Multiple sequence alignment - TraesCS7A01G235500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G235500 chr7A 100.000 4129 0 0 1 4129 207545573 207549701 0.000000e+00 7625.0
1 TraesCS7A01G235500 chr7D 92.607 3233 111 55 312 3449 198499650 198502849 0.000000e+00 4529.0
2 TraesCS7A01G235500 chr7B 89.924 3533 190 92 97 3536 162925987 162922528 0.000000e+00 4399.0
3 TraesCS7A01G235500 chr7B 84.833 389 37 12 3545 3925 162922562 162922188 5.040000e-99 372.0
4 TraesCS7A01G235500 chr7B 78.788 132 25 3 147 276 639254001 639254131 7.350000e-13 86.1
5 TraesCS7A01G235500 chr6D 82.612 1156 180 15 1845 2997 399219975 399218838 0.000000e+00 1002.0
6 TraesCS7A01G235500 chr6D 73.580 1109 240 47 1847 2936 56551983 56553057 3.900000e-100 375.0
7 TraesCS7A01G235500 chr6D 84.545 110 17 0 2618 2727 44420390 44420281 4.360000e-20 110.0
8 TraesCS7A01G235500 chr6A 82.612 1156 180 14 1845 2997 545319987 545318850 0.000000e+00 1002.0
9 TraesCS7A01G235500 chr6A 73.609 1114 245 45 1847 2943 71066741 71067822 2.330000e-102 383.0
10 TraesCS7A01G235500 chr6B 82.353 1156 183 14 1845 2997 597557864 597556727 0.000000e+00 985.0
11 TraesCS7A01G235500 chr6B 72.956 1113 240 53 1847 2936 127039790 127040864 8.560000e-87 331.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G235500 chr7A 207545573 207549701 4128 False 7625.0 7625 100.0000 1 4129 1 chr7A.!!$F1 4128
1 TraesCS7A01G235500 chr7D 198499650 198502849 3199 False 4529.0 4529 92.6070 312 3449 1 chr7D.!!$F1 3137
2 TraesCS7A01G235500 chr7B 162922188 162925987 3799 True 2385.5 4399 87.3785 97 3925 2 chr7B.!!$R1 3828
3 TraesCS7A01G235500 chr6D 399218838 399219975 1137 True 1002.0 1002 82.6120 1845 2997 1 chr6D.!!$R2 1152
4 TraesCS7A01G235500 chr6D 56551983 56553057 1074 False 375.0 375 73.5800 1847 2936 1 chr6D.!!$F1 1089
5 TraesCS7A01G235500 chr6A 545318850 545319987 1137 True 1002.0 1002 82.6120 1845 2997 1 chr6A.!!$R1 1152
6 TraesCS7A01G235500 chr6A 71066741 71067822 1081 False 383.0 383 73.6090 1847 2943 1 chr6A.!!$F1 1096
7 TraesCS7A01G235500 chr6B 597556727 597557864 1137 True 985.0 985 82.3530 1845 2997 1 chr6B.!!$R1 1152
8 TraesCS7A01G235500 chr6B 127039790 127040864 1074 False 331.0 331 72.9560 1847 2936 1 chr6B.!!$F1 1089

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.032615 AGGAGAGAGTGTGGGCTAGG 60.033 60.0 0.0 0.0 0.00 3.02 F
57 58 0.033011 GGAGAGAGTGTGGGCTAGGA 60.033 60.0 0.0 0.0 0.00 2.94 F
1478 1543 0.036010 AGTGAGTGGATTGGAAGCCG 60.036 55.0 0.0 0.0 37.25 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1633 1706 0.390472 AGTTTAGGACGAGCTGCTGC 60.390 55.000 7.01 7.62 40.05 5.25 R
1702 1800 1.065926 GTGAGATCTGATGCCACCACA 60.066 52.381 0.00 0.00 0.00 4.17 R
3232 3356 0.308993 GTCTGGTTTGTGCTGAGTGC 59.691 55.000 0.00 0.00 43.25 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 3.688086 GGCACGAGGAGAGAGTGT 58.312 61.111 0.00 0.00 38.10 3.55
49 50 1.214062 GGCACGAGGAGAGAGTGTG 59.786 63.158 0.00 0.00 38.10 3.82
50 51 1.214062 GCACGAGGAGAGAGTGTGG 59.786 63.158 0.00 0.00 38.10 4.17
51 52 1.886585 CACGAGGAGAGAGTGTGGG 59.113 63.158 0.00 0.00 0.00 4.61
52 53 1.979693 ACGAGGAGAGAGTGTGGGC 60.980 63.158 0.00 0.00 0.00 5.36
53 54 1.680651 CGAGGAGAGAGTGTGGGCT 60.681 63.158 0.00 0.00 0.00 5.19
54 55 0.394488 CGAGGAGAGAGTGTGGGCTA 60.394 60.000 0.00 0.00 0.00 3.93
55 56 1.398692 GAGGAGAGAGTGTGGGCTAG 58.601 60.000 0.00 0.00 0.00 3.42
56 57 0.032615 AGGAGAGAGTGTGGGCTAGG 60.033 60.000 0.00 0.00 0.00 3.02
57 58 0.033011 GGAGAGAGTGTGGGCTAGGA 60.033 60.000 0.00 0.00 0.00 2.94
58 59 1.398692 GAGAGAGTGTGGGCTAGGAG 58.601 60.000 0.00 0.00 0.00 3.69
59 60 1.003646 AGAGAGTGTGGGCTAGGAGA 58.996 55.000 0.00 0.00 0.00 3.71
60 61 1.064017 AGAGAGTGTGGGCTAGGAGAG 60.064 57.143 0.00 0.00 0.00 3.20
61 62 1.003646 AGAGTGTGGGCTAGGAGAGA 58.996 55.000 0.00 0.00 0.00 3.10
62 63 1.359474 AGAGTGTGGGCTAGGAGAGAA 59.641 52.381 0.00 0.00 0.00 2.87
63 64 1.478916 GAGTGTGGGCTAGGAGAGAAC 59.521 57.143 0.00 0.00 0.00 3.01
64 65 0.537653 GTGTGGGCTAGGAGAGAACC 59.462 60.000 0.00 0.00 0.00 3.62
65 66 0.413832 TGTGGGCTAGGAGAGAACCT 59.586 55.000 0.00 0.00 43.32 3.50
66 67 1.203313 TGTGGGCTAGGAGAGAACCTT 60.203 52.381 0.00 0.00 41.00 3.50
67 68 1.208293 GTGGGCTAGGAGAGAACCTTG 59.792 57.143 0.00 0.00 41.00 3.61
73 74 4.543590 CTAGGAGAGAACCTTGCAGAAA 57.456 45.455 0.00 0.00 41.00 2.52
74 75 3.864789 AGGAGAGAACCTTGCAGAAAA 57.135 42.857 0.00 0.00 36.86 2.29
75 76 3.749226 AGGAGAGAACCTTGCAGAAAAG 58.251 45.455 0.00 0.00 36.86 2.27
86 87 5.044428 CTTGCAGAAAAGGAATCTCAGTG 57.956 43.478 0.00 0.00 0.00 3.66
87 88 4.356405 TGCAGAAAAGGAATCTCAGTGA 57.644 40.909 0.00 0.00 0.00 3.41
88 89 4.914983 TGCAGAAAAGGAATCTCAGTGAT 58.085 39.130 0.00 0.00 36.89 3.06
89 90 4.698780 TGCAGAAAAGGAATCTCAGTGATG 59.301 41.667 0.00 0.00 35.21 3.07
90 91 4.438472 GCAGAAAAGGAATCTCAGTGATGC 60.438 45.833 0.00 0.00 35.21 3.91
91 92 4.698780 CAGAAAAGGAATCTCAGTGATGCA 59.301 41.667 0.00 0.00 35.21 3.96
92 93 5.357314 CAGAAAAGGAATCTCAGTGATGCAT 59.643 40.000 0.00 0.00 35.21 3.96
93 94 5.950549 AGAAAAGGAATCTCAGTGATGCATT 59.049 36.000 0.00 0.00 36.36 3.56
94 95 6.436532 AGAAAAGGAATCTCAGTGATGCATTT 59.563 34.615 0.00 0.00 44.06 2.32
95 96 7.613022 AGAAAAGGAATCTCAGTGATGCATTTA 59.387 33.333 0.00 0.00 42.10 1.40
101 102 6.922247 ATCTCAGTGATGCATTTAAGTGAG 57.078 37.500 23.71 23.71 40.12 3.51
106 107 3.125146 GTGATGCATTTAAGTGAGCGTGA 59.875 43.478 0.00 0.00 0.00 4.35
114 115 0.530650 AAGTGAGCGTGACAGTGGTG 60.531 55.000 0.00 0.00 0.00 4.17
115 116 1.227263 GTGAGCGTGACAGTGGTGT 60.227 57.895 0.00 0.00 40.71 4.16
117 118 1.067416 GAGCGTGACAGTGGTGTGA 59.933 57.895 0.00 0.00 36.88 3.58
119 120 0.106708 AGCGTGACAGTGGTGTGAAT 59.893 50.000 0.00 0.00 36.88 2.57
121 122 1.581934 CGTGACAGTGGTGTGAATGT 58.418 50.000 0.00 0.00 36.88 2.71
135 136 0.815615 GAATGTCCGCAAGCCCCTAG 60.816 60.000 0.00 0.00 0.00 3.02
139 140 1.002624 TCCGCAAGCCCCTAGTTTG 60.003 57.895 0.00 0.00 39.52 2.93
143 144 1.454201 GCAAGCCCCTAGTTTGTCTC 58.546 55.000 0.00 0.00 38.81 3.36
144 145 1.271379 GCAAGCCCCTAGTTTGTCTCA 60.271 52.381 0.00 0.00 38.81 3.27
145 146 2.619074 GCAAGCCCCTAGTTTGTCTCAT 60.619 50.000 0.00 0.00 38.81 2.90
150 151 4.288626 AGCCCCTAGTTTGTCTCATGTTTA 59.711 41.667 0.00 0.00 0.00 2.01
153 154 5.475719 CCCTAGTTTGTCTCATGTTTACGA 58.524 41.667 0.00 0.00 0.00 3.43
157 158 6.085555 AGTTTGTCTCATGTTTACGAGAGA 57.914 37.500 0.00 0.00 38.91 3.10
190 191 4.424566 GCTCGGCGGACGGTTACA 62.425 66.667 7.21 0.00 44.45 2.41
191 192 2.493030 CTCGGCGGACGGTTACAT 59.507 61.111 7.21 0.00 44.45 2.29
192 193 1.876714 CTCGGCGGACGGTTACATG 60.877 63.158 7.21 0.00 44.45 3.21
193 194 3.560278 CGGCGGACGGTTACATGC 61.560 66.667 0.00 0.00 39.42 4.06
194 195 3.199891 GGCGGACGGTTACATGCC 61.200 66.667 0.00 0.00 35.04 4.40
196 197 2.266372 CGGACGGTTACATGCCCA 59.734 61.111 0.00 0.00 0.00 5.36
197 198 1.153249 CGGACGGTTACATGCCCAT 60.153 57.895 0.00 0.00 0.00 4.00
198 199 0.105224 CGGACGGTTACATGCCCATA 59.895 55.000 0.00 0.00 0.00 2.74
199 200 1.270625 CGGACGGTTACATGCCCATAT 60.271 52.381 0.00 0.00 0.00 1.78
201 202 2.552315 GGACGGTTACATGCCCATATTG 59.448 50.000 0.00 0.00 0.00 1.90
203 204 2.173782 ACGGTTACATGCCCATATTGGA 59.826 45.455 0.00 0.00 40.96 3.53
215 223 4.272489 CCCATATTGGATGACACAACACT 58.728 43.478 0.00 0.00 40.96 3.55
217 225 5.185635 CCCATATTGGATGACACAACACTTT 59.814 40.000 0.00 0.00 40.96 2.66
218 226 6.094719 CCATATTGGATGACACAACACTTTG 58.905 40.000 0.00 0.00 40.96 2.77
219 227 6.072008 CCATATTGGATGACACAACACTTTGA 60.072 38.462 0.00 0.00 40.96 2.69
220 228 4.898829 TTGGATGACACAACACTTTGAG 57.101 40.909 0.00 0.00 36.48 3.02
243 251 1.924335 CACGGTCCGAACATATGCG 59.076 57.895 20.51 0.00 0.00 4.73
258 266 1.616159 ATGCGGGCTGTTTAAGTGTT 58.384 45.000 0.00 0.00 0.00 3.32
272 280 3.297134 AAGTGTTGGTGTTGGAGATGT 57.703 42.857 0.00 0.00 0.00 3.06
279 287 4.974645 TGGTGTTGGAGATGTCTTTACT 57.025 40.909 0.00 0.00 0.00 2.24
287 295 5.026121 TGGAGATGTCTTTACTGGTGATCT 58.974 41.667 0.00 0.00 0.00 2.75
306 314 2.851194 TCTGCTGGGTACTACTACCTCT 59.149 50.000 0.00 0.00 42.22 3.69
311 319 5.139001 GCTGGGTACTACTACCTCTGTATT 58.861 45.833 0.00 0.00 42.22 1.89
312 320 6.126390 TGCTGGGTACTACTACCTCTGTATTA 60.126 42.308 0.00 0.00 42.22 0.98
313 321 6.774656 GCTGGGTACTACTACCTCTGTATTAA 59.225 42.308 0.00 0.00 42.22 1.40
365 373 8.114905 GCTAAAACTAGCCTTAGAAAACGTATG 58.885 37.037 13.20 0.00 37.11 2.39
382 390 4.202223 ACGTATGCGAAGGGAGTATGAAAT 60.202 41.667 11.07 0.00 42.00 2.17
383 391 5.010314 ACGTATGCGAAGGGAGTATGAAATA 59.990 40.000 11.07 0.00 42.00 1.40
384 392 5.345202 CGTATGCGAAGGGAGTATGAAATAC 59.655 44.000 0.00 0.00 44.85 1.89
409 417 3.731264 CGATGTACAAGGACTCGGAGTTC 60.731 52.174 12.67 10.54 0.00 3.01
432 440 2.092211 GTGTCTAACACGAATTCTGCCG 59.908 50.000 3.52 0.00 39.53 5.69
438 446 1.148310 CACGAATTCTGCCGTTGAGT 58.852 50.000 3.52 0.00 36.83 3.41
455 463 0.610232 AGTGGGACCAAAGAGCATGC 60.610 55.000 10.51 10.51 0.00 4.06
456 464 0.895100 GTGGGACCAAAGAGCATGCA 60.895 55.000 21.98 0.00 0.00 3.96
457 465 0.040058 TGGGACCAAAGAGCATGCAT 59.960 50.000 21.98 4.82 0.00 3.96
458 466 0.458669 GGGACCAAAGAGCATGCATG 59.541 55.000 22.70 22.70 0.00 4.06
459 467 1.180029 GGACCAAAGAGCATGCATGT 58.820 50.000 26.79 14.24 0.00 3.21
460 468 2.368439 GGACCAAAGAGCATGCATGTA 58.632 47.619 26.79 0.00 0.00 2.29
461 469 2.098117 GGACCAAAGAGCATGCATGTAC 59.902 50.000 26.79 19.81 0.00 2.90
462 470 2.094675 ACCAAAGAGCATGCATGTACC 58.905 47.619 26.79 15.89 0.00 3.34
463 471 1.406539 CCAAAGAGCATGCATGTACCC 59.593 52.381 26.79 10.97 0.00 3.69
464 472 1.406539 CAAAGAGCATGCATGTACCCC 59.593 52.381 26.79 10.60 0.00 4.95
465 473 0.921896 AAGAGCATGCATGTACCCCT 59.078 50.000 26.79 15.24 0.00 4.79
466 474 1.806496 AGAGCATGCATGTACCCCTA 58.194 50.000 26.79 0.00 0.00 3.53
467 475 1.417890 AGAGCATGCATGTACCCCTAC 59.582 52.381 26.79 8.43 0.00 3.18
512 528 1.144503 GCCCATCCCAATCAGTGATCT 59.855 52.381 5.98 0.00 0.00 2.75
513 529 2.813354 GCCCATCCCAATCAGTGATCTC 60.813 54.545 5.98 0.00 0.00 2.75
514 530 2.224719 CCCATCCCAATCAGTGATCTCC 60.225 54.545 5.98 0.00 0.00 3.71
515 531 2.709934 CCATCCCAATCAGTGATCTCCT 59.290 50.000 5.98 0.00 0.00 3.69
516 532 3.906218 CCATCCCAATCAGTGATCTCCTA 59.094 47.826 5.98 0.00 0.00 2.94
519 535 5.403558 TCCCAATCAGTGATCTCCTACTA 57.596 43.478 5.98 0.00 0.00 1.82
521 537 5.103473 TCCCAATCAGTGATCTCCTACTACT 60.103 44.000 5.98 0.00 0.00 2.57
526 542 5.369833 TCAGTGATCTCCTACTACTAGCAC 58.630 45.833 0.00 0.00 0.00 4.40
533 553 3.618351 TCCTACTACTAGCACTGACACC 58.382 50.000 0.00 0.00 0.00 4.16
546 566 3.493830 GACACCGCACCGACACTCA 62.494 63.158 0.00 0.00 0.00 3.41
606 628 6.967767 CGTGTCTCGAGAATTAACAGATTACT 59.032 38.462 18.55 0.00 42.86 2.24
731 766 1.291877 CCCTGAAAAGTCGTGCTCGG 61.292 60.000 8.49 0.00 37.69 4.63
732 767 0.600255 CCTGAAAAGTCGTGCTCGGT 60.600 55.000 8.49 0.00 37.69 4.69
733 768 1.336517 CCTGAAAAGTCGTGCTCGGTA 60.337 52.381 8.49 0.00 37.69 4.02
806 846 7.418025 CCCAAACAAAACACTACTATTCCCAAA 60.418 37.037 0.00 0.00 0.00 3.28
820 871 1.614903 TCCCAAACAAATGAGCAGCTG 59.385 47.619 10.11 10.11 0.00 4.24
821 872 1.425412 CCAAACAAATGAGCAGCTGC 58.575 50.000 31.53 31.53 42.49 5.25
854 905 3.071206 GCTCTGCTCCTCCGTCCA 61.071 66.667 0.00 0.00 0.00 4.02
857 908 1.662438 CTCTGCTCCTCCGTCCACTC 61.662 65.000 0.00 0.00 0.00 3.51
1284 1335 0.955428 TTTGACCGCTCTCATGGTGC 60.955 55.000 0.00 0.00 38.99 5.01
1473 1538 6.627087 AGAAAGATTAGTGAGTGGATTGGA 57.373 37.500 0.00 0.00 0.00 3.53
1477 1542 3.350219 TTAGTGAGTGGATTGGAAGCC 57.650 47.619 0.00 0.00 34.32 4.35
1478 1543 0.036010 AGTGAGTGGATTGGAAGCCG 60.036 55.000 0.00 0.00 37.25 5.52
1479 1544 1.377202 TGAGTGGATTGGAAGCCGC 60.377 57.895 0.00 0.00 44.93 6.53
1537 1602 1.543802 CTTGGCATTTCTTTACCGGCA 59.456 47.619 0.00 0.00 0.00 5.69
1588 1661 4.942483 AGATTCAGCCTCAAATCAGACAAG 59.058 41.667 0.00 0.00 34.91 3.16
1589 1662 3.063510 TCAGCCTCAAATCAGACAAGG 57.936 47.619 0.00 0.00 0.00 3.61
1590 1663 2.639347 TCAGCCTCAAATCAGACAAGGA 59.361 45.455 0.00 0.00 0.00 3.36
1591 1664 3.008330 CAGCCTCAAATCAGACAAGGAG 58.992 50.000 0.00 0.00 0.00 3.69
1592 1665 2.909006 AGCCTCAAATCAGACAAGGAGA 59.091 45.455 0.00 0.00 0.00 3.71
1593 1666 3.055240 AGCCTCAAATCAGACAAGGAGAG 60.055 47.826 0.00 0.00 0.00 3.20
1594 1667 3.871485 CCTCAAATCAGACAAGGAGAGG 58.129 50.000 0.00 0.00 35.90 3.69
1595 1668 3.517100 CCTCAAATCAGACAAGGAGAGGA 59.483 47.826 0.00 0.00 43.07 3.71
1596 1669 4.382901 CCTCAAATCAGACAAGGAGAGGAG 60.383 50.000 0.00 0.00 43.07 3.69
1597 1670 4.420206 TCAAATCAGACAAGGAGAGGAGA 58.580 43.478 0.00 0.00 0.00 3.71
1598 1671 4.465660 TCAAATCAGACAAGGAGAGGAGAG 59.534 45.833 0.00 0.00 0.00 3.20
1599 1672 2.523325 TCAGACAAGGAGAGGAGAGG 57.477 55.000 0.00 0.00 0.00 3.69
1600 1673 1.996291 TCAGACAAGGAGAGGAGAGGA 59.004 52.381 0.00 0.00 0.00 3.71
1601 1674 2.025416 TCAGACAAGGAGAGGAGAGGAG 60.025 54.545 0.00 0.00 0.00 3.69
1602 1675 2.025416 CAGACAAGGAGAGGAGAGGAGA 60.025 54.545 0.00 0.00 0.00 3.71
1603 1676 2.242196 AGACAAGGAGAGGAGAGGAGAG 59.758 54.545 0.00 0.00 0.00 3.20
1604 1677 1.287739 ACAAGGAGAGGAGAGGAGAGG 59.712 57.143 0.00 0.00 0.00 3.69
1605 1678 1.568597 CAAGGAGAGGAGAGGAGAGGA 59.431 57.143 0.00 0.00 0.00 3.71
1606 1679 1.522900 AGGAGAGGAGAGGAGAGGAG 58.477 60.000 0.00 0.00 0.00 3.69
1607 1680 1.010793 AGGAGAGGAGAGGAGAGGAGA 59.989 57.143 0.00 0.00 0.00 3.71
1608 1681 1.850345 GGAGAGGAGAGGAGAGGAGAA 59.150 57.143 0.00 0.00 0.00 2.87
1609 1682 2.158608 GGAGAGGAGAGGAGAGGAGAAG 60.159 59.091 0.00 0.00 0.00 2.85
1634 1707 1.947456 GGAACCATCCACGGATTTAGC 59.053 52.381 0.00 0.00 45.79 3.09
1635 1708 2.639065 GAACCATCCACGGATTTAGCA 58.361 47.619 0.00 0.00 31.62 3.49
1636 1709 2.332063 ACCATCCACGGATTTAGCAG 57.668 50.000 0.00 0.00 31.62 4.24
1637 1710 0.947244 CCATCCACGGATTTAGCAGC 59.053 55.000 0.00 0.00 31.62 5.25
1638 1711 1.667236 CATCCACGGATTTAGCAGCA 58.333 50.000 0.00 0.00 31.62 4.41
1639 1712 1.600957 CATCCACGGATTTAGCAGCAG 59.399 52.381 0.00 0.00 31.62 4.24
1660 1758 2.546162 GCTCGTCCTAAACTATCCCTGC 60.546 54.545 0.00 0.00 0.00 4.85
1683 1781 7.816640 TGCTATACACTGAAGATTTTTGTTCC 58.183 34.615 0.00 0.00 0.00 3.62
1702 1800 6.001460 TGTTCCAAATAATTCGGTGAAGAGT 58.999 36.000 0.00 0.00 0.00 3.24
1708 1806 2.169832 ATTCGGTGAAGAGTGTGGTG 57.830 50.000 0.00 0.00 0.00 4.17
1711 1809 1.148273 GGTGAAGAGTGTGGTGGCA 59.852 57.895 0.00 0.00 0.00 4.92
1723 1821 0.543277 TGGTGGCATCAGATCTCACC 59.457 55.000 19.04 19.04 45.75 4.02
1818 1916 1.596934 CAAGACCGAGCAGGCCTTA 59.403 57.895 0.00 0.00 41.00 2.69
2226 2345 2.165641 CAGCTACAAGTCGTGGTGGATA 59.834 50.000 0.00 0.00 0.00 2.59
2370 2489 3.483869 GATCCCTCCAAGGCGCCT 61.484 66.667 27.08 27.08 32.73 5.52
3014 3133 3.669354 GGGACGATTAGACCAGCAG 57.331 57.895 0.00 0.00 36.37 4.24
3021 3141 2.541762 CGATTAGACCAGCAGCTTTAGC 59.458 50.000 0.00 0.00 42.49 3.09
3042 3162 2.104132 CCGTCGTCGCCATCATCA 59.896 61.111 0.00 0.00 35.54 3.07
3082 3202 4.420206 TGCTGGTAGCCTAGTATCATCAT 58.580 43.478 0.00 0.00 41.51 2.45
3083 3203 4.464244 TGCTGGTAGCCTAGTATCATCATC 59.536 45.833 0.00 0.00 41.51 2.92
3084 3204 4.464244 GCTGGTAGCCTAGTATCATCATCA 59.536 45.833 0.00 0.00 34.48 3.07
3132 3252 7.578955 GCAGAGGACAAGTGTCTATAACCTTTA 60.579 40.741 11.07 0.00 44.20 1.85
3158 3278 2.879813 TTTCGCCTAATCCGTGGGCC 62.880 60.000 0.00 0.00 42.58 5.80
3232 3356 3.947279 CGTGTTAACAGGATGCACG 57.053 52.632 20.93 9.88 44.88 5.34
3257 3388 0.466189 AGCACAAACCAGACCCACTG 60.466 55.000 0.00 0.00 45.36 3.66
3259 3390 1.476110 GCACAAACCAGACCCACTGTA 60.476 52.381 0.00 0.00 44.40 2.74
3260 3391 2.814097 GCACAAACCAGACCCACTGTAT 60.814 50.000 0.00 0.00 44.40 2.29
3261 3392 3.074412 CACAAACCAGACCCACTGTATC 58.926 50.000 0.00 0.00 44.40 2.24
3263 3394 2.305927 CAAACCAGACCCACTGTATCCT 59.694 50.000 0.00 0.00 44.40 3.24
3264 3395 1.867363 ACCAGACCCACTGTATCCTC 58.133 55.000 0.00 0.00 44.40 3.71
3265 3396 1.362932 ACCAGACCCACTGTATCCTCT 59.637 52.381 0.00 0.00 44.40 3.69
3274 3405 4.466370 CCCACTGTATCCTCTTCTGTTACA 59.534 45.833 0.00 0.00 0.00 2.41
3286 3417 4.479619 CTTCTGTTACAAGAAGCAATGCC 58.520 43.478 0.00 0.00 44.88 4.40
3353 3485 5.010112 ACAATGCTCAGCGATGTACTATACT 59.990 40.000 5.38 0.00 30.42 2.12
3414 3557 5.863935 ACAAAGCTGAAGTTCAAGAAACAAC 59.136 36.000 7.06 0.00 40.56 3.32
3418 3561 5.885912 AGCTGAAGTTCAAGAAACAACCTTA 59.114 36.000 7.06 0.00 40.56 2.69
3465 3614 3.067742 ACCTCATATAACCGGACAACTCG 59.932 47.826 9.46 0.00 0.00 4.18
3473 3622 3.891056 ACCGGACAACTCGAATTTTTC 57.109 42.857 9.46 0.00 0.00 2.29
3491 3640 6.654793 TTTTTCAAACCGGACAAAAATCAG 57.345 33.333 9.46 0.00 0.00 2.90
3513 3662 2.092429 TCTTGGCTCCAGTCAAACAACT 60.092 45.455 0.00 0.00 39.36 3.16
3534 3683 4.956075 ACTGGTTTCATCCTTGTTTTGAGT 59.044 37.500 0.00 0.00 0.00 3.41
3535 3684 5.067805 ACTGGTTTCATCCTTGTTTTGAGTC 59.932 40.000 0.00 0.00 0.00 3.36
3536 3685 4.952957 TGGTTTCATCCTTGTTTTGAGTCA 59.047 37.500 0.00 0.00 0.00 3.41
3537 3686 5.598005 TGGTTTCATCCTTGTTTTGAGTCAT 59.402 36.000 0.00 0.00 0.00 3.06
3538 3687 6.098124 TGGTTTCATCCTTGTTTTGAGTCATT 59.902 34.615 0.00 0.00 0.00 2.57
3539 3688 6.986231 GGTTTCATCCTTGTTTTGAGTCATTT 59.014 34.615 0.00 0.00 0.00 2.32
3540 3689 7.495606 GGTTTCATCCTTGTTTTGAGTCATTTT 59.504 33.333 0.00 0.00 0.00 1.82
3541 3690 8.330302 GTTTCATCCTTGTTTTGAGTCATTTTG 58.670 33.333 0.00 0.00 0.00 2.44
3542 3691 7.345422 TCATCCTTGTTTTGAGTCATTTTGA 57.655 32.000 0.00 0.00 0.00 2.69
3543 3692 7.954835 TCATCCTTGTTTTGAGTCATTTTGAT 58.045 30.769 0.00 0.00 0.00 2.57
3544 3693 8.084073 TCATCCTTGTTTTGAGTCATTTTGATC 58.916 33.333 0.00 0.00 0.00 2.92
3545 3694 7.345422 TCCTTGTTTTGAGTCATTTTGATCA 57.655 32.000 0.00 0.00 0.00 2.92
3546 3695 7.428020 TCCTTGTTTTGAGTCATTTTGATCAG 58.572 34.615 0.00 0.00 0.00 2.90
3547 3696 7.068593 TCCTTGTTTTGAGTCATTTTGATCAGT 59.931 33.333 0.00 0.00 0.00 3.41
3548 3697 7.380602 CCTTGTTTTGAGTCATTTTGATCAGTC 59.619 37.037 0.00 0.00 0.00 3.51
3549 3698 7.332213 TGTTTTGAGTCATTTTGATCAGTCA 57.668 32.000 0.00 0.00 0.00 3.41
3550 3699 7.770201 TGTTTTGAGTCATTTTGATCAGTCAA 58.230 30.769 0.00 0.00 42.41 3.18
3571 3720 5.503689 AAAAACCGTTTTGAGTCGTTTTG 57.496 34.783 9.98 0.00 35.58 2.44
3572 3721 4.422546 AAACCGTTTTGAGTCGTTTTGA 57.577 36.364 0.00 0.00 0.00 2.69
3579 3728 2.804697 TGAGTCGTTTTGATCGGTCA 57.195 45.000 0.00 0.00 0.00 4.02
3612 3761 2.606308 GGCATCACAGTTGAAAGTGCAG 60.606 50.000 0.00 0.00 37.11 4.41
3650 3799 5.654603 ATTTAGGTGTGACGACAGTATGA 57.345 39.130 0.00 0.00 39.69 2.15
3679 3828 8.700994 GTGAAACTAATATCGATTGCTAAAGC 57.299 34.615 1.71 0.00 42.50 3.51
3728 3881 4.647564 ATCTTGTTGATGACTGACCCTT 57.352 40.909 0.00 0.00 33.43 3.95
3732 3885 2.303022 TGTTGATGACTGACCCTTCCTC 59.697 50.000 0.00 0.00 0.00 3.71
3789 3942 2.552743 GCTAGAAGGCTTTCGTTTTGGT 59.447 45.455 0.00 0.00 38.38 3.67
3791 3944 3.710326 AGAAGGCTTTCGTTTTGGTTC 57.290 42.857 0.00 0.00 38.38 3.62
3801 3954 4.461992 TCGTTTTGGTTCGATTTGAGTC 57.538 40.909 0.00 0.00 0.00 3.36
3804 3957 4.594136 GTTTTGGTTCGATTTGAGTCGTT 58.406 39.130 0.00 0.00 42.07 3.85
3812 3965 4.124238 TCGATTTGAGTCGTTGGAAAACT 58.876 39.130 0.00 0.00 42.07 2.66
3837 3990 5.189659 ACTATTAAGAGGACTCATCGTGC 57.810 43.478 1.59 0.00 0.00 5.34
3839 3992 4.679373 ATTAAGAGGACTCATCGTGCAT 57.321 40.909 1.75 0.00 36.26 3.96
3844 3997 3.118482 AGAGGACTCATCGTGCATGAATT 60.118 43.478 13.65 0.00 41.25 2.17
3845 3998 3.614092 AGGACTCATCGTGCATGAATTT 58.386 40.909 13.65 0.00 41.25 1.82
3846 3999 3.624861 AGGACTCATCGTGCATGAATTTC 59.375 43.478 13.65 7.12 41.25 2.17
3847 4000 3.544834 GGACTCATCGTGCATGAATTTCG 60.545 47.826 13.65 0.00 41.25 3.46
3848 4001 3.002791 ACTCATCGTGCATGAATTTCGT 58.997 40.909 13.65 3.54 41.25 3.85
3849 4002 3.181517 ACTCATCGTGCATGAATTTCGTG 60.182 43.478 13.65 13.24 41.25 4.35
3850 4003 2.741517 TCATCGTGCATGAATTTCGTGT 59.258 40.909 13.65 0.00 38.68 4.49
3851 4004 2.592796 TCGTGCATGAATTTCGTGTG 57.407 45.000 17.60 9.76 35.86 3.82
3852 4005 1.196581 TCGTGCATGAATTTCGTGTGG 59.803 47.619 17.60 9.03 35.86 4.17
3853 4006 1.196581 CGTGCATGAATTTCGTGTGGA 59.803 47.619 17.60 4.00 35.86 4.02
3854 4007 2.725759 CGTGCATGAATTTCGTGTGGAG 60.726 50.000 17.60 6.01 35.86 3.86
3855 4008 2.483877 GTGCATGAATTTCGTGTGGAGA 59.516 45.455 17.60 0.00 35.86 3.71
3856 4009 3.127548 GTGCATGAATTTCGTGTGGAGAT 59.872 43.478 17.60 0.00 35.86 2.75
3857 4010 4.332543 GTGCATGAATTTCGTGTGGAGATA 59.667 41.667 17.60 0.00 35.86 1.98
3868 4021 7.504924 TTCGTGTGGAGATAATTCAAAACTT 57.495 32.000 0.00 0.00 0.00 2.66
3869 4022 8.610248 TTCGTGTGGAGATAATTCAAAACTTA 57.390 30.769 0.00 0.00 0.00 2.24
3870 4023 8.786826 TCGTGTGGAGATAATTCAAAACTTAT 57.213 30.769 0.00 0.00 0.00 1.73
3871 4024 9.878667 TCGTGTGGAGATAATTCAAAACTTATA 57.121 29.630 0.00 0.00 0.00 0.98
3876 4029 9.983024 TGGAGATAATTCAAAACTTATAACCCA 57.017 29.630 0.00 0.00 0.00 4.51
3892 4045 4.362470 AACCCAACTTTCCTACACCTAC 57.638 45.455 0.00 0.00 0.00 3.18
3893 4046 3.595021 ACCCAACTTTCCTACACCTACT 58.405 45.455 0.00 0.00 0.00 2.57
3895 4048 5.347978 ACCCAACTTTCCTACACCTACTAT 58.652 41.667 0.00 0.00 0.00 2.12
3910 4063 8.959705 ACACCTACTATTAAATTACCTTGAGC 57.040 34.615 0.00 0.00 0.00 4.26
3926 4079 4.238385 GCAGTGTGCTCGTACGAA 57.762 55.556 20.00 1.93 40.96 3.85
3927 4080 2.062779 GCAGTGTGCTCGTACGAAG 58.937 57.895 20.00 13.93 40.96 3.79
3928 4081 1.344942 GCAGTGTGCTCGTACGAAGG 61.345 60.000 20.00 9.79 40.96 3.46
3929 4082 0.039437 CAGTGTGCTCGTACGAAGGT 60.039 55.000 20.00 0.00 0.00 3.50
3930 4083 1.198408 CAGTGTGCTCGTACGAAGGTA 59.802 52.381 20.00 5.28 0.00 3.08
3931 4084 2.089980 AGTGTGCTCGTACGAAGGTAT 58.910 47.619 20.00 1.15 0.00 2.73
3932 4085 2.097142 AGTGTGCTCGTACGAAGGTATC 59.903 50.000 20.00 8.40 0.00 2.24
3933 4086 1.402968 TGTGCTCGTACGAAGGTATCC 59.597 52.381 20.00 3.93 0.00 2.59
3934 4087 1.674962 GTGCTCGTACGAAGGTATCCT 59.325 52.381 20.00 0.00 33.87 3.24
3936 4089 2.098607 TGCTCGTACGAAGGTATCCTTG 59.901 50.000 20.00 4.48 44.82 3.61
3937 4090 2.357009 GCTCGTACGAAGGTATCCTTGA 59.643 50.000 20.00 0.00 44.82 3.02
3938 4091 3.548415 GCTCGTACGAAGGTATCCTTGAG 60.548 52.174 20.00 3.74 44.82 3.02
3939 4092 3.614092 TCGTACGAAGGTATCCTTGAGT 58.386 45.455 17.11 8.23 44.82 3.41
3940 4093 4.012374 TCGTACGAAGGTATCCTTGAGTT 58.988 43.478 17.11 0.00 44.82 3.01
3941 4094 5.185454 TCGTACGAAGGTATCCTTGAGTTA 58.815 41.667 17.11 0.00 44.82 2.24
3942 4095 5.065218 TCGTACGAAGGTATCCTTGAGTTAC 59.935 44.000 17.11 1.94 44.82 2.50
3943 4096 5.163723 CGTACGAAGGTATCCTTGAGTTACA 60.164 44.000 10.44 0.00 44.82 2.41
3944 4097 5.733620 ACGAAGGTATCCTTGAGTTACAA 57.266 39.130 5.73 0.00 44.82 2.41
3945 4098 5.476614 ACGAAGGTATCCTTGAGTTACAAC 58.523 41.667 5.73 0.00 44.82 3.32
3946 4099 5.011329 ACGAAGGTATCCTTGAGTTACAACA 59.989 40.000 5.73 0.00 44.82 3.33
3947 4100 5.577164 CGAAGGTATCCTTGAGTTACAACAG 59.423 44.000 5.73 0.00 44.82 3.16
3948 4101 5.422214 AGGTATCCTTGAGTTACAACAGG 57.578 43.478 0.00 0.00 34.56 4.00
3949 4102 5.091552 AGGTATCCTTGAGTTACAACAGGA 58.908 41.667 3.04 3.04 37.28 3.86
3950 4103 5.546499 AGGTATCCTTGAGTTACAACAGGAA 59.454 40.000 4.35 0.00 36.74 3.36
3951 4104 6.043938 AGGTATCCTTGAGTTACAACAGGAAA 59.956 38.462 4.35 0.00 36.74 3.13
3952 4105 6.884836 GGTATCCTTGAGTTACAACAGGAAAT 59.115 38.462 4.35 0.00 36.74 2.17
3953 4106 7.393515 GGTATCCTTGAGTTACAACAGGAAATT 59.606 37.037 4.35 0.00 36.74 1.82
3954 4107 9.444600 GTATCCTTGAGTTACAACAGGAAATTA 57.555 33.333 4.35 0.00 36.74 1.40
3955 4108 7.739498 TCCTTGAGTTACAACAGGAAATTAC 57.261 36.000 0.00 0.00 32.38 1.89
3956 4109 7.284074 TCCTTGAGTTACAACAGGAAATTACA 58.716 34.615 0.00 0.00 32.38 2.41
3957 4110 7.444183 TCCTTGAGTTACAACAGGAAATTACAG 59.556 37.037 0.00 0.00 32.38 2.74
3958 4111 7.308589 CCTTGAGTTACAACAGGAAATTACAGG 60.309 40.741 0.00 0.00 34.56 4.00
3959 4112 6.833041 TGAGTTACAACAGGAAATTACAGGA 58.167 36.000 0.00 0.00 0.00 3.86
3960 4113 7.458397 TGAGTTACAACAGGAAATTACAGGAT 58.542 34.615 0.00 0.00 0.00 3.24
3961 4114 8.598916 TGAGTTACAACAGGAAATTACAGGATA 58.401 33.333 0.00 0.00 0.00 2.59
3962 4115 8.788325 AGTTACAACAGGAAATTACAGGATAC 57.212 34.615 0.00 0.00 0.00 2.24
3963 4116 7.827729 AGTTACAACAGGAAATTACAGGATACC 59.172 37.037 0.00 0.00 37.17 2.73
3964 4117 5.506708 ACAACAGGAAATTACAGGATACCC 58.493 41.667 0.00 0.00 37.17 3.69
3965 4118 4.790718 ACAGGAAATTACAGGATACCCC 57.209 45.455 0.00 0.00 37.17 4.95
3966 4119 3.135895 ACAGGAAATTACAGGATACCCCG 59.864 47.826 0.00 0.00 40.87 5.73
3967 4120 3.135895 CAGGAAATTACAGGATACCCCGT 59.864 47.826 0.00 0.00 40.87 5.28
3968 4121 3.135895 AGGAAATTACAGGATACCCCGTG 59.864 47.826 0.00 0.00 40.87 4.94
3969 4122 2.632987 AATTACAGGATACCCCGTGC 57.367 50.000 0.00 0.00 40.87 5.34
3970 4123 0.391597 ATTACAGGATACCCCGTGCG 59.608 55.000 0.00 0.00 40.87 5.34
3971 4124 2.300850 TTACAGGATACCCCGTGCGC 62.301 60.000 0.00 0.00 40.87 6.09
3972 4125 4.155733 CAGGATACCCCGTGCGCA 62.156 66.667 5.66 5.66 40.87 6.09
3973 4126 4.157120 AGGATACCCCGTGCGCAC 62.157 66.667 30.42 30.42 40.87 5.34
3983 4136 2.183300 GTGCGCACGGGATAGTCA 59.817 61.111 26.77 0.00 0.00 3.41
3984 4137 1.878522 GTGCGCACGGGATAGTCAG 60.879 63.158 26.77 0.00 0.00 3.51
3985 4138 2.348104 TGCGCACGGGATAGTCAGT 61.348 57.895 5.66 0.00 0.00 3.41
3986 4139 1.033202 TGCGCACGGGATAGTCAGTA 61.033 55.000 5.66 0.00 0.00 2.74
3987 4140 0.317938 GCGCACGGGATAGTCAGTAG 60.318 60.000 0.30 0.00 0.00 2.57
3988 4141 0.317938 CGCACGGGATAGTCAGTAGC 60.318 60.000 0.00 0.00 0.00 3.58
3989 4142 1.033574 GCACGGGATAGTCAGTAGCT 58.966 55.000 0.00 0.00 0.00 3.32
3990 4143 1.001158 GCACGGGATAGTCAGTAGCTC 60.001 57.143 0.00 0.00 0.00 4.09
3991 4144 2.577700 CACGGGATAGTCAGTAGCTCT 58.422 52.381 0.00 0.00 0.00 4.09
3992 4145 2.550606 CACGGGATAGTCAGTAGCTCTC 59.449 54.545 0.00 0.00 0.00 3.20
3993 4146 2.440253 ACGGGATAGTCAGTAGCTCTCT 59.560 50.000 0.00 0.00 0.00 3.10
3994 4147 2.811431 CGGGATAGTCAGTAGCTCTCTG 59.189 54.545 11.23 11.23 0.00 3.35
3995 4148 3.153919 GGGATAGTCAGTAGCTCTCTGG 58.846 54.545 15.65 2.15 34.15 3.86
3996 4149 3.181438 GGGATAGTCAGTAGCTCTCTGGA 60.181 52.174 15.65 5.64 34.15 3.86
3997 4150 3.818773 GGATAGTCAGTAGCTCTCTGGAC 59.181 52.174 15.65 12.70 34.15 4.02
3998 4151 2.889170 AGTCAGTAGCTCTCTGGACA 57.111 50.000 15.65 0.00 34.15 4.02
3999 4152 2.442413 AGTCAGTAGCTCTCTGGACAC 58.558 52.381 15.65 8.99 34.15 3.67
4000 4153 1.474879 GTCAGTAGCTCTCTGGACACC 59.525 57.143 15.65 0.00 34.15 4.16
4001 4154 0.820871 CAGTAGCTCTCTGGACACCC 59.179 60.000 10.00 0.00 0.00 4.61
4002 4155 0.409876 AGTAGCTCTCTGGACACCCA 59.590 55.000 0.00 0.00 40.95 4.51
4003 4156 0.533032 GTAGCTCTCTGGACACCCAC 59.467 60.000 0.00 0.00 37.58 4.61
4004 4157 0.409876 TAGCTCTCTGGACACCCACT 59.590 55.000 0.00 0.00 37.58 4.00
4005 4158 1.190833 AGCTCTCTGGACACCCACTG 61.191 60.000 0.00 0.00 37.58 3.66
4006 4159 1.476007 GCTCTCTGGACACCCACTGT 61.476 60.000 0.00 0.00 37.58 3.55
4014 4167 4.988065 CACCCACTGTGTACGAGG 57.012 61.111 7.08 2.86 40.26 4.63
4015 4168 2.347630 CACCCACTGTGTACGAGGA 58.652 57.895 7.08 0.00 40.26 3.71
4016 4169 0.038526 CACCCACTGTGTACGAGGAC 60.039 60.000 7.08 0.00 40.26 3.85
4017 4170 0.178970 ACCCACTGTGTACGAGGACT 60.179 55.000 7.08 0.00 0.00 3.85
4018 4171 0.966920 CCCACTGTGTACGAGGACTT 59.033 55.000 7.08 0.00 0.00 3.01
4019 4172 1.343465 CCCACTGTGTACGAGGACTTT 59.657 52.381 7.08 0.00 0.00 2.66
4020 4173 2.404215 CCACTGTGTACGAGGACTTTG 58.596 52.381 7.08 0.00 0.00 2.77
4021 4174 2.035449 CCACTGTGTACGAGGACTTTGA 59.965 50.000 7.08 0.00 0.00 2.69
4022 4175 3.050619 CACTGTGTACGAGGACTTTGAC 58.949 50.000 0.00 0.00 0.00 3.18
4023 4176 2.035576 ACTGTGTACGAGGACTTTGACC 59.964 50.000 0.00 0.00 0.00 4.02
4024 4177 1.342174 TGTGTACGAGGACTTTGACCC 59.658 52.381 0.00 0.00 0.00 4.46
4025 4178 0.599558 TGTACGAGGACTTTGACCCG 59.400 55.000 0.00 0.00 0.00 5.28
4026 4179 0.600057 GTACGAGGACTTTGACCCGT 59.400 55.000 0.00 0.00 37.75 5.28
4027 4180 0.599558 TACGAGGACTTTGACCCGTG 59.400 55.000 0.00 0.00 36.40 4.94
4028 4181 1.366366 CGAGGACTTTGACCCGTGT 59.634 57.895 0.00 0.00 0.00 4.49
4029 4182 0.944311 CGAGGACTTTGACCCGTGTG 60.944 60.000 0.00 0.00 0.00 3.82
4030 4183 1.227853 AGGACTTTGACCCGTGTGC 60.228 57.895 0.00 0.00 0.00 4.57
4031 4184 1.525077 GGACTTTGACCCGTGTGCA 60.525 57.895 0.00 0.00 0.00 4.57
4032 4185 1.647084 GACTTTGACCCGTGTGCAC 59.353 57.895 10.75 10.75 0.00 4.57
4044 4197 4.973055 GTGCACGGGTGGCGTGTA 62.973 66.667 0.00 0.00 39.31 2.90
4045 4198 4.237207 TGCACGGGTGGCGTGTAA 62.237 61.111 0.00 0.00 39.31 2.41
4046 4199 3.719144 GCACGGGTGGCGTGTAAC 61.719 66.667 0.00 0.00 39.31 2.50
4047 4200 2.029964 CACGGGTGGCGTGTAACT 59.970 61.111 0.00 0.00 33.22 2.24
4048 4201 2.025418 CACGGGTGGCGTGTAACTC 61.025 63.158 0.00 0.00 33.22 3.01
4049 4202 2.205152 ACGGGTGGCGTGTAACTCT 61.205 57.895 0.00 0.00 31.75 3.24
4050 4203 1.445582 CGGGTGGCGTGTAACTCTC 60.446 63.158 0.00 0.00 31.75 3.20
4051 4204 1.874345 CGGGTGGCGTGTAACTCTCT 61.874 60.000 0.00 0.00 31.75 3.10
4052 4205 1.180029 GGGTGGCGTGTAACTCTCTA 58.820 55.000 0.00 0.00 31.75 2.43
4053 4206 1.134560 GGGTGGCGTGTAACTCTCTAG 59.865 57.143 0.00 0.00 31.75 2.43
4054 4207 2.089980 GGTGGCGTGTAACTCTCTAGA 58.910 52.381 0.00 0.00 31.75 2.43
4055 4208 2.688958 GGTGGCGTGTAACTCTCTAGAT 59.311 50.000 0.00 0.00 31.75 1.98
4056 4209 3.881688 GGTGGCGTGTAACTCTCTAGATA 59.118 47.826 0.00 0.00 31.75 1.98
4057 4210 4.261114 GGTGGCGTGTAACTCTCTAGATAC 60.261 50.000 0.00 0.00 32.94 2.24
4058 4211 3.881688 TGGCGTGTAACTCTCTAGATACC 59.118 47.826 0.00 0.00 31.67 2.73
4059 4212 3.252944 GGCGTGTAACTCTCTAGATACCC 59.747 52.174 0.00 0.00 31.67 3.69
4060 4213 3.252944 GCGTGTAACTCTCTAGATACCCC 59.747 52.174 0.00 0.00 31.67 4.95
4061 4214 3.497640 CGTGTAACTCTCTAGATACCCCG 59.502 52.174 0.00 0.00 31.67 5.73
4062 4215 4.459330 GTGTAACTCTCTAGATACCCCGT 58.541 47.826 0.00 0.00 31.67 5.28
4063 4216 4.275443 GTGTAACTCTCTAGATACCCCGTG 59.725 50.000 0.00 0.00 31.67 4.94
4064 4217 1.984066 ACTCTCTAGATACCCCGTGC 58.016 55.000 0.00 0.00 0.00 5.34
4065 4218 0.875728 CTCTCTAGATACCCCGTGCG 59.124 60.000 0.00 0.00 0.00 5.34
4066 4219 1.170919 TCTCTAGATACCCCGTGCGC 61.171 60.000 0.00 0.00 0.00 6.09
4067 4220 1.452953 CTCTAGATACCCCGTGCGCA 61.453 60.000 5.66 5.66 0.00 6.09
4068 4221 0.826256 TCTAGATACCCCGTGCGCAT 60.826 55.000 15.91 0.00 0.00 4.73
4069 4222 0.667487 CTAGATACCCCGTGCGCATG 60.667 60.000 22.83 22.83 0.00 4.06
4070 4223 2.094757 TAGATACCCCGTGCGCATGG 62.095 60.000 36.78 36.78 37.23 3.66
4082 4235 2.124570 GCATGGCGTCCTGGACAT 60.125 61.111 25.42 9.81 35.55 3.06
4083 4236 2.182842 GCATGGCGTCCTGGACATC 61.183 63.158 25.42 16.56 31.82 3.06
4084 4237 1.524621 CATGGCGTCCTGGACATCC 60.525 63.158 25.42 23.30 31.82 3.51
4085 4238 3.094062 ATGGCGTCCTGGACATCCG 62.094 63.158 25.42 13.23 39.43 4.18
4086 4239 3.771160 GGCGTCCTGGACATCCGT 61.771 66.667 25.42 0.00 39.43 4.69
4087 4240 2.509336 GCGTCCTGGACATCCGTG 60.509 66.667 25.42 9.87 39.43 4.94
4088 4241 2.509336 CGTCCTGGACATCCGTGC 60.509 66.667 25.42 0.00 39.43 5.34
4089 4242 2.662596 GTCCTGGACATCCGTGCA 59.337 61.111 21.70 0.00 41.75 4.57
4090 4243 1.741770 GTCCTGGACATCCGTGCAC 60.742 63.158 21.70 6.82 38.73 4.57
4091 4244 2.213513 TCCTGGACATCCGTGCACA 61.214 57.895 18.64 0.00 38.73 4.57
4092 4245 2.034879 CCTGGACATCCGTGCACAC 61.035 63.158 18.64 0.43 38.73 3.82
4105 4258 2.124067 CACACGGGGTGGTGGTTT 60.124 61.111 1.43 0.00 44.04 3.27
4106 4259 2.190841 CACACGGGGTGGTGGTTTC 61.191 63.158 1.43 0.00 44.04 2.78
4107 4260 2.380285 ACACGGGGTGGTGGTTTCT 61.380 57.895 0.42 0.00 42.23 2.52
4108 4261 1.152839 CACGGGGTGGTGGTTTCTT 60.153 57.895 0.00 0.00 34.27 2.52
4109 4262 1.149854 ACGGGGTGGTGGTTTCTTC 59.850 57.895 0.00 0.00 0.00 2.87
4110 4263 1.350310 ACGGGGTGGTGGTTTCTTCT 61.350 55.000 0.00 0.00 0.00 2.85
4111 4264 0.179001 CGGGGTGGTGGTTTCTTCTT 60.179 55.000 0.00 0.00 0.00 2.52
4112 4265 1.752788 CGGGGTGGTGGTTTCTTCTTT 60.753 52.381 0.00 0.00 0.00 2.52
4113 4266 1.686587 GGGGTGGTGGTTTCTTCTTTG 59.313 52.381 0.00 0.00 0.00 2.77
4114 4267 2.661718 GGGTGGTGGTTTCTTCTTTGA 58.338 47.619 0.00 0.00 0.00 2.69
4115 4268 2.361119 GGGTGGTGGTTTCTTCTTTGAC 59.639 50.000 0.00 0.00 0.00 3.18
4116 4269 3.020984 GGTGGTGGTTTCTTCTTTGACA 58.979 45.455 0.00 0.00 0.00 3.58
4117 4270 3.181490 GGTGGTGGTTTCTTCTTTGACAC 60.181 47.826 0.00 0.00 0.00 3.67
4118 4271 3.020984 TGGTGGTTTCTTCTTTGACACC 58.979 45.455 0.00 0.00 45.28 4.16
4119 4272 2.361119 GGTGGTTTCTTCTTTGACACCC 59.639 50.000 0.00 0.00 40.64 4.61
4120 4273 2.361119 GTGGTTTCTTCTTTGACACCCC 59.639 50.000 0.00 0.00 36.31 4.95
4121 4274 2.024846 TGGTTTCTTCTTTGACACCCCA 60.025 45.455 0.00 0.00 36.31 4.96
4122 4275 2.361119 GGTTTCTTCTTTGACACCCCAC 59.639 50.000 0.00 0.00 32.30 4.61
4123 4276 1.961793 TTCTTCTTTGACACCCCACG 58.038 50.000 0.00 0.00 0.00 4.94
4124 4277 0.834612 TCTTCTTTGACACCCCACGT 59.165 50.000 0.00 0.00 0.00 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.504916 CTCTCCTCGTGCCGCTGG 62.505 72.222 0.00 0.00 0.00 4.85
27 28 3.408501 CTCTCTCCTCGTGCCGCTG 62.409 68.421 0.00 0.00 0.00 5.18
28 29 3.137459 CTCTCTCCTCGTGCCGCT 61.137 66.667 0.00 0.00 0.00 5.52
29 30 3.444805 ACTCTCTCCTCGTGCCGC 61.445 66.667 0.00 0.00 0.00 6.53
30 31 2.336478 ACACTCTCTCCTCGTGCCG 61.336 63.158 0.00 0.00 32.07 5.69
31 32 1.214062 CACACTCTCTCCTCGTGCC 59.786 63.158 0.00 0.00 32.07 5.01
32 33 1.214062 CCACACTCTCTCCTCGTGC 59.786 63.158 0.00 0.00 32.07 5.34
33 34 1.886585 CCCACACTCTCTCCTCGTG 59.113 63.158 0.00 0.00 34.92 4.35
34 35 1.979693 GCCCACACTCTCTCCTCGT 60.980 63.158 0.00 0.00 0.00 4.18
35 36 0.394488 TAGCCCACACTCTCTCCTCG 60.394 60.000 0.00 0.00 0.00 4.63
36 37 1.398692 CTAGCCCACACTCTCTCCTC 58.601 60.000 0.00 0.00 0.00 3.71
37 38 0.032615 CCTAGCCCACACTCTCTCCT 60.033 60.000 0.00 0.00 0.00 3.69
38 39 0.033011 TCCTAGCCCACACTCTCTCC 60.033 60.000 0.00 0.00 0.00 3.71
39 40 1.064314 TCTCCTAGCCCACACTCTCTC 60.064 57.143 0.00 0.00 0.00 3.20
40 41 1.003646 TCTCCTAGCCCACACTCTCT 58.996 55.000 0.00 0.00 0.00 3.10
41 42 1.064314 TCTCTCCTAGCCCACACTCTC 60.064 57.143 0.00 0.00 0.00 3.20
42 43 1.003646 TCTCTCCTAGCCCACACTCT 58.996 55.000 0.00 0.00 0.00 3.24
43 44 1.478916 GTTCTCTCCTAGCCCACACTC 59.521 57.143 0.00 0.00 0.00 3.51
44 45 1.562783 GTTCTCTCCTAGCCCACACT 58.437 55.000 0.00 0.00 0.00 3.55
45 46 0.537653 GGTTCTCTCCTAGCCCACAC 59.462 60.000 0.00 0.00 0.00 3.82
46 47 0.413832 AGGTTCTCTCCTAGCCCACA 59.586 55.000 0.00 0.00 35.87 4.17
47 48 1.208293 CAAGGTTCTCTCCTAGCCCAC 59.792 57.143 0.00 0.00 36.74 4.61
48 49 1.573108 CAAGGTTCTCTCCTAGCCCA 58.427 55.000 0.00 0.00 36.74 5.36
49 50 0.179234 GCAAGGTTCTCTCCTAGCCC 59.821 60.000 0.00 0.00 36.74 5.19
50 51 0.905357 TGCAAGGTTCTCTCCTAGCC 59.095 55.000 0.00 0.00 36.74 3.93
51 52 1.827969 TCTGCAAGGTTCTCTCCTAGC 59.172 52.381 0.00 0.00 36.74 3.42
52 53 4.543590 TTTCTGCAAGGTTCTCTCCTAG 57.456 45.455 0.00 0.00 36.74 3.02
53 54 4.263068 CCTTTTCTGCAAGGTTCTCTCCTA 60.263 45.833 0.00 0.00 38.92 2.94
54 55 3.497584 CCTTTTCTGCAAGGTTCTCTCCT 60.498 47.826 0.00 0.00 38.92 3.69
55 56 2.816672 CCTTTTCTGCAAGGTTCTCTCC 59.183 50.000 0.00 0.00 38.92 3.71
56 57 3.744660 TCCTTTTCTGCAAGGTTCTCTC 58.255 45.455 2.14 0.00 43.62 3.20
57 58 3.864789 TCCTTTTCTGCAAGGTTCTCT 57.135 42.857 2.14 0.00 43.62 3.10
58 59 4.764308 AGATTCCTTTTCTGCAAGGTTCTC 59.236 41.667 2.14 0.00 43.62 2.87
59 60 4.734266 AGATTCCTTTTCTGCAAGGTTCT 58.266 39.130 2.14 3.96 43.62 3.01
60 61 4.520492 TGAGATTCCTTTTCTGCAAGGTTC 59.480 41.667 2.14 1.95 43.62 3.62
61 62 4.473444 TGAGATTCCTTTTCTGCAAGGTT 58.527 39.130 2.14 0.00 43.62 3.50
62 63 4.077822 CTGAGATTCCTTTTCTGCAAGGT 58.922 43.478 2.14 0.00 43.62 3.50
63 64 4.077822 ACTGAGATTCCTTTTCTGCAAGG 58.922 43.478 0.00 0.00 44.45 3.61
64 65 4.758674 TCACTGAGATTCCTTTTCTGCAAG 59.241 41.667 0.00 0.00 0.00 4.01
65 66 4.717877 TCACTGAGATTCCTTTTCTGCAA 58.282 39.130 0.00 0.00 0.00 4.08
66 67 4.356405 TCACTGAGATTCCTTTTCTGCA 57.644 40.909 0.00 0.00 0.00 4.41
67 68 4.438472 GCATCACTGAGATTCCTTTTCTGC 60.438 45.833 0.00 0.00 33.72 4.26
68 69 4.698780 TGCATCACTGAGATTCCTTTTCTG 59.301 41.667 0.00 0.00 33.72 3.02
69 70 4.914983 TGCATCACTGAGATTCCTTTTCT 58.085 39.130 0.00 0.00 33.72 2.52
70 71 5.831702 ATGCATCACTGAGATTCCTTTTC 57.168 39.130 0.00 0.00 33.72 2.29
71 72 6.600882 AAATGCATCACTGAGATTCCTTTT 57.399 33.333 0.00 0.00 33.72 2.27
72 73 7.395489 ACTTAAATGCATCACTGAGATTCCTTT 59.605 33.333 0.00 0.00 33.72 3.11
73 74 6.888632 ACTTAAATGCATCACTGAGATTCCTT 59.111 34.615 0.00 0.00 33.72 3.36
74 75 6.318144 CACTTAAATGCATCACTGAGATTCCT 59.682 38.462 0.00 0.00 33.72 3.36
75 76 6.317140 TCACTTAAATGCATCACTGAGATTCC 59.683 38.462 0.00 0.00 33.72 3.01
76 77 7.312657 TCACTTAAATGCATCACTGAGATTC 57.687 36.000 0.00 0.00 33.72 2.52
77 78 6.183360 GCTCACTTAAATGCATCACTGAGATT 60.183 38.462 17.45 3.49 33.72 2.40
78 79 5.296283 GCTCACTTAAATGCATCACTGAGAT 59.704 40.000 17.45 0.00 37.48 2.75
79 80 4.633126 GCTCACTTAAATGCATCACTGAGA 59.367 41.667 17.45 6.40 0.00 3.27
80 81 4.493708 CGCTCACTTAAATGCATCACTGAG 60.494 45.833 0.00 7.46 0.00 3.35
81 82 3.371898 CGCTCACTTAAATGCATCACTGA 59.628 43.478 0.00 0.00 0.00 3.41
82 83 3.125829 ACGCTCACTTAAATGCATCACTG 59.874 43.478 0.00 0.00 0.00 3.66
83 84 3.125829 CACGCTCACTTAAATGCATCACT 59.874 43.478 0.00 0.00 0.00 3.41
84 85 3.125146 TCACGCTCACTTAAATGCATCAC 59.875 43.478 0.00 0.00 0.00 3.06
85 86 3.125146 GTCACGCTCACTTAAATGCATCA 59.875 43.478 0.00 0.00 0.00 3.07
86 87 3.125146 TGTCACGCTCACTTAAATGCATC 59.875 43.478 0.00 0.00 0.00 3.91
87 88 3.073678 TGTCACGCTCACTTAAATGCAT 58.926 40.909 0.00 0.00 0.00 3.96
88 89 2.480037 CTGTCACGCTCACTTAAATGCA 59.520 45.455 0.00 0.00 0.00 3.96
89 90 2.480419 ACTGTCACGCTCACTTAAATGC 59.520 45.455 0.00 0.00 0.00 3.56
90 91 3.120546 CCACTGTCACGCTCACTTAAATG 60.121 47.826 0.00 0.00 0.00 2.32
91 92 3.067106 CCACTGTCACGCTCACTTAAAT 58.933 45.455 0.00 0.00 0.00 1.40
92 93 2.159014 ACCACTGTCACGCTCACTTAAA 60.159 45.455 0.00 0.00 0.00 1.52
93 94 1.411246 ACCACTGTCACGCTCACTTAA 59.589 47.619 0.00 0.00 0.00 1.85
94 95 1.037493 ACCACTGTCACGCTCACTTA 58.963 50.000 0.00 0.00 0.00 2.24
95 96 0.530650 CACCACTGTCACGCTCACTT 60.531 55.000 0.00 0.00 0.00 3.16
101 102 0.235665 CATTCACACCACTGTCACGC 59.764 55.000 0.00 0.00 0.00 5.34
106 107 0.884704 GCGGACATTCACACCACTGT 60.885 55.000 0.00 0.00 0.00 3.55
114 115 2.700773 GGGGCTTGCGGACATTCAC 61.701 63.158 0.00 0.00 0.00 3.18
115 116 1.558167 TAGGGGCTTGCGGACATTCA 61.558 55.000 0.00 0.00 0.00 2.57
117 118 1.224592 CTAGGGGCTTGCGGACATT 59.775 57.895 0.00 0.00 0.00 2.71
119 120 1.774894 AAACTAGGGGCTTGCGGACA 61.775 55.000 0.00 0.00 0.00 4.02
121 122 1.002624 CAAACTAGGGGCTTGCGGA 60.003 57.895 0.00 0.00 0.00 5.54
135 136 6.764877 TTCTCTCGTAAACATGAGACAAAC 57.235 37.500 0.00 0.00 36.36 2.93
139 140 5.164041 GCAGTTTCTCTCGTAAACATGAGAC 60.164 44.000 0.00 0.00 38.92 3.36
143 144 3.428870 ACGCAGTTTCTCTCGTAAACATG 59.571 43.478 0.00 0.00 37.78 3.21
144 145 3.650139 ACGCAGTTTCTCTCGTAAACAT 58.350 40.909 0.00 0.00 37.78 2.71
145 146 3.088194 ACGCAGTTTCTCTCGTAAACA 57.912 42.857 0.00 0.00 37.78 2.83
183 184 2.857483 TCCAATATGGGCATGTAACCG 58.143 47.619 0.00 0.00 38.32 4.44
184 185 4.218417 GTCATCCAATATGGGCATGTAACC 59.782 45.833 0.00 0.00 38.32 2.85
185 186 4.826733 TGTCATCCAATATGGGCATGTAAC 59.173 41.667 0.00 0.00 38.32 2.50
186 187 4.826733 GTGTCATCCAATATGGGCATGTAA 59.173 41.667 0.00 0.00 38.32 2.41
187 188 4.141298 TGTGTCATCCAATATGGGCATGTA 60.141 41.667 0.00 0.00 38.32 2.29
189 190 3.224269 TGTGTCATCCAATATGGGCATG 58.776 45.455 0.00 0.00 38.32 4.06
190 191 3.598693 TGTGTCATCCAATATGGGCAT 57.401 42.857 0.00 0.00 38.32 4.40
191 192 3.023119 GTTGTGTCATCCAATATGGGCA 58.977 45.455 0.00 0.00 38.32 5.36
192 193 3.023119 TGTTGTGTCATCCAATATGGGC 58.977 45.455 0.00 0.00 38.32 5.36
193 194 4.272489 AGTGTTGTGTCATCCAATATGGG 58.728 43.478 0.00 0.00 38.32 4.00
194 195 5.902613 AAGTGTTGTGTCATCCAATATGG 57.097 39.130 0.00 0.00 39.43 2.74
196 197 6.942005 TCTCAAAGTGTTGTGTCATCCAATAT 59.058 34.615 0.00 0.00 36.07 1.28
197 198 6.204688 GTCTCAAAGTGTTGTGTCATCCAATA 59.795 38.462 0.00 0.00 36.07 1.90
198 199 5.009010 GTCTCAAAGTGTTGTGTCATCCAAT 59.991 40.000 0.00 0.00 36.07 3.16
199 200 4.335315 GTCTCAAAGTGTTGTGTCATCCAA 59.665 41.667 0.00 0.00 36.07 3.53
201 202 3.251004 GGTCTCAAAGTGTTGTGTCATCC 59.749 47.826 0.00 0.00 36.07 3.51
203 204 2.872245 CGGTCTCAAAGTGTTGTGTCAT 59.128 45.455 0.00 0.00 36.07 3.06
232 240 0.732571 AAACAGCCCGCATATGTTCG 59.267 50.000 4.29 0.01 36.18 3.95
233 241 3.377172 ACTTAAACAGCCCGCATATGTTC 59.623 43.478 4.29 0.00 36.18 3.18
243 251 2.028876 ACACCAACACTTAAACAGCCC 58.971 47.619 0.00 0.00 0.00 5.19
258 266 4.504864 CCAGTAAAGACATCTCCAACACCA 60.505 45.833 0.00 0.00 0.00 4.17
272 280 2.237143 CCCAGCAGATCACCAGTAAAGA 59.763 50.000 0.00 0.00 0.00 2.52
279 287 2.108168 GTAGTACCCAGCAGATCACCA 58.892 52.381 0.00 0.00 0.00 4.17
365 373 4.916249 CGTAGTATTTCATACTCCCTTCGC 59.084 45.833 0.00 0.00 44.55 4.70
382 390 3.873361 CCGAGTCCTTGTACATCGTAGTA 59.127 47.826 13.16 0.00 0.00 1.82
383 391 2.681848 CCGAGTCCTTGTACATCGTAGT 59.318 50.000 13.16 0.00 0.00 2.73
384 392 2.941064 TCCGAGTCCTTGTACATCGTAG 59.059 50.000 13.16 0.82 0.00 3.51
432 440 1.239347 GCTCTTTGGTCCCACTCAAC 58.761 55.000 0.00 0.00 0.00 3.18
438 446 0.040058 ATGCATGCTCTTTGGTCCCA 59.960 50.000 20.33 0.00 0.00 4.37
455 463 2.963782 GGGAGTACTGTAGGGGTACATG 59.036 54.545 0.00 0.00 41.16 3.21
456 464 2.423947 CGGGAGTACTGTAGGGGTACAT 60.424 54.545 0.00 0.00 41.16 2.29
457 465 1.064463 CGGGAGTACTGTAGGGGTACA 60.064 57.143 0.00 0.00 41.16 2.90
458 466 1.685148 CGGGAGTACTGTAGGGGTAC 58.315 60.000 0.00 0.00 39.60 3.34
459 467 0.106519 GCGGGAGTACTGTAGGGGTA 60.107 60.000 0.00 0.00 0.00 3.69
460 468 1.380920 GCGGGAGTACTGTAGGGGT 60.381 63.158 0.00 0.00 0.00 4.95
461 469 1.076192 AGCGGGAGTACTGTAGGGG 60.076 63.158 0.00 0.00 0.00 4.79
462 470 2.017559 GCAGCGGGAGTACTGTAGGG 62.018 65.000 0.00 0.00 36.26 3.53
463 471 1.437986 GCAGCGGGAGTACTGTAGG 59.562 63.158 0.00 0.00 36.26 3.18
464 472 1.437986 GGCAGCGGGAGTACTGTAG 59.562 63.158 0.00 0.00 36.26 2.74
465 473 2.056223 GGGCAGCGGGAGTACTGTA 61.056 63.158 0.00 0.00 36.26 2.74
466 474 3.391382 GGGCAGCGGGAGTACTGT 61.391 66.667 0.00 0.00 36.26 3.55
467 475 4.514577 CGGGCAGCGGGAGTACTG 62.515 72.222 0.00 0.00 36.96 2.74
512 528 3.618351 GGTGTCAGTGCTAGTAGTAGGA 58.382 50.000 6.73 0.33 0.00 2.94
513 529 2.355132 CGGTGTCAGTGCTAGTAGTAGG 59.645 54.545 6.73 0.00 0.00 3.18
514 530 2.223294 GCGGTGTCAGTGCTAGTAGTAG 60.223 54.545 0.00 0.00 0.00 2.57
515 531 1.741706 GCGGTGTCAGTGCTAGTAGTA 59.258 52.381 0.00 0.00 0.00 1.82
516 532 0.526662 GCGGTGTCAGTGCTAGTAGT 59.473 55.000 0.00 0.00 0.00 2.73
519 535 1.006102 GTGCGGTGTCAGTGCTAGT 60.006 57.895 0.00 0.00 0.00 2.57
521 537 2.342279 GGTGCGGTGTCAGTGCTA 59.658 61.111 0.00 0.00 0.00 3.49
526 542 3.036084 GTGTCGGTGCGGTGTCAG 61.036 66.667 0.00 0.00 0.00 3.51
533 553 1.073216 GTGATCTGAGTGTCGGTGCG 61.073 60.000 0.00 0.00 0.00 5.34
546 566 2.768253 TGGCGAGACATTTGTGATCT 57.232 45.000 0.00 0.00 0.00 2.75
606 628 3.351794 TTTGTTGTCACCACTGTACCA 57.648 42.857 0.00 0.00 0.00 3.25
675 710 0.940126 CGCTGCTTCAGACACAGTTT 59.060 50.000 0.00 0.00 32.44 2.66
679 714 2.666190 GCCGCTGCTTCAGACACA 60.666 61.111 0.00 0.00 32.44 3.72
731 766 0.736325 CTGTGCGCCACTGGTACTAC 60.736 60.000 4.18 0.00 35.11 2.73
732 767 1.589630 CTGTGCGCCACTGGTACTA 59.410 57.895 4.18 0.00 35.11 1.82
733 768 2.343758 CTGTGCGCCACTGGTACT 59.656 61.111 4.18 0.00 35.11 2.73
961 1012 0.457851 CCTCCAGAGTCTTGCTACGG 59.542 60.000 0.00 0.00 0.00 4.02
1263 1314 0.670546 ACCATGAGAGCGGTCAAACG 60.671 55.000 18.15 2.32 0.00 3.60
1404 1467 2.035576 AGGCGGATAAGTTAGCTTACCG 59.964 50.000 23.22 23.22 44.70 4.02
1537 1602 8.870116 AGCAAAAGATATTACCAAAAGAAACCT 58.130 29.630 0.00 0.00 0.00 3.50
1588 1661 1.518367 TCTCCTCTCCTCTCCTCTCC 58.482 60.000 0.00 0.00 0.00 3.71
1589 1662 2.749800 GCTTCTCCTCTCCTCTCCTCTC 60.750 59.091 0.00 0.00 0.00 3.20
1590 1663 1.215423 GCTTCTCCTCTCCTCTCCTCT 59.785 57.143 0.00 0.00 0.00 3.69
1591 1664 1.064017 TGCTTCTCCTCTCCTCTCCTC 60.064 57.143 0.00 0.00 0.00 3.71
1592 1665 1.006813 TGCTTCTCCTCTCCTCTCCT 58.993 55.000 0.00 0.00 0.00 3.69
1593 1666 1.859302 TTGCTTCTCCTCTCCTCTCC 58.141 55.000 0.00 0.00 0.00 3.71
1594 1667 2.102925 CCATTGCTTCTCCTCTCCTCTC 59.897 54.545 0.00 0.00 0.00 3.20
1595 1668 2.117865 CCATTGCTTCTCCTCTCCTCT 58.882 52.381 0.00 0.00 0.00 3.69
1596 1669 2.114616 TCCATTGCTTCTCCTCTCCTC 58.885 52.381 0.00 0.00 0.00 3.71
1597 1670 2.238395 GTTCCATTGCTTCTCCTCTCCT 59.762 50.000 0.00 0.00 0.00 3.69
1598 1671 2.637947 GTTCCATTGCTTCTCCTCTCC 58.362 52.381 0.00 0.00 0.00 3.71
1599 1672 2.026822 TGGTTCCATTGCTTCTCCTCTC 60.027 50.000 0.00 0.00 0.00 3.20
1600 1673 1.988107 TGGTTCCATTGCTTCTCCTCT 59.012 47.619 0.00 0.00 0.00 3.69
1601 1674 2.496899 TGGTTCCATTGCTTCTCCTC 57.503 50.000 0.00 0.00 0.00 3.71
1602 1675 2.357569 GGATGGTTCCATTGCTTCTCCT 60.358 50.000 5.77 0.00 42.12 3.69
1603 1676 2.027385 GGATGGTTCCATTGCTTCTCC 58.973 52.381 5.77 0.00 42.12 3.71
1633 1706 0.390472 AGTTTAGGACGAGCTGCTGC 60.390 55.000 7.01 7.62 40.05 5.25
1634 1707 2.941453 TAGTTTAGGACGAGCTGCTG 57.059 50.000 7.01 1.88 0.00 4.41
1635 1708 2.362717 GGATAGTTTAGGACGAGCTGCT 59.637 50.000 0.00 0.00 0.00 4.24
1636 1709 2.546162 GGGATAGTTTAGGACGAGCTGC 60.546 54.545 0.00 0.00 0.00 5.25
1637 1710 2.959707 AGGGATAGTTTAGGACGAGCTG 59.040 50.000 0.00 0.00 0.00 4.24
1638 1711 2.959707 CAGGGATAGTTTAGGACGAGCT 59.040 50.000 0.00 0.00 0.00 4.09
1639 1712 2.546162 GCAGGGATAGTTTAGGACGAGC 60.546 54.545 0.00 0.00 0.00 5.03
1642 1715 5.475909 TGTATAGCAGGGATAGTTTAGGACG 59.524 44.000 0.00 0.00 0.00 4.79
1643 1716 6.494146 AGTGTATAGCAGGGATAGTTTAGGAC 59.506 42.308 0.00 0.00 0.00 3.85
1644 1717 6.493802 CAGTGTATAGCAGGGATAGTTTAGGA 59.506 42.308 0.00 0.00 0.00 2.94
1683 1781 5.181245 ACCACACTCTTCACCGAATTATTTG 59.819 40.000 0.00 0.00 0.00 2.32
1702 1800 1.065926 GTGAGATCTGATGCCACCACA 60.066 52.381 0.00 0.00 0.00 4.17
1708 1806 1.126488 TCCTGGTGAGATCTGATGCC 58.874 55.000 0.00 0.00 0.00 4.40
1711 1809 2.770802 CCAGTTCCTGGTGAGATCTGAT 59.229 50.000 0.00 0.00 45.82 2.90
1723 1821 4.279169 TGCAAGAAGAAAATCCAGTTCCTG 59.721 41.667 0.00 0.00 0.00 3.86
1839 1958 3.057548 CACATCGGCTTGCTGGCA 61.058 61.111 1.30 0.00 41.89 4.92
1992 2111 4.712425 ACGTGGGACAGCGCGTAC 62.712 66.667 8.43 3.60 41.80 3.67
2226 2345 3.135530 GGAAGATCTGGATGTACCTGCTT 59.864 47.826 0.00 0.00 39.86 3.91
3013 3132 3.711933 CGACGACGGTGAGCTAAAGCT 62.712 57.143 3.65 3.65 44.52 3.74
3014 3133 1.403972 CGACGACGGTGAGCTAAAGC 61.404 60.000 0.00 0.00 37.29 3.51
3021 3141 2.579787 GATGGCGACGACGGTGAG 60.580 66.667 9.67 0.00 40.15 3.51
3057 3177 3.491342 TGATACTAGGCTACCAGCAGAG 58.509 50.000 0.00 0.00 44.75 3.35
3058 3178 3.595190 TGATACTAGGCTACCAGCAGA 57.405 47.619 0.00 0.00 44.75 4.26
3084 3204 8.046708 TCTGCATCCATTTTGTACACTATTAGT 58.953 33.333 0.00 0.00 0.00 2.24
3132 3252 2.028385 ACGGATTAGGCGAAAACAGAGT 60.028 45.455 0.00 0.00 0.00 3.24
3158 3278 3.957027 TAGTACAGTGCACCGCGCG 62.957 63.158 25.67 25.67 46.97 6.86
3159 3279 2.126228 TAGTACAGTGCACCGCGC 60.126 61.111 14.63 0.00 42.89 6.86
3232 3356 0.308993 GTCTGGTTTGTGCTGAGTGC 59.691 55.000 0.00 0.00 43.25 4.40
3265 3396 3.255642 GGGCATTGCTTCTTGTAACAGAA 59.744 43.478 8.82 0.00 0.00 3.02
3274 3405 5.425196 AAAATACATGGGCATTGCTTCTT 57.575 34.783 8.82 0.00 0.00 2.52
3306 3437 7.369607 TGTACGTGTACTACAAAATTGCTAGA 58.630 34.615 11.14 0.00 37.00 2.43
3307 3438 7.571089 TGTACGTGTACTACAAAATTGCTAG 57.429 36.000 11.14 0.00 37.00 3.42
3353 3485 5.368523 TCACTTTCCTCTTTCTAGGGAAACA 59.631 40.000 6.16 0.00 42.10 2.83
3375 3507 6.946340 TCAGCTTTGTAATATGGACTTCTCA 58.054 36.000 0.00 0.00 0.00 3.27
3465 3614 7.689299 TGATTTTTGTCCGGTTTGAAAAATTC 58.311 30.769 19.47 15.78 37.85 2.17
3473 3622 4.568152 AGACTGATTTTTGTCCGGTTTG 57.432 40.909 0.00 0.00 34.02 2.93
3491 3640 1.967319 TGTTTGACTGGAGCCAAGAC 58.033 50.000 0.00 0.00 0.00 3.01
3513 3662 4.952957 TGACTCAAAACAAGGATGAAACCA 59.047 37.500 0.00 0.00 0.00 3.67
3549 3698 5.221130 TCAAAACGACTCAAAACGGTTTTT 58.779 33.333 15.77 2.53 44.95 1.94
3550 3699 4.796369 TCAAAACGACTCAAAACGGTTTT 58.204 34.783 12.86 12.86 44.95 2.43
3552 3701 4.594136 GATCAAAACGACTCAAAACGGTT 58.406 39.130 0.00 0.00 41.17 4.44
3553 3702 3.302870 CGATCAAAACGACTCAAAACGGT 60.303 43.478 0.00 0.00 0.00 4.83
3554 3703 3.215244 CGATCAAAACGACTCAAAACGG 58.785 45.455 0.00 0.00 0.00 4.44
3555 3704 3.215244 CCGATCAAAACGACTCAAAACG 58.785 45.455 0.00 0.00 0.00 3.60
3556 3705 4.205323 ACCGATCAAAACGACTCAAAAC 57.795 40.909 0.00 0.00 0.00 2.43
3557 3706 3.872182 TGACCGATCAAAACGACTCAAAA 59.128 39.130 0.00 0.00 0.00 2.44
3558 3707 3.459145 TGACCGATCAAAACGACTCAAA 58.541 40.909 0.00 0.00 0.00 2.69
3559 3708 3.100658 TGACCGATCAAAACGACTCAA 57.899 42.857 0.00 0.00 0.00 3.02
3560 3709 2.804697 TGACCGATCAAAACGACTCA 57.195 45.000 0.00 0.00 0.00 3.41
3579 3728 3.069443 ACTGTGATGCCGATTTGGTTTTT 59.931 39.130 0.00 0.00 41.21 1.94
3592 3741 2.606308 CCTGCACTTTCAACTGTGATGC 60.606 50.000 0.00 0.00 37.66 3.91
3716 3865 2.277008 ATGGAGGAAGGGTCAGTCAT 57.723 50.000 0.00 0.00 0.00 3.06
3717 3866 2.044793 AATGGAGGAAGGGTCAGTCA 57.955 50.000 0.00 0.00 0.00 3.41
3720 3869 3.439857 TTGAAATGGAGGAAGGGTCAG 57.560 47.619 0.00 0.00 0.00 3.51
3721 3870 3.893753 TTTGAAATGGAGGAAGGGTCA 57.106 42.857 0.00 0.00 0.00 4.02
3744 3897 6.744056 GCCATTGGAAAACCAGGTCTTTAATT 60.744 38.462 6.95 0.00 0.00 1.40
3752 3905 2.378547 TCTAGCCATTGGAAAACCAGGT 59.621 45.455 6.95 0.00 0.00 4.00
3754 3907 3.445096 CCTTCTAGCCATTGGAAAACCAG 59.555 47.826 6.95 0.00 0.00 4.00
3758 3911 3.456380 AGCCTTCTAGCCATTGGAAAA 57.544 42.857 6.95 0.00 0.00 2.29
3764 3917 2.789409 ACGAAAGCCTTCTAGCCATT 57.211 45.000 0.00 0.00 0.00 3.16
3765 3918 2.789409 AACGAAAGCCTTCTAGCCAT 57.211 45.000 0.00 0.00 0.00 4.40
3766 3919 2.552315 CAAAACGAAAGCCTTCTAGCCA 59.448 45.455 0.00 0.00 0.00 4.75
3789 3942 4.573201 AGTTTTCCAACGACTCAAATCGAA 59.427 37.500 1.63 0.00 45.13 3.71
3801 3954 7.816031 TCCTCTTAATAGTACAGTTTTCCAACG 59.184 37.037 0.00 0.00 38.03 4.10
3804 3957 8.431910 AGTCCTCTTAATAGTACAGTTTTCCA 57.568 34.615 0.00 0.00 0.00 3.53
3812 3965 6.238676 GCACGATGAGTCCTCTTAATAGTACA 60.239 42.308 0.00 0.00 0.00 2.90
3837 3990 7.696755 TGAATTATCTCCACACGAAATTCATG 58.303 34.615 4.62 0.00 38.02 3.07
3839 3992 7.680442 TTGAATTATCTCCACACGAAATTCA 57.320 32.000 4.62 4.62 39.98 2.57
3844 3997 7.504924 AAGTTTTGAATTATCTCCACACGAA 57.495 32.000 0.00 0.00 0.00 3.85
3845 3998 8.786826 ATAAGTTTTGAATTATCTCCACACGA 57.213 30.769 0.00 0.00 0.00 4.35
3850 4003 9.983024 TGGGTTATAAGTTTTGAATTATCTCCA 57.017 29.630 0.00 0.00 0.00 3.86
3857 4010 9.772973 GGAAAGTTGGGTTATAAGTTTTGAATT 57.227 29.630 0.00 0.00 32.45 2.17
3868 4021 6.961721 AGTAGGTGTAGGAAAGTTGGGTTATA 59.038 38.462 0.00 0.00 0.00 0.98
3869 4022 5.789054 AGTAGGTGTAGGAAAGTTGGGTTAT 59.211 40.000 0.00 0.00 0.00 1.89
3870 4023 5.157395 AGTAGGTGTAGGAAAGTTGGGTTA 58.843 41.667 0.00 0.00 0.00 2.85
3871 4024 3.978672 AGTAGGTGTAGGAAAGTTGGGTT 59.021 43.478 0.00 0.00 0.00 4.11
3892 4045 7.189512 GCACACTGCTCAAGGTAATTTAATAG 58.810 38.462 0.00 0.00 40.96 1.73
3893 4046 7.083875 GCACACTGCTCAAGGTAATTTAATA 57.916 36.000 0.00 0.00 40.96 0.98
3895 4048 5.371115 GCACACTGCTCAAGGTAATTTAA 57.629 39.130 0.00 0.00 40.96 1.52
3910 4063 0.039437 ACCTTCGTACGAGCACACTG 60.039 55.000 18.64 5.75 0.00 3.66
3919 4072 4.367386 AACTCAAGGATACCTTCGTACG 57.633 45.455 9.53 9.53 42.67 3.67
3925 4078 5.546499 TCCTGTTGTAACTCAAGGATACCTT 59.454 40.000 0.00 0.00 45.88 3.50
3926 4079 5.091552 TCCTGTTGTAACTCAAGGATACCT 58.908 41.667 0.00 0.00 36.66 3.08
3927 4080 5.416271 TCCTGTTGTAACTCAAGGATACC 57.584 43.478 0.00 0.00 36.66 2.73
3928 4081 7.923414 ATTTCCTGTTGTAACTCAAGGATAC 57.077 36.000 3.92 0.00 36.66 2.24
3929 4082 9.444600 GTAATTTCCTGTTGTAACTCAAGGATA 57.555 33.333 3.92 1.10 36.66 2.59
3930 4083 7.942341 TGTAATTTCCTGTTGTAACTCAAGGAT 59.058 33.333 3.92 0.00 36.66 3.24
3931 4084 7.284074 TGTAATTTCCTGTTGTAACTCAAGGA 58.716 34.615 0.00 0.00 36.66 3.36
3932 4085 7.308589 CCTGTAATTTCCTGTTGTAACTCAAGG 60.309 40.741 0.00 0.00 36.66 3.61
3933 4086 7.444183 TCCTGTAATTTCCTGTTGTAACTCAAG 59.556 37.037 0.00 0.00 36.66 3.02
3934 4087 7.284074 TCCTGTAATTTCCTGTTGTAACTCAA 58.716 34.615 0.00 0.00 0.00 3.02
3935 4088 6.833041 TCCTGTAATTTCCTGTTGTAACTCA 58.167 36.000 0.00 0.00 0.00 3.41
3936 4089 7.923414 ATCCTGTAATTTCCTGTTGTAACTC 57.077 36.000 0.00 0.00 0.00 3.01
3937 4090 7.827729 GGTATCCTGTAATTTCCTGTTGTAACT 59.172 37.037 0.00 0.00 0.00 2.24
3938 4091 7.066645 GGGTATCCTGTAATTTCCTGTTGTAAC 59.933 40.741 0.00 0.00 0.00 2.50
3939 4092 7.114095 GGGTATCCTGTAATTTCCTGTTGTAA 58.886 38.462 0.00 0.00 0.00 2.41
3940 4093 6.353255 GGGGTATCCTGTAATTTCCTGTTGTA 60.353 42.308 0.00 0.00 0.00 2.41
3941 4094 5.506708 GGGTATCCTGTAATTTCCTGTTGT 58.493 41.667 0.00 0.00 0.00 3.32
3942 4095 4.887655 GGGGTATCCTGTAATTTCCTGTTG 59.112 45.833 0.00 0.00 0.00 3.33
3943 4096 4.384868 CGGGGTATCCTGTAATTTCCTGTT 60.385 45.833 0.00 0.00 34.69 3.16
3944 4097 3.135895 CGGGGTATCCTGTAATTTCCTGT 59.864 47.826 0.00 0.00 34.69 4.00
3945 4098 3.740115 CGGGGTATCCTGTAATTTCCTG 58.260 50.000 0.00 0.00 34.69 3.86
3955 4108 4.155733 TGCGCACGGGGTATCCTG 62.156 66.667 5.66 0.00 45.02 3.86
3956 4109 4.157120 GTGCGCACGGGGTATCCT 62.157 66.667 26.77 0.00 0.00 3.24
3966 4119 1.878522 CTGACTATCCCGTGCGCAC 60.879 63.158 30.42 30.42 0.00 5.34
3967 4120 1.033202 TACTGACTATCCCGTGCGCA 61.033 55.000 5.66 5.66 0.00 6.09
3968 4121 0.317938 CTACTGACTATCCCGTGCGC 60.318 60.000 0.00 0.00 0.00 6.09
3969 4122 0.317938 GCTACTGACTATCCCGTGCG 60.318 60.000 0.00 0.00 0.00 5.34
3970 4123 1.001158 GAGCTACTGACTATCCCGTGC 60.001 57.143 0.00 0.00 0.00 5.34
3971 4124 2.550606 GAGAGCTACTGACTATCCCGTG 59.449 54.545 0.00 0.00 0.00 4.94
3972 4125 2.440253 AGAGAGCTACTGACTATCCCGT 59.560 50.000 0.00 0.00 0.00 5.28
3973 4126 2.811431 CAGAGAGCTACTGACTATCCCG 59.189 54.545 13.16 0.00 37.54 5.14
3974 4127 3.153919 CCAGAGAGCTACTGACTATCCC 58.846 54.545 18.24 0.00 37.54 3.85
3975 4128 3.818773 GTCCAGAGAGCTACTGACTATCC 59.181 52.174 18.24 0.00 37.54 2.59
3976 4129 4.274950 GTGTCCAGAGAGCTACTGACTATC 59.725 50.000 18.24 7.28 37.54 2.08
3977 4130 4.204012 GTGTCCAGAGAGCTACTGACTAT 58.796 47.826 18.24 0.00 37.54 2.12
3978 4131 3.611970 GTGTCCAGAGAGCTACTGACTA 58.388 50.000 18.24 4.67 37.54 2.59
3979 4132 2.442413 GTGTCCAGAGAGCTACTGACT 58.558 52.381 18.24 0.00 37.54 3.41
3980 4133 1.474879 GGTGTCCAGAGAGCTACTGAC 59.525 57.143 18.24 14.56 37.54 3.51
3981 4134 1.617263 GGGTGTCCAGAGAGCTACTGA 60.617 57.143 18.24 5.59 37.54 3.41
3982 4135 0.820871 GGGTGTCCAGAGAGCTACTG 59.179 60.000 11.90 11.90 35.43 2.74
3983 4136 0.409876 TGGGTGTCCAGAGAGCTACT 59.590 55.000 0.00 0.00 38.32 2.57
3984 4137 0.533032 GTGGGTGTCCAGAGAGCTAC 59.467 60.000 0.00 0.00 45.05 3.58
3985 4138 0.409876 AGTGGGTGTCCAGAGAGCTA 59.590 55.000 0.00 0.00 45.05 3.32
3986 4139 1.157276 AGTGGGTGTCCAGAGAGCT 59.843 57.895 0.00 0.00 45.05 4.09
3987 4140 1.294780 CAGTGGGTGTCCAGAGAGC 59.705 63.158 0.00 0.00 45.05 4.09
3988 4141 0.319728 CACAGTGGGTGTCCAGAGAG 59.680 60.000 0.00 0.00 45.05 3.20
3989 4142 2.440946 CACAGTGGGTGTCCAGAGA 58.559 57.895 0.00 0.00 45.05 3.10
3998 4151 0.178970 AGTCCTCGTACACAGTGGGT 60.179 55.000 2.22 2.22 0.00 4.51
3999 4152 0.966920 AAGTCCTCGTACACAGTGGG 59.033 55.000 5.31 0.00 0.00 4.61
4000 4153 2.035449 TCAAAGTCCTCGTACACAGTGG 59.965 50.000 5.31 0.00 0.00 4.00
4001 4154 3.050619 GTCAAAGTCCTCGTACACAGTG 58.949 50.000 0.00 0.00 0.00 3.66
4002 4155 2.035576 GGTCAAAGTCCTCGTACACAGT 59.964 50.000 0.00 0.00 0.00 3.55
4003 4156 2.609737 GGGTCAAAGTCCTCGTACACAG 60.610 54.545 0.00 0.00 0.00 3.66
4004 4157 1.342174 GGGTCAAAGTCCTCGTACACA 59.658 52.381 0.00 0.00 0.00 3.72
4005 4158 1.668047 CGGGTCAAAGTCCTCGTACAC 60.668 57.143 0.00 0.00 0.00 2.90
4006 4159 0.599558 CGGGTCAAAGTCCTCGTACA 59.400 55.000 0.00 0.00 0.00 2.90
4007 4160 0.600057 ACGGGTCAAAGTCCTCGTAC 59.400 55.000 0.00 0.00 33.00 3.67
4008 4161 0.599558 CACGGGTCAAAGTCCTCGTA 59.400 55.000 0.00 0.00 33.28 3.43
4009 4162 1.366366 CACGGGTCAAAGTCCTCGT 59.634 57.895 0.00 0.00 34.24 4.18
4010 4163 0.944311 CACACGGGTCAAAGTCCTCG 60.944 60.000 0.00 0.00 0.00 4.63
4011 4164 1.228657 GCACACGGGTCAAAGTCCTC 61.229 60.000 0.00 0.00 0.00 3.71
4012 4165 1.227853 GCACACGGGTCAAAGTCCT 60.228 57.895 0.00 0.00 0.00 3.85
4013 4166 1.525077 TGCACACGGGTCAAAGTCC 60.525 57.895 0.00 0.00 0.00 3.85
4014 4167 1.647084 GTGCACACGGGTCAAAGTC 59.353 57.895 13.17 0.00 0.00 3.01
4015 4168 3.821995 GTGCACACGGGTCAAAGT 58.178 55.556 13.17 0.00 0.00 2.66
4032 4185 1.445582 GAGAGTTACACGCCACCCG 60.446 63.158 0.00 0.00 44.21 5.28
4033 4186 1.134560 CTAGAGAGTTACACGCCACCC 59.865 57.143 0.00 0.00 0.00 4.61
4034 4187 2.089980 TCTAGAGAGTTACACGCCACC 58.910 52.381 0.00 0.00 0.00 4.61
4035 4188 4.261114 GGTATCTAGAGAGTTACACGCCAC 60.261 50.000 0.00 0.00 31.82 5.01
4036 4189 3.881688 GGTATCTAGAGAGTTACACGCCA 59.118 47.826 0.00 0.00 31.82 5.69
4037 4190 3.252944 GGGTATCTAGAGAGTTACACGCC 59.747 52.174 0.00 0.00 31.82 5.68
4038 4191 3.252944 GGGGTATCTAGAGAGTTACACGC 59.747 52.174 0.00 0.00 33.63 5.34
4039 4192 3.497640 CGGGGTATCTAGAGAGTTACACG 59.502 52.174 0.00 1.59 33.63 4.49
4040 4193 4.275443 CACGGGGTATCTAGAGAGTTACAC 59.725 50.000 0.00 0.00 32.51 2.90
4041 4194 4.458397 CACGGGGTATCTAGAGAGTTACA 58.542 47.826 0.00 0.00 31.82 2.41
4042 4195 3.252944 GCACGGGGTATCTAGAGAGTTAC 59.747 52.174 0.00 0.00 0.00 2.50
4043 4196 3.484407 GCACGGGGTATCTAGAGAGTTA 58.516 50.000 0.00 0.00 0.00 2.24
4044 4197 2.308690 GCACGGGGTATCTAGAGAGTT 58.691 52.381 0.00 0.00 0.00 3.01
4045 4198 1.814634 CGCACGGGGTATCTAGAGAGT 60.815 57.143 0.00 0.00 0.00 3.24
4046 4199 0.875728 CGCACGGGGTATCTAGAGAG 59.124 60.000 0.00 0.00 0.00 3.20
4047 4200 1.170919 GCGCACGGGGTATCTAGAGA 61.171 60.000 0.30 0.00 0.00 3.10
4048 4201 1.286260 GCGCACGGGGTATCTAGAG 59.714 63.158 0.30 0.00 0.00 2.43
4049 4202 0.826256 ATGCGCACGGGGTATCTAGA 60.826 55.000 14.90 0.00 0.00 2.43
4050 4203 0.667487 CATGCGCACGGGGTATCTAG 60.667 60.000 14.90 0.00 0.00 2.43
4051 4204 1.365999 CATGCGCACGGGGTATCTA 59.634 57.895 14.90 0.00 0.00 1.98
4052 4205 2.108976 CATGCGCACGGGGTATCT 59.891 61.111 14.90 0.00 0.00 1.98
4053 4206 2.972505 CCATGCGCACGGGGTATC 60.973 66.667 16.30 0.00 0.00 2.24
4065 4218 2.124570 ATGTCCAGGACGCCATGC 60.125 61.111 15.24 0.00 34.95 4.06
4066 4219 1.524621 GGATGTCCAGGACGCCATG 60.525 63.158 21.13 0.00 34.95 3.66
4067 4220 2.911143 GGATGTCCAGGACGCCAT 59.089 61.111 21.13 8.32 34.95 4.40
4068 4221 3.770040 CGGATGTCCAGGACGCCA 61.770 66.667 24.01 6.43 34.95 5.69
4069 4222 3.771160 ACGGATGTCCAGGACGCC 61.771 66.667 15.24 16.62 34.95 5.68
4070 4223 2.509336 CACGGATGTCCAGGACGC 60.509 66.667 15.24 9.25 34.95 5.19
4071 4224 2.509336 GCACGGATGTCCAGGACG 60.509 66.667 15.24 5.37 34.95 4.79
4072 4225 1.741770 GTGCACGGATGTCCAGGAC 60.742 63.158 13.35 13.35 35.14 3.85
4073 4226 2.213513 TGTGCACGGATGTCCAGGA 61.214 57.895 13.13 0.00 35.14 3.86
4074 4227 2.034879 GTGTGCACGGATGTCCAGG 61.035 63.158 13.13 0.00 35.14 4.45
4075 4228 3.566261 GTGTGCACGGATGTCCAG 58.434 61.111 13.13 0.00 35.14 3.86
4087 4240 4.887190 AACCACCACCCCGTGTGC 62.887 66.667 0.00 0.00 44.01 4.57
4088 4241 2.124067 AAACCACCACCCCGTGTG 60.124 61.111 0.00 0.00 45.01 3.82
4089 4242 1.928714 AAGAAACCACCACCCCGTGT 61.929 55.000 0.00 0.00 31.47 4.49
4090 4243 1.152839 AAGAAACCACCACCCCGTG 60.153 57.895 0.00 0.00 0.00 4.94
4091 4244 1.149854 GAAGAAACCACCACCCCGT 59.850 57.895 0.00 0.00 0.00 5.28
4092 4245 0.179001 AAGAAGAAACCACCACCCCG 60.179 55.000 0.00 0.00 0.00 5.73
4093 4246 1.686587 CAAAGAAGAAACCACCACCCC 59.313 52.381 0.00 0.00 0.00 4.95
4094 4247 2.361119 GTCAAAGAAGAAACCACCACCC 59.639 50.000 0.00 0.00 0.00 4.61
4095 4248 3.020984 TGTCAAAGAAGAAACCACCACC 58.979 45.455 0.00 0.00 0.00 4.61
4096 4249 3.181490 GGTGTCAAAGAAGAAACCACCAC 60.181 47.826 0.00 0.00 44.02 4.16
4097 4250 3.020984 GGTGTCAAAGAAGAAACCACCA 58.979 45.455 0.00 0.00 44.02 4.17
4098 4251 2.361119 GGGTGTCAAAGAAGAAACCACC 59.639 50.000 5.73 0.00 46.00 4.61
4099 4252 2.361119 GGGGTGTCAAAGAAGAAACCAC 59.639 50.000 5.73 0.00 46.00 4.16
4100 4253 2.024846 TGGGGTGTCAAAGAAGAAACCA 60.025 45.455 5.73 0.00 46.00 3.67
4101 4254 2.361119 GTGGGGTGTCAAAGAAGAAACC 59.639 50.000 0.00 0.00 43.89 3.27
4102 4255 2.032924 CGTGGGGTGTCAAAGAAGAAAC 59.967 50.000 0.00 0.00 0.00 2.78
4103 4256 2.294074 CGTGGGGTGTCAAAGAAGAAA 58.706 47.619 0.00 0.00 0.00 2.52
4104 4257 1.210967 ACGTGGGGTGTCAAAGAAGAA 59.789 47.619 0.00 0.00 0.00 2.52
4105 4258 0.834612 ACGTGGGGTGTCAAAGAAGA 59.165 50.000 0.00 0.00 0.00 2.87
4106 4259 0.944386 CACGTGGGGTGTCAAAGAAG 59.056 55.000 7.95 0.00 41.89 2.85
4107 4260 3.088259 CACGTGGGGTGTCAAAGAA 57.912 52.632 7.95 0.00 41.89 2.52
4108 4261 4.868026 CACGTGGGGTGTCAAAGA 57.132 55.556 7.95 0.00 41.89 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.