Multiple sequence alignment - TraesCS7A01G231300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G231300 chr7A 100.000 2276 0 0 1 2276 202291169 202288894 0.000000e+00 4204
1 TraesCS7A01G231300 chr7A 93.103 87 6 0 1934 2020 105362137 105362223 6.600000e-26 128
2 TraesCS7A01G231300 chr7D 92.017 1378 42 18 937 2276 192671101 192669754 0.000000e+00 1873
3 TraesCS7A01G231300 chr7D 87.940 199 14 7 489 684 192671728 192671537 2.270000e-55 226
4 TraesCS7A01G231300 chr7D 93.103 87 6 0 1934 2020 101615705 101615791 6.600000e-26 128
5 TraesCS7A01G231300 chr7B 89.841 1506 73 23 482 1937 155737723 155736248 0.000000e+00 1860
6 TraesCS7A01G231300 chr7B 98.062 258 5 0 2019 2276 155736249 155735992 1.240000e-122 449
7 TraesCS7A01G231300 chr7B 96.471 85 3 0 1936 2020 60366563 60366479 8.480000e-30 141
8 TraesCS7A01G231300 chr5D 97.638 127 3 0 1 127 447940944 447940818 3.810000e-53 219
9 TraesCS7A01G231300 chr6B 92.241 116 9 0 15 130 172024077 172023962 5.030000e-37 165
10 TraesCS7A01G231300 chr4B 92.929 99 7 0 27 125 644571988 644572086 6.550000e-31 145
11 TraesCS7A01G231300 chr4B 95.455 88 4 0 1933 2020 59873732 59873819 8.480000e-30 141
12 TraesCS7A01G231300 chr5B 93.478 92 6 0 1929 2020 457129112 457129203 1.100000e-28 137
13 TraesCS7A01G231300 chr3A 91.837 98 7 1 1933 2030 696373520 696373424 3.940000e-28 135
14 TraesCS7A01G231300 chr3A 93.103 87 6 0 1934 2020 663575324 663575410 6.600000e-26 128
15 TraesCS7A01G231300 chr1B 93.258 89 6 0 1936 2024 549520144 549520056 5.100000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G231300 chr7A 202288894 202291169 2275 True 4204.0 4204 100.0000 1 2276 1 chr7A.!!$R1 2275
1 TraesCS7A01G231300 chr7D 192669754 192671728 1974 True 1049.5 1873 89.9785 489 2276 2 chr7D.!!$R1 1787
2 TraesCS7A01G231300 chr7B 155735992 155737723 1731 True 1154.5 1860 93.9515 482 2276 2 chr7B.!!$R2 1794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 319 0.035630 GTTCCATGTCTGCTCTGCCT 60.036 55.0 0.0 0.0 0.0 4.75 F
1115 1304 0.036448 CGCGATCCCTCCTCTACCTA 59.964 60.0 0.0 0.0 0.0 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1209 1398 0.976641 AGATCCAGAACACCTGCGAA 59.023 50.000 0.0 0.0 41.57 4.70 R
2009 2221 3.054802 AGGACTGCATTTTACTCCCTCTG 60.055 47.826 0.0 0.0 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.472695 TGAAGGGAAGATGGAACGTG 57.527 50.000 0.00 0.00 0.00 4.49
20 21 1.003118 TGAAGGGAAGATGGAACGTGG 59.997 52.381 0.00 0.00 0.00 4.94
21 22 0.328258 AAGGGAAGATGGAACGTGGG 59.672 55.000 0.00 0.00 0.00 4.61
22 23 0.840722 AGGGAAGATGGAACGTGGGT 60.841 55.000 0.00 0.00 0.00 4.51
23 24 0.037734 GGGAAGATGGAACGTGGGTT 59.962 55.000 0.00 0.00 39.63 4.11
24 25 1.546998 GGGAAGATGGAACGTGGGTTT 60.547 52.381 0.00 0.00 36.24 3.27
25 26 2.290450 GGGAAGATGGAACGTGGGTTTA 60.290 50.000 0.00 0.00 36.24 2.01
26 27 3.617284 GGAAGATGGAACGTGGGTTTAT 58.383 45.455 0.00 0.00 36.24 1.40
27 28 4.384427 GGGAAGATGGAACGTGGGTTTATA 60.384 45.833 0.00 0.00 36.24 0.98
28 29 5.374071 GGAAGATGGAACGTGGGTTTATAT 58.626 41.667 0.00 0.00 36.24 0.86
29 30 6.464749 GGGAAGATGGAACGTGGGTTTATATA 60.465 42.308 0.00 0.00 36.24 0.86
30 31 6.649557 GGAAGATGGAACGTGGGTTTATATAG 59.350 42.308 0.00 0.00 36.24 1.31
31 32 5.548406 AGATGGAACGTGGGTTTATATAGC 58.452 41.667 0.00 0.00 36.24 2.97
32 33 4.075963 TGGAACGTGGGTTTATATAGCC 57.924 45.455 4.61 4.61 36.24 3.93
33 34 3.181452 TGGAACGTGGGTTTATATAGCCC 60.181 47.826 14.33 14.33 42.64 5.19
42 43 6.635030 GGGTTTATATAGCCCAAACAGAAG 57.365 41.667 15.65 0.00 41.93 2.85
43 44 6.127101 GGGTTTATATAGCCCAAACAGAAGT 58.873 40.000 15.65 0.00 41.93 3.01
44 45 6.262496 GGGTTTATATAGCCCAAACAGAAGTC 59.738 42.308 15.65 0.00 41.93 3.01
45 46 6.018180 GGTTTATATAGCCCAAACAGAAGTCG 60.018 42.308 0.00 0.00 34.55 4.18
46 47 4.755266 ATATAGCCCAAACAGAAGTCGT 57.245 40.909 0.00 0.00 0.00 4.34
47 48 2.922740 TAGCCCAAACAGAAGTCGTT 57.077 45.000 0.00 0.00 0.00 3.85
48 49 1.308998 AGCCCAAACAGAAGTCGTTG 58.691 50.000 0.00 0.00 0.00 4.10
49 50 0.310854 GCCCAAACAGAAGTCGTTGG 59.689 55.000 0.00 0.00 0.00 3.77
50 51 1.961793 CCCAAACAGAAGTCGTTGGA 58.038 50.000 2.87 0.00 0.00 3.53
51 52 2.504367 CCCAAACAGAAGTCGTTGGAT 58.496 47.619 2.87 0.00 0.00 3.41
52 53 2.226437 CCCAAACAGAAGTCGTTGGATG 59.774 50.000 2.87 0.00 0.00 3.51
53 54 2.350772 CCAAACAGAAGTCGTTGGATGC 60.351 50.000 0.00 0.00 0.00 3.91
54 55 2.254546 AACAGAAGTCGTTGGATGCA 57.745 45.000 0.00 0.00 0.00 3.96
55 56 2.479566 ACAGAAGTCGTTGGATGCAT 57.520 45.000 0.00 0.00 0.00 3.96
56 57 2.079158 ACAGAAGTCGTTGGATGCATG 58.921 47.619 2.46 0.00 0.00 4.06
57 58 1.399440 CAGAAGTCGTTGGATGCATGG 59.601 52.381 2.46 0.00 0.00 3.66
58 59 0.099436 GAAGTCGTTGGATGCATGGC 59.901 55.000 2.46 0.00 0.00 4.40
59 60 0.322816 AAGTCGTTGGATGCATGGCT 60.323 50.000 2.46 0.00 0.00 4.75
60 61 0.745845 AGTCGTTGGATGCATGGCTC 60.746 55.000 2.46 0.00 0.00 4.70
61 62 0.745845 GTCGTTGGATGCATGGCTCT 60.746 55.000 2.46 0.00 0.00 4.09
62 63 0.462581 TCGTTGGATGCATGGCTCTC 60.463 55.000 2.46 0.00 0.00 3.20
63 64 0.745486 CGTTGGATGCATGGCTCTCA 60.745 55.000 2.46 0.00 0.00 3.27
64 65 1.688772 GTTGGATGCATGGCTCTCAT 58.311 50.000 2.46 0.00 36.31 2.90
65 66 1.607628 GTTGGATGCATGGCTCTCATC 59.392 52.381 2.46 0.00 36.71 2.92
66 67 1.137697 TGGATGCATGGCTCTCATCT 58.862 50.000 2.46 0.00 37.38 2.90
67 68 2.332117 TGGATGCATGGCTCTCATCTA 58.668 47.619 2.46 2.31 37.38 1.98
68 69 2.707257 TGGATGCATGGCTCTCATCTAA 59.293 45.455 2.46 0.00 37.38 2.10
69 70 3.072944 GGATGCATGGCTCTCATCTAAC 58.927 50.000 2.46 0.00 37.38 2.34
70 71 2.229675 TGCATGGCTCTCATCTAACG 57.770 50.000 0.00 0.00 32.92 3.18
71 72 1.202568 TGCATGGCTCTCATCTAACGG 60.203 52.381 0.00 0.00 32.92 4.44
72 73 1.506493 CATGGCTCTCATCTAACGGC 58.494 55.000 0.00 0.00 32.92 5.68
73 74 0.394565 ATGGCTCTCATCTAACGGCC 59.605 55.000 0.00 0.00 39.93 6.13
74 75 1.300233 GGCTCTCATCTAACGGCCG 60.300 63.158 26.86 26.86 0.00 6.13
75 76 1.300233 GCTCTCATCTAACGGCCGG 60.300 63.158 31.76 12.37 0.00 6.13
76 77 1.364171 CTCTCATCTAACGGCCGGG 59.636 63.158 31.76 18.81 0.00 5.73
77 78 2.280186 CTCATCTAACGGCCGGGC 60.280 66.667 31.76 20.04 0.00 6.13
78 79 4.215742 TCATCTAACGGCCGGGCG 62.216 66.667 44.20 44.20 0.00 6.13
82 83 4.944372 CTAACGGCCGGGCGCTAG 62.944 72.222 45.47 40.40 37.74 3.42
88 89 4.874977 GCCGGGCGCTAGTCTGAC 62.875 72.222 7.64 0.00 0.00 3.51
89 90 3.449227 CCGGGCGCTAGTCTGACA 61.449 66.667 7.64 0.00 0.00 3.58
90 91 2.571757 CGGGCGCTAGTCTGACAA 59.428 61.111 7.64 0.00 0.00 3.18
91 92 1.141881 CGGGCGCTAGTCTGACAAT 59.858 57.895 7.64 0.00 0.00 2.71
92 93 0.460284 CGGGCGCTAGTCTGACAATT 60.460 55.000 7.64 0.00 0.00 2.32
93 94 1.739067 GGGCGCTAGTCTGACAATTT 58.261 50.000 7.64 0.00 0.00 1.82
94 95 2.084546 GGGCGCTAGTCTGACAATTTT 58.915 47.619 7.64 0.00 0.00 1.82
95 96 2.096013 GGGCGCTAGTCTGACAATTTTC 59.904 50.000 7.64 0.00 0.00 2.29
96 97 3.003480 GGCGCTAGTCTGACAATTTTCT 58.997 45.455 7.64 0.00 0.00 2.52
97 98 4.181578 GGCGCTAGTCTGACAATTTTCTA 58.818 43.478 7.64 0.00 0.00 2.10
98 99 4.268884 GGCGCTAGTCTGACAATTTTCTAG 59.731 45.833 7.64 2.45 0.00 2.43
99 100 4.268884 GCGCTAGTCTGACAATTTTCTAGG 59.731 45.833 10.88 0.00 0.00 3.02
100 101 5.651530 CGCTAGTCTGACAATTTTCTAGGA 58.348 41.667 10.88 0.00 0.00 2.94
101 102 6.276847 CGCTAGTCTGACAATTTTCTAGGAT 58.723 40.000 10.88 0.00 0.00 3.24
102 103 6.419413 CGCTAGTCTGACAATTTTCTAGGATC 59.581 42.308 10.88 0.00 0.00 3.36
103 104 7.268586 GCTAGTCTGACAATTTTCTAGGATCA 58.731 38.462 10.88 0.00 0.00 2.92
104 105 7.437862 GCTAGTCTGACAATTTTCTAGGATCAG 59.562 40.741 10.88 0.00 34.68 2.90
105 106 7.487822 AGTCTGACAATTTTCTAGGATCAGA 57.512 36.000 10.88 0.00 38.94 3.27
107 108 7.487822 TCTGACAATTTTCTAGGATCAGACT 57.512 36.000 0.00 0.00 36.94 3.24
108 109 7.911651 TCTGACAATTTTCTAGGATCAGACTT 58.088 34.615 0.00 0.00 36.94 3.01
109 110 8.037758 TCTGACAATTTTCTAGGATCAGACTTC 58.962 37.037 0.00 0.00 36.94 3.01
110 111 7.911651 TGACAATTTTCTAGGATCAGACTTCT 58.088 34.615 0.00 0.00 0.00 2.85
111 112 7.821359 TGACAATTTTCTAGGATCAGACTTCTG 59.179 37.037 0.00 0.00 45.08 3.02
121 122 2.593346 CAGACTTCTGATCGGAAGGG 57.407 55.000 36.14 25.11 46.59 3.95
122 123 1.827969 CAGACTTCTGATCGGAAGGGT 59.172 52.381 36.14 24.72 46.59 4.34
123 124 2.234908 CAGACTTCTGATCGGAAGGGTT 59.765 50.000 36.14 22.41 46.59 4.11
124 125 2.907042 AGACTTCTGATCGGAAGGGTTT 59.093 45.455 36.14 22.10 44.82 3.27
125 126 3.055747 AGACTTCTGATCGGAAGGGTTTC 60.056 47.826 36.14 27.06 44.82 2.78
142 143 6.216801 GGGTTTCCCAAGATTTATACCAAC 57.783 41.667 0.00 0.00 44.65 3.77
143 144 5.128171 GGGTTTCCCAAGATTTATACCAACC 59.872 44.000 0.00 0.00 44.65 3.77
144 145 5.163591 GGTTTCCCAAGATTTATACCAACCG 60.164 44.000 0.00 0.00 0.00 4.44
145 146 4.847990 TCCCAAGATTTATACCAACCGT 57.152 40.909 0.00 0.00 0.00 4.83
146 147 4.519213 TCCCAAGATTTATACCAACCGTG 58.481 43.478 0.00 0.00 0.00 4.94
147 148 4.225492 TCCCAAGATTTATACCAACCGTGA 59.775 41.667 0.00 0.00 0.00 4.35
148 149 4.574828 CCCAAGATTTATACCAACCGTGAG 59.425 45.833 0.00 0.00 0.00 3.51
149 150 5.183228 CCAAGATTTATACCAACCGTGAGT 58.817 41.667 0.00 0.00 0.00 3.41
150 151 6.342906 CCAAGATTTATACCAACCGTGAGTA 58.657 40.000 0.00 0.00 0.00 2.59
151 152 6.479001 CCAAGATTTATACCAACCGTGAGTAG 59.521 42.308 0.00 0.00 0.00 2.57
152 153 6.158023 AGATTTATACCAACCGTGAGTAGG 57.842 41.667 0.00 0.00 0.00 3.18
153 154 3.806625 TTATACCAACCGTGAGTAGGC 57.193 47.619 0.00 0.00 0.00 3.93
154 155 0.458669 ATACCAACCGTGAGTAGGCG 59.541 55.000 0.00 0.00 0.00 5.52
160 161 3.906718 CGTGAGTAGGCGGAGAGT 58.093 61.111 0.00 0.00 0.00 3.24
161 162 3.076104 CGTGAGTAGGCGGAGAGTA 57.924 57.895 0.00 0.00 0.00 2.59
162 163 0.656785 CGTGAGTAGGCGGAGAGTAC 59.343 60.000 0.00 0.00 0.00 2.73
163 164 1.747709 GTGAGTAGGCGGAGAGTACA 58.252 55.000 0.00 0.00 0.00 2.90
164 165 2.299521 GTGAGTAGGCGGAGAGTACAT 58.700 52.381 0.00 0.00 0.00 2.29
165 166 3.474600 GTGAGTAGGCGGAGAGTACATA 58.525 50.000 0.00 0.00 0.00 2.29
166 167 3.881688 GTGAGTAGGCGGAGAGTACATAA 59.118 47.826 0.00 0.00 0.00 1.90
167 168 4.337555 GTGAGTAGGCGGAGAGTACATAAA 59.662 45.833 0.00 0.00 0.00 1.40
168 169 4.337555 TGAGTAGGCGGAGAGTACATAAAC 59.662 45.833 0.00 0.00 0.00 2.01
169 170 4.534797 AGTAGGCGGAGAGTACATAAACT 58.465 43.478 0.00 0.00 0.00 2.66
170 171 4.954826 AGTAGGCGGAGAGTACATAAACTT 59.045 41.667 0.00 0.00 0.00 2.66
171 172 4.820894 AGGCGGAGAGTACATAAACTTT 57.179 40.909 0.00 0.00 0.00 2.66
172 173 4.504858 AGGCGGAGAGTACATAAACTTTG 58.495 43.478 0.00 0.00 0.00 2.77
173 174 3.063588 GGCGGAGAGTACATAAACTTTGC 59.936 47.826 0.00 0.00 0.00 3.68
174 175 3.063588 GCGGAGAGTACATAAACTTTGCC 59.936 47.826 0.00 0.00 0.00 4.52
175 176 4.250464 CGGAGAGTACATAAACTTTGCCA 58.750 43.478 0.00 0.00 0.00 4.92
176 177 4.876107 CGGAGAGTACATAAACTTTGCCAT 59.124 41.667 0.00 0.00 0.00 4.40
177 178 6.046593 CGGAGAGTACATAAACTTTGCCATA 58.953 40.000 0.00 0.00 0.00 2.74
178 179 6.706270 CGGAGAGTACATAAACTTTGCCATAT 59.294 38.462 0.00 0.00 0.00 1.78
179 180 7.307396 CGGAGAGTACATAAACTTTGCCATATG 60.307 40.741 0.00 0.00 33.12 1.78
180 181 7.715249 GGAGAGTACATAAACTTTGCCATATGA 59.285 37.037 3.65 0.00 31.71 2.15
181 182 9.277783 GAGAGTACATAAACTTTGCCATATGAT 57.722 33.333 3.65 0.00 31.71 2.45
182 183 9.060347 AGAGTACATAAACTTTGCCATATGATG 57.940 33.333 3.65 0.00 31.71 3.07
183 184 8.752005 AGTACATAAACTTTGCCATATGATGT 57.248 30.769 3.65 5.32 31.71 3.06
184 185 8.623903 AGTACATAAACTTTGCCATATGATGTG 58.376 33.333 3.65 0.00 31.71 3.21
185 186 6.808829 ACATAAACTTTGCCATATGATGTGG 58.191 36.000 3.65 3.58 39.80 4.17
186 187 4.741321 AAACTTTGCCATATGATGTGGG 57.259 40.909 10.33 0.00 37.22 4.61
187 188 3.668141 ACTTTGCCATATGATGTGGGA 57.332 42.857 10.33 4.14 37.22 4.37
188 189 3.559069 ACTTTGCCATATGATGTGGGAG 58.441 45.455 10.33 0.00 38.37 4.30
189 190 3.053395 ACTTTGCCATATGATGTGGGAGT 60.053 43.478 10.33 0.00 38.37 3.85
190 191 4.165950 ACTTTGCCATATGATGTGGGAGTA 59.834 41.667 10.33 0.00 38.37 2.59
191 192 4.999469 TTGCCATATGATGTGGGAGTAT 57.001 40.909 10.33 0.00 38.37 2.12
192 193 6.044287 ACTTTGCCATATGATGTGGGAGTATA 59.956 38.462 10.33 0.00 38.37 1.47
193 194 6.641161 TTGCCATATGATGTGGGAGTATAT 57.359 37.500 10.33 0.00 38.37 0.86
194 195 7.747809 TTGCCATATGATGTGGGAGTATATA 57.252 36.000 10.33 0.00 38.37 0.86
195 196 7.747809 TGCCATATGATGTGGGAGTATATAA 57.252 36.000 10.33 0.00 37.22 0.98
196 197 8.156822 TGCCATATGATGTGGGAGTATATAAA 57.843 34.615 10.33 0.00 37.22 1.40
197 198 8.046708 TGCCATATGATGTGGGAGTATATAAAC 58.953 37.037 10.33 0.00 37.22 2.01
198 199 8.046708 GCCATATGATGTGGGAGTATATAAACA 58.953 37.037 10.33 0.00 37.22 2.83
199 200 9.958180 CCATATGATGTGGGAGTATATAAACAA 57.042 33.333 3.65 0.00 32.98 2.83
203 204 9.730705 ATGATGTGGGAGTATATAAACAATGAG 57.269 33.333 0.00 0.00 0.00 2.90
204 205 8.933653 TGATGTGGGAGTATATAAACAATGAGA 58.066 33.333 0.00 0.00 0.00 3.27
205 206 9.950496 GATGTGGGAGTATATAAACAATGAGAT 57.050 33.333 0.00 0.00 0.00 2.75
208 209 9.355215 GTGGGAGTATATAAACAATGAGATACG 57.645 37.037 0.00 0.00 0.00 3.06
209 210 9.085645 TGGGAGTATATAAACAATGAGATACGT 57.914 33.333 0.00 0.00 0.00 3.57
210 211 9.924650 GGGAGTATATAAACAATGAGATACGTT 57.075 33.333 0.00 0.00 0.00 3.99
221 222 7.443218 CAATGAGATACGTTGTCTTGTCTAG 57.557 40.000 0.00 0.00 39.75 2.43
222 223 7.251281 CAATGAGATACGTTGTCTTGTCTAGA 58.749 38.462 0.00 0.00 39.75 2.43
223 224 6.812879 TGAGATACGTTGTCTTGTCTAGAA 57.187 37.500 0.00 0.00 33.81 2.10
224 225 7.392494 TGAGATACGTTGTCTTGTCTAGAAT 57.608 36.000 0.00 0.00 33.81 2.40
225 226 7.251281 TGAGATACGTTGTCTTGTCTAGAATG 58.749 38.462 0.00 0.00 33.81 2.67
226 227 7.094334 TGAGATACGTTGTCTTGTCTAGAATGT 60.094 37.037 0.00 0.00 33.81 2.71
227 228 7.603651 AGATACGTTGTCTTGTCTAGAATGTT 58.396 34.615 0.00 0.00 33.81 2.71
228 229 8.737175 AGATACGTTGTCTTGTCTAGAATGTTA 58.263 33.333 0.00 0.00 33.81 2.41
229 230 8.684973 ATACGTTGTCTTGTCTAGAATGTTAC 57.315 34.615 0.00 0.00 33.81 2.50
230 231 6.746120 ACGTTGTCTTGTCTAGAATGTTACT 58.254 36.000 0.00 0.00 33.81 2.24
231 232 7.879070 ACGTTGTCTTGTCTAGAATGTTACTA 58.121 34.615 0.00 0.00 33.81 1.82
232 233 8.355169 ACGTTGTCTTGTCTAGAATGTTACTAA 58.645 33.333 0.00 0.00 33.81 2.24
233 234 9.355215 CGTTGTCTTGTCTAGAATGTTACTAAT 57.645 33.333 0.00 0.00 33.81 1.73
293 294 7.153217 AGCAACATAAATACTTTGTACACCC 57.847 36.000 0.00 0.00 0.00 4.61
294 295 6.717540 AGCAACATAAATACTTTGTACACCCA 59.282 34.615 0.00 0.00 0.00 4.51
295 296 6.804783 GCAACATAAATACTTTGTACACCCAC 59.195 38.462 0.00 0.00 0.00 4.61
296 297 7.309920 CAACATAAATACTTTGTACACCCACC 58.690 38.462 0.00 0.00 0.00 4.61
297 298 6.544650 ACATAAATACTTTGTACACCCACCA 58.455 36.000 0.00 0.00 0.00 4.17
298 299 7.179269 ACATAAATACTTTGTACACCCACCAT 58.821 34.615 0.00 0.00 0.00 3.55
299 300 5.975693 AAATACTTTGTACACCCACCATG 57.024 39.130 0.00 0.00 0.00 3.66
300 301 4.650972 ATACTTTGTACACCCACCATGT 57.349 40.909 0.00 0.00 0.00 3.21
301 302 3.306472 ACTTTGTACACCCACCATGTT 57.694 42.857 0.00 0.00 0.00 2.71
302 303 3.219281 ACTTTGTACACCCACCATGTTC 58.781 45.455 0.00 0.00 0.00 3.18
303 304 2.279935 TTGTACACCCACCATGTTCC 57.720 50.000 0.00 0.00 0.00 3.62
304 305 1.141185 TGTACACCCACCATGTTCCA 58.859 50.000 0.00 0.00 0.00 3.53
305 306 1.707989 TGTACACCCACCATGTTCCAT 59.292 47.619 0.00 0.00 0.00 3.41
306 307 2.091541 GTACACCCACCATGTTCCATG 58.908 52.381 0.00 0.00 0.00 3.66
307 308 0.482446 ACACCCACCATGTTCCATGT 59.518 50.000 3.75 0.00 0.00 3.21
308 309 1.176527 CACCCACCATGTTCCATGTC 58.823 55.000 3.75 0.00 0.00 3.06
309 310 1.075601 ACCCACCATGTTCCATGTCT 58.924 50.000 3.75 0.00 0.00 3.41
310 311 1.272092 ACCCACCATGTTCCATGTCTG 60.272 52.381 3.75 0.00 0.00 3.51
311 312 0.813184 CCACCATGTTCCATGTCTGC 59.187 55.000 3.75 0.00 0.00 4.26
312 313 1.615116 CCACCATGTTCCATGTCTGCT 60.615 52.381 3.75 0.00 0.00 4.24
313 314 1.741706 CACCATGTTCCATGTCTGCTC 59.258 52.381 3.75 0.00 0.00 4.26
314 315 1.632409 ACCATGTTCCATGTCTGCTCT 59.368 47.619 3.75 0.00 0.00 4.09
315 316 2.014857 CCATGTTCCATGTCTGCTCTG 58.985 52.381 3.75 0.00 0.00 3.35
316 317 1.400846 CATGTTCCATGTCTGCTCTGC 59.599 52.381 0.00 0.00 0.00 4.26
317 318 0.321919 TGTTCCATGTCTGCTCTGCC 60.322 55.000 0.00 0.00 0.00 4.85
318 319 0.035630 GTTCCATGTCTGCTCTGCCT 60.036 55.000 0.00 0.00 0.00 4.75
319 320 0.251354 TTCCATGTCTGCTCTGCCTC 59.749 55.000 0.00 0.00 0.00 4.70
320 321 0.906282 TCCATGTCTGCTCTGCCTCA 60.906 55.000 0.00 0.00 0.00 3.86
321 322 0.743701 CCATGTCTGCTCTGCCTCAC 60.744 60.000 0.00 0.00 0.00 3.51
322 323 0.036671 CATGTCTGCTCTGCCTCACA 60.037 55.000 0.00 0.00 0.00 3.58
323 324 0.689055 ATGTCTGCTCTGCCTCACAA 59.311 50.000 0.00 0.00 0.00 3.33
324 325 0.250038 TGTCTGCTCTGCCTCACAAC 60.250 55.000 0.00 0.00 0.00 3.32
325 326 1.005748 TCTGCTCTGCCTCACAACG 60.006 57.895 0.00 0.00 0.00 4.10
326 327 1.301244 CTGCTCTGCCTCACAACGT 60.301 57.895 0.00 0.00 0.00 3.99
327 328 0.038251 CTGCTCTGCCTCACAACGTA 60.038 55.000 0.00 0.00 0.00 3.57
328 329 0.038251 TGCTCTGCCTCACAACGTAG 60.038 55.000 0.00 0.00 0.00 3.51
329 330 0.737715 GCTCTGCCTCACAACGTAGG 60.738 60.000 0.00 0.00 35.86 3.18
336 337 3.802948 CCTCACAACGTAGGCTAGATT 57.197 47.619 0.00 0.00 0.00 2.40
337 338 3.448686 CCTCACAACGTAGGCTAGATTG 58.551 50.000 13.55 13.55 0.00 2.67
338 339 3.130516 CCTCACAACGTAGGCTAGATTGA 59.869 47.826 19.46 7.55 0.00 2.57
339 340 4.381612 CCTCACAACGTAGGCTAGATTGAA 60.382 45.833 19.46 9.52 0.00 2.69
340 341 4.491676 TCACAACGTAGGCTAGATTGAAC 58.508 43.478 19.46 0.00 0.00 3.18
341 342 4.219944 TCACAACGTAGGCTAGATTGAACT 59.780 41.667 19.46 0.84 0.00 3.01
342 343 4.327357 CACAACGTAGGCTAGATTGAACTG 59.673 45.833 19.46 7.96 0.00 3.16
343 344 3.166489 ACGTAGGCTAGATTGAACTGC 57.834 47.619 0.00 0.00 0.00 4.40
344 345 2.496070 ACGTAGGCTAGATTGAACTGCA 59.504 45.455 0.00 0.00 0.00 4.41
345 346 3.133003 ACGTAGGCTAGATTGAACTGCAT 59.867 43.478 0.00 0.00 0.00 3.96
346 347 3.492383 CGTAGGCTAGATTGAACTGCATG 59.508 47.826 0.00 0.00 0.00 4.06
347 348 3.641434 AGGCTAGATTGAACTGCATGT 57.359 42.857 0.00 0.00 0.00 3.21
348 349 4.760530 AGGCTAGATTGAACTGCATGTA 57.239 40.909 0.00 0.00 0.00 2.29
349 350 5.301835 AGGCTAGATTGAACTGCATGTAT 57.698 39.130 0.00 0.00 0.00 2.29
350 351 5.303971 AGGCTAGATTGAACTGCATGTATC 58.696 41.667 0.00 0.00 0.00 2.24
351 352 5.059161 GGCTAGATTGAACTGCATGTATCA 58.941 41.667 0.00 0.00 0.00 2.15
352 353 5.704515 GGCTAGATTGAACTGCATGTATCAT 59.295 40.000 0.00 0.00 0.00 2.45
353 354 6.128336 GGCTAGATTGAACTGCATGTATCATC 60.128 42.308 0.00 0.00 0.00 2.92
354 355 5.919272 AGATTGAACTGCATGTATCATCG 57.081 39.130 0.00 0.00 0.00 3.84
355 356 3.950087 TTGAACTGCATGTATCATCGC 57.050 42.857 0.00 0.00 0.00 4.58
356 357 3.183793 TGAACTGCATGTATCATCGCT 57.816 42.857 0.00 0.00 0.00 4.93
357 358 4.320608 TGAACTGCATGTATCATCGCTA 57.679 40.909 0.00 0.00 0.00 4.26
358 359 4.051237 TGAACTGCATGTATCATCGCTAC 58.949 43.478 0.00 0.00 0.00 3.58
359 360 3.733443 ACTGCATGTATCATCGCTACA 57.267 42.857 0.00 0.00 33.86 2.74
360 361 4.263018 ACTGCATGTATCATCGCTACAT 57.737 40.909 0.00 0.00 39.74 2.29
361 362 5.391312 ACTGCATGTATCATCGCTACATA 57.609 39.130 0.00 0.00 37.64 2.29
362 363 5.164233 ACTGCATGTATCATCGCTACATAC 58.836 41.667 0.00 0.00 37.64 2.39
363 364 4.494484 TGCATGTATCATCGCTACATACC 58.506 43.478 0.00 0.00 37.64 2.73
364 365 3.865745 GCATGTATCATCGCTACATACCC 59.134 47.826 0.00 0.00 37.64 3.69
365 366 4.382040 GCATGTATCATCGCTACATACCCT 60.382 45.833 0.00 0.00 37.64 4.34
366 367 5.724328 CATGTATCATCGCTACATACCCTT 58.276 41.667 0.00 0.00 37.64 3.95
367 368 5.801531 TGTATCATCGCTACATACCCTTT 57.198 39.130 0.00 0.00 0.00 3.11
368 369 6.169557 TGTATCATCGCTACATACCCTTTT 57.830 37.500 0.00 0.00 0.00 2.27
369 370 6.588204 TGTATCATCGCTACATACCCTTTTT 58.412 36.000 0.00 0.00 0.00 1.94
370 371 6.704493 TGTATCATCGCTACATACCCTTTTTC 59.296 38.462 0.00 0.00 0.00 2.29
371 372 5.092554 TCATCGCTACATACCCTTTTTCA 57.907 39.130 0.00 0.00 0.00 2.69
372 373 5.116180 TCATCGCTACATACCCTTTTTCAG 58.884 41.667 0.00 0.00 0.00 3.02
373 374 4.811969 TCGCTACATACCCTTTTTCAGA 57.188 40.909 0.00 0.00 0.00 3.27
374 375 5.155278 TCGCTACATACCCTTTTTCAGAA 57.845 39.130 0.00 0.00 0.00 3.02
375 376 5.175859 TCGCTACATACCCTTTTTCAGAAG 58.824 41.667 0.00 0.00 0.00 2.85
376 377 5.046878 TCGCTACATACCCTTTTTCAGAAGA 60.047 40.000 0.00 0.00 0.00 2.87
377 378 5.642063 CGCTACATACCCTTTTTCAGAAGAA 59.358 40.000 0.00 0.00 0.00 2.52
378 379 6.148811 CGCTACATACCCTTTTTCAGAAGAAA 59.851 38.462 0.00 0.00 41.78 2.52
379 380 7.306213 GCTACATACCCTTTTTCAGAAGAAAC 58.694 38.462 0.00 0.00 43.09 2.78
380 381 7.175119 GCTACATACCCTTTTTCAGAAGAAACT 59.825 37.037 0.00 0.00 43.09 2.66
381 382 7.898014 ACATACCCTTTTTCAGAAGAAACTT 57.102 32.000 0.00 0.00 43.09 2.66
382 383 7.941919 ACATACCCTTTTTCAGAAGAAACTTC 58.058 34.615 0.00 0.00 43.09 3.01
383 384 5.854010 ACCCTTTTTCAGAAGAAACTTCC 57.146 39.130 7.72 0.00 43.09 3.46
384 385 5.269189 ACCCTTTTTCAGAAGAAACTTCCA 58.731 37.500 7.72 0.00 43.09 3.53
385 386 5.127194 ACCCTTTTTCAGAAGAAACTTCCAC 59.873 40.000 7.72 0.00 43.09 4.02
386 387 5.127031 CCCTTTTTCAGAAGAAACTTCCACA 59.873 40.000 7.72 0.00 43.09 4.17
387 388 6.036470 CCTTTTTCAGAAGAAACTTCCACAC 58.964 40.000 7.72 0.00 43.09 3.82
388 389 5.576447 TTTTCAGAAGAAACTTCCACACC 57.424 39.130 7.72 0.00 43.09 4.16
389 390 4.503714 TTCAGAAGAAACTTCCACACCT 57.496 40.909 7.72 0.00 0.00 4.00
390 391 5.623956 TTCAGAAGAAACTTCCACACCTA 57.376 39.130 7.72 0.00 0.00 3.08
391 392 5.623956 TCAGAAGAAACTTCCACACCTAA 57.376 39.130 7.72 0.00 0.00 2.69
392 393 5.365619 TCAGAAGAAACTTCCACACCTAAC 58.634 41.667 7.72 0.00 0.00 2.34
393 394 5.104693 TCAGAAGAAACTTCCACACCTAACA 60.105 40.000 7.72 0.00 0.00 2.41
394 395 5.588648 CAGAAGAAACTTCCACACCTAACAA 59.411 40.000 7.72 0.00 0.00 2.83
395 396 5.589050 AGAAGAAACTTCCACACCTAACAAC 59.411 40.000 7.72 0.00 0.00 3.32
396 397 3.875134 AGAAACTTCCACACCTAACAACG 59.125 43.478 0.00 0.00 0.00 4.10
397 398 1.589803 ACTTCCACACCTAACAACGC 58.410 50.000 0.00 0.00 0.00 4.84
398 399 1.134340 ACTTCCACACCTAACAACGCA 60.134 47.619 0.00 0.00 0.00 5.24
399 400 1.944024 CTTCCACACCTAACAACGCAA 59.056 47.619 0.00 0.00 0.00 4.85
400 401 2.039818 TCCACACCTAACAACGCAAA 57.960 45.000 0.00 0.00 0.00 3.68
401 402 1.671845 TCCACACCTAACAACGCAAAC 59.328 47.619 0.00 0.00 0.00 2.93
402 403 1.673920 CCACACCTAACAACGCAAACT 59.326 47.619 0.00 0.00 0.00 2.66
403 404 2.873472 CCACACCTAACAACGCAAACTA 59.127 45.455 0.00 0.00 0.00 2.24
404 405 3.059188 CCACACCTAACAACGCAAACTAG 60.059 47.826 0.00 0.00 0.00 2.57
405 406 3.805422 CACACCTAACAACGCAAACTAGA 59.195 43.478 0.00 0.00 0.00 2.43
406 407 4.271533 CACACCTAACAACGCAAACTAGAA 59.728 41.667 0.00 0.00 0.00 2.10
407 408 4.877251 ACACCTAACAACGCAAACTAGAAA 59.123 37.500 0.00 0.00 0.00 2.52
408 409 5.202640 CACCTAACAACGCAAACTAGAAAC 58.797 41.667 0.00 0.00 0.00 2.78
409 410 5.007332 CACCTAACAACGCAAACTAGAAACT 59.993 40.000 0.00 0.00 0.00 2.66
410 411 5.587443 ACCTAACAACGCAAACTAGAAACTT 59.413 36.000 0.00 0.00 0.00 2.66
411 412 5.907391 CCTAACAACGCAAACTAGAAACTTG 59.093 40.000 0.00 0.00 0.00 3.16
412 413 5.554822 AACAACGCAAACTAGAAACTTGA 57.445 34.783 0.00 0.00 0.00 3.02
413 414 5.751243 ACAACGCAAACTAGAAACTTGAT 57.249 34.783 0.00 0.00 0.00 2.57
414 415 6.131544 ACAACGCAAACTAGAAACTTGATT 57.868 33.333 0.00 0.00 0.00 2.57
415 416 6.199393 ACAACGCAAACTAGAAACTTGATTC 58.801 36.000 0.00 0.00 0.00 2.52
416 417 6.038271 ACAACGCAAACTAGAAACTTGATTCT 59.962 34.615 0.00 0.00 42.21 2.40
417 418 6.229561 ACGCAAACTAGAAACTTGATTCTC 57.770 37.500 0.00 0.00 40.13 2.87
418 419 5.758296 ACGCAAACTAGAAACTTGATTCTCA 59.242 36.000 0.00 0.00 40.13 3.27
419 420 6.260050 ACGCAAACTAGAAACTTGATTCTCAA 59.740 34.615 0.00 0.00 40.13 3.02
420 421 7.132213 CGCAAACTAGAAACTTGATTCTCAAA 58.868 34.615 0.00 0.00 40.13 2.69
421 422 7.643764 CGCAAACTAGAAACTTGATTCTCAAAA 59.356 33.333 0.00 0.00 40.13 2.44
422 423 9.301153 GCAAACTAGAAACTTGATTCTCAAAAA 57.699 29.630 0.00 0.00 40.13 1.94
456 457 9.430623 ACCAAAATTAAGATCCAAAAATTACCG 57.569 29.630 0.00 0.00 0.00 4.02
457 458 9.430623 CCAAAATTAAGATCCAAAAATTACCGT 57.569 29.630 0.00 0.00 0.00 4.83
459 460 9.990360 AAAATTAAGATCCAAAAATTACCGTGT 57.010 25.926 0.00 0.00 0.00 4.49
473 474 2.240493 CCGTGTAATGGGAGGATGAC 57.760 55.000 0.00 0.00 40.17 3.06
474 475 1.484653 CCGTGTAATGGGAGGATGACA 59.515 52.381 0.00 0.00 40.17 3.58
475 476 2.104792 CCGTGTAATGGGAGGATGACAT 59.895 50.000 0.00 0.00 40.17 3.06
476 477 3.393800 CGTGTAATGGGAGGATGACATC 58.606 50.000 6.91 6.91 0.00 3.06
477 478 3.070159 CGTGTAATGGGAGGATGACATCT 59.930 47.826 14.95 1.59 0.00 2.90
478 479 4.280929 CGTGTAATGGGAGGATGACATCTA 59.719 45.833 14.95 0.00 0.00 1.98
479 480 5.221441 CGTGTAATGGGAGGATGACATCTAA 60.221 44.000 14.95 0.00 0.00 2.10
480 481 5.992217 GTGTAATGGGAGGATGACATCTAAC 59.008 44.000 14.95 6.89 0.00 2.34
486 487 3.006323 GGAGGATGACATCTAACGCATCT 59.994 47.826 14.95 1.21 37.77 2.90
487 488 4.502259 GGAGGATGACATCTAACGCATCTT 60.502 45.833 14.95 0.00 37.77 2.40
522 526 9.764363 AACTCCCAATTACTTGATTTTTCTTTC 57.236 29.630 0.00 0.00 34.04 2.62
523 527 9.147732 ACTCCCAATTACTTGATTTTTCTTTCT 57.852 29.630 0.00 0.00 34.04 2.52
564 568 5.600908 TTTTACTCGAGAAAAACATCCCG 57.399 39.130 21.68 0.00 0.00 5.14
672 678 2.258286 GTGCCACAACCCGATTGC 59.742 61.111 0.00 0.00 42.62 3.56
709 715 0.955919 GAGAACCCAACTCGGCTTGG 60.956 60.000 5.31 5.31 40.57 3.61
711 717 0.955919 GAACCCAACTCGGCTTGGAG 60.956 60.000 12.22 1.69 43.19 3.86
715 721 0.674895 CCAACTCGGCTTGGAGAAGG 60.675 60.000 6.23 4.74 43.19 3.46
755 761 3.735704 TTTTTCCGCCATCCTCACA 57.264 47.368 0.00 0.00 0.00 3.58
840 866 0.541863 CAGGGTCATAGCCGTTTCCT 59.458 55.000 0.00 0.00 41.56 3.36
847 873 3.078837 TCATAGCCGTTTCCTTTGTTCC 58.921 45.455 0.00 0.00 0.00 3.62
849 875 1.605753 AGCCGTTTCCTTTGTTCCTC 58.394 50.000 0.00 0.00 0.00 3.71
850 876 0.596577 GCCGTTTCCTTTGTTCCTCC 59.403 55.000 0.00 0.00 0.00 4.30
851 877 0.872388 CCGTTTCCTTTGTTCCTCCG 59.128 55.000 0.00 0.00 0.00 4.63
852 878 1.589803 CGTTTCCTTTGTTCCTCCGT 58.410 50.000 0.00 0.00 0.00 4.69
856 882 2.314071 TCCTTTGTTCCTCCGTCCTA 57.686 50.000 0.00 0.00 0.00 2.94
857 883 2.612000 TCCTTTGTTCCTCCGTCCTAA 58.388 47.619 0.00 0.00 0.00 2.69
858 884 2.301009 TCCTTTGTTCCTCCGTCCTAAC 59.699 50.000 0.00 0.00 0.00 2.34
863 889 2.309755 TGTTCCTCCGTCCTAACTCCTA 59.690 50.000 0.00 0.00 0.00 2.94
953 1142 0.301987 GCTTACGATTGAAGGCGAGC 59.698 55.000 0.00 0.00 0.00 5.03
978 1167 0.469892 AAACCCAGCCCAGAAACCTG 60.470 55.000 0.00 0.00 0.00 4.00
1071 1260 1.064296 CTTCGTCGTCATCCTCGGG 59.936 63.158 0.00 0.00 0.00 5.14
1114 1303 1.228306 CGCGATCCCTCCTCTACCT 60.228 63.158 0.00 0.00 0.00 3.08
1115 1304 0.036448 CGCGATCCCTCCTCTACCTA 59.964 60.000 0.00 0.00 0.00 3.08
1116 1305 1.544982 CGCGATCCCTCCTCTACCTAA 60.545 57.143 0.00 0.00 0.00 2.69
1117 1306 2.164338 GCGATCCCTCCTCTACCTAAG 58.836 57.143 0.00 0.00 0.00 2.18
1118 1307 2.164338 CGATCCCTCCTCTACCTAAGC 58.836 57.143 0.00 0.00 0.00 3.09
1119 1308 2.531771 GATCCCTCCTCTACCTAAGCC 58.468 57.143 0.00 0.00 0.00 4.35
1120 1309 1.621733 TCCCTCCTCTACCTAAGCCT 58.378 55.000 0.00 0.00 0.00 4.58
1121 1310 1.499870 TCCCTCCTCTACCTAAGCCTC 59.500 57.143 0.00 0.00 0.00 4.70
1122 1311 1.481615 CCCTCCTCTACCTAAGCCTCC 60.482 61.905 0.00 0.00 0.00 4.30
1123 1312 1.481615 CCTCCTCTACCTAAGCCTCCC 60.482 61.905 0.00 0.00 0.00 4.30
1124 1313 0.561680 TCCTCTACCTAAGCCTCCCC 59.438 60.000 0.00 0.00 0.00 4.81
1125 1314 0.472161 CCTCTACCTAAGCCTCCCCC 60.472 65.000 0.00 0.00 0.00 5.40
1126 1315 0.563672 CTCTACCTAAGCCTCCCCCT 59.436 60.000 0.00 0.00 0.00 4.79
1127 1316 0.561680 TCTACCTAAGCCTCCCCCTC 59.438 60.000 0.00 0.00 0.00 4.30
1128 1317 0.472161 CTACCTAAGCCTCCCCCTCC 60.472 65.000 0.00 0.00 0.00 4.30
1129 1318 1.969740 TACCTAAGCCTCCCCCTCCC 61.970 65.000 0.00 0.00 0.00 4.30
1130 1319 2.706071 CTAAGCCTCCCCCTCCCT 59.294 66.667 0.00 0.00 0.00 4.20
1131 1320 1.460497 CTAAGCCTCCCCCTCCCTC 60.460 68.421 0.00 0.00 0.00 4.30
1132 1321 1.947254 TAAGCCTCCCCCTCCCTCT 60.947 63.158 0.00 0.00 0.00 3.69
1138 1327 3.039526 CCCCCTCCCTCTCCTCCT 61.040 72.222 0.00 0.00 0.00 3.69
1161 1350 2.225727 GCGTTCCGATCTGGTTTCTTTT 59.774 45.455 3.97 0.00 39.52 2.27
1167 1356 2.290960 CGATCTGGTTTCTTTTCCCCCT 60.291 50.000 0.00 0.00 0.00 4.79
1173 1362 3.645687 TGGTTTCTTTTCCCCCTTTCATG 59.354 43.478 0.00 0.00 0.00 3.07
1174 1363 3.007940 GGTTTCTTTTCCCCCTTTCATGG 59.992 47.826 0.00 0.00 0.00 3.66
1177 1366 2.158173 TCTTTTCCCCCTTTCATGGCTT 60.158 45.455 0.00 0.00 0.00 4.35
1179 1368 0.783206 TTCCCCCTTTCATGGCTTGA 59.217 50.000 0.00 0.00 0.00 3.02
1180 1369 1.009997 TCCCCCTTTCATGGCTTGAT 58.990 50.000 3.72 0.00 33.34 2.57
1181 1370 1.117150 CCCCCTTTCATGGCTTGATG 58.883 55.000 3.72 1.17 33.34 3.07
1209 1398 0.543277 TGAGCTGATCATCCCGCTTT 59.457 50.000 8.43 0.00 31.12 3.51
1372 1565 4.590850 ACTCCATCCTTTTCTTGTTTGC 57.409 40.909 0.00 0.00 0.00 3.68
1398 1591 3.675613 TCCCCTCCTTTATATGCCTCAA 58.324 45.455 0.00 0.00 0.00 3.02
1463 1671 0.407139 ATCAGCAACTTGGCCTCCTT 59.593 50.000 3.32 0.00 0.00 3.36
1483 1691 7.387265 TCCTTTTAGCTTGATACCATCCATA 57.613 36.000 0.00 0.00 0.00 2.74
1484 1692 7.453393 TCCTTTTAGCTTGATACCATCCATAG 58.547 38.462 0.00 0.00 0.00 2.23
1487 1695 4.899352 AGCTTGATACCATCCATAGTCC 57.101 45.455 0.00 0.00 0.00 3.85
1498 1706 6.025539 ACCATCCATAGTCCTCATTGCTATA 58.974 40.000 0.00 0.00 0.00 1.31
1506 1714 9.387257 CATAGTCCTCATTGCTATATTATTGCA 57.613 33.333 8.44 8.44 39.16 4.08
1536 1744 3.679502 GCAAGCAATTACAGCGGAATTTT 59.320 39.130 0.00 0.00 37.01 1.82
1696 1908 1.949525 CCATATTTCAAGACTGCCCCG 59.050 52.381 0.00 0.00 0.00 5.73
1730 1942 4.500375 GGCTGTCATCTTTGTTTTGAAGCT 60.500 41.667 0.00 0.00 0.00 3.74
1791 2003 2.930887 GCACTTGCAACGTATCAGAGGA 60.931 50.000 0.00 0.00 41.59 3.71
1935 2147 9.837525 CATAGTACTTCGTTTGTCTAAACTACT 57.162 33.333 0.00 0.00 43.13 2.57
1938 2150 9.061435 AGTACTTCGTTTGTCTAAACTACTACT 57.939 33.333 0.00 0.00 43.13 2.57
1939 2151 9.323963 GTACTTCGTTTGTCTAAACTACTACTC 57.676 37.037 0.00 0.00 43.13 2.59
1940 2152 7.366513 ACTTCGTTTGTCTAAACTACTACTCC 58.633 38.462 0.00 0.00 43.13 3.85
1941 2153 6.259550 TCGTTTGTCTAAACTACTACTCCC 57.740 41.667 0.00 0.00 43.13 4.30
1942 2154 6.006449 TCGTTTGTCTAAACTACTACTCCCT 58.994 40.000 0.00 0.00 43.13 4.20
1943 2155 6.150140 TCGTTTGTCTAAACTACTACTCCCTC 59.850 42.308 0.00 0.00 43.13 4.30
1944 2156 6.150809 CGTTTGTCTAAACTACTACTCCCTCT 59.849 42.308 0.00 0.00 43.13 3.69
1945 2157 7.314393 GTTTGTCTAAACTACTACTCCCTCTG 58.686 42.308 0.00 0.00 42.26 3.35
1946 2158 6.137104 TGTCTAAACTACTACTCCCTCTGT 57.863 41.667 0.00 0.00 0.00 3.41
1947 2159 7.262990 TGTCTAAACTACTACTCCCTCTGTA 57.737 40.000 0.00 0.00 0.00 2.74
1948 2160 7.693132 TGTCTAAACTACTACTCCCTCTGTAA 58.307 38.462 0.00 0.00 0.00 2.41
1949 2161 7.609532 TGTCTAAACTACTACTCCCTCTGTAAC 59.390 40.741 0.00 0.00 0.00 2.50
1950 2162 5.893897 AAACTACTACTCCCTCTGTAACG 57.106 43.478 0.00 0.00 0.00 3.18
1951 2163 4.566426 ACTACTACTCCCTCTGTAACGT 57.434 45.455 0.00 0.00 0.00 3.99
1952 2164 5.683876 ACTACTACTCCCTCTGTAACGTA 57.316 43.478 0.00 0.00 0.00 3.57
1953 2165 6.054860 ACTACTACTCCCTCTGTAACGTAA 57.945 41.667 0.00 0.00 0.00 3.18
1954 2166 6.657875 ACTACTACTCCCTCTGTAACGTAAT 58.342 40.000 0.00 0.00 0.00 1.89
1955 2167 7.796054 ACTACTACTCCCTCTGTAACGTAATA 58.204 38.462 0.00 0.00 0.00 0.98
1956 2168 8.435982 ACTACTACTCCCTCTGTAACGTAATAT 58.564 37.037 0.00 0.00 0.00 1.28
1957 2169 9.282569 CTACTACTCCCTCTGTAACGTAATATT 57.717 37.037 0.00 0.00 0.00 1.28
1958 2170 8.530804 ACTACTCCCTCTGTAACGTAATATTT 57.469 34.615 0.00 0.00 0.00 1.40
1959 2171 8.411683 ACTACTCCCTCTGTAACGTAATATTTG 58.588 37.037 0.00 0.00 0.00 2.32
1960 2172 7.179076 ACTCCCTCTGTAACGTAATATTTGT 57.821 36.000 0.00 0.00 0.00 2.83
1961 2173 7.263496 ACTCCCTCTGTAACGTAATATTTGTC 58.737 38.462 0.00 0.00 0.00 3.18
1962 2174 6.267817 TCCCTCTGTAACGTAATATTTGTCG 58.732 40.000 0.00 0.00 0.00 4.35
1963 2175 5.051240 CCCTCTGTAACGTAATATTTGTCGC 60.051 44.000 0.00 0.00 0.00 5.19
1964 2176 5.747197 CCTCTGTAACGTAATATTTGTCGCT 59.253 40.000 0.00 0.00 0.00 4.93
1965 2177 6.291637 CCTCTGTAACGTAATATTTGTCGCTG 60.292 42.308 0.00 0.00 0.00 5.18
1966 2178 5.517411 TCTGTAACGTAATATTTGTCGCTGG 59.483 40.000 0.00 0.00 0.00 4.85
1967 2179 5.409211 TGTAACGTAATATTTGTCGCTGGA 58.591 37.500 0.00 0.00 0.00 3.86
1968 2180 5.517411 TGTAACGTAATATTTGTCGCTGGAG 59.483 40.000 0.00 0.00 0.00 3.86
1969 2181 4.119442 ACGTAATATTTGTCGCTGGAGT 57.881 40.909 0.00 0.00 0.00 3.85
1970 2182 5.252969 ACGTAATATTTGTCGCTGGAGTA 57.747 39.130 0.00 0.00 0.00 2.59
1971 2183 5.279384 ACGTAATATTTGTCGCTGGAGTAG 58.721 41.667 0.00 0.00 0.00 2.57
2005 2217 6.158175 GCTACTCCAGCGACAAATATTATG 57.842 41.667 0.00 0.00 41.37 1.90
2006 2218 5.120830 GCTACTCCAGCGACAAATATTATGG 59.879 44.000 0.00 0.00 41.37 2.74
2007 2219 5.036117 ACTCCAGCGACAAATATTATGGT 57.964 39.130 0.00 0.00 0.00 3.55
2008 2220 6.169557 ACTCCAGCGACAAATATTATGGTA 57.830 37.500 0.00 0.00 0.00 3.25
2009 2221 5.989777 ACTCCAGCGACAAATATTATGGTAC 59.010 40.000 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.003118 CCACGTTCCATCTTCCCTTCA 59.997 52.381 0.00 0.00 0.00 3.02
1 2 1.679032 CCCACGTTCCATCTTCCCTTC 60.679 57.143 0.00 0.00 0.00 3.46
2 3 0.328258 CCCACGTTCCATCTTCCCTT 59.672 55.000 0.00 0.00 0.00 3.95
3 4 0.840722 ACCCACGTTCCATCTTCCCT 60.841 55.000 0.00 0.00 0.00 4.20
4 5 0.037734 AACCCACGTTCCATCTTCCC 59.962 55.000 0.00 0.00 0.00 3.97
5 6 1.905637 AAACCCACGTTCCATCTTCC 58.094 50.000 0.00 0.00 0.00 3.46
6 7 6.147328 GCTATATAAACCCACGTTCCATCTTC 59.853 42.308 0.00 0.00 0.00 2.87
7 8 5.995897 GCTATATAAACCCACGTTCCATCTT 59.004 40.000 0.00 0.00 0.00 2.40
8 9 5.512576 GGCTATATAAACCCACGTTCCATCT 60.513 44.000 0.00 0.00 0.00 2.90
9 10 4.694037 GGCTATATAAACCCACGTTCCATC 59.306 45.833 0.00 0.00 0.00 3.51
10 11 4.506095 GGGCTATATAAACCCACGTTCCAT 60.506 45.833 13.45 0.00 43.64 3.41
11 12 3.181452 GGGCTATATAAACCCACGTTCCA 60.181 47.826 13.45 0.00 43.64 3.53
12 13 3.405831 GGGCTATATAAACCCACGTTCC 58.594 50.000 13.45 0.00 43.64 3.62
19 20 6.127101 ACTTCTGTTTGGGCTATATAAACCC 58.873 40.000 11.97 11.97 44.52 4.11
20 21 6.018180 CGACTTCTGTTTGGGCTATATAAACC 60.018 42.308 0.00 0.00 34.32 3.27
21 22 6.537660 ACGACTTCTGTTTGGGCTATATAAAC 59.462 38.462 0.00 0.00 35.46 2.01
22 23 6.646267 ACGACTTCTGTTTGGGCTATATAAA 58.354 36.000 0.00 0.00 0.00 1.40
23 24 6.229936 ACGACTTCTGTTTGGGCTATATAA 57.770 37.500 0.00 0.00 0.00 0.98
24 25 5.864418 ACGACTTCTGTTTGGGCTATATA 57.136 39.130 0.00 0.00 0.00 0.86
25 26 4.755266 ACGACTTCTGTTTGGGCTATAT 57.245 40.909 0.00 0.00 0.00 0.86
26 27 4.250464 CAACGACTTCTGTTTGGGCTATA 58.750 43.478 0.00 0.00 0.00 1.31
27 28 3.074412 CAACGACTTCTGTTTGGGCTAT 58.926 45.455 0.00 0.00 0.00 2.97
28 29 2.489971 CAACGACTTCTGTTTGGGCTA 58.510 47.619 0.00 0.00 0.00 3.93
29 30 1.308998 CAACGACTTCTGTTTGGGCT 58.691 50.000 0.00 0.00 0.00 5.19
30 31 0.310854 CCAACGACTTCTGTTTGGGC 59.689 55.000 0.00 0.00 32.93 5.36
31 32 1.961793 TCCAACGACTTCTGTTTGGG 58.038 50.000 0.00 0.00 35.70 4.12
32 33 2.350772 GCATCCAACGACTTCTGTTTGG 60.351 50.000 0.00 0.00 36.11 3.28
33 34 2.290367 TGCATCCAACGACTTCTGTTTG 59.710 45.455 0.00 0.00 0.00 2.93
34 35 2.571212 TGCATCCAACGACTTCTGTTT 58.429 42.857 0.00 0.00 0.00 2.83
35 36 2.254546 TGCATCCAACGACTTCTGTT 57.745 45.000 0.00 0.00 0.00 3.16
36 37 2.079158 CATGCATCCAACGACTTCTGT 58.921 47.619 0.00 0.00 0.00 3.41
37 38 1.399440 CCATGCATCCAACGACTTCTG 59.601 52.381 0.00 0.00 0.00 3.02
38 39 1.742761 CCATGCATCCAACGACTTCT 58.257 50.000 0.00 0.00 0.00 2.85
39 40 0.099436 GCCATGCATCCAACGACTTC 59.901 55.000 0.00 0.00 0.00 3.01
40 41 0.322816 AGCCATGCATCCAACGACTT 60.323 50.000 0.00 0.00 0.00 3.01
41 42 0.745845 GAGCCATGCATCCAACGACT 60.746 55.000 0.00 0.00 0.00 4.18
42 43 0.745845 AGAGCCATGCATCCAACGAC 60.746 55.000 0.00 0.00 0.00 4.34
43 44 0.462581 GAGAGCCATGCATCCAACGA 60.463 55.000 0.00 0.00 0.00 3.85
44 45 0.745486 TGAGAGCCATGCATCCAACG 60.745 55.000 0.00 0.00 0.00 4.10
45 46 1.607628 GATGAGAGCCATGCATCCAAC 59.392 52.381 0.00 0.00 35.17 3.77
46 47 1.493446 AGATGAGAGCCATGCATCCAA 59.507 47.619 0.00 0.00 39.30 3.53
47 48 1.137697 AGATGAGAGCCATGCATCCA 58.862 50.000 0.00 0.00 39.30 3.41
48 49 3.072944 GTTAGATGAGAGCCATGCATCC 58.927 50.000 0.00 0.00 39.30 3.51
49 50 2.735663 CGTTAGATGAGAGCCATGCATC 59.264 50.000 0.00 0.00 38.89 3.91
50 51 2.549563 CCGTTAGATGAGAGCCATGCAT 60.550 50.000 0.00 0.00 35.17 3.96
51 52 1.202568 CCGTTAGATGAGAGCCATGCA 60.203 52.381 0.00 0.00 35.17 3.96
52 53 1.506493 CCGTTAGATGAGAGCCATGC 58.494 55.000 0.00 0.00 35.17 4.06
53 54 1.506493 GCCGTTAGATGAGAGCCATG 58.494 55.000 0.00 0.00 35.17 3.66
54 55 0.394565 GGCCGTTAGATGAGAGCCAT 59.605 55.000 0.00 0.00 40.20 4.40
55 56 1.823295 GGCCGTTAGATGAGAGCCA 59.177 57.895 0.00 0.00 40.20 4.75
56 57 1.300233 CGGCCGTTAGATGAGAGCC 60.300 63.158 19.50 0.00 37.03 4.70
57 58 1.300233 CCGGCCGTTAGATGAGAGC 60.300 63.158 26.12 0.00 0.00 4.09
58 59 1.364171 CCCGGCCGTTAGATGAGAG 59.636 63.158 26.12 3.84 0.00 3.20
59 60 2.792947 GCCCGGCCGTTAGATGAGA 61.793 63.158 26.12 0.00 0.00 3.27
60 61 2.280186 GCCCGGCCGTTAGATGAG 60.280 66.667 26.12 5.50 0.00 2.90
61 62 4.215742 CGCCCGGCCGTTAGATGA 62.216 66.667 26.12 0.00 0.00 2.92
65 66 4.944372 CTAGCGCCCGGCCGTTAG 62.944 72.222 26.12 14.07 45.17 2.34
71 72 4.874977 GTCAGACTAGCGCCCGGC 62.875 72.222 2.29 0.00 44.05 6.13
72 73 2.298158 ATTGTCAGACTAGCGCCCGG 62.298 60.000 2.29 0.00 0.00 5.73
73 74 0.460284 AATTGTCAGACTAGCGCCCG 60.460 55.000 2.29 0.00 0.00 6.13
74 75 1.739067 AAATTGTCAGACTAGCGCCC 58.261 50.000 2.29 0.00 0.00 6.13
75 76 3.003480 AGAAAATTGTCAGACTAGCGCC 58.997 45.455 2.29 0.00 0.00 6.53
76 77 4.268884 CCTAGAAAATTGTCAGACTAGCGC 59.731 45.833 0.00 0.00 0.00 5.92
77 78 5.651530 TCCTAGAAAATTGTCAGACTAGCG 58.348 41.667 1.31 0.00 0.00 4.26
78 79 7.268586 TGATCCTAGAAAATTGTCAGACTAGC 58.731 38.462 1.31 0.00 0.00 3.42
79 80 8.690884 TCTGATCCTAGAAAATTGTCAGACTAG 58.309 37.037 1.31 0.00 36.61 2.57
80 81 8.595362 TCTGATCCTAGAAAATTGTCAGACTA 57.405 34.615 1.31 0.00 36.61 2.59
81 82 7.487822 TCTGATCCTAGAAAATTGTCAGACT 57.512 36.000 1.31 0.00 36.61 3.24
83 84 7.487822 AGTCTGATCCTAGAAAATTGTCAGA 57.512 36.000 0.00 0.00 38.50 3.27
84 85 8.040132 AGAAGTCTGATCCTAGAAAATTGTCAG 58.960 37.037 0.00 0.00 34.45 3.51
85 86 7.821359 CAGAAGTCTGATCCTAGAAAATTGTCA 59.179 37.037 1.88 0.00 46.59 3.58
86 87 8.195617 CAGAAGTCTGATCCTAGAAAATTGTC 57.804 38.462 1.88 0.00 46.59 3.18
102 103 1.827969 ACCCTTCCGATCAGAAGTCTG 59.172 52.381 15.83 1.65 41.45 3.51
103 104 2.239681 ACCCTTCCGATCAGAAGTCT 57.760 50.000 15.83 0.00 41.45 3.24
104 105 3.263261 GAAACCCTTCCGATCAGAAGTC 58.737 50.000 15.83 4.98 41.45 3.01
105 106 2.027100 GGAAACCCTTCCGATCAGAAGT 60.027 50.000 15.83 0.00 41.89 3.01
106 107 2.633488 GGAAACCCTTCCGATCAGAAG 58.367 52.381 11.17 11.17 41.89 2.85
107 108 2.781681 GGAAACCCTTCCGATCAGAA 57.218 50.000 0.00 0.00 41.89 3.02
121 122 5.416639 ACGGTTGGTATAAATCTTGGGAAAC 59.583 40.000 0.00 0.00 0.00 2.78
122 123 5.416326 CACGGTTGGTATAAATCTTGGGAAA 59.584 40.000 0.00 0.00 0.00 3.13
123 124 4.944930 CACGGTTGGTATAAATCTTGGGAA 59.055 41.667 0.00 0.00 0.00 3.97
124 125 4.225492 TCACGGTTGGTATAAATCTTGGGA 59.775 41.667 0.00 0.00 0.00 4.37
125 126 4.519213 TCACGGTTGGTATAAATCTTGGG 58.481 43.478 0.00 0.00 0.00 4.12
126 127 5.183228 ACTCACGGTTGGTATAAATCTTGG 58.817 41.667 0.00 0.00 0.00 3.61
127 128 6.479001 CCTACTCACGGTTGGTATAAATCTTG 59.521 42.308 0.00 0.00 36.36 3.02
128 129 6.579865 CCTACTCACGGTTGGTATAAATCTT 58.420 40.000 0.00 0.00 36.36 2.40
129 130 5.452917 GCCTACTCACGGTTGGTATAAATCT 60.453 44.000 0.00 0.00 41.69 2.40
130 131 4.748600 GCCTACTCACGGTTGGTATAAATC 59.251 45.833 0.00 0.00 41.69 2.17
131 132 4.700700 GCCTACTCACGGTTGGTATAAAT 58.299 43.478 0.00 0.00 41.69 1.40
132 133 3.429272 CGCCTACTCACGGTTGGTATAAA 60.429 47.826 0.00 0.00 41.69 1.40
133 134 2.099592 CGCCTACTCACGGTTGGTATAA 59.900 50.000 0.00 0.00 41.69 0.98
134 135 1.677576 CGCCTACTCACGGTTGGTATA 59.322 52.381 0.00 0.00 41.69 1.47
135 136 0.458669 CGCCTACTCACGGTTGGTAT 59.541 55.000 0.00 0.00 41.69 2.73
136 137 1.597797 CCGCCTACTCACGGTTGGTA 61.598 60.000 0.00 0.00 44.46 3.25
137 138 2.654877 CGCCTACTCACGGTTGGT 59.345 61.111 0.00 0.00 41.69 3.67
138 139 2.125673 CCGCCTACTCACGGTTGG 60.126 66.667 0.00 0.00 44.46 3.77
143 144 0.656785 GTACTCTCCGCCTACTCACG 59.343 60.000 0.00 0.00 0.00 4.35
144 145 1.747709 TGTACTCTCCGCCTACTCAC 58.252 55.000 0.00 0.00 0.00 3.51
145 146 2.730934 ATGTACTCTCCGCCTACTCA 57.269 50.000 0.00 0.00 0.00 3.41
146 147 4.579753 AGTTTATGTACTCTCCGCCTACTC 59.420 45.833 0.00 0.00 0.00 2.59
147 148 4.534797 AGTTTATGTACTCTCCGCCTACT 58.465 43.478 0.00 0.00 0.00 2.57
148 149 4.915158 AGTTTATGTACTCTCCGCCTAC 57.085 45.455 0.00 0.00 0.00 3.18
149 150 5.657474 CAAAGTTTATGTACTCTCCGCCTA 58.343 41.667 0.00 0.00 0.00 3.93
150 151 4.504858 CAAAGTTTATGTACTCTCCGCCT 58.495 43.478 0.00 0.00 0.00 5.52
151 152 3.063588 GCAAAGTTTATGTACTCTCCGCC 59.936 47.826 0.00 0.00 0.00 6.13
152 153 3.063588 GGCAAAGTTTATGTACTCTCCGC 59.936 47.826 0.00 0.00 0.00 5.54
153 154 4.250464 TGGCAAAGTTTATGTACTCTCCG 58.750 43.478 0.00 0.00 0.00 4.63
154 155 7.715249 TCATATGGCAAAGTTTATGTACTCTCC 59.285 37.037 2.13 0.00 0.00 3.71
155 156 8.662781 TCATATGGCAAAGTTTATGTACTCTC 57.337 34.615 2.13 0.00 0.00 3.20
156 157 9.060347 CATCATATGGCAAAGTTTATGTACTCT 57.940 33.333 2.13 0.00 0.00 3.24
157 158 8.840321 ACATCATATGGCAAAGTTTATGTACTC 58.160 33.333 2.13 0.00 33.60 2.59
158 159 8.623903 CACATCATATGGCAAAGTTTATGTACT 58.376 33.333 2.13 0.00 33.60 2.73
159 160 7.862372 CCACATCATATGGCAAAGTTTATGTAC 59.138 37.037 2.13 0.00 33.60 2.90
160 161 7.014134 CCCACATCATATGGCAAAGTTTATGTA 59.986 37.037 2.13 0.00 35.74 2.29
161 162 6.183360 CCCACATCATATGGCAAAGTTTATGT 60.183 38.462 2.13 0.00 35.74 2.29
162 163 6.040729 TCCCACATCATATGGCAAAGTTTATG 59.959 38.462 2.13 0.00 35.74 1.90
163 164 6.135454 TCCCACATCATATGGCAAAGTTTAT 58.865 36.000 2.13 0.00 35.74 1.40
164 165 5.514169 TCCCACATCATATGGCAAAGTTTA 58.486 37.500 2.13 0.00 35.74 2.01
165 166 4.352009 TCCCACATCATATGGCAAAGTTT 58.648 39.130 2.13 0.00 35.74 2.66
166 167 3.956199 CTCCCACATCATATGGCAAAGTT 59.044 43.478 2.13 0.00 35.74 2.66
167 168 3.053395 ACTCCCACATCATATGGCAAAGT 60.053 43.478 2.13 0.00 35.74 2.66
168 169 3.559069 ACTCCCACATCATATGGCAAAG 58.441 45.455 2.13 0.00 35.74 2.77
169 170 3.668141 ACTCCCACATCATATGGCAAA 57.332 42.857 2.13 0.00 35.74 3.68
170 171 4.999469 ATACTCCCACATCATATGGCAA 57.001 40.909 2.13 0.00 35.74 4.52
171 172 7.747809 TTATATACTCCCACATCATATGGCA 57.252 36.000 2.13 0.00 35.74 4.92
172 173 8.046708 TGTTTATATACTCCCACATCATATGGC 58.953 37.037 2.13 0.00 35.74 4.40
173 174 9.958180 TTGTTTATATACTCCCACATCATATGG 57.042 33.333 2.13 0.00 36.94 2.74
177 178 9.730705 CTCATTGTTTATATACTCCCACATCAT 57.269 33.333 0.00 0.00 0.00 2.45
178 179 8.933653 TCTCATTGTTTATATACTCCCACATCA 58.066 33.333 0.00 0.00 0.00 3.07
179 180 9.950496 ATCTCATTGTTTATATACTCCCACATC 57.050 33.333 0.00 0.00 0.00 3.06
182 183 9.355215 CGTATCTCATTGTTTATATACTCCCAC 57.645 37.037 0.00 0.00 0.00 4.61
183 184 9.085645 ACGTATCTCATTGTTTATATACTCCCA 57.914 33.333 0.00 0.00 0.00 4.37
184 185 9.924650 AACGTATCTCATTGTTTATATACTCCC 57.075 33.333 0.00 0.00 0.00 4.30
191 192 9.647797 ACAAGACAACGTATCTCATTGTTTATA 57.352 29.630 2.93 0.00 36.70 0.98
192 193 8.547967 ACAAGACAACGTATCTCATTGTTTAT 57.452 30.769 2.93 0.00 36.70 1.40
193 194 7.870954 AGACAAGACAACGTATCTCATTGTTTA 59.129 33.333 2.93 0.00 36.70 2.01
194 195 6.706270 AGACAAGACAACGTATCTCATTGTTT 59.294 34.615 2.93 0.00 36.70 2.83
195 196 6.223852 AGACAAGACAACGTATCTCATTGTT 58.776 36.000 2.93 0.00 36.70 2.83
196 197 5.784177 AGACAAGACAACGTATCTCATTGT 58.216 37.500 2.93 4.46 39.23 2.71
197 198 7.251281 TCTAGACAAGACAACGTATCTCATTG 58.749 38.462 2.93 1.61 0.00 2.82
198 199 7.392494 TCTAGACAAGACAACGTATCTCATT 57.608 36.000 2.93 0.00 0.00 2.57
199 200 7.392494 TTCTAGACAAGACAACGTATCTCAT 57.608 36.000 2.93 0.00 32.51 2.90
200 201 6.812879 TTCTAGACAAGACAACGTATCTCA 57.187 37.500 2.93 0.00 32.51 3.27
201 202 7.251994 ACATTCTAGACAAGACAACGTATCTC 58.748 38.462 2.93 0.00 32.51 2.75
202 203 7.159322 ACATTCTAGACAAGACAACGTATCT 57.841 36.000 0.00 0.00 32.51 1.98
203 204 7.813852 AACATTCTAGACAAGACAACGTATC 57.186 36.000 0.00 0.00 32.51 2.24
204 205 8.521176 AGTAACATTCTAGACAAGACAACGTAT 58.479 33.333 0.00 0.00 32.51 3.06
205 206 7.879070 AGTAACATTCTAGACAAGACAACGTA 58.121 34.615 0.00 0.00 32.51 3.57
206 207 6.746120 AGTAACATTCTAGACAAGACAACGT 58.254 36.000 0.00 0.00 32.51 3.99
207 208 8.738199 TTAGTAACATTCTAGACAAGACAACG 57.262 34.615 0.00 0.00 32.51 4.10
267 268 8.085909 GGGTGTACAAAGTATTTATGTTGCTTT 58.914 33.333 0.00 0.00 35.03 3.51
268 269 7.231722 TGGGTGTACAAAGTATTTATGTTGCTT 59.768 33.333 0.00 0.00 35.03 3.91
269 270 6.717540 TGGGTGTACAAAGTATTTATGTTGCT 59.282 34.615 0.00 0.00 35.03 3.91
270 271 6.804783 GTGGGTGTACAAAGTATTTATGTTGC 59.195 38.462 0.00 0.00 35.03 4.17
271 272 7.040340 TGGTGGGTGTACAAAGTATTTATGTTG 60.040 37.037 0.00 0.00 35.03 3.33
272 273 7.005296 TGGTGGGTGTACAAAGTATTTATGTT 58.995 34.615 0.00 0.00 35.03 2.71
273 274 6.544650 TGGTGGGTGTACAAAGTATTTATGT 58.455 36.000 0.00 0.00 35.03 2.29
274 275 7.122055 ACATGGTGGGTGTACAAAGTATTTATG 59.878 37.037 0.00 0.00 35.03 1.90
275 276 7.179269 ACATGGTGGGTGTACAAAGTATTTAT 58.821 34.615 0.00 0.00 35.03 1.40
276 277 6.544650 ACATGGTGGGTGTACAAAGTATTTA 58.455 36.000 0.00 0.00 35.03 1.40
277 278 5.390387 ACATGGTGGGTGTACAAAGTATTT 58.610 37.500 0.00 0.00 40.26 1.40
278 279 4.993028 ACATGGTGGGTGTACAAAGTATT 58.007 39.130 0.00 0.00 0.00 1.89
279 280 4.650972 ACATGGTGGGTGTACAAAGTAT 57.349 40.909 0.00 0.00 0.00 2.12
280 281 4.391155 GAACATGGTGGGTGTACAAAGTA 58.609 43.478 0.00 0.00 0.00 2.24
281 282 3.219281 GAACATGGTGGGTGTACAAAGT 58.781 45.455 0.00 0.00 0.00 2.66
282 283 2.556622 GGAACATGGTGGGTGTACAAAG 59.443 50.000 0.00 0.00 0.00 2.77
283 284 2.091830 TGGAACATGGTGGGTGTACAAA 60.092 45.455 0.00 0.00 0.00 2.83
284 285 1.495148 TGGAACATGGTGGGTGTACAA 59.505 47.619 0.00 0.00 0.00 2.41
285 286 1.141185 TGGAACATGGTGGGTGTACA 58.859 50.000 0.00 0.00 0.00 2.90
299 300 0.035630 AGGCAGAGCAGACATGGAAC 60.036 55.000 0.00 0.00 0.00 3.62
300 301 0.251354 GAGGCAGAGCAGACATGGAA 59.749 55.000 0.00 0.00 0.00 3.53
301 302 0.906282 TGAGGCAGAGCAGACATGGA 60.906 55.000 0.00 0.00 0.00 3.41
302 303 0.743701 GTGAGGCAGAGCAGACATGG 60.744 60.000 0.00 0.00 0.00 3.66
303 304 0.036671 TGTGAGGCAGAGCAGACATG 60.037 55.000 0.00 0.00 0.00 3.21
304 305 0.689055 TTGTGAGGCAGAGCAGACAT 59.311 50.000 0.00 0.00 0.00 3.06
305 306 0.250038 GTTGTGAGGCAGAGCAGACA 60.250 55.000 0.00 0.00 0.00 3.41
306 307 1.287730 CGTTGTGAGGCAGAGCAGAC 61.288 60.000 0.00 0.00 0.00 3.51
307 308 1.005748 CGTTGTGAGGCAGAGCAGA 60.006 57.895 0.00 0.00 0.00 4.26
308 309 0.038251 TACGTTGTGAGGCAGAGCAG 60.038 55.000 0.00 0.00 0.00 4.24
309 310 0.038251 CTACGTTGTGAGGCAGAGCA 60.038 55.000 0.00 0.00 0.00 4.26
310 311 0.737715 CCTACGTTGTGAGGCAGAGC 60.738 60.000 0.00 0.00 0.00 4.09
311 312 3.425578 CCTACGTTGTGAGGCAGAG 57.574 57.895 0.00 0.00 0.00 3.35
316 317 3.130516 TCAATCTAGCCTACGTTGTGAGG 59.869 47.826 0.00 0.00 35.78 3.86
317 318 4.371855 TCAATCTAGCCTACGTTGTGAG 57.628 45.455 0.00 0.00 0.00 3.51
318 319 4.219944 AGTTCAATCTAGCCTACGTTGTGA 59.780 41.667 0.00 0.00 0.00 3.58
319 320 4.327357 CAGTTCAATCTAGCCTACGTTGTG 59.673 45.833 0.00 0.00 0.00 3.33
320 321 4.495422 CAGTTCAATCTAGCCTACGTTGT 58.505 43.478 0.00 0.00 0.00 3.32
321 322 3.307242 GCAGTTCAATCTAGCCTACGTTG 59.693 47.826 0.00 0.00 0.00 4.10
322 323 3.056107 TGCAGTTCAATCTAGCCTACGTT 60.056 43.478 0.00 0.00 0.00 3.99
323 324 2.496070 TGCAGTTCAATCTAGCCTACGT 59.504 45.455 0.00 0.00 0.00 3.57
324 325 3.165058 TGCAGTTCAATCTAGCCTACG 57.835 47.619 0.00 0.00 0.00 3.51
325 326 4.446371 ACATGCAGTTCAATCTAGCCTAC 58.554 43.478 0.00 0.00 0.00 3.18
326 327 4.760530 ACATGCAGTTCAATCTAGCCTA 57.239 40.909 0.00 0.00 0.00 3.93
327 328 3.641434 ACATGCAGTTCAATCTAGCCT 57.359 42.857 0.00 0.00 0.00 4.58
328 329 5.059161 TGATACATGCAGTTCAATCTAGCC 58.941 41.667 0.00 0.00 0.00 3.93
329 330 6.400834 CGATGATACATGCAGTTCAATCTAGC 60.401 42.308 0.00 0.00 0.00 3.42
330 331 6.400834 GCGATGATACATGCAGTTCAATCTAG 60.401 42.308 0.00 0.00 0.00 2.43
331 332 5.406477 GCGATGATACATGCAGTTCAATCTA 59.594 40.000 0.00 0.00 0.00 1.98
332 333 4.212847 GCGATGATACATGCAGTTCAATCT 59.787 41.667 0.00 0.00 0.00 2.40
333 334 4.212847 AGCGATGATACATGCAGTTCAATC 59.787 41.667 0.00 0.00 0.00 2.67
334 335 4.132336 AGCGATGATACATGCAGTTCAAT 58.868 39.130 0.00 0.00 0.00 2.57
335 336 3.534554 AGCGATGATACATGCAGTTCAA 58.465 40.909 0.00 0.00 0.00 2.69
336 337 3.183793 AGCGATGATACATGCAGTTCA 57.816 42.857 0.00 0.00 0.00 3.18
337 338 4.051237 TGTAGCGATGATACATGCAGTTC 58.949 43.478 0.00 0.00 29.16 3.01
338 339 4.058721 TGTAGCGATGATACATGCAGTT 57.941 40.909 0.00 0.00 29.16 3.16
339 340 3.733443 TGTAGCGATGATACATGCAGT 57.267 42.857 0.00 0.00 29.16 4.40
340 341 4.564372 GGTATGTAGCGATGATACATGCAG 59.436 45.833 19.59 0.00 44.74 4.41
341 342 4.494484 GGTATGTAGCGATGATACATGCA 58.506 43.478 19.59 0.00 44.74 3.96
342 343 3.865745 GGGTATGTAGCGATGATACATGC 59.134 47.826 15.70 14.18 43.54 4.06
343 344 5.330455 AGGGTATGTAGCGATGATACATG 57.670 43.478 15.70 0.00 43.54 3.21
344 345 6.360370 AAAGGGTATGTAGCGATGATACAT 57.640 37.500 11.81 11.81 45.27 2.29
345 346 5.801531 AAAGGGTATGTAGCGATGATACA 57.198 39.130 0.00 0.00 38.76 2.29
346 347 6.704493 TGAAAAAGGGTATGTAGCGATGATAC 59.296 38.462 0.00 0.00 0.00 2.24
347 348 6.822442 TGAAAAAGGGTATGTAGCGATGATA 58.178 36.000 0.00 0.00 0.00 2.15
348 349 5.680619 TGAAAAAGGGTATGTAGCGATGAT 58.319 37.500 0.00 0.00 0.00 2.45
349 350 5.092554 TGAAAAAGGGTATGTAGCGATGA 57.907 39.130 0.00 0.00 0.00 2.92
350 351 5.116180 TCTGAAAAAGGGTATGTAGCGATG 58.884 41.667 0.00 0.00 0.00 3.84
351 352 5.353394 TCTGAAAAAGGGTATGTAGCGAT 57.647 39.130 0.00 0.00 0.00 4.58
352 353 4.811969 TCTGAAAAAGGGTATGTAGCGA 57.188 40.909 0.00 0.00 0.00 4.93
353 354 5.175859 TCTTCTGAAAAAGGGTATGTAGCG 58.824 41.667 0.00 0.00 0.00 4.26
354 355 7.175119 AGTTTCTTCTGAAAAAGGGTATGTAGC 59.825 37.037 0.00 0.00 42.94 3.58
355 356 8.622948 AGTTTCTTCTGAAAAAGGGTATGTAG 57.377 34.615 0.00 0.00 42.94 2.74
356 357 8.990163 AAGTTTCTTCTGAAAAAGGGTATGTA 57.010 30.769 0.00 0.00 42.94 2.29
357 358 7.014326 GGAAGTTTCTTCTGAAAAAGGGTATGT 59.986 37.037 8.96 0.00 42.94 2.29
358 359 7.014230 TGGAAGTTTCTTCTGAAAAAGGGTATG 59.986 37.037 8.96 0.00 42.94 2.39
359 360 7.014326 GTGGAAGTTTCTTCTGAAAAAGGGTAT 59.986 37.037 8.96 0.00 42.94 2.73
360 361 6.320418 GTGGAAGTTTCTTCTGAAAAAGGGTA 59.680 38.462 8.96 0.00 42.94 3.69
361 362 5.127194 GTGGAAGTTTCTTCTGAAAAAGGGT 59.873 40.000 8.96 0.00 42.94 4.34
362 363 5.127031 TGTGGAAGTTTCTTCTGAAAAAGGG 59.873 40.000 8.96 0.00 42.94 3.95
363 364 6.036470 GTGTGGAAGTTTCTTCTGAAAAAGG 58.964 40.000 8.96 0.00 42.94 3.11
364 365 6.036470 GGTGTGGAAGTTTCTTCTGAAAAAG 58.964 40.000 8.96 0.00 42.94 2.27
365 366 5.714806 AGGTGTGGAAGTTTCTTCTGAAAAA 59.285 36.000 8.96 0.00 42.94 1.94
366 367 5.261216 AGGTGTGGAAGTTTCTTCTGAAAA 58.739 37.500 8.96 0.00 42.94 2.29
367 368 4.855340 AGGTGTGGAAGTTTCTTCTGAAA 58.145 39.130 8.96 0.00 39.59 2.69
368 369 4.503714 AGGTGTGGAAGTTTCTTCTGAA 57.496 40.909 8.96 0.00 0.00 3.02
369 370 5.104693 TGTTAGGTGTGGAAGTTTCTTCTGA 60.105 40.000 8.96 0.00 0.00 3.27
370 371 5.123227 TGTTAGGTGTGGAAGTTTCTTCTG 58.877 41.667 8.96 0.00 0.00 3.02
371 372 5.367945 TGTTAGGTGTGGAAGTTTCTTCT 57.632 39.130 8.96 0.00 0.00 2.85
372 373 5.503520 CGTTGTTAGGTGTGGAAGTTTCTTC 60.504 44.000 1.39 1.39 0.00 2.87
373 374 4.334481 CGTTGTTAGGTGTGGAAGTTTCTT 59.666 41.667 0.00 0.00 0.00 2.52
374 375 3.875134 CGTTGTTAGGTGTGGAAGTTTCT 59.125 43.478 0.00 0.00 0.00 2.52
375 376 3.547413 GCGTTGTTAGGTGTGGAAGTTTC 60.547 47.826 0.00 0.00 0.00 2.78
376 377 2.356695 GCGTTGTTAGGTGTGGAAGTTT 59.643 45.455 0.00 0.00 0.00 2.66
377 378 1.944709 GCGTTGTTAGGTGTGGAAGTT 59.055 47.619 0.00 0.00 0.00 2.66
378 379 1.134340 TGCGTTGTTAGGTGTGGAAGT 60.134 47.619 0.00 0.00 0.00 3.01
379 380 1.588674 TGCGTTGTTAGGTGTGGAAG 58.411 50.000 0.00 0.00 0.00 3.46
380 381 2.039818 TTGCGTTGTTAGGTGTGGAA 57.960 45.000 0.00 0.00 0.00 3.53
381 382 1.671845 GTTTGCGTTGTTAGGTGTGGA 59.328 47.619 0.00 0.00 0.00 4.02
382 383 1.673920 AGTTTGCGTTGTTAGGTGTGG 59.326 47.619 0.00 0.00 0.00 4.17
383 384 3.805422 TCTAGTTTGCGTTGTTAGGTGTG 59.195 43.478 0.00 0.00 0.00 3.82
384 385 4.062677 TCTAGTTTGCGTTGTTAGGTGT 57.937 40.909 0.00 0.00 0.00 4.16
385 386 5.007332 AGTTTCTAGTTTGCGTTGTTAGGTG 59.993 40.000 0.00 0.00 0.00 4.00
386 387 5.121105 AGTTTCTAGTTTGCGTTGTTAGGT 58.879 37.500 0.00 0.00 0.00 3.08
387 388 5.668558 AGTTTCTAGTTTGCGTTGTTAGG 57.331 39.130 0.00 0.00 0.00 2.69
388 389 6.711579 TCAAGTTTCTAGTTTGCGTTGTTAG 58.288 36.000 0.00 0.00 0.00 2.34
389 390 6.665474 TCAAGTTTCTAGTTTGCGTTGTTA 57.335 33.333 0.00 0.00 0.00 2.41
390 391 5.554822 TCAAGTTTCTAGTTTGCGTTGTT 57.445 34.783 0.00 0.00 0.00 2.83
391 392 5.751243 ATCAAGTTTCTAGTTTGCGTTGT 57.249 34.783 0.00 0.00 0.00 3.32
392 393 6.430451 AGAATCAAGTTTCTAGTTTGCGTTG 58.570 36.000 0.00 0.00 34.21 4.10
393 394 6.260050 TGAGAATCAAGTTTCTAGTTTGCGTT 59.740 34.615 0.00 0.00 45.97 4.84
394 395 5.758296 TGAGAATCAAGTTTCTAGTTTGCGT 59.242 36.000 0.00 0.00 45.97 5.24
395 396 6.228273 TGAGAATCAAGTTTCTAGTTTGCG 57.772 37.500 0.00 0.00 45.97 4.85
430 431 9.430623 CGGTAATTTTTGGATCTTAATTTTGGT 57.569 29.630 0.00 0.00 0.00 3.67
431 432 9.430623 ACGGTAATTTTTGGATCTTAATTTTGG 57.569 29.630 0.00 0.00 0.00 3.28
433 434 9.990360 ACACGGTAATTTTTGGATCTTAATTTT 57.010 25.926 0.00 0.00 0.00 1.82
438 439 8.679100 CCATTACACGGTAATTTTTGGATCTTA 58.321 33.333 6.57 0.00 0.00 2.10
439 440 7.363443 CCCATTACACGGTAATTTTTGGATCTT 60.363 37.037 12.16 0.00 0.00 2.40
440 441 6.096282 CCCATTACACGGTAATTTTTGGATCT 59.904 38.462 12.16 0.00 0.00 2.75
441 442 6.095720 TCCCATTACACGGTAATTTTTGGATC 59.904 38.462 12.16 0.00 0.00 3.36
442 443 5.952947 TCCCATTACACGGTAATTTTTGGAT 59.047 36.000 12.16 0.00 0.00 3.41
443 444 5.322754 TCCCATTACACGGTAATTTTTGGA 58.677 37.500 12.16 10.18 0.00 3.53
444 445 5.393678 CCTCCCATTACACGGTAATTTTTGG 60.394 44.000 6.57 6.79 0.00 3.28
445 446 5.416326 TCCTCCCATTACACGGTAATTTTTG 59.584 40.000 6.57 0.00 0.00 2.44
446 447 5.572252 TCCTCCCATTACACGGTAATTTTT 58.428 37.500 6.57 0.00 0.00 1.94
447 448 5.182169 TCCTCCCATTACACGGTAATTTT 57.818 39.130 6.57 0.00 0.00 1.82
448 449 4.847990 TCCTCCCATTACACGGTAATTT 57.152 40.909 6.57 0.00 0.00 1.82
449 450 4.410883 TCATCCTCCCATTACACGGTAATT 59.589 41.667 6.57 0.00 0.00 1.40
450 451 3.971305 TCATCCTCCCATTACACGGTAAT 59.029 43.478 4.14 4.14 0.00 1.89
451 452 3.133362 GTCATCCTCCCATTACACGGTAA 59.867 47.826 0.00 0.00 0.00 2.85
452 453 2.696707 GTCATCCTCCCATTACACGGTA 59.303 50.000 0.00 0.00 0.00 4.02
453 454 1.485066 GTCATCCTCCCATTACACGGT 59.515 52.381 0.00 0.00 0.00 4.83
454 455 1.484653 TGTCATCCTCCCATTACACGG 59.515 52.381 0.00 0.00 0.00 4.94
455 456 2.979814 TGTCATCCTCCCATTACACG 57.020 50.000 0.00 0.00 0.00 4.49
456 457 4.696479 AGATGTCATCCTCCCATTACAC 57.304 45.455 9.29 0.00 0.00 2.90
457 458 5.221441 CGTTAGATGTCATCCTCCCATTACA 60.221 44.000 9.29 0.00 0.00 2.41
458 459 5.230942 CGTTAGATGTCATCCTCCCATTAC 58.769 45.833 9.29 0.00 0.00 1.89
459 460 4.262463 GCGTTAGATGTCATCCTCCCATTA 60.262 45.833 9.29 0.00 0.00 1.90
460 461 3.495100 GCGTTAGATGTCATCCTCCCATT 60.495 47.826 9.29 0.00 0.00 3.16
461 462 2.037772 GCGTTAGATGTCATCCTCCCAT 59.962 50.000 9.29 0.00 0.00 4.00
462 463 1.412710 GCGTTAGATGTCATCCTCCCA 59.587 52.381 9.29 0.00 0.00 4.37
463 464 1.412710 TGCGTTAGATGTCATCCTCCC 59.587 52.381 9.29 0.00 0.00 4.30
464 465 2.890808 TGCGTTAGATGTCATCCTCC 57.109 50.000 9.29 0.00 0.00 4.30
465 466 4.250116 AGATGCGTTAGATGTCATCCTC 57.750 45.455 9.29 0.11 36.81 3.71
466 467 4.343526 AGAAGATGCGTTAGATGTCATCCT 59.656 41.667 9.29 0.23 36.81 3.24
467 468 4.626042 AGAAGATGCGTTAGATGTCATCC 58.374 43.478 9.29 0.00 36.81 3.51
468 469 7.700322 TTTAGAAGATGCGTTAGATGTCATC 57.300 36.000 4.52 4.52 36.49 2.92
469 470 8.668510 AATTTAGAAGATGCGTTAGATGTCAT 57.331 30.769 0.00 0.00 0.00 3.06
470 471 8.492673 AAATTTAGAAGATGCGTTAGATGTCA 57.507 30.769 0.00 0.00 0.00 3.58
475 476 9.095065 GGAGTTAAATTTAGAAGATGCGTTAGA 57.905 33.333 0.00 0.00 0.00 2.10
476 477 8.336080 GGGAGTTAAATTTAGAAGATGCGTTAG 58.664 37.037 0.00 0.00 0.00 2.34
477 478 7.825270 TGGGAGTTAAATTTAGAAGATGCGTTA 59.175 33.333 0.00 0.00 0.00 3.18
478 479 6.657541 TGGGAGTTAAATTTAGAAGATGCGTT 59.342 34.615 0.00 0.00 0.00 4.84
479 480 6.177610 TGGGAGTTAAATTTAGAAGATGCGT 58.822 36.000 0.00 0.00 0.00 5.24
480 481 6.677781 TGGGAGTTAAATTTAGAAGATGCG 57.322 37.500 0.00 0.00 0.00 4.73
540 544 6.206048 ACGGGATGTTTTTCTCGAGTAAAAAT 59.794 34.615 25.46 20.46 42.26 1.82
624 630 2.908940 CCTCCATTCCGGCCATGC 60.909 66.667 2.24 0.00 33.14 4.06
626 632 2.597340 CACCTCCATTCCGGCCAT 59.403 61.111 2.24 0.00 33.14 4.40
635 641 1.727062 CTCTATGCCTCCACCTCCAT 58.273 55.000 0.00 0.00 0.00 3.41
685 691 4.170723 GAGTTGGGTTCTCGAGCG 57.829 61.111 7.81 0.00 0.00 5.03
709 715 6.034591 CAGCAATCAATCAATTGTCCTTCTC 58.965 40.000 5.13 0.00 38.60 2.87
711 717 5.717119 ACAGCAATCAATCAATTGTCCTTC 58.283 37.500 5.13 0.00 38.60 3.46
743 749 5.630680 GCAATTTTATTATGTGAGGATGGCG 59.369 40.000 0.00 0.00 0.00 5.69
814 820 1.037579 GGCTATGACCCTGGTTTGCC 61.038 60.000 0.00 0.00 0.00 4.52
840 866 2.301009 GGAGTTAGGACGGAGGAACAAA 59.699 50.000 0.00 0.00 0.00 2.83
847 873 2.030371 GGGTTAGGAGTTAGGACGGAG 58.970 57.143 0.00 0.00 0.00 4.63
849 875 1.856629 TGGGTTAGGAGTTAGGACGG 58.143 55.000 0.00 0.00 0.00 4.79
850 876 3.094572 TCTTGGGTTAGGAGTTAGGACG 58.905 50.000 0.00 0.00 0.00 4.79
851 877 3.451540 CCTCTTGGGTTAGGAGTTAGGAC 59.548 52.174 0.00 0.00 34.58 3.85
852 878 3.721021 CCTCTTGGGTTAGGAGTTAGGA 58.279 50.000 0.00 0.00 34.58 2.94
856 882 1.742308 TGCCTCTTGGGTTAGGAGTT 58.258 50.000 0.00 0.00 34.58 3.01
857 883 1.630878 CTTGCCTCTTGGGTTAGGAGT 59.369 52.381 0.00 0.00 34.58 3.85
858 884 1.909302 TCTTGCCTCTTGGGTTAGGAG 59.091 52.381 0.00 0.00 34.58 3.69
863 889 1.770324 CCCTCTTGCCTCTTGGGTT 59.230 57.895 0.00 0.00 37.43 4.11
895 921 4.112093 AGAAGGGGATATATGGAGAGGGTT 59.888 45.833 0.00 0.00 0.00 4.11
897 923 4.015730 AGAGAAGGGGATATATGGAGAGGG 60.016 50.000 0.00 0.00 0.00 4.30
898 924 5.219468 AGAGAAGGGGATATATGGAGAGG 57.781 47.826 0.00 0.00 0.00 3.69
943 1132 0.320771 GTTTCTCCTGCTCGCCTTCA 60.321 55.000 0.00 0.00 0.00 3.02
953 1142 1.001641 CTGGGCTGGGTTTCTCCTG 60.002 63.158 0.00 0.00 36.25 3.86
1114 1303 1.947254 AGAGGGAGGGGGAGGCTTA 60.947 63.158 0.00 0.00 0.00 3.09
1115 1304 3.296737 AGAGGGAGGGGGAGGCTT 61.297 66.667 0.00 0.00 0.00 4.35
1116 1305 3.773154 GAGAGGGAGGGGGAGGCT 61.773 72.222 0.00 0.00 0.00 4.58
1117 1306 4.890306 GGAGAGGGAGGGGGAGGC 62.890 77.778 0.00 0.00 0.00 4.70
1118 1307 3.039526 AGGAGAGGGAGGGGGAGG 61.040 72.222 0.00 0.00 0.00 4.30
1119 1308 2.612251 GAGGAGAGGGAGGGGGAG 59.388 72.222 0.00 0.00 0.00 4.30
1120 1309 3.036959 GGAGGAGAGGGAGGGGGA 61.037 72.222 0.00 0.00 0.00 4.81
1121 1310 3.039526 AGGAGGAGAGGGAGGGGG 61.040 72.222 0.00 0.00 0.00 5.40
1122 1311 2.612251 GAGGAGGAGAGGGAGGGG 59.388 72.222 0.00 0.00 0.00 4.79
1123 1312 2.197324 CGAGGAGGAGAGGGAGGG 59.803 72.222 0.00 0.00 0.00 4.30
1124 1313 2.520741 GCGAGGAGGAGAGGGAGG 60.521 72.222 0.00 0.00 0.00 4.30
1125 1314 2.904866 CGCGAGGAGGAGAGGGAG 60.905 72.222 0.00 0.00 0.00 4.30
1126 1315 3.283812 AACGCGAGGAGGAGAGGGA 62.284 63.158 15.93 0.00 0.00 4.20
1127 1316 2.756283 AACGCGAGGAGGAGAGGG 60.756 66.667 15.93 0.00 0.00 4.30
1128 1317 2.776913 GGAACGCGAGGAGGAGAGG 61.777 68.421 15.93 0.00 0.00 3.69
1129 1318 2.802106 GGAACGCGAGGAGGAGAG 59.198 66.667 15.93 0.00 0.00 3.20
1161 1350 1.009997 ATCAAGCCATGAAAGGGGGA 58.990 50.000 0.00 0.00 42.54 4.81
1209 1398 0.976641 AGATCCAGAACACCTGCGAA 59.023 50.000 0.00 0.00 41.57 4.70
1463 1671 6.558775 AGGACTATGGATGGTATCAAGCTAAA 59.441 38.462 0.00 0.00 0.00 1.85
1483 1691 9.964354 TTATGCAATAATATAGCAATGAGGACT 57.036 29.630 0.00 0.00 42.15 3.85
1506 1714 5.291614 CCGCTGTAATTGCTTGCAAAATTAT 59.708 36.000 15.77 0.60 32.47 1.28
1518 1726 5.173854 GCATAGAAAATTCCGCTGTAATTGC 59.826 40.000 0.00 0.00 0.00 3.56
1696 1908 5.376854 AAGATGACAGCCATTGTTAACAC 57.623 39.130 8.07 0.00 41.05 3.32
1935 2147 8.297470 ACAAATATTACGTTACAGAGGGAGTA 57.703 34.615 0.00 0.00 0.00 2.59
1936 2148 7.179076 ACAAATATTACGTTACAGAGGGAGT 57.821 36.000 0.00 0.00 0.00 3.85
1937 2149 6.417044 CGACAAATATTACGTTACAGAGGGAG 59.583 42.308 0.00 0.00 0.00 4.30
1938 2150 6.267817 CGACAAATATTACGTTACAGAGGGA 58.732 40.000 0.00 0.00 0.00 4.20
1939 2151 5.051240 GCGACAAATATTACGTTACAGAGGG 60.051 44.000 0.00 0.00 0.00 4.30
1940 2152 5.747197 AGCGACAAATATTACGTTACAGAGG 59.253 40.000 0.00 0.00 0.00 3.69
1941 2153 6.291637 CCAGCGACAAATATTACGTTACAGAG 60.292 42.308 0.00 0.00 0.00 3.35
1942 2154 5.517411 CCAGCGACAAATATTACGTTACAGA 59.483 40.000 0.00 0.00 0.00 3.41
1943 2155 5.517411 TCCAGCGACAAATATTACGTTACAG 59.483 40.000 0.00 0.00 0.00 2.74
1944 2156 5.409211 TCCAGCGACAAATATTACGTTACA 58.591 37.500 0.00 0.00 0.00 2.41
1945 2157 5.517770 ACTCCAGCGACAAATATTACGTTAC 59.482 40.000 0.00 0.04 0.00 2.50
1946 2158 5.653507 ACTCCAGCGACAAATATTACGTTA 58.346 37.500 0.00 0.00 0.00 3.18
1947 2159 4.501071 ACTCCAGCGACAAATATTACGTT 58.499 39.130 0.00 3.50 0.00 3.99
1948 2160 4.119442 ACTCCAGCGACAAATATTACGT 57.881 40.909 0.00 0.00 0.00 3.57
1949 2161 4.148348 GCTACTCCAGCGACAAATATTACG 59.852 45.833 0.00 0.00 41.37 3.18
1950 2162 5.577860 GCTACTCCAGCGACAAATATTAC 57.422 43.478 0.00 0.00 41.37 1.89
1983 2195 6.223852 ACCATAATATTTGTCGCTGGAGTAG 58.776 40.000 0.00 0.00 0.00 2.57
1984 2196 6.169557 ACCATAATATTTGTCGCTGGAGTA 57.830 37.500 0.00 0.00 0.00 2.59
1985 2197 5.036117 ACCATAATATTTGTCGCTGGAGT 57.964 39.130 0.00 0.00 0.00 3.85
1986 2198 5.989168 TGTACCATAATATTTGTCGCTGGAG 59.011 40.000 0.00 0.00 0.00 3.86
1987 2199 5.919755 TGTACCATAATATTTGTCGCTGGA 58.080 37.500 0.00 0.00 0.00 3.86
1988 2200 5.989168 TCTGTACCATAATATTTGTCGCTGG 59.011 40.000 0.00 0.00 0.00 4.85
1989 2201 6.146184 CCTCTGTACCATAATATTTGTCGCTG 59.854 42.308 0.00 0.00 0.00 5.18
1990 2202 6.223852 CCTCTGTACCATAATATTTGTCGCT 58.776 40.000 0.00 0.00 0.00 4.93
1991 2203 5.408604 CCCTCTGTACCATAATATTTGTCGC 59.591 44.000 0.00 0.00 0.00 5.19
1992 2204 6.755206 TCCCTCTGTACCATAATATTTGTCG 58.245 40.000 0.00 0.00 0.00 4.35
1993 2205 7.736893 ACTCCCTCTGTACCATAATATTTGTC 58.263 38.462 0.00 0.00 0.00 3.18
1994 2206 7.691993 ACTCCCTCTGTACCATAATATTTGT 57.308 36.000 0.00 0.00 0.00 2.83
1999 2211 8.154856 GCATTTTACTCCCTCTGTACCATAATA 58.845 37.037 0.00 0.00 0.00 0.98
2000 2212 6.998673 GCATTTTACTCCCTCTGTACCATAAT 59.001 38.462 0.00 0.00 0.00 1.28
2001 2213 6.069905 TGCATTTTACTCCCTCTGTACCATAA 60.070 38.462 0.00 0.00 0.00 1.90
2002 2214 5.427157 TGCATTTTACTCCCTCTGTACCATA 59.573 40.000 0.00 0.00 0.00 2.74
2003 2215 4.227300 TGCATTTTACTCCCTCTGTACCAT 59.773 41.667 0.00 0.00 0.00 3.55
2004 2216 3.585289 TGCATTTTACTCCCTCTGTACCA 59.415 43.478 0.00 0.00 0.00 3.25
2005 2217 4.192317 CTGCATTTTACTCCCTCTGTACC 58.808 47.826 0.00 0.00 0.00 3.34
2006 2218 4.833390 ACTGCATTTTACTCCCTCTGTAC 58.167 43.478 0.00 0.00 0.00 2.90
2007 2219 4.081087 GGACTGCATTTTACTCCCTCTGTA 60.081 45.833 0.00 0.00 0.00 2.74
2008 2220 3.307762 GGACTGCATTTTACTCCCTCTGT 60.308 47.826 0.00 0.00 0.00 3.41
2009 2221 3.054802 AGGACTGCATTTTACTCCCTCTG 60.055 47.826 0.00 0.00 0.00 3.35
2010 2222 3.185455 AGGACTGCATTTTACTCCCTCT 58.815 45.455 0.00 0.00 0.00 3.69
2011 2223 3.636153 AGGACTGCATTTTACTCCCTC 57.364 47.619 0.00 0.00 0.00 4.30
2012 2224 3.118223 GCTAGGACTGCATTTTACTCCCT 60.118 47.826 0.00 0.00 0.00 4.20
2013 2225 3.118223 AGCTAGGACTGCATTTTACTCCC 60.118 47.826 0.00 0.00 0.00 4.30
2014 2226 4.143986 AGCTAGGACTGCATTTTACTCC 57.856 45.455 0.00 0.00 0.00 3.85
2015 2227 6.819146 AGTTTAGCTAGGACTGCATTTTACTC 59.181 38.462 10.13 0.00 0.00 2.59
2016 2228 6.595716 CAGTTTAGCTAGGACTGCATTTTACT 59.404 38.462 19.90 0.00 34.97 2.24
2017 2229 6.371825 ACAGTTTAGCTAGGACTGCATTTTAC 59.628 38.462 26.59 0.00 43.44 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.