2.90
1776 1856 6.499350 ACCTTAGTACAAAGTTGGGTCATCTA 59.501 38.462 0.00 0.00 0.00 1.98
1777 1857 7.182206 ACCTTAGTACAAAGTTGGGTCATCTAT 59.818 37.037 0.00 0.00 0.00 1.98
1778 1858 8.047310 CCTTAGTACAAAGTTGGGTCATCTATT 58.953 37.037 0.00 0.00 0.00 1.73
1779 1859 9.449719 CTTAGTACAAAGTTGGGTCATCTATTT 57.550 33.333 0.00 0.00 0.00 1.40
1780 1860 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
1781 1861 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
1782 1862 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
1783 1863 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
1784 1864 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
1785 1865 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
1786 1866 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
1787 1867 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
1788 1868 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
1789 1869 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
1790 1870 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
1796 1876 5.183228 TCTATTTTGGAACGGAGGACAATC 58.817 41.667 0.00 0.00 0.00 2.67
1818 1898 2.897271 TTTTCAGCTCCCCTGCAATA 57.103 45.000 0.00 0.00 41.50 1.90
1819 1899 3.386932 TTTTCAGCTCCCCTGCAATAT 57.613 42.857 0.00 0.00 41.50 1.28
1821 1901 4.729552 TTTCAGCTCCCCTGCAATATAT 57.270 40.909 0.00 0.00 41.50 0.86
1840 2565 1.065273 CCGCTCCAAATGCATGCTC 59.935 57.895 20.33 0.00 0.00 4.26
1841 2566 1.659622 CCGCTCCAAATGCATGCTCA 61.660 55.000 20.33 0.00 0.00 4.26
1842 2567 0.524816 CGCTCCAAATGCATGCTCAC 60.525 55.000 20.33 0.00 0.00 3.51
1844 2569 1.471119 CTCCAAATGCATGCTCACCT 58.529 50.000 20.33 0.00 0.00 4.00
1845 2570 1.822990 CTCCAAATGCATGCTCACCTT 59.177 47.619 20.33 2.02 0.00 3.50
1846 2571 2.232941 CTCCAAATGCATGCTCACCTTT 59.767 45.455 20.33 7.91 0.00 3.11
1848 2573 2.997986 CCAAATGCATGCTCACCTTTTC 59.002 45.455 20.33 0.00 0.00 2.29
1867 2592 6.640907 CCTTTTCTTGCACTAAATTTAACGCT 59.359 34.615 15.68 0.00 0.00 5.07
1971 3087 6.916387 GCAAAATGTCGTCATACTAGCTAGTA 59.084 38.462 30.67 30.67 42.43 1.82
1973 3089 6.557291 AATGTCGTCATACTAGCTAGTACC 57.443 41.667 31.06 21.09 41.18 3.34
1996 3112 4.430908 CCCTCCGTTCACAAATAGAGTAC 58.569 47.826 0.00 0.00 0.00 2.73
1998 3114 5.475719 CCTCCGTTCACAAATAGAGTACAA 58.524 41.667 0.00 0.00 0.00 2.41
2039 3156 9.909644 ATTCCAATATAGACTACATACGAACAC 57.090 33.333 0.00 0.00 0.00 3.32
2045 3162 9.692749 ATATAGACTACATACGAACACAAATGG 57.307 33.333 0.00 0.00 0.00 3.16
2050 3167 6.935771 ACTACATACGAACACAAATGGGTAAA 59.064 34.615 0.00 0.00 0.00 2.01
2051 3168 6.827586 ACATACGAACACAAATGGGTAAAT 57.172 33.333 0.00 0.00 0.00 1.40
2059 3176 7.096394 CGAACACAAATGGGTAAATAAACACAC 60.096 37.037 0.00 0.00 35.10 3.82
2100 3217 5.897824 ACATCCGAATTAGAGAAGGTTAGGA 59.102 40.000 0.00 0.00 31.50 2.94
2102 3219 4.648307 TCCGAATTAGAGAAGGTTAGGACC 59.352 45.833 0.00 0.00 46.92 4.46
2143 3274 3.233507 AGGTGGAATGTCAAAGCATGTT 58.766 40.909 0.00 0.00 0.00 2.71
2144 3275 3.256631 AGGTGGAATGTCAAAGCATGTTC 59.743 43.478 0.00 0.00 0.00 3.18
2155 3286 0.729116 AGCATGTTCTTGATTCGCCG 59.271 50.000 0.00 0.00 0.00 6.46
2186 3317 2.872858 GCTTACCATACAGCCAGCTAAC 59.127 50.000 0.00 0.00 0.00 2.34
2195 3326 1.068121 AGCCAGCTAACTTCCCTTGT 58.932 50.000 0.00 0.00 0.00 3.16
2196 3327 2.027192 CAGCCAGCTAACTTCCCTTGTA 60.027 50.000 0.00 0.00 0.00 2.41
2243 3374 2.753966 CGCCAGCCGAACAGAATGG 61.754 63.158 0.00 0.00 39.29 3.16
2310 3450 4.036262 GCGCCAGACAATAATAATTCCACA 59.964 41.667 0.00 0.00 0.00 4.17
2328 3468 7.643569 TTCCACACAAGGTACGTATATTAGA 57.356 36.000 0.00 0.00 0.00 2.10
2338 3478 5.790495 GGTACGTATATTAGAACTAACGCGG 59.210 44.000 12.47 0.00 0.00 6.46
2430 3595 1.726853 AGTCGTTGTTAGCATGCTCC 58.273 50.000 26.57 16.69 0.00 4.70
2492 3660 1.226030 CCTGACAAACGACGGAACCC 61.226 60.000 0.00 0.00 0.00 4.11
2560 3730 2.508891 CGTCGTGATCAGCGGCTTC 61.509 63.158 16.35 0.00 0.00 3.86
2561 3731 1.446099 GTCGTGATCAGCGGCTTCA 60.446 57.895 0.00 0.00 0.00 3.02
2562 3732 0.807667 GTCGTGATCAGCGGCTTCAT 60.808 55.000 7.57 0.00 0.00 2.57
2619 3789 2.390427 GTGTGGCACGGGTATTAGC 58.610 57.895 13.77 0.00 0.00 3.09
2625 3795 2.232941 TGGCACGGGTATTAGCTATAGC 59.767 50.000 17.33 17.33 42.49 2.97
2626 3796 2.232941 GGCACGGGTATTAGCTATAGCA 59.767 50.000 26.07 7.38 45.16 3.49
2627 3797 3.251571 GCACGGGTATTAGCTATAGCAC 58.748 50.000 26.07 14.92 45.16 4.40
2628 3798 3.305813 GCACGGGTATTAGCTATAGCACA 60.306 47.826 26.07 12.52 45.16 4.57
2653 3823 4.218635 ACATAGTATGTGTAGGCAGGATCG 59.781 45.833 15.07 0.00 43.01 3.69
2655 3825 3.828921 AGTATGTGTAGGCAGGATCGTA 58.171 45.455 0.00 0.00 0.00 3.43
2748 3941 0.519519 TGATTGCTACGCGGTTTTGG 59.480 50.000 12.47 0.00 0.00 3.28
2749 3942 0.796870 GATTGCTACGCGGTTTTGGC 60.797 55.000 12.47 2.96 0.00 4.52
2750 3943 2.207788 ATTGCTACGCGGTTTTGGCC 62.208 55.000 12.47 0.00 0.00 5.36
2784 3977 9.536558 CACATGCATCTATTTCAATTTTTGTTG 57.463 29.630 0.00 0.00 0.00 3.33
2788 3981 6.733280 GCATCTATTTCAATTTTTGTTGCACG 59.267 34.615 0.00 0.00 0.00 5.34
2796 3989 5.982516 TCAATTTTTGTTGCACGAAGCTATT 59.017 32.000 6.22 0.00 45.94 1.73
2799 3992 4.560136 TTTGTTGCACGAAGCTATTTCA 57.440 36.364 6.22 0.00 45.94 2.69
2800 3993 4.560136 TTGTTGCACGAAGCTATTTCAA 57.440 36.364 6.22 0.00 45.94 2.69
2801 3994 3.884169 TGTTGCACGAAGCTATTTCAAC 58.116 40.909 10.12 10.12 45.94 3.18
2803 3996 4.023279 TGTTGCACGAAGCTATTTCAACAT 60.023 37.500 13.74 0.00 45.94 2.71
2804 3997 4.764679 TGCACGAAGCTATTTCAACATT 57.235 36.364 6.22 0.00 45.94 2.71
2805 3998 4.722194 TGCACGAAGCTATTTCAACATTC 58.278 39.130 6.22 0.00 45.94 2.67
2806 3999 4.455533 TGCACGAAGCTATTTCAACATTCT 59.544 37.500 6.22 0.00 45.94 2.40
2807 4000 5.641636 TGCACGAAGCTATTTCAACATTCTA 59.358 36.000 6.22 0.00 45.94 2.10
2808 4001 6.148645 TGCACGAAGCTATTTCAACATTCTAA 59.851 34.615 6.22 0.00 45.94 2.10
2809 4002 6.466097 GCACGAAGCTATTTCAACATTCTAAC 59.534 38.462 0.00 0.00 41.15 2.34
2810 4003 7.624344 GCACGAAGCTATTTCAACATTCTAACT 60.624 37.037 0.00 0.00 41.15 2.24
2814 4333 7.235430 AGCTATTTCAACATTCTAACTACGC 57.765 36.000 0.00 0.00 0.00 4.42
2854 4373 3.668141 TCCATGGCCAAGTGATTACAT 57.332 42.857 10.96 0.00 0.00 2.29
2878 4397 4.328536 TGGCTATGTTTTCCACAACGTAT 58.671 39.130 0.00 0.00 39.50 3.06
2889 4408 6.822073 TTCCACAACGTATTCGAATATCTG 57.178 37.500 20.21 17.92 40.62 2.90
2899 4418 6.360947 CGTATTCGAATATCTGAGGTCAAGTG 59.639 42.308 20.21 0.00 39.71 3.16
2969 4488 4.675510 CAGTACATGACATGGAAAATGGC 58.324 43.478 19.39 0.00 33.60 4.40
3026 4545 2.031191 ACGCATCGAAGACAAAAACGTT 59.969 40.909 0.00 0.00 42.51 3.99
3027 4546 2.397154 CGCATCGAAGACAAAAACGTTG 59.603 45.455 0.00 0.00 42.51 4.10
3028 4547 3.359654 GCATCGAAGACAAAAACGTTGT 58.640 40.909 0.00 0.00 42.51 3.32
3029 4548 4.520078 GCATCGAAGACAAAAACGTTGTA 58.480 39.130 0.00 0.00 42.51 2.41
3030 4549 4.374828 GCATCGAAGACAAAAACGTTGTAC 59.625 41.667 0.00 0.00 42.51 2.90
3031 4550 4.519191 TCGAAGACAAAAACGTTGTACC 57.481 40.909 0.00 0.00 31.96 3.34
3032 4551 4.183101 TCGAAGACAAAAACGTTGTACCT 58.817 39.130 0.00 0.00 31.96 3.08
3033 4552 4.033129 TCGAAGACAAAAACGTTGTACCTG 59.967 41.667 0.00 0.00 31.96 4.00
3034 4553 4.594136 GAAGACAAAAACGTTGTACCTGG 58.406 43.478 0.00 0.00 31.96 4.45
3035 4554 3.876341 AGACAAAAACGTTGTACCTGGA 58.124 40.909 0.00 0.00 31.96 3.86
3036 4555 4.263435 AGACAAAAACGTTGTACCTGGAA 58.737 39.130 0.00 0.00 31.96 3.53
3041 4560 3.832615 AACGTTGTACCTGGAAGAACT 57.167 42.857 0.00 0.00 34.07 3.01
3044 4563 3.057734 CGTTGTACCTGGAAGAACTGAC 58.942 50.000 0.00 0.00 34.07 3.51
3084 4603 4.530710 AATACTACGACCTTTCACTGCA 57.469 40.909 0.00 0.00 0.00 4.41
3107 4626 6.144402 GCATAACTCATCCACTGTTTGTTTTG 59.856 38.462 0.00 0.00 0.00 2.44
3109 4628 3.181476 ACTCATCCACTGTTTGTTTTGGC 60.181 43.478 0.00 0.00 0.00 4.52
3110 4629 2.762887 TCATCCACTGTTTGTTTTGGCA 59.237 40.909 0.00 0.00 0.00 4.92
3111 4630 3.387374 TCATCCACTGTTTGTTTTGGCAT 59.613 39.130 0.00 0.00 0.00 4.40
3118 4637 7.448777 TCCACTGTTTGTTTTGGCATTACTATA 59.551 33.333 0.00 0.00 0.00 1.31
3146 4665 9.524106 TTATTTTGTCGATCATCATACGTAGTT 57.476 29.630 0.08 0.00 37.78 2.24
3168 4688 7.909518 AGTTGTACTCTCTAGTCTCTCTTACA 58.090 38.462 0.00 0.00 37.15 2.41
3207 4739 6.595326 TGATTGACCAGCTGTTAATCTAGTTG 59.405 38.462 23.59 6.54 45.48 3.16
3322 4854 3.569049 AACTCGGTCAAGACGGCGG 62.569 63.158 13.24 0.00 0.00 6.13
3351 4889 0.110056 GAGCAACGTCAAGCATGGTG 60.110 55.000 0.00 0.00 0.00 4.17
3356 4894 1.512926 ACGTCAAGCATGGTGAGTTC 58.487 50.000 0.00 0.00 0.00 3.01
3357 4895 1.070758 ACGTCAAGCATGGTGAGTTCT 59.929 47.619 0.00 0.00 0.00 3.01
3358 4896 2.146342 CGTCAAGCATGGTGAGTTCTT 58.854 47.619 0.00 0.00 0.00 2.52
3359 4897 2.096069 CGTCAAGCATGGTGAGTTCTTG 60.096 50.000 0.00 0.00 36.42 3.02
3360 4898 1.881973 TCAAGCATGGTGAGTTCTTGC 59.118 47.619 0.00 0.00 35.42 4.01
3362 4900 0.111061 AGCATGGTGAGTTCTTGCCA 59.889 50.000 0.00 0.00 36.38 4.92
3369 4908 2.540973 GGTGAGTTCTTGCCACGAAAAC 60.541 50.000 0.00 0.00 0.00 2.43
3372 4911 4.034742 GTGAGTTCTTGCCACGAAAACTTA 59.965 41.667 0.00 0.00 30.68 2.24
3378 4917 4.636648 TCTTGCCACGAAAACTTAACTTCA 59.363 37.500 0.00 0.00 0.00 3.02
3382 4921 4.611366 GCCACGAAAACTTAACTTCAATCG 59.389 41.667 0.00 0.00 35.36 3.34
3383 4922 5.744490 CCACGAAAACTTAACTTCAATCGT 58.256 37.500 0.00 0.00 42.32 3.73
3384 4923 5.844396 CCACGAAAACTTAACTTCAATCGTC 59.156 40.000 0.00 0.00 39.93 4.20
3386 4925 6.902948 CACGAAAACTTAACTTCAATCGTCAA 59.097 34.615 0.00 0.00 39.93 3.18
3387 4926 7.586300 CACGAAAACTTAACTTCAATCGTCAAT 59.414 33.333 0.00 0.00 39.93 2.57
3390 4929 5.779806 ACTTAACTTCAATCGTCAATCGG 57.220 39.130 0.00 0.00 40.32 4.18
3392 4931 6.392354 ACTTAACTTCAATCGTCAATCGGTA 58.608 36.000 0.00 0.00 40.32 4.02
3393 4932 6.869913 ACTTAACTTCAATCGTCAATCGGTAA 59.130 34.615 0.00 0.00 40.32 2.85
3397 4936 5.063438 ACTTCAATCGTCAATCGGTAACATG 59.937 40.000 0.00 0.00 40.32 3.21
3398 4937 4.749976 TCAATCGTCAATCGGTAACATGA 58.250 39.130 0.00 0.00 40.32 3.07
3400 4939 5.234116 TCAATCGTCAATCGGTAACATGATG 59.766 40.000 0.00 0.00 40.32 3.07
3623 5189 2.753452 TGGAGTACATCGAGAAGGTGAC 59.247 50.000 0.00 0.00 34.34 3.67
3893 5459 1.726791 CATCGTCGACTTCAACAAGGG 59.273 52.381 14.70 0.00 33.37 3.95
4065 5631 1.904771 CATCCCGTACAAGGAGGCA 59.095 57.895 7.62 0.00 36.67 4.75
4663 6240 7.676683 ATATACTCCTAGGTTGCAAGAAGAA 57.323 36.000 9.08 0.00 0.00 2.52
4664 6241 4.278975 ACTCCTAGGTTGCAAGAAGAAG 57.721 45.455 9.08 0.00 0.00 2.85
4665 6242 3.904339 ACTCCTAGGTTGCAAGAAGAAGA 59.096 43.478 9.08 0.00 0.00 2.87
4666 6243 4.348168 ACTCCTAGGTTGCAAGAAGAAGAA 59.652 41.667 9.08 0.00 0.00 2.52
4667 6244 5.013599 ACTCCTAGGTTGCAAGAAGAAGAAT 59.986 40.000 9.08 0.00 0.00 2.40
4668 6245 5.248640 TCCTAGGTTGCAAGAAGAAGAATG 58.751 41.667 9.08 0.00 0.00 2.67
4669 6246 5.006386 CCTAGGTTGCAAGAAGAAGAATGT 58.994 41.667 0.00 0.00 0.00 2.71
4670 6247 5.123027 CCTAGGTTGCAAGAAGAAGAATGTC 59.877 44.000 0.00 0.00 0.00 3.06
4671 6248 4.464008 AGGTTGCAAGAAGAAGAATGTCA 58.536 39.130 0.00 0.00 0.00 3.58
4672 6249 4.276926 AGGTTGCAAGAAGAAGAATGTCAC 59.723 41.667 0.00 0.00 0.00 3.67
4673 6250 4.036734 GGTTGCAAGAAGAAGAATGTCACA 59.963 41.667 0.00 0.00 0.00 3.58
4674 6251 5.278660 GGTTGCAAGAAGAAGAATGTCACAT 60.279 40.000 0.00 0.00 0.00 3.21
4675 6252 6.072508 GGTTGCAAGAAGAAGAATGTCACATA 60.073 38.462 0.00 0.00 0.00 2.29
4676 6253 6.486253 TGCAAGAAGAAGAATGTCACATAC 57.514 37.500 0.00 0.00 0.00 2.39
4677 6254 6.233434 TGCAAGAAGAAGAATGTCACATACT 58.767 36.000 0.00 0.00 0.00 2.12
4678 6255 6.369890 TGCAAGAAGAAGAATGTCACATACTC 59.630 38.462 0.00 0.00 0.00 2.59
4679 6256 6.183360 GCAAGAAGAAGAATGTCACATACTCC 60.183 42.308 0.00 0.00 0.00 3.85
4680 6257 5.983540 AGAAGAAGAATGTCACATACTCCC 58.016 41.667 0.00 0.00 0.00 4.30
4681 6258 5.723887 AGAAGAAGAATGTCACATACTCCCT 59.276 40.000 0.00 0.00 0.00 4.20
4682 6259 6.214412 AGAAGAAGAATGTCACATACTCCCTT 59.786 38.462 0.00 0.00 0.00 3.95
4683 6260 5.983540 AGAAGAATGTCACATACTCCCTTC 58.016 41.667 0.00 0.35 32.49 3.46
4684 6261 4.392921 AGAATGTCACATACTCCCTTCG 57.607 45.455 0.00 0.00 0.00 3.79
4685 6262 3.769844 AGAATGTCACATACTCCCTTCGT 59.230 43.478 0.00 0.00 0.00 3.85
4686 6263 4.954202 AGAATGTCACATACTCCCTTCGTA 59.046 41.667 0.00 0.00 0.00 3.43
4687 6264 5.421056 AGAATGTCACATACTCCCTTCGTAA 59.579 40.000 0.00 0.00 0.00 3.18
4688 6265 5.670792 ATGTCACATACTCCCTTCGTAAA 57.329 39.130 0.00 0.00 0.00 2.01
4689 6266 4.813027 TGTCACATACTCCCTTCGTAAAC 58.187 43.478 0.00 0.00 0.00 2.01
4690 6267 4.525487 TGTCACATACTCCCTTCGTAAACT 59.475 41.667 0.00 0.00 0.00 2.66
4691 6268 5.711506 TGTCACATACTCCCTTCGTAAACTA 59.288 40.000 0.00 0.00 0.00 2.24
4692 6269 6.209192 TGTCACATACTCCCTTCGTAAACTAA 59.791 38.462 0.00 0.00 0.00 2.24
4693 6270 7.093640 TGTCACATACTCCCTTCGTAAACTAAT 60.094 37.037 0.00 0.00 0.00 1.73
4694 6271 8.408601 GTCACATACTCCCTTCGTAAACTAATA 58.591 37.037 0.00 0.00 0.00 0.98
4695 6272 9.139734 TCACATACTCCCTTCGTAAACTAATAT 57.860 33.333 0.00 0.00 0.00 1.28
4701 6278 8.358895 ACTCCCTTCGTAAACTAATATAAGAGC 58.641 37.037 0.00 0.00 0.00 4.09
4702 6279 8.241497 TCCCTTCGTAAACTAATATAAGAGCA 57.759 34.615 0.00 0.00 0.00 4.26
4703 6280 8.867097 TCCCTTCGTAAACTAATATAAGAGCAT 58.133 33.333 0.00 0.00 0.00 3.79
4704 6281 9.490379 CCCTTCGTAAACTAATATAAGAGCATT 57.510 33.333 0.00 0.00 0.00 3.56
4732 6309 9.250624 AGATCACTATTTTAGTTATCTCAACGC 57.749 33.333 5.82 0.00 42.92 4.84
4733 6310 9.250624 GATCACTATTTTAGTTATCTCAACGCT 57.749 33.333 0.00 0.00 36.79 5.07
4734 6311 8.630278 TCACTATTTTAGTTATCTCAACGCTC 57.370 34.615 0.00 0.00 36.76 5.03
4735 6312 8.467598 TCACTATTTTAGTTATCTCAACGCTCT 58.532 33.333 0.00 0.00 36.76 4.09
4736 6313 9.088512 CACTATTTTAGTTATCTCAACGCTCTT 57.911 33.333 0.00 0.00 36.76 2.85
4750 6327 9.731819 TCTCAACGCTCTTATATTAGTTTACAG 57.268 33.333 0.00 0.00 0.00 2.74
4751 6328 9.731819 CTCAACGCTCTTATATTAGTTTACAGA 57.268 33.333 0.00 0.00 0.00 3.41
4752 6329 9.731819 TCAACGCTCTTATATTAGTTTACAGAG 57.268 33.333 0.00 0.00 0.00 3.35
4753 6330 8.969267 CAACGCTCTTATATTAGTTTACAGAGG 58.031 37.037 0.00 0.00 0.00 3.69
4754 6331 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
4755 6332 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
4756 6333 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
4799 6376 1.795768 AACATCTGCGTGTACTGGTG 58.204 50.000 0.00 0.00 0.00 4.17
4858 6435 1.966451 ACTCCCCAAAAGAAGCGCG 60.966 57.895 0.00 0.00 0.00 6.86
4890 6467 9.032624 TCAGAGAATGATATAGCATGAGAATGA 57.967 33.333 3.84 3.60 31.12 2.57
4933 6510 8.479313 AAGATTGTTTTGTTTTGAGAGAAACC 57.521 30.769 0.00 0.00 38.45 3.27
4939 6516 7.333174 TGTTTTGTTTTGAGAGAAACCCAATTC 59.667 33.333 0.00 0.00 38.45 2.17
4952 6529 4.675063 ACCCAATTCATACCCTTGAACT 57.325 40.909 0.00 0.00 38.37 3.01
4976 6735 2.504244 CGAGTTCGGCGGTGACTC 60.504 66.667 20.89 20.89 35.37 3.36
4983 6742 2.946762 GGCGGTGACTCTTTGTGC 59.053 61.111 0.00 0.00 0.00 4.57
4995 6754 1.291877 CTTTGTGCGGTTCTCCCTCG 61.292 60.000 0.00 0.00 0.00 4.63
5010 6769 3.794690 CTCGTGAGGACATTGTCGT 57.205 52.632 11.56 11.56 32.65 4.34
5012 6771 0.038618 TCGTGAGGACATTGTCGTGG 60.039 55.000 16.16 6.19 32.65 4.94
5019 6778 2.301870 AGGACATTGTCGTGGAGCTTAA 59.698 45.455 11.00 0.00 32.65 1.85
5025 6784 2.695359 TGTCGTGGAGCTTAATTGTCC 58.305 47.619 0.00 0.00 0.00 4.02
5029 6788 4.021229 TCGTGGAGCTTAATTGTCCTAGA 58.979 43.478 0.00 0.00 0.00 2.43
5037 6796 5.186409 AGCTTAATTGTCCTAGAACGTGGTA 59.814 40.000 0.00 0.00 0.00 3.25
5040 6799 5.670792 AATTGTCCTAGAACGTGGTATGA 57.329 39.130 0.00 0.00 0.00 2.15
5060 6819 1.395608 ACGTTGTCTTTGTGTTGTCCG 59.604 47.619 0.00 0.00 0.00 4.79
5066 6825 4.200874 TGTCTTTGTGTTGTCCGGTTATT 58.799 39.130 0.00 0.00 0.00 1.40
5089 6848 3.181329 TGGGATCTGCTTTGTAAGAGGA 58.819 45.455 0.00 0.00 0.00 3.71
5101 6860 4.202245 TGTAAGAGGATTGCCACACTAC 57.798 45.455 0.00 0.00 36.29 2.73
5106 6865 0.811281 GGATTGCCACACTACCTTGC 59.189 55.000 0.00 0.00 0.00 4.01
5108 6867 2.094675 GATTGCCACACTACCTTGCAT 58.905 47.619 0.00 0.00 0.00 3.96
5109 6868 1.993956 TTGCCACACTACCTTGCATT 58.006 45.000 0.00 0.00 0.00 3.56
5115 6874 3.317711 CCACACTACCTTGCATTGTTCAA 59.682 43.478 0.00 0.00 0.00 2.69
5126 6886 4.941657 TGCATTGTTCAACTGTGCATTTA 58.058 34.783 14.03 0.00 40.51 1.40
5129 6889 5.463061 GCATTGTTCAACTGTGCATTTAGTT 59.537 36.000 11.38 7.80 37.61 2.24
5132 6892 5.960113 TGTTCAACTGTGCATTTAGTTTGT 58.040 33.333 10.18 0.00 35.08 2.83
5134 6894 4.358851 TCAACTGTGCATTTAGTTTGTGC 58.641 39.130 10.18 0.00 35.08 4.57
5152 6912 9.614792 AGTTTGTGCTTTATCTATAAAGTAGGG 57.385 33.333 18.85 1.07 46.78 3.53
5177 6937 9.507280 GGTGAATACATGTTTCATGAACTTATG 57.493 33.333 19.43 14.35 39.08 1.90
5184 6944 4.391830 TGTTTCATGAACTTATGGACGAGC 59.608 41.667 7.89 0.00 39.08 5.03
5188 6948 1.134367 TGAACTTATGGACGAGCTCGG 59.866 52.381 36.93 20.87 44.95 4.63
5217 6977 2.046314 CACCACCCTAGGGCAACG 60.046 66.667 28.88 14.54 39.32 4.10
5303 7180 2.437897 CCAGGGCAGCTTCCAAGT 59.562 61.111 4.34 0.00 0.00 3.16
5402 7283 3.082579 GCCGTGGATCTCGCTTCCT 62.083 63.158 0.00 0.00 34.17 3.36
5425 7306 0.178767 CAGATCCGTCAAGGCATGGA 59.821 55.000 0.00 0.00 40.77 3.41
5435 7316 4.360643 GGCATGGATTTGGCCAGA 57.639 55.556 5.11 0.08 46.92 3.86
5436 7317 2.830475 GGCATGGATTTGGCCAGAT 58.170 52.632 8.85 8.85 46.92 2.90
5437 7318 1.125633 GGCATGGATTTGGCCAGATT 58.874 50.000 10.61 0.00 46.92 2.40
5443 7324 2.222027 GGATTTGGCCAGATTAGGACG 58.778 52.381 10.61 0.00 40.67 4.79
5461 7342 2.420568 GCGTGATGGGACCGGTCTA 61.421 63.158 32.52 22.27 0.00 2.59
5491 7372 1.067582 GGTCCTCTACCGGCATTCG 59.932 63.158 0.00 0.00 38.88 3.34
5515 7396 1.449601 CCCCGTTCGTCTTCATGGG 60.450 63.158 0.00 0.00 36.37 4.00
5549 7430 1.072015 GATCCAGCTAGCTGCCAGATT 59.928 52.381 34.82 17.64 44.23 2.40
5584 7465 1.868498 TCCGGTGAAAATTGTGTCGAC 59.132 47.619 9.11 9.11 0.00 4.20
5586 7467 3.061322 CCGGTGAAAATTGTGTCGACTA 58.939 45.455 17.92 2.84 0.00 2.59
5588 7469 3.421312 CGGTGAAAATTGTGTCGACTACG 60.421 47.826 17.92 0.02 41.26 3.51
5596 7477 0.731855 GTGTCGACTACGGTCTTGGC 60.732 60.000 17.92 0.00 40.10 4.52
5601 7482 1.870055 GACTACGGTCTTGGCGGACA 61.870 60.000 11.44 0.00 39.24 4.02
5608 7489 3.814268 CTTGGCGGACAATGGCGG 61.814 66.667 0.00 0.00 38.65 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.581934 CGTTGGTGTCAAGCTCAGAA 58.418 50.000 0.00 0.00 32.92 3.02
93 95 3.573967 GGTGAGGTGGTGATTTGTCATTT 59.426 43.478 0.00 0.00 0.00 2.32
100 102 0.324943 CTCGGGTGAGGTGGTGATTT 59.675 55.000 0.00 0.00 38.65 2.17
477 480 5.104693 TGGAAACCAGTCTGTTCAAGTAAGA 60.105 40.000 0.00 0.00 0.00 2.10
533 536 1.195115 CTTCGGATCCTTCCCTGACA 58.805 55.000 10.75 0.00 39.01 3.58
629 632 2.092995 CACGCGTGTGGATCGATTTTAA 59.907 45.455 30.50 0.00 42.59 1.52
630 633 1.656594 CACGCGTGTGGATCGATTTTA 59.343 47.619 30.50 0.00 42.59 1.52
736 740 3.445518 CTGCAATCCTAGCCGCCGA 62.446 63.158 0.00 0.00 0.00 5.54
748 752 2.437359 GTCTCTGGCGGCTGCAAT 60.437 61.111 21.31 0.00 45.35 3.56
806 810 6.870965 GGAGCTATGTAGGATTGTGTATTCTG 59.129 42.308 0.00 0.00 0.00 3.02
807 811 6.294787 CGGAGCTATGTAGGATTGTGTATTCT 60.295 42.308 0.00 0.00 0.00 2.40
808 812 5.864474 CGGAGCTATGTAGGATTGTGTATTC 59.136 44.000 0.00 0.00 0.00 1.75
809 813 5.304614 ACGGAGCTATGTAGGATTGTGTATT 59.695 40.000 0.00 0.00 0.00 1.89
810 814 4.833380 ACGGAGCTATGTAGGATTGTGTAT 59.167 41.667 0.00 0.00 0.00 2.29
811 815 4.037565 CACGGAGCTATGTAGGATTGTGTA 59.962 45.833 0.00 0.00 0.00 2.90
812 816 3.031736 ACGGAGCTATGTAGGATTGTGT 58.968 45.455 0.00 0.00 0.00 3.72
813 817 3.181475 ACACGGAGCTATGTAGGATTGTG 60.181 47.826 0.00 0.00 0.00 3.33
814 818 3.031736 ACACGGAGCTATGTAGGATTGT 58.968 45.455 0.00 0.00 0.00 2.71
815 819 3.384668 CACACGGAGCTATGTAGGATTG 58.615 50.000 0.00 0.00 0.00 2.67
816 820 2.365617 CCACACGGAGCTATGTAGGATT 59.634 50.000 0.00 0.00 0.00 3.01
817 821 1.964223 CCACACGGAGCTATGTAGGAT 59.036 52.381 0.00 0.00 0.00 3.24
818 822 1.064240 TCCACACGGAGCTATGTAGGA 60.064 52.381 0.00 0.00 35.91 2.94
819 823 1.399714 TCCACACGGAGCTATGTAGG 58.600 55.000 0.00 0.00 35.91 3.18
834 838 1.021390 CGAGTTCCATGTGGCTCCAC 61.021 60.000 11.95 11.95 46.33 4.02
835 839 1.296392 CGAGTTCCATGTGGCTCCA 59.704 57.895 0.00 0.00 34.44 3.86
836 840 2.109126 GCGAGTTCCATGTGGCTCC 61.109 63.158 0.00 0.00 34.44 4.70
897 901 1.876714 CGACGGGTAATGTCTGCGG 60.877 63.158 0.00 0.00 34.17 5.69
933 944 4.739137 GCCCTTTTAATTTGTCTGTGTGCA 60.739 41.667 0.00 0.00 0.00 4.57
934 945 3.740832 GCCCTTTTAATTTGTCTGTGTGC 59.259 43.478 0.00 0.00 0.00 4.57
935 946 3.980775 CGCCCTTTTAATTTGTCTGTGTG 59.019 43.478 0.00 0.00 0.00 3.82
947 958 2.037511 TCGTTTCTCTCCGCCCTTTTAA 59.962 45.455 0.00 0.00 0.00 1.52
948 959 1.619827 TCGTTTCTCTCCGCCCTTTTA 59.380 47.619 0.00 0.00 0.00 1.52
951 962 1.292541 GTCGTTTCTCTCCGCCCTT 59.707 57.895 0.00 0.00 0.00 3.95
952 963 2.971452 GTCGTTTCTCTCCGCCCT 59.029 61.111 0.00 0.00 0.00 5.19
953 964 2.506438 CGTCGTTTCTCTCCGCCC 60.506 66.667 0.00 0.00 0.00 6.13
957 968 2.506438 CGCCCGTCGTTTCTCTCC 60.506 66.667 0.00 0.00 0.00 3.71
1017 1031 4.517703 GCCGACGACGACGAGGAG 62.518 72.222 20.63 5.41 42.66 3.69
1095 1109 2.202623 CCGAAGAGGAAGGCGACG 60.203 66.667 0.00 0.00 45.00 5.12
1100 1114 1.737363 CGAAGAAGCCGAAGAGGAAGG 60.737 57.143 0.00 0.00 45.00 3.46
1176 1190 2.001361 CTGCTACCCCGTACTCACCG 62.001 65.000 0.00 0.00 0.00 4.94
1185 1199 1.219935 GGTTACCACTGCTACCCCG 59.780 63.158 0.00 0.00 0.00 5.73
1186 1200 0.989602 AAGGTTACCACTGCTACCCC 59.010 55.000 3.51 0.00 0.00 4.95
1219 1233 6.156519 CGCATGCAGGTAATAACTGATAGTA 58.843 40.000 19.57 0.00 38.20 1.82
1220 1234 4.991056 CGCATGCAGGTAATAACTGATAGT 59.009 41.667 19.57 0.00 38.20 2.12
1221 1235 4.389992 CCGCATGCAGGTAATAACTGATAG 59.610 45.833 19.57 0.00 38.20 2.08
1277 1303 1.419374 CAGGGTCAAGAGAAACGTCG 58.581 55.000 0.00 0.00 0.00 5.12
1302 1328 1.872313 ACTACGCGCTCTAGTATGACC 59.128 52.381 5.73 0.00 0.00 4.02
1303 1329 3.740321 AGTACTACGCGCTCTAGTATGAC 59.260 47.826 19.15 12.38 31.02 3.06
1316 1342 5.912360 AGTGGTAAAAACAAGTACTACGC 57.088 39.130 0.00 0.00 36.95 4.42
1317 1343 8.482429 CAACTAGTGGTAAAAACAAGTACTACG 58.518 37.037 0.00 0.00 36.95 3.51
1318 1344 9.533253 TCAACTAGTGGTAAAAACAAGTACTAC 57.467 33.333 0.00 0.00 33.29 2.73
1321 1347 9.101655 TCTTCAACTAGTGGTAAAAACAAGTAC 57.898 33.333 0.00 0.00 0.00 2.73
1455 1535 4.637977 GGAGACTTCCAAATGAATGAGGAC 59.362 45.833 0.00 0.00 43.45 3.85
1495 1575 3.494626 GCCGGACAAGTCATACATACATG 59.505 47.826 5.05 0.00 0.00 3.21
1496 1576 3.388024 AGCCGGACAAGTCATACATACAT 59.612 43.478 5.05 0.00 0.00 2.29
1497 1577 2.764010 AGCCGGACAAGTCATACATACA 59.236 45.455 5.05 0.00 0.00 2.29
1498 1578 3.068307 AGAGCCGGACAAGTCATACATAC 59.932 47.826 5.05 0.00 0.00 2.39
1608 1688 6.742109 AGGAAACAAGTATGATTGCATATGC 58.258 36.000 21.09 21.09 39.09 3.14
1632 1712 8.666573 CAATTAATGCAGTGCAATAATTTGGAA 58.333 29.630 33.59 14.33 46.07 3.53
1662 1742 6.529125 GTGGTGCACTCTGAATGAAATTAATG 59.471 38.462 17.98 0.00 36.07 1.90
1675 1755 2.158914 TGGCTATATGTGGTGCACTCTG 60.159 50.000 17.98 0.34 35.11 3.35
1712 1792 5.428253 TCATCTATTTTGGAACGGAGGAAG 58.572 41.667 0.00 0.00 0.00 3.46
1713 1793 5.429681 TCATCTATTTTGGAACGGAGGAA 57.570 39.130 0.00 0.00 0.00 3.36
1714 1794 5.454755 GGATCATCTATTTTGGAACGGAGGA 60.455 44.000 0.00 0.00 0.00 3.71
1715 1795 4.757149 GGATCATCTATTTTGGAACGGAGG 59.243 45.833 0.00 0.00 0.00 4.30
1716 1796 5.368145 TGGATCATCTATTTTGGAACGGAG 58.632 41.667 0.00 0.00 0.00 4.63
1717 1797 5.366482 TGGATCATCTATTTTGGAACGGA 57.634 39.130 0.00 0.00 0.00 4.69
1718 1798 5.590259 AGTTGGATCATCTATTTTGGAACGG 59.410 40.000 0.00 0.00 0.00 4.44
1719 1799 6.683974 AGTTGGATCATCTATTTTGGAACG 57.316 37.500 0.00 0.00 0.00 3.95
1720 1800 8.306761 ACAAAGTTGGATCATCTATTTTGGAAC 58.693 33.333 11.01 0.00 0.00 3.62
1721 1801 8.421249 ACAAAGTTGGATCATCTATTTTGGAA 57.579 30.769 11.01 0.00 0.00 3.53
1722 1802 8.956426 GTACAAAGTTGGATCATCTATTTTGGA 58.044 33.333 11.01 2.87 0.00 3.53
1723 1803 8.960591 AGTACAAAGTTGGATCATCTATTTTGG 58.039 33.333 11.01 0.00 0.00 3.28
1727 1807 9.614792 GGTTAGTACAAAGTTGGATCATCTATT 57.385 33.333 0.00 0.00 0.00 1.73
1728 1808 8.993424 AGGTTAGTACAAAGTTGGATCATCTAT 58.007 33.333 0.00 0.00 0.00 1.98
1729 1809 8.375493 AGGTTAGTACAAAGTTGGATCATCTA 57.625 34.615 0.00 0.00 0.00 1.98
1730 1810 7.259088 AGGTTAGTACAAAGTTGGATCATCT 57.741 36.000 0.00 0.00 0.00 2.90
1731 1811 7.923414 AAGGTTAGTACAAAGTTGGATCATC 57.077 36.000 0.00 0.00 0.00 2.92
1732 1812 8.603304 ACTAAGGTTAGTACAAAGTTGGATCAT 58.397 33.333 0.32 0.00 41.92 2.45
1733 1813 7.970102 ACTAAGGTTAGTACAAAGTTGGATCA 58.030 34.615 0.32 0.00 41.92 2.92
1746 1826 7.289782 TGACCCAACTTTGTACTAAGGTTAGTA 59.710 37.037 19.08 5.64 43.36 1.82
1747 1827 6.100134 TGACCCAACTTTGTACTAAGGTTAGT 59.900 38.462 19.08 12.61 45.39 2.24
1748 1828 6.527423 TGACCCAACTTTGTACTAAGGTTAG 58.473 40.000 19.08 9.91 36.82 2.34
1749 1829 6.497624 TGACCCAACTTTGTACTAAGGTTA 57.502 37.500 19.08 4.72 0.00 2.85
1750 1830 5.376756 TGACCCAACTTTGTACTAAGGTT 57.623 39.130 19.08 9.89 0.00 3.50
1751 1831 5.309806 AGATGACCCAACTTTGTACTAAGGT 59.690 40.000 19.08 11.48 0.00 3.50
1752 1832 5.805728 AGATGACCCAACTTTGTACTAAGG 58.194 41.667 19.08 6.74 0.00 2.69
1753 1833 9.449719 AAATAGATGACCCAACTTTGTACTAAG 57.550 33.333 14.42 14.42 0.00 2.18
1754 1834 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
1755 1835 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
1756 1836 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
1757 1837 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
1758 1838 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
1759 1839 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
1760 1840 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
1761 1841 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1762 1842 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1763 1843 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1764 1844 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
1765 1845 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
1766 1846 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
1767 1847 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
1768 1848 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
1769 1849 4.571176 GTCCTCCGTTCCAAAATAGATGAC 59.429 45.833 0.00 0.00 0.00 3.06
1770 1850 4.224147 TGTCCTCCGTTCCAAAATAGATGA 59.776 41.667 0.00 0.00 0.00 2.92
1771 1851 4.513442 TGTCCTCCGTTCCAAAATAGATG 58.487 43.478 0.00 0.00 0.00 2.90
1772 1852 4.837093 TGTCCTCCGTTCCAAAATAGAT 57.163 40.909 0.00 0.00 0.00 1.98
1773 1853 4.627284 TTGTCCTCCGTTCCAAAATAGA 57.373 40.909 0.00 0.00 0.00 1.98
1774 1854 4.941263 TGATTGTCCTCCGTTCCAAAATAG 59.059 41.667 0.00 0.00 0.00 1.73
1775 1855 4.912586 TGATTGTCCTCCGTTCCAAAATA 58.087 39.130 0.00 0.00 0.00 1.40
1776 1856 3.761897 TGATTGTCCTCCGTTCCAAAAT 58.238 40.909 0.00 0.00 0.00 1.82
1777 1857 3.216187 TGATTGTCCTCCGTTCCAAAA 57.784 42.857 0.00 0.00 0.00 2.44
1778 1858 2.940994 TGATTGTCCTCCGTTCCAAA 57.059 45.000 0.00 0.00 0.00 3.28
1779 1859 2.940994 TTGATTGTCCTCCGTTCCAA 57.059 45.000 0.00 0.00 0.00 3.53
1780 1860 3.433306 AATTGATTGTCCTCCGTTCCA 57.567 42.857 0.00 0.00 0.00 3.53
1781 1861 4.217550 TGAAAATTGATTGTCCTCCGTTCC 59.782 41.667 0.00 0.00 0.00 3.62
1782 1862 5.371115 TGAAAATTGATTGTCCTCCGTTC 57.629 39.130 0.00 0.00 0.00 3.95
1783 1863 4.321230 GCTGAAAATTGATTGTCCTCCGTT 60.321 41.667 0.00 0.00 0.00 4.44
1784 1864 3.191371 GCTGAAAATTGATTGTCCTCCGT 59.809 43.478 0.00 0.00 0.00 4.69
1785 1865 3.441572 AGCTGAAAATTGATTGTCCTCCG 59.558 43.478 0.00 0.00 0.00 4.63
1786 1866 4.142293 GGAGCTGAAAATTGATTGTCCTCC 60.142 45.833 0.00 4.47 30.50 4.30
1787 1867 4.142293 GGGAGCTGAAAATTGATTGTCCTC 60.142 45.833 0.00 0.00 0.00 3.71
1788 1868 3.766051 GGGAGCTGAAAATTGATTGTCCT 59.234 43.478 0.00 0.00 0.00 3.85
1789 1869 3.118992 GGGGAGCTGAAAATTGATTGTCC 60.119 47.826 0.00 0.00 0.00 4.02
1790 1870 3.766051 AGGGGAGCTGAAAATTGATTGTC 59.234 43.478 0.00 0.00 0.00 3.18
1796 1876 1.259609 TGCAGGGGAGCTGAAAATTG 58.740 50.000 0.00 0.00 34.99 2.32
1818 1898 1.542915 GCATGCATTTGGAGCGGATAT 59.457 47.619 14.21 0.00 33.85 1.63
1819 1899 0.953727 GCATGCATTTGGAGCGGATA 59.046 50.000 14.21 0.00 33.85 2.59
1821 1901 1.378882 GAGCATGCATTTGGAGCGGA 61.379 55.000 21.98 0.00 33.85 5.54
1840 2565 7.566868 GCGTTAAATTTAGTGCAAGAAAAGGTG 60.567 37.037 15.09 0.00 0.00 4.00
1841 2566 6.419710 GCGTTAAATTTAGTGCAAGAAAAGGT 59.580 34.615 15.09 0.00 0.00 3.50
1842 2567 6.640907 AGCGTTAAATTTAGTGCAAGAAAAGG 59.359 34.615 19.61 3.53 0.00 3.11
1844 2569 7.197017 TCAGCGTTAAATTTAGTGCAAGAAAA 58.803 30.769 19.61 0.00 0.00 2.29
1845 2570 6.730175 TCAGCGTTAAATTTAGTGCAAGAAA 58.270 32.000 19.61 0.00 0.00 2.52
1846 2571 6.017440 ACTCAGCGTTAAATTTAGTGCAAGAA 60.017 34.615 19.61 6.77 0.00 2.52
1848 2573 5.689819 ACTCAGCGTTAAATTTAGTGCAAG 58.310 37.500 19.61 17.71 0.00 4.01
1867 2592 7.939784 TTGAGTCTGCTAGAAATACTACTCA 57.060 36.000 0.00 0.00 37.40 3.41
1945 3061 3.551890 AGCTAGTATGACGACATTTTGCG 59.448 43.478 5.55 0.00 37.87 4.85
1953 3069 3.750652 GGGGTACTAGCTAGTATGACGAC 59.249 52.174 31.04 21.29 40.55 4.34
1971 3087 1.280998 CTATTTGTGAACGGAGGGGGT 59.719 52.381 0.00 0.00 0.00 4.95
1973 3089 2.236395 ACTCTATTTGTGAACGGAGGGG 59.764 50.000 0.00 0.00 0.00 4.79
2016 3133 9.524106 TTTGTGTTCGTATGTAGTCTATATTGG 57.476 33.333 0.00 0.00 0.00 3.16
2036 3153 7.354751 AGTGTGTTTATTTACCCATTTGTGT 57.645 32.000 0.00 0.00 0.00 3.72
2037 3154 9.751542 TTTAGTGTGTTTATTTACCCATTTGTG 57.248 29.630 0.00 0.00 0.00 3.33
2111 3228 9.757227 CTTTGACATTCCACCTTTATACAAAAA 57.243 29.630 0.00 0.00 0.00 1.94
2113 3230 7.014711 TGCTTTGACATTCCACCTTTATACAAA 59.985 33.333 0.00 0.00 0.00 2.83
2123 3254 3.256631 AGAACATGCTTTGACATTCCACC 59.743 43.478 0.00 0.00 0.00 4.61
2143 3274 2.183300 CGACCCGGCGAATCAAGA 59.817 61.111 9.30 0.00 0.00 3.02
2144 3275 2.125673 ACGACCCGGCGAATCAAG 60.126 61.111 9.30 0.00 34.83 3.02
2155 3286 0.457035 TATGGTAAGCGTGACGACCC 59.543 55.000 10.10 2.24 0.00 4.46
2186 3317 2.287915 GCATGCACGTATACAAGGGAAG 59.712 50.000 14.21 0.00 0.00 3.46
2195 3326 0.874175 GGCGACTGCATGCACGTATA 60.874 55.000 25.59 3.02 45.35 1.47
2196 3327 2.173669 GGCGACTGCATGCACGTAT 61.174 57.895 25.59 10.00 45.35 3.06
2229 3360 1.377725 CCTGCCATTCTGTTCGGCT 60.378 57.895 0.00 0.00 46.39 5.52
2293 3433 8.120465 CGTACCTTGTGTGGAATTATTATTGTC 58.880 37.037 0.00 0.00 0.00 3.18
2294 3434 7.608761 ACGTACCTTGTGTGGAATTATTATTGT 59.391 33.333 0.00 0.00 0.00 2.71
2295 3435 7.981142 ACGTACCTTGTGTGGAATTATTATTG 58.019 34.615 0.00 0.00 0.00 1.90
2310 3450 7.857885 GCGTTAGTTCTAATATACGTACCTTGT 59.142 37.037 0.00 0.00 0.00 3.16
2328 3468 3.993584 TCACCGGCCGCGTTAGTT 61.994 61.111 22.85 0.00 0.00 2.24
2338 3478 2.282701 TAAAGATACGTGTCACCGGC 57.717 50.000 15.08 0.00 0.00 6.13
2430 3595 2.749776 CTTAGCCAAAAACAAACCCCG 58.250 47.619 0.00 0.00 0.00 5.73
2520 3688 2.434702 CGGCACCCTAACCTATCTTCTT 59.565 50.000 0.00 0.00 0.00 2.52
2562 3732 9.661563 CCATCGTTTACTATTAGGCCATTATTA 57.338 33.333 5.01 0.00 0.00 0.98
2770 3963 4.629200 AGCTTCGTGCAACAAAAATTGAAA 59.371 33.333 0.00 0.00 45.94 2.69
2784 3977 4.974591 AGAATGTTGAAATAGCTTCGTGC 58.025 39.130 0.00 0.00 43.29 5.34
2788 3981 7.846592 GCGTAGTTAGAATGTTGAAATAGCTTC 59.153 37.037 0.00 0.00 34.31 3.86
2796 3989 9.654417 GTTAAAAAGCGTAGTTAGAATGTTGAA 57.346 29.630 0.00 0.00 0.00 2.69
2799 3992 7.854534 ACGTTAAAAAGCGTAGTTAGAATGTT 58.145 30.769 0.00 0.00 39.72 2.71
2800 3993 7.412137 ACGTTAAAAAGCGTAGTTAGAATGT 57.588 32.000 0.00 0.00 39.72 2.71
2810 4003 8.594687 GGATATTGAACTACGTTAAAAAGCGTA 58.405 33.333 0.00 0.00 41.77 4.42
2814 4333 9.716507 CCATGGATATTGAACTACGTTAAAAAG 57.283 33.333 5.56 0.00 0.00 2.27
2836 4355 4.435425 CCAAATGTAATCACTTGGCCATG 58.565 43.478 16.76 16.76 42.56 3.66
2854 4373 3.381908 ACGTTGTGGAAAACATAGCCAAA 59.618 39.130 0.00 0.00 38.99 3.28
2878 4397 5.914898 TCACTTGACCTCAGATATTCGAA 57.085 39.130 0.00 0.00 0.00 3.71
2889 4408 2.777832 AGCCAGAATCACTTGACCTC 57.222 50.000 0.00 0.00 0.00 3.85
2899 4418 6.158598 TCAACAAAGCAAATTAGCCAGAATC 58.841 36.000 0.00 0.00 34.23 2.52
2969 4488 1.743252 GGCTGCCTCGTCCTTCTTG 60.743 63.158 12.43 0.00 0.00 3.02
3026 4545 3.901222 TCATGTCAGTTCTTCCAGGTACA 59.099 43.478 0.00 0.00 0.00 2.90
3027 4546 4.537135 TCATGTCAGTTCTTCCAGGTAC 57.463 45.455 0.00 0.00 0.00 3.34
3028 4547 5.762179 ATTCATGTCAGTTCTTCCAGGTA 57.238 39.130 0.00 0.00 0.00 3.08
3029 4548 4.647564 ATTCATGTCAGTTCTTCCAGGT 57.352 40.909 0.00 0.00 0.00 4.00
3030 4549 7.308435 GTTTTATTCATGTCAGTTCTTCCAGG 58.692 38.462 0.00 0.00 0.00 4.45
3031 4550 7.017645 CGTTTTATTCATGTCAGTTCTTCCAG 58.982 38.462 0.00 0.00 0.00 3.86
3032 4551 6.708502 TCGTTTTATTCATGTCAGTTCTTCCA 59.291 34.615 0.00 0.00 0.00 3.53
3033 4552 7.015877 GTCGTTTTATTCATGTCAGTTCTTCC 58.984 38.462 0.00 0.00 0.00 3.46
3034 4553 7.742089 CAGTCGTTTTATTCATGTCAGTTCTTC 59.258 37.037 0.00 0.00 0.00 2.87
3035 4554 7.307989 CCAGTCGTTTTATTCATGTCAGTTCTT 60.308 37.037 0.00 0.00 0.00 2.52
3036 4555 6.147821 CCAGTCGTTTTATTCATGTCAGTTCT 59.852 38.462 0.00 0.00 0.00 3.01
3041 4560 7.915293 ATTACCAGTCGTTTTATTCATGTCA 57.085 32.000 0.00 0.00 0.00 3.58
3084 4603 6.738453 GCCAAAACAAACAGTGGATGAGTTAT 60.738 38.462 4.63 0.00 32.54 1.89
3127 4646 6.656945 AGTACAACTACGTATGATGATCGAC 58.343 40.000 3.25 0.00 0.00 4.20
3144 4663 7.820872 ACTGTAAGAGAGACTAGAGAGTACAAC 59.179 40.741 0.00 0.00 34.24 3.32
3146 4665 7.484993 ACTGTAAGAGAGACTAGAGAGTACA 57.515 40.000 0.00 0.00 34.24 2.90
3168 4688 6.595716 GCTGGTCAATCATCAGTAAACTAACT 59.404 38.462 0.00 0.00 0.00 2.24
3207 4739 4.723862 CGCTTGCACGTTATCTGAATTAAC 59.276 41.667 0.00 0.00 0.00 2.01
3322 4854 1.800586 TGACGTTGCTCTCATTCTTGC 59.199 47.619 0.00 0.00 0.00 4.01
3351 4889 3.692791 AAGTTTTCGTGGCAAGAACTC 57.307 42.857 15.43 11.09 30.77 3.01
3356 4894 4.915704 TGAAGTTAAGTTTTCGTGGCAAG 58.084 39.130 0.00 0.00 0.00 4.01
3357 4895 4.966965 TGAAGTTAAGTTTTCGTGGCAA 57.033 36.364 0.00 0.00 0.00 4.52
3358 4896 4.966965 TTGAAGTTAAGTTTTCGTGGCA 57.033 36.364 0.00 0.00 0.00 4.92
3359 4897 4.611366 CGATTGAAGTTAAGTTTTCGTGGC 59.389 41.667 12.28 0.00 0.00 5.01
3360 4898 5.744490 ACGATTGAAGTTAAGTTTTCGTGG 58.256 37.500 19.83 4.92 37.22 4.94
3362 4900 6.592798 TGACGATTGAAGTTAAGTTTTCGT 57.407 33.333 20.27 20.27 40.83 3.85
3369 4908 5.779806 ACCGATTGACGATTGAAGTTAAG 57.220 39.130 0.00 0.00 45.77 1.85
3372 4911 4.992319 TGTTACCGATTGACGATTGAAGTT 59.008 37.500 0.00 0.00 45.77 2.66
3378 4917 5.356426 TCATCATGTTACCGATTGACGATT 58.644 37.500 0.00 0.00 45.77 3.34
3382 4921 7.534085 TTTACTCATCATGTTACCGATTGAC 57.466 36.000 0.00 0.00 0.00 3.18
3383 4922 7.201487 CGTTTTACTCATCATGTTACCGATTGA 60.201 37.037 0.00 0.00 0.00 2.57
3384 4923 6.899771 CGTTTTACTCATCATGTTACCGATTG 59.100 38.462 0.00 0.00 0.00 2.67
3386 4925 6.103997 ACGTTTTACTCATCATGTTACCGAT 58.896 36.000 0.00 0.00 0.00 4.18
3387 4926 5.472148 ACGTTTTACTCATCATGTTACCGA 58.528 37.500 0.00 0.00 0.00 4.69
3390 4929 5.723135 GCCGACGTTTTACTCATCATGTTAC 60.723 44.000 0.00 0.00 0.00 2.50
3392 4931 3.124636 GCCGACGTTTTACTCATCATGTT 59.875 43.478 0.00 0.00 0.00 2.71
3393 4932 2.671396 GCCGACGTTTTACTCATCATGT 59.329 45.455 0.00 0.00 0.00 3.21
3397 4936 0.643820 CGGCCGACGTTTTACTCATC 59.356 55.000 24.07 0.00 37.93 2.92
3398 4937 1.356527 GCGGCCGACGTTTTACTCAT 61.357 55.000 33.48 0.00 46.52 2.90
3400 4939 1.356527 ATGCGGCCGACGTTTTACTC 61.357 55.000 33.48 7.30 46.52 2.59
3512 5078 0.179045 ATAGAGGATGGTGCGGTTGC 60.179 55.000 0.00 0.00 43.20 4.17
3519 5085 0.034059 GCGGGACATAGAGGATGGTG 59.966 60.000 0.00 0.00 40.18 4.17
3623 5189 2.125912 CGCTCAGGGTCTTGACCG 60.126 66.667 12.97 1.61 0.00 4.79
4003 5569 2.431057 AGAAGATGTCCCGGATGTACAC 59.569 50.000 0.73 0.00 0.00 2.90
4065 5631 2.888998 GCCGGTCGCGTTCTTGTTT 61.889 57.895 5.77 0.00 0.00 2.83
4293 5868 2.966309 GAAGTTTGTGAGCCCGGCG 61.966 63.158 3.05 0.00 0.00 6.46
4494 6069 3.231818 CTTATGTATGGACTCCGGGTCT 58.768 50.000 18.67 6.56 43.97 3.85
4663 6240 3.769844 ACGAAGGGAGTATGTGACATTCT 59.230 43.478 2.29 3.41 0.00 2.40
4664 6241 4.124851 ACGAAGGGAGTATGTGACATTC 57.875 45.455 2.29 0.00 0.00 2.67
4665 6242 5.670792 TTACGAAGGGAGTATGTGACATT 57.329 39.130 2.29 0.00 0.00 2.71
4666 6243 5.187186 AGTTTACGAAGGGAGTATGTGACAT 59.813 40.000 2.65 2.65 0.00 3.06
4667 6244 4.525487 AGTTTACGAAGGGAGTATGTGACA 59.475 41.667 0.00 0.00 0.00 3.58
4668 6245 5.069501 AGTTTACGAAGGGAGTATGTGAC 57.930 43.478 0.00 0.00 0.00 3.67
4669 6246 6.839124 TTAGTTTACGAAGGGAGTATGTGA 57.161 37.500 0.00 0.00 0.00 3.58
4675 6252 8.358895 GCTCTTATATTAGTTTACGAAGGGAGT 58.641 37.037 0.00 0.00 0.00 3.85
4676 6253 8.358148 TGCTCTTATATTAGTTTACGAAGGGAG 58.642 37.037 0.00 0.00 0.00 4.30
4677 6254 8.241497 TGCTCTTATATTAGTTTACGAAGGGA 57.759 34.615 0.00 0.00 0.00 4.20
4678 6255 9.490379 AATGCTCTTATATTAGTTTACGAAGGG 57.510 33.333 0.00 0.00 0.00 3.95
4707 6284 9.250624 AGCGTTGAGATAACTAAAATAGTGATC 57.749 33.333 6.73 6.73 44.00 2.92
4708 6285 9.250624 GAGCGTTGAGATAACTAAAATAGTGAT 57.749 33.333 0.00 0.00 39.39 3.06
4709 6286 8.467598 AGAGCGTTGAGATAACTAAAATAGTGA 58.532 33.333 0.00 0.00 39.39 3.41
4710 6287 8.635877 AGAGCGTTGAGATAACTAAAATAGTG 57.364 34.615 0.00 0.00 39.39 2.74
4724 6301 9.731819 CTGTAAACTAATATAAGAGCGTTGAGA 57.268 33.333 0.00 0.00 0.00 3.27
4725 6302 9.731819 TCTGTAAACTAATATAAGAGCGTTGAG 57.268 33.333 0.00 0.00 0.00 3.02
4726 6303 9.731819 CTCTGTAAACTAATATAAGAGCGTTGA 57.268 33.333 0.00 0.00 0.00 3.18
4727 6304 8.969267 CCTCTGTAAACTAATATAAGAGCGTTG 58.031 37.037 0.00 0.00 0.00 4.10
4728 6305 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
4729 6306 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
4730 6307 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
4731 6308 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
4765 6342 9.388346 CACGCAGATGTTACAGTTTTAAAAATA 57.612 29.630 1.31 0.00 0.00 1.40
4775 6352 3.575630 CAGTACACGCAGATGTTACAGT 58.424 45.455 0.00 0.00 33.85 3.55
4783 6360 3.384789 ACATATCACCAGTACACGCAGAT 59.615 43.478 0.00 0.00 0.00 2.90
4799 6376 6.925610 TCAAGCTCATTACACCAACATATC 57.074 37.500 0.00 0.00 0.00 1.63
4858 6435 9.445878 TCATGCTATATCATTCTCTGATTTTCC 57.554 33.333 0.00 0.00 42.07 3.13
4919 6496 7.090808 GGTATGAATTGGGTTTCTCTCAAAAC 58.909 38.462 0.00 0.00 40.17 2.43
4933 6510 6.461509 GCCATAAGTTCAAGGGTATGAATTGG 60.462 42.308 0.00 0.00 41.09 3.16
4939 6516 2.878406 CGGCCATAAGTTCAAGGGTATG 59.122 50.000 2.24 0.00 0.00 2.39
4970 6729 1.527311 GAGAACCGCACAAAGAGTCAC 59.473 52.381 0.00 0.00 0.00 3.67
4975 6734 0.034896 GAGGGAGAACCGCACAAAGA 59.965 55.000 0.00 0.00 46.96 2.52
4976 6735 1.291877 CGAGGGAGAACCGCACAAAG 61.292 60.000 0.00 0.00 46.96 2.77
4983 6742 2.885861 CCTCACGAGGGAGAACCG 59.114 66.667 3.55 0.00 46.96 4.44
4995 6754 1.714794 CTCCACGACAATGTCCTCAC 58.285 55.000 7.91 0.00 0.00 3.51
5003 6762 3.689649 GGACAATTAAGCTCCACGACAAT 59.310 43.478 0.00 0.00 0.00 2.71
5010 6769 4.222145 ACGTTCTAGGACAATTAAGCTCCA 59.778 41.667 1.17 0.00 0.00 3.86
5012 6771 4.567159 CCACGTTCTAGGACAATTAAGCTC 59.433 45.833 1.17 0.00 0.00 4.09
5019 6778 4.439700 CGTCATACCACGTTCTAGGACAAT 60.440 45.833 1.17 0.00 34.95 2.71
5037 6796 3.064820 GGACAACACAAAGACAACGTCAT 59.935 43.478 0.00 0.00 34.60 3.06
5040 6799 1.395608 CGGACAACACAAAGACAACGT 59.604 47.619 0.00 0.00 0.00 3.99
5048 6807 3.566322 CCAGAATAACCGGACAACACAAA 59.434 43.478 9.46 0.00 0.00 2.83
5060 6819 4.273318 ACAAAGCAGATCCCAGAATAACC 58.727 43.478 0.00 0.00 0.00 2.85
5066 6825 3.198635 CCTCTTACAAAGCAGATCCCAGA 59.801 47.826 0.00 0.00 0.00 3.86
5089 6848 2.220653 ATGCAAGGTAGTGTGGCAAT 57.779 45.000 0.00 0.00 38.08 3.56
5101 6860 2.129607 GCACAGTTGAACAATGCAAGG 58.870 47.619 15.98 0.00 33.21 3.61
5106 6865 7.010367 ACAAACTAAATGCACAGTTGAACAATG 59.990 33.333 10.09 6.95 35.23 2.82
5108 6867 6.309980 CACAAACTAAATGCACAGTTGAACAA 59.690 34.615 10.09 0.00 35.23 2.83
5109 6868 5.804473 CACAAACTAAATGCACAGTTGAACA 59.196 36.000 10.09 0.00 35.23 3.18
5115 6874 4.654091 AAGCACAAACTAAATGCACAGT 57.346 36.364 0.00 0.00 41.97 3.55
5148 6908 7.402054 AGTTCATGAAACATGTATTCACCCTA 58.598 34.615 19.09 7.99 39.43 3.53
5149 6909 6.248433 AGTTCATGAAACATGTATTCACCCT 58.752 36.000 19.09 12.39 39.43 4.34
5152 6912 9.507280 CCATAAGTTCATGAAACATGTATTCAC 57.493 33.333 19.09 10.80 39.43 3.18
5158 6918 5.937540 TCGTCCATAAGTTCATGAAACATGT 59.062 36.000 10.35 0.00 40.56 3.21
5159 6919 6.421377 TCGTCCATAAGTTCATGAAACATG 57.579 37.500 10.35 12.79 40.56 3.21
5160 6920 5.065218 GCTCGTCCATAAGTTCATGAAACAT 59.935 40.000 10.35 1.97 40.56 2.71
5161 6921 4.391830 GCTCGTCCATAAGTTCATGAAACA 59.608 41.667 10.35 0.00 40.56 2.83
5162 6922 4.631813 AGCTCGTCCATAAGTTCATGAAAC 59.368 41.667 10.35 4.88 38.21 2.78
5163 6923 4.832248 AGCTCGTCCATAAGTTCATGAAA 58.168 39.130 10.35 0.00 0.00 2.69
5164 6924 4.433615 GAGCTCGTCCATAAGTTCATGAA 58.566 43.478 3.38 3.38 0.00 2.57
5165 6925 3.489229 CGAGCTCGTCCATAAGTTCATGA 60.489 47.826 27.79 0.00 34.11 3.07
5166 6926 2.791560 CGAGCTCGTCCATAAGTTCATG 59.208 50.000 27.79 0.00 34.11 3.07
5167 6927 2.223829 CCGAGCTCGTCCATAAGTTCAT 60.224 50.000 32.41 0.00 37.74 2.57
5201 6961 4.029809 GCGTTGCCCTAGGGTGGT 62.030 66.667 28.96 0.00 37.65 4.16
5213 6973 1.746615 CCACATCCTCCTGGCGTTG 60.747 63.158 0.00 0.00 0.00 4.10
5214 6974 2.224159 ACCACATCCTCCTGGCGTT 61.224 57.895 0.00 0.00 0.00 4.84
5217 6977 2.273449 CCACCACATCCTCCTGGC 59.727 66.667 0.00 0.00 0.00 4.85
5293 7170 1.598130 GCCACACGACTTGGAAGCT 60.598 57.895 5.99 0.00 36.02 3.74
5382 7263 4.514577 AAGCGAGATCCACGGCCG 62.515 66.667 26.86 26.86 0.00 6.13
5383 7264 2.586357 GAAGCGAGATCCACGGCC 60.586 66.667 10.94 0.00 0.00 6.13
5384 7265 1.735376 TAGGAAGCGAGATCCACGGC 61.735 60.000 10.94 0.31 39.55 5.68
5385 7266 0.312416 CTAGGAAGCGAGATCCACGG 59.688 60.000 10.94 0.00 39.55 4.94
5402 7283 0.975556 TGCCTTGACGGATCTGCCTA 60.976 55.000 0.00 0.00 33.16 3.93
5425 7306 1.680338 GCGTCCTAATCTGGCCAAAT 58.320 50.000 7.01 0.00 0.00 2.32
5435 7316 0.104304 GTCCCATCACGCGTCCTAAT 59.896 55.000 9.86 0.00 0.00 1.73
5436 7317 1.514087 GTCCCATCACGCGTCCTAA 59.486 57.895 9.86 0.00 0.00 2.69
5437 7318 2.420568 GGTCCCATCACGCGTCCTA 61.421 63.158 9.86 0.00 0.00 2.94
5443 7324 2.351336 CTAGACCGGTCCCATCACGC 62.351 65.000 30.82 3.19 0.00 5.34
5459 7340 2.439104 GGACCTCTGGCTGCCCTAG 61.439 68.421 17.53 13.00 0.00 3.02
5461 7342 4.345286 AGGACCTCTGGCTGCCCT 62.345 66.667 17.53 0.29 0.00 5.19
5515 7396 4.593864 GATCCGCGAGCACCCTCC 62.594 72.222 8.23 0.00 34.49 4.30
5562 7443 2.546368 TCGACACAATTTTCACCGGAAG 59.454 45.455 9.46 0.00 33.82 3.46
5584 7465 0.108329 ATTGTCCGCCAAGACCGTAG 60.108 55.000 0.00 0.00 36.25 3.51
5586 7467 1.671054 CATTGTCCGCCAAGACCGT 60.671 57.895 0.00 0.00 36.25 4.83
5588 7469 2.700773 GCCATTGTCCGCCAAGACC 61.701 63.158 0.00 0.00 36.25 3.85
5601 7482 2.125512 GTCAGAGACGCCGCCATT 60.126 61.111 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.