Multiple sequence alignment - TraesCS7A01G231000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G231000 chr7A 100.000 5380 0 0 1 5380 201547862 201542483 0.000000e+00 9936.0
1 TraesCS7A01G231000 chr7A 97.613 419 8 1 2172 2590 518510275 518509859 0.000000e+00 717.0
2 TraesCS7A01G231000 chr7D 92.373 2111 135 19 49 2141 192162735 192160633 0.000000e+00 2983.0
3 TraesCS7A01G231000 chr7D 93.787 1352 63 10 3930 5266 192159371 192158026 0.000000e+00 2012.0
4 TraesCS7A01G231000 chr7D 90.530 264 21 4 3671 3931 192159684 192159422 3.990000e-91 346.0
5 TraesCS7A01G231000 chr7D 84.211 361 38 9 3335 3678 192160572 192160214 3.110000e-87 333.0
6 TraesCS7A01G231000 chr7D 75.107 466 78 22 2672 3117 575922874 575923321 3.310000e-42 183.0
7 TraesCS7A01G231000 chr7D 92.784 97 6 1 3124 3219 587163568 587163664 7.270000e-29 139.0
8 TraesCS7A01G231000 chr7D 95.455 88 3 1 3126 3213 587163901 587163987 7.270000e-29 139.0
9 TraesCS7A01G231000 chr7B 91.235 1449 95 17 701 2141 337642693 337641269 0.000000e+00 1943.0
10 TraesCS7A01G231000 chr7B 92.480 1343 90 9 3930 5266 337640546 337639209 0.000000e+00 1910.0
11 TraesCS7A01G231000 chr7B 92.413 659 38 4 1 655 337643339 337642689 0.000000e+00 929.0
12 TraesCS7A01G231000 chr7B 88.006 617 49 14 3335 3931 337641208 337640597 0.000000e+00 706.0
13 TraesCS7A01G231000 chr7B 96.809 94 2 1 3124 3216 657559626 657559719 7.210000e-34 156.0
14 TraesCS7A01G231000 chr3B 88.494 1069 61 30 2168 3224 224962960 224961942 0.000000e+00 1236.0
15 TraesCS7A01G231000 chr2B 96.176 706 22 3 2174 2879 793375283 793374583 0.000000e+00 1149.0
16 TraesCS7A01G231000 chr2B 93.675 585 30 4 2162 2746 691398816 691399393 0.000000e+00 869.0
17 TraesCS7A01G231000 chr2B 94.819 193 7 2 2864 3054 793374565 793374374 1.130000e-76 298.0
18 TraesCS7A01G231000 chr2B 87.903 248 21 6 2834 3075 691399388 691399632 3.170000e-72 283.0
19 TraesCS7A01G231000 chr2B 96.703 91 3 0 3121 3211 793374349 793374259 9.330000e-33 152.0
20 TraesCS7A01G231000 chr2B 94.845 97 3 2 3133 3228 668049117 668049212 3.360000e-32 150.0
21 TraesCS7A01G231000 chr2B 97.297 37 1 0 3052 3088 793374388 793374352 4.500000e-06 63.9
22 TraesCS7A01G231000 chr6A 98.039 612 11 1 2171 2782 20017602 20016992 0.000000e+00 1062.0
23 TraesCS7A01G231000 chr6A 94.912 452 23 0 2777 3228 20008087 20007636 0.000000e+00 708.0
24 TraesCS7A01G231000 chr6B 88.208 865 84 9 2171 3027 583880578 583879724 0.000000e+00 1016.0
25 TraesCS7A01G231000 chr1A 84.830 1002 93 26 2160 3129 154007276 154006302 0.000000e+00 953.0
26 TraesCS7A01G231000 chr3D 95.991 424 12 3 2171 2594 52433463 52433045 0.000000e+00 684.0
27 TraesCS7A01G231000 chr3D 95.565 248 9 1 2631 2878 52433048 52432803 3.910000e-106 396.0
28 TraesCS7A01G231000 chr1D 92.092 392 28 3 2172 2563 42021239 42020851 2.830000e-152 549.0
29 TraesCS7A01G231000 chr1D 90.801 337 28 2 2561 2897 42020621 42020288 1.060000e-121 448.0
30 TraesCS7A01G231000 chr4A 87.297 370 27 10 2674 3027 661533266 661532901 6.490000e-109 405.0
31 TraesCS7A01G231000 chr4A 89.958 239 17 5 2483 2716 661533512 661533276 8.760000e-78 302.0
32 TraesCS7A01G231000 chr4A 96.667 90 1 1 3133 3222 663206631 663206544 1.210000e-31 148.0
33 TraesCS7A01G231000 chr5B 82.297 209 29 7 2672 2879 681176062 681175861 1.990000e-39 174.0
34 TraesCS7A01G231000 chr5A 96.739 92 3 0 3133 3224 633502960 633502869 2.590000e-33 154.0
35 TraesCS7A01G231000 chr4B 96.552 87 2 1 3124 3210 621702887 621702802 5.620000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G231000 chr7A 201542483 201547862 5379 True 9936.000 9936 100.00000 1 5380 1 chr7A.!!$R1 5379
1 TraesCS7A01G231000 chr7D 192158026 192162735 4709 True 1418.500 2983 90.22525 49 5266 4 chr7D.!!$R1 5217
2 TraesCS7A01G231000 chr7B 337639209 337643339 4130 True 1372.000 1943 91.03350 1 5266 4 chr7B.!!$R1 5265
3 TraesCS7A01G231000 chr3B 224961942 224962960 1018 True 1236.000 1236 88.49400 2168 3224 1 chr3B.!!$R1 1056
4 TraesCS7A01G231000 chr2B 691398816 691399632 816 False 576.000 869 90.78900 2162 3075 2 chr2B.!!$F2 913
5 TraesCS7A01G231000 chr2B 793374259 793375283 1024 True 415.725 1149 96.24875 2174 3211 4 chr2B.!!$R1 1037
6 TraesCS7A01G231000 chr6A 20016992 20017602 610 True 1062.000 1062 98.03900 2171 2782 1 chr6A.!!$R2 611
7 TraesCS7A01G231000 chr6B 583879724 583880578 854 True 1016.000 1016 88.20800 2171 3027 1 chr6B.!!$R1 856
8 TraesCS7A01G231000 chr1A 154006302 154007276 974 True 953.000 953 84.83000 2160 3129 1 chr1A.!!$R1 969
9 TraesCS7A01G231000 chr3D 52432803 52433463 660 True 540.000 684 95.77800 2171 2878 2 chr3D.!!$R1 707
10 TraesCS7A01G231000 chr1D 42020288 42021239 951 True 498.500 549 91.44650 2172 2897 2 chr1D.!!$R1 725
11 TraesCS7A01G231000 chr4A 661532901 661533512 611 True 353.500 405 88.62750 2483 3027 2 chr4A.!!$R2 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
320 326 1.201780 GCTCCTAAAAGAACGCGTTCG 60.202 52.381 37.76 25.97 43.97 3.95 F
614 627 1.537202 ACCTTTTGTGAGCTCGAATGC 59.463 47.619 9.64 0.00 0.00 3.56 F
1286 1306 0.176449 GGAATGCACATGCCCCTTTC 59.824 55.000 0.49 0.24 41.18 2.62 F
1441 1463 0.310543 TGCATTTCTGTCACAACGGC 59.689 50.000 0.00 0.00 0.00 5.68 F
3045 3446 0.391263 GACTTCCGGATCGTTGCCTT 60.391 55.000 4.15 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1153 1173 0.108138 GCGCCCTGTCTATGAACACT 60.108 55.0 0.0 0.0 0.00 3.55 R
2339 2369 0.033109 GGATTGGGCTAAGGGCACTT 60.033 55.0 6.4 6.4 46.25 3.16 R
3046 3447 0.314935 CAACCAACGAGGCAAGCAAT 59.685 50.0 0.0 0.0 43.14 3.56 R
3047 3448 0.749818 TCAACCAACGAGGCAAGCAA 60.750 50.0 0.0 0.0 43.14 3.91 R
4861 5934 0.107017 AACACAGCAGGAACAGCAGT 60.107 50.0 0.0 0.0 45.86 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 1.856920 CCTTCCTCTAGTCTCCCCTCT 59.143 57.143 0.00 0.00 0.00 3.69
205 208 4.874966 CCAGTCTCATCCATTTCTTGTCTC 59.125 45.833 0.00 0.00 0.00 3.36
235 238 5.451937 GGTGAGAAAGAACCCTTCCTTTTTG 60.452 44.000 0.00 0.00 33.23 2.44
236 239 4.649218 TGAGAAAGAACCCTTCCTTTTTGG 59.351 41.667 0.00 0.00 33.23 3.28
313 319 3.596214 TGATCACCGCTCCTAAAAGAAC 58.404 45.455 0.00 0.00 0.00 3.01
320 326 1.201780 GCTCCTAAAAGAACGCGTTCG 60.202 52.381 37.76 25.97 43.97 3.95
373 379 7.770897 TCCTCTTTATAGGTTTGCTTCTTGATC 59.229 37.037 0.00 0.00 37.91 2.92
397 403 9.717942 ATCTGTTGATTAATTACTCATCCTAGC 57.282 33.333 6.37 0.00 0.00 3.42
398 404 7.867909 TCTGTTGATTAATTACTCATCCTAGCG 59.132 37.037 6.37 0.00 0.00 4.26
399 405 7.722363 TGTTGATTAATTACTCATCCTAGCGA 58.278 34.615 6.37 0.00 0.00 4.93
400 406 7.867909 TGTTGATTAATTACTCATCCTAGCGAG 59.132 37.037 6.37 1.67 35.30 5.03
493 506 8.325787 TGGAGCTGGTCAGAATAAACTATTTTA 58.674 33.333 9.30 0.00 0.00 1.52
533 546 5.868801 GCAGAATATCATCTCTTCTACCTGC 59.131 44.000 0.00 0.00 35.96 4.85
538 551 9.113838 GAATATCATCTCTTCTACCTGCAAAAA 57.886 33.333 0.00 0.00 0.00 1.94
542 555 7.114754 TCATCTCTTCTACCTGCAAAAATGAT 58.885 34.615 0.00 0.00 0.00 2.45
614 627 1.537202 ACCTTTTGTGAGCTCGAATGC 59.463 47.619 9.64 0.00 0.00 3.56
658 671 9.887406 AAAATCAAATCTTGTGAATTTTGATGC 57.113 25.926 9.69 0.00 44.05 3.91
669 682 7.613585 TGTGAATTTTGATGCCTTGATGTTAT 58.386 30.769 0.00 0.00 0.00 1.89
671 684 9.585099 GTGAATTTTGATGCCTTGATGTTATAA 57.415 29.630 0.00 0.00 0.00 0.98
727 746 4.381079 GGTTCTGCTCTCGAGTAATTGTCT 60.381 45.833 13.13 0.00 0.00 3.41
728 747 4.362932 TCTGCTCTCGAGTAATTGTCTG 57.637 45.455 13.13 0.30 0.00 3.51
729 748 4.010349 TCTGCTCTCGAGTAATTGTCTGA 58.990 43.478 13.13 2.45 0.00 3.27
730 749 4.095632 TCTGCTCTCGAGTAATTGTCTGAG 59.904 45.833 13.13 0.00 0.00 3.35
754 773 4.734398 ACTGTATTCTCTTGGCTCTGAG 57.266 45.455 0.00 0.00 0.00 3.35
755 774 4.093011 ACTGTATTCTCTTGGCTCTGAGT 58.907 43.478 6.53 0.00 0.00 3.41
892 912 5.068198 TGTGCATTTTGCTTTCTCTCTTCTT 59.932 36.000 0.00 0.00 45.31 2.52
945 965 3.519107 TCATTACCTGCAGGAATCTGTGA 59.481 43.478 39.19 25.84 42.78 3.58
955 975 4.151157 GCAGGAATCTGTGAAATTTTGTGC 59.849 41.667 0.00 0.00 42.78 4.57
1150 1170 2.031682 GCAGTGTGACTTGCGAATCTTT 60.032 45.455 0.00 0.00 0.00 2.52
1153 1173 3.876914 AGTGTGACTTGCGAATCTTTTCA 59.123 39.130 0.00 0.00 0.00 2.69
1171 1191 1.204704 TCAGTGTTCATAGACAGGGCG 59.795 52.381 0.00 0.00 0.00 6.13
1215 1235 7.725397 TCATGGCCAAAATATACTCTGCTAATT 59.275 33.333 10.96 0.00 0.00 1.40
1219 1239 9.231297 GGCCAAAATATACTCTGCTAATTATCA 57.769 33.333 0.00 0.00 0.00 2.15
1228 1248 5.163364 ACTCTGCTAATTATCAGTCCTGGTG 60.163 44.000 14.33 0.00 0.00 4.17
1229 1249 4.962362 TCTGCTAATTATCAGTCCTGGTGA 59.038 41.667 14.33 0.00 0.00 4.02
1233 1253 6.543465 TGCTAATTATCAGTCCTGGTGAAATG 59.457 38.462 0.00 0.00 0.00 2.32
1246 1266 3.118112 TGGTGAAATGTTTGGCCAATGTT 60.118 39.130 21.26 11.63 0.00 2.71
1260 1280 4.244862 GCCAATGTTTGTATGGTTTCCAG 58.755 43.478 0.00 0.00 36.75 3.86
1264 1284 6.423604 CCAATGTTTGTATGGTTTCCAGTTTC 59.576 38.462 0.00 0.00 36.75 2.78
1286 1306 0.176449 GGAATGCACATGCCCCTTTC 59.824 55.000 0.49 0.24 41.18 2.62
1288 1308 2.229690 AATGCACATGCCCCTTTCGC 62.230 55.000 0.49 0.00 41.18 4.70
1290 1310 1.748879 GCACATGCCCCTTTCGCTA 60.749 57.895 0.00 0.00 34.31 4.26
1293 1313 1.077787 CATGCCCCTTTCGCTACCA 60.078 57.895 0.00 0.00 0.00 3.25
1329 1349 2.451490 TGCTTAAATTGGCCGAATCCA 58.549 42.857 0.00 0.00 0.00 3.41
1373 1393 7.745620 ACCAAATTCTTGTAAGGTAGACTTG 57.254 36.000 0.00 0.00 40.37 3.16
1376 1396 3.975168 TCTTGTAAGGTAGACTTGGGC 57.025 47.619 0.00 0.00 40.37 5.36
1387 1407 0.310854 GACTTGGGCTCAAACCAACG 59.689 55.000 0.00 0.00 42.75 4.10
1388 1408 1.007387 CTTGGGCTCAAACCAACGC 60.007 57.895 0.00 0.00 42.75 4.84
1389 1409 1.454847 TTGGGCTCAAACCAACGCT 60.455 52.632 0.00 0.00 42.75 5.07
1397 1419 3.062774 GCTCAAACCAACGCTCTATCTTC 59.937 47.826 0.00 0.00 0.00 2.87
1435 1457 6.199937 ACTTGGATATTGCATTTCTGTCAC 57.800 37.500 0.00 0.00 0.00 3.67
1439 1461 5.030295 GGATATTGCATTTCTGTCACAACG 58.970 41.667 0.00 0.00 0.00 4.10
1441 1463 0.310543 TGCATTTCTGTCACAACGGC 59.689 50.000 0.00 0.00 0.00 5.68
1460 1482 3.057736 CGGCGATATATCCGTAATAGGGG 60.058 52.174 0.00 0.00 40.72 4.79
1496 1518 6.713762 TGCTTCATGTTCTAAATATTGGGG 57.286 37.500 0.00 0.00 0.00 4.96
1519 1542 4.269363 GGGAAAATAACGGTGTGATAGACG 59.731 45.833 0.00 0.00 0.00 4.18
1520 1543 4.866486 GGAAAATAACGGTGTGATAGACGT 59.134 41.667 0.00 0.00 41.88 4.34
1521 1544 5.220340 GGAAAATAACGGTGTGATAGACGTG 60.220 44.000 0.00 0.00 39.76 4.49
1522 1545 4.445452 AATAACGGTGTGATAGACGTGT 57.555 40.909 0.00 0.00 39.76 4.49
1524 1547 2.342910 ACGGTGTGATAGACGTGTTC 57.657 50.000 0.00 0.00 38.24 3.18
1526 1549 1.068125 CGGTGTGATAGACGTGTTCCA 60.068 52.381 0.00 0.00 0.00 3.53
1527 1550 2.608506 CGGTGTGATAGACGTGTTCCAA 60.609 50.000 0.00 0.00 0.00 3.53
1529 1552 4.000988 GGTGTGATAGACGTGTTCCAAAT 58.999 43.478 0.00 0.00 0.00 2.32
1530 1553 5.172934 GGTGTGATAGACGTGTTCCAAATA 58.827 41.667 0.00 0.00 0.00 1.40
1579 1604 4.141574 ACAGTTCTCGCCTAGACTCTAGAT 60.142 45.833 13.90 0.00 32.51 1.98
1582 1607 6.653320 CAGTTCTCGCCTAGACTCTAGATTAT 59.347 42.308 13.90 0.00 32.51 1.28
1584 1609 7.722285 AGTTCTCGCCTAGACTCTAGATTATTT 59.278 37.037 13.90 0.00 32.51 1.40
1693 1718 7.599621 TCAGCAATTAATTGAAACTGTTCATGG 59.400 33.333 28.33 5.99 43.29 3.66
1706 1731 3.146066 TGTTCATGGTTCCCTTTTCTCG 58.854 45.455 0.00 0.00 0.00 4.04
1733 1758 5.302568 AGAAAAGGTTGTCAGCAATCATTGA 59.697 36.000 0.00 0.00 38.15 2.57
1823 1848 3.057526 ACCTGCGTTGGAGCTAATTTTTC 60.058 43.478 2.95 0.00 38.13 2.29
1825 1850 4.380867 CCTGCGTTGGAGCTAATTTTTCAT 60.381 41.667 0.00 0.00 38.13 2.57
1897 1923 7.795047 TCATGTATGATGTATTCCTCACTTGT 58.205 34.615 0.00 0.00 0.00 3.16
1904 1930 9.685276 ATGATGTATTCCTCACTTGTTTTATGA 57.315 29.630 0.00 0.00 0.00 2.15
1908 1934 5.689383 TTCCTCACTTGTTTTATGACTGC 57.311 39.130 0.00 0.00 0.00 4.40
1914 1940 8.892723 CCTCACTTGTTTTATGACTGCAATATA 58.107 33.333 0.00 0.00 0.00 0.86
1915 1941 9.926751 CTCACTTGTTTTATGACTGCAATATAG 57.073 33.333 0.00 0.00 0.00 1.31
1916 1942 9.448438 TCACTTGTTTTATGACTGCAATATAGT 57.552 29.630 0.00 0.00 0.00 2.12
1941 1967 9.803315 GTTTCATTATACTGTATCTGTCTGACA 57.197 33.333 10.50 10.50 0.00 3.58
1966 1992 8.607459 CAACATCAGACTTGATACCTTTCATAC 58.393 37.037 0.00 0.00 42.12 2.39
1994 2020 9.693739 AATATATTATGTGTGTCTTGGGTTTCA 57.306 29.630 0.00 0.00 0.00 2.69
2008 2034 3.450457 TGGGTTTCAACTTTCTGCATTGT 59.550 39.130 0.00 0.00 0.00 2.71
2059 2086 4.916041 TGGGAATCTGATGAGAACAAGT 57.084 40.909 0.00 0.00 0.00 3.16
2060 2087 4.836825 TGGGAATCTGATGAGAACAAGTC 58.163 43.478 0.00 0.00 0.00 3.01
2075 2102 4.175787 ACAAGTCGTATTCCACTGAGTC 57.824 45.455 0.00 0.00 0.00 3.36
2102 2129 5.988561 TGGCAGTTGTGGTTTGAAATATTTC 59.011 36.000 19.37 19.37 37.69 2.17
2107 2134 9.480053 CAGTTGTGGTTTGAAATATTTCTGATT 57.520 29.630 24.77 0.00 38.02 2.57
2141 2168 8.772705 CAGAATGAAATGCTTAGGTAGATCTTC 58.227 37.037 0.00 0.00 39.69 2.87
2143 2170 6.222038 TGAAATGCTTAGGTAGATCTTCGT 57.778 37.500 0.00 0.00 0.00 3.85
2144 2171 6.640518 TGAAATGCTTAGGTAGATCTTCGTT 58.359 36.000 0.00 0.00 0.00 3.85
2147 2174 6.910536 ATGCTTAGGTAGATCTTCGTTTTG 57.089 37.500 0.00 0.00 0.00 2.44
2149 2176 6.228258 TGCTTAGGTAGATCTTCGTTTTGTT 58.772 36.000 0.00 0.00 0.00 2.83
2151 2178 7.874016 TGCTTAGGTAGATCTTCGTTTTGTTAA 59.126 33.333 0.00 0.00 0.00 2.01
2152 2179 8.381387 GCTTAGGTAGATCTTCGTTTTGTTAAG 58.619 37.037 0.00 0.00 0.00 1.85
2153 2180 9.420551 CTTAGGTAGATCTTCGTTTTGTTAAGT 57.579 33.333 0.00 0.00 0.00 2.24
2156 2183 9.768662 AGGTAGATCTTCGTTTTGTTAAGTTAA 57.231 29.630 0.00 0.00 0.00 2.01
2995 3391 0.826715 CTGCTACTGCTAGCCCAGAA 59.173 55.000 13.29 0.00 44.45 3.02
3027 3428 1.464376 GCCTGCTACCGCTAGATGGA 61.464 60.000 8.32 0.00 36.97 3.41
3039 3440 2.231529 CTAGATGGACTTCCGGATCGT 58.768 52.381 4.15 5.67 39.43 3.73
3040 3441 1.486211 AGATGGACTTCCGGATCGTT 58.514 50.000 4.15 0.00 39.43 3.85
3041 3442 1.137086 AGATGGACTTCCGGATCGTTG 59.863 52.381 4.15 0.00 39.43 4.10
3042 3443 0.462047 ATGGACTTCCGGATCGTTGC 60.462 55.000 4.15 0.00 39.43 4.17
3043 3444 1.814169 GGACTTCCGGATCGTTGCC 60.814 63.158 4.15 0.58 0.00 4.52
3044 3445 1.218316 GACTTCCGGATCGTTGCCT 59.782 57.895 4.15 0.00 0.00 4.75
3045 3446 0.391263 GACTTCCGGATCGTTGCCTT 60.391 55.000 4.15 0.00 0.00 4.35
3046 3447 0.899720 ACTTCCGGATCGTTGCCTTA 59.100 50.000 4.15 0.00 0.00 2.69
3047 3448 1.485066 ACTTCCGGATCGTTGCCTTAT 59.515 47.619 4.15 0.00 0.00 1.73
3048 3449 2.093128 ACTTCCGGATCGTTGCCTTATT 60.093 45.455 4.15 0.00 0.00 1.40
3049 3450 1.948104 TCCGGATCGTTGCCTTATTG 58.052 50.000 0.00 0.00 0.00 1.90
3050 3451 0.307760 CCGGATCGTTGCCTTATTGC 59.692 55.000 0.00 0.00 0.00 3.56
3095 3508 3.309296 TCCAATTGGTTTAAACTGGGCA 58.691 40.909 23.76 7.48 36.34 5.36
3114 3527 3.206964 GCAAGTAAGGAGGCAGGATAAC 58.793 50.000 0.00 0.00 0.00 1.89
3117 3530 2.959707 AGTAAGGAGGCAGGATAACGAG 59.040 50.000 0.00 0.00 0.00 4.18
3129 3542 2.277316 GGATAACGAGCGTACACGAAAC 59.723 50.000 5.84 0.00 43.02 2.78
3242 3695 9.908747 ATAGATATAGATCTGTGGTACTGGTAC 57.091 37.037 10.17 2.58 42.66 3.34
3243 3696 7.756614 AGATATAGATCTGTGGTACTGGTACA 58.243 38.462 5.18 0.00 41.12 2.90
3244 3697 8.394822 AGATATAGATCTGTGGTACTGGTACAT 58.605 37.037 5.18 0.00 41.12 2.29
3245 3698 9.682465 GATATAGATCTGTGGTACTGGTACATA 57.318 37.037 5.18 0.00 38.20 2.29
3249 3702 8.179509 AGATCTGTGGTACTGGTACATATAAC 57.820 38.462 12.14 4.06 38.20 1.89
3250 3703 8.005388 AGATCTGTGGTACTGGTACATATAACT 58.995 37.037 12.14 2.12 38.20 2.24
3251 3704 7.966339 TCTGTGGTACTGGTACATATAACTT 57.034 36.000 12.14 0.00 38.20 2.66
3252 3705 8.370266 TCTGTGGTACTGGTACATATAACTTT 57.630 34.615 12.14 0.00 38.20 2.66
3253 3706 8.818860 TCTGTGGTACTGGTACATATAACTTTT 58.181 33.333 12.14 0.00 38.20 2.27
3256 3709 9.038803 GTGGTACTGGTACATATAACTTTTAGC 57.961 37.037 12.14 0.00 38.20 3.09
3257 3710 8.984855 TGGTACTGGTACATATAACTTTTAGCT 58.015 33.333 12.14 0.00 38.20 3.32
3275 3728 9.974750 CTTTTAGCTATAACTAGTTTGTGAAGC 57.025 33.333 14.49 14.47 0.00 3.86
3276 3729 9.496873 TTTTAGCTATAACTAGTTTGTGAAGCA 57.503 29.630 14.49 0.00 0.00 3.91
3277 3730 9.667107 TTTAGCTATAACTAGTTTGTGAAGCAT 57.333 29.630 14.49 0.94 0.00 3.79
3278 3731 9.667107 TTAGCTATAACTAGTTTGTGAAGCATT 57.333 29.630 14.49 4.45 0.00 3.56
3279 3732 8.567285 AGCTATAACTAGTTTGTGAAGCATTT 57.433 30.769 14.49 0.00 0.00 2.32
3280 3733 8.669243 AGCTATAACTAGTTTGTGAAGCATTTC 58.331 33.333 14.49 0.00 0.00 2.17
3281 3734 7.910683 GCTATAACTAGTTTGTGAAGCATTTCC 59.089 37.037 14.49 0.00 32.09 3.13
3282 3735 4.749245 ACTAGTTTGTGAAGCATTTCCG 57.251 40.909 0.00 0.00 32.09 4.30
3283 3736 4.134563 ACTAGTTTGTGAAGCATTTCCGT 58.865 39.130 0.00 0.00 32.09 4.69
3284 3737 4.578928 ACTAGTTTGTGAAGCATTTCCGTT 59.421 37.500 0.00 0.00 32.09 4.44
3285 3738 3.964909 AGTTTGTGAAGCATTTCCGTTC 58.035 40.909 0.00 0.00 32.09 3.95
3286 3739 3.049912 GTTTGTGAAGCATTTCCGTTCC 58.950 45.455 0.00 0.00 32.09 3.62
3287 3740 2.270352 TGTGAAGCATTTCCGTTCCT 57.730 45.000 0.00 0.00 32.09 3.36
3288 3741 3.410631 TGTGAAGCATTTCCGTTCCTA 57.589 42.857 0.00 0.00 32.09 2.94
3289 3742 3.745799 TGTGAAGCATTTCCGTTCCTAA 58.254 40.909 0.00 0.00 32.09 2.69
3290 3743 4.138290 TGTGAAGCATTTCCGTTCCTAAA 58.862 39.130 0.00 0.00 32.09 1.85
3291 3744 4.215399 TGTGAAGCATTTCCGTTCCTAAAG 59.785 41.667 0.00 0.00 32.09 1.85
3292 3745 4.215613 GTGAAGCATTTCCGTTCCTAAAGT 59.784 41.667 0.00 0.00 32.09 2.66
3293 3746 5.410439 GTGAAGCATTTCCGTTCCTAAAGTA 59.590 40.000 0.00 0.00 32.09 2.24
3294 3747 6.093633 GTGAAGCATTTCCGTTCCTAAAGTAT 59.906 38.462 0.00 0.00 32.09 2.12
3295 3748 6.657541 TGAAGCATTTCCGTTCCTAAAGTATT 59.342 34.615 0.00 0.00 32.09 1.89
3296 3749 7.175990 TGAAGCATTTCCGTTCCTAAAGTATTT 59.824 33.333 0.00 0.00 35.78 1.40
3297 3750 7.462571 AGCATTTCCGTTCCTAAAGTATTTT 57.537 32.000 0.00 0.00 40.09 1.82
3298 3751 7.535997 AGCATTTCCGTTCCTAAAGTATTTTC 58.464 34.615 0.00 0.00 40.09 2.29
3299 3752 6.750501 GCATTTCCGTTCCTAAAGTATTTTCC 59.249 38.462 0.00 0.00 40.09 3.13
3300 3753 7.576098 GCATTTCCGTTCCTAAAGTATTTTCCA 60.576 37.037 0.00 0.00 40.09 3.53
3301 3754 7.820578 TTTCCGTTCCTAAAGTATTTTCCAA 57.179 32.000 0.00 0.00 40.09 3.53
3302 3755 8.411991 TTTCCGTTCCTAAAGTATTTTCCAAT 57.588 30.769 0.00 0.00 40.09 3.16
3303 3756 8.411991 TTCCGTTCCTAAAGTATTTTCCAATT 57.588 30.769 0.00 0.00 40.09 2.32
3304 3757 8.047413 TCCGTTCCTAAAGTATTTTCCAATTC 57.953 34.615 0.00 0.00 40.09 2.17
3305 3758 6.964934 CCGTTCCTAAAGTATTTTCCAATTCG 59.035 38.462 0.00 0.00 40.09 3.34
3306 3759 6.468000 CGTTCCTAAAGTATTTTCCAATTCGC 59.532 38.462 0.00 0.00 40.09 4.70
3307 3760 7.309920 GTTCCTAAAGTATTTTCCAATTCGCA 58.690 34.615 0.00 0.00 40.09 5.10
3308 3761 6.848451 TCCTAAAGTATTTTCCAATTCGCAC 58.152 36.000 0.00 0.00 40.09 5.34
3309 3762 6.657541 TCCTAAAGTATTTTCCAATTCGCACT 59.342 34.615 0.00 0.00 40.09 4.40
3310 3763 7.825270 TCCTAAAGTATTTTCCAATTCGCACTA 59.175 33.333 0.00 0.00 40.09 2.74
3311 3764 7.908601 CCTAAAGTATTTTCCAATTCGCACTAC 59.091 37.037 0.00 0.00 40.09 2.73
3312 3765 7.448748 AAAGTATTTTCCAATTCGCACTACT 57.551 32.000 0.00 0.00 31.62 2.57
3313 3766 6.663944 AGTATTTTCCAATTCGCACTACTC 57.336 37.500 0.00 0.00 0.00 2.59
3314 3767 4.965119 ATTTTCCAATTCGCACTACTCC 57.035 40.909 0.00 0.00 0.00 3.85
3315 3768 2.396590 TTCCAATTCGCACTACTCCC 57.603 50.000 0.00 0.00 0.00 4.30
3316 3769 1.568504 TCCAATTCGCACTACTCCCT 58.431 50.000 0.00 0.00 0.00 4.20
3317 3770 1.480954 TCCAATTCGCACTACTCCCTC 59.519 52.381 0.00 0.00 0.00 4.30
3318 3771 1.207089 CCAATTCGCACTACTCCCTCA 59.793 52.381 0.00 0.00 0.00 3.86
3319 3772 2.158900 CCAATTCGCACTACTCCCTCAT 60.159 50.000 0.00 0.00 0.00 2.90
3320 3773 2.868583 CAATTCGCACTACTCCCTCATG 59.131 50.000 0.00 0.00 0.00 3.07
3321 3774 1.557099 TTCGCACTACTCCCTCATGT 58.443 50.000 0.00 0.00 0.00 3.21
3322 3775 1.557099 TCGCACTACTCCCTCATGTT 58.443 50.000 0.00 0.00 0.00 2.71
3323 3776 1.899814 TCGCACTACTCCCTCATGTTT 59.100 47.619 0.00 0.00 0.00 2.83
3324 3777 2.002586 CGCACTACTCCCTCATGTTTG 58.997 52.381 0.00 0.00 0.00 2.93
3325 3778 2.612972 CGCACTACTCCCTCATGTTTGT 60.613 50.000 0.00 0.00 0.00 2.83
3326 3779 2.744202 GCACTACTCCCTCATGTTTGTG 59.256 50.000 0.00 0.00 0.00 3.33
3327 3780 3.557054 GCACTACTCCCTCATGTTTGTGA 60.557 47.826 0.00 0.00 0.00 3.58
3328 3781 4.641396 CACTACTCCCTCATGTTTGTGAA 58.359 43.478 0.00 0.00 0.00 3.18
3329 3782 4.452455 CACTACTCCCTCATGTTTGTGAAC 59.548 45.833 0.00 0.00 36.29 3.18
3330 3783 2.863809 ACTCCCTCATGTTTGTGAACC 58.136 47.619 0.00 0.00 34.80 3.62
3331 3784 2.174639 ACTCCCTCATGTTTGTGAACCA 59.825 45.455 0.00 0.00 34.80 3.67
3332 3785 3.181429 ACTCCCTCATGTTTGTGAACCAT 60.181 43.478 0.00 0.00 34.80 3.55
3333 3786 4.042809 ACTCCCTCATGTTTGTGAACCATA 59.957 41.667 0.00 0.00 34.80 2.74
3337 3790 7.178573 TCCCTCATGTTTGTGAACCATAATAA 58.821 34.615 0.00 0.00 34.80 1.40
3341 3794 8.402798 TCATGTTTGTGAACCATAATAAGTGT 57.597 30.769 0.00 0.00 34.80 3.55
3352 3805 6.717289 ACCATAATAAGTGTGACTAGCCAAA 58.283 36.000 0.00 0.00 0.00 3.28
3353 3806 7.172342 ACCATAATAAGTGTGACTAGCCAAAA 58.828 34.615 0.00 0.00 0.00 2.44
3381 3834 4.250116 TGGTTTTTGTGCATGTATGACC 57.750 40.909 0.00 0.00 0.00 4.02
3392 3845 4.582240 TGCATGTATGACCACAAAACTCAA 59.418 37.500 0.00 0.00 30.84 3.02
3480 3947 3.963383 TTGCTTCGAAGAAACTTGGAC 57.037 42.857 28.95 7.94 45.90 4.02
3481 3948 2.912771 TGCTTCGAAGAAACTTGGACA 58.087 42.857 28.95 10.51 45.90 4.02
3488 3955 3.058224 CGAAGAAACTTGGACATGGGAAC 60.058 47.826 0.00 0.00 0.00 3.62
3507 3974 4.335594 GGAACGGGTTCAGATAAAGGAATG 59.664 45.833 13.08 0.00 41.20 2.67
3530 3997 7.539712 TGTTAGTGAAGCTAAATGTCTATGC 57.460 36.000 0.00 0.00 40.94 3.14
3532 3999 5.102953 AGTGAAGCTAAATGTCTATGCCA 57.897 39.130 0.00 0.00 0.00 4.92
3536 4003 5.887598 TGAAGCTAAATGTCTATGCCATGTT 59.112 36.000 0.00 0.00 0.00 2.71
3542 4012 7.645340 GCTAAATGTCTATGCCATGTTTAACTG 59.355 37.037 0.00 0.00 0.00 3.16
3549 4019 2.889678 TGCCATGTTTAACTGTGCATGA 59.110 40.909 0.00 0.00 40.61 3.07
3553 4023 5.288015 CCATGTTTAACTGTGCATGAACAA 58.712 37.500 8.18 0.00 40.61 2.83
3556 4026 7.359431 CCATGTTTAACTGTGCATGAACAATTC 60.359 37.037 3.22 0.00 40.61 2.17
3557 4027 6.804677 TGTTTAACTGTGCATGAACAATTCT 58.195 32.000 3.22 0.00 0.00 2.40
3564 4034 8.340618 ACTGTGCATGAACAATTCTTAGTAAT 57.659 30.769 8.18 0.00 0.00 1.89
3568 4038 7.703621 GTGCATGAACAATTCTTAGTAATGCAT 59.296 33.333 9.42 0.00 43.56 3.96
3569 4039 7.703197 TGCATGAACAATTCTTAGTAATGCATG 59.297 33.333 0.00 0.00 40.24 4.06
3570 4040 7.703621 GCATGAACAATTCTTAGTAATGCATGT 59.296 33.333 0.00 0.00 37.63 3.21
3624 4094 8.525316 TCATTTCTTACGGTCACATAACTTCTA 58.475 33.333 0.00 0.00 0.00 2.10
3635 4105 7.307811 GGTCACATAACTTCTAAACACTTCACC 60.308 40.741 0.00 0.00 0.00 4.02
3642 4112 5.293569 ACTTCTAAACACTTCACCGTGAAAG 59.706 40.000 14.74 12.27 35.73 2.62
3647 4117 5.379732 AACACTTCACCGTGAAAGAAAAA 57.620 34.783 14.74 0.00 35.73 1.94
3688 4695 3.076621 TGCACTCTTGTATTTGGCTGAG 58.923 45.455 0.00 0.00 0.00 3.35
3689 4696 3.077359 GCACTCTTGTATTTGGCTGAGT 58.923 45.455 0.00 0.00 35.48 3.41
3707 4715 2.678336 GAGTTAAGCCGGAGTCAATTGG 59.322 50.000 5.05 0.00 0.00 3.16
3715 4723 3.873910 CCGGAGTCAATTGGTATGTTCT 58.126 45.455 5.42 0.00 0.00 3.01
3716 4724 4.261801 CCGGAGTCAATTGGTATGTTCTT 58.738 43.478 5.42 0.00 0.00 2.52
3747 4755 5.840693 AGGATTTCTTGATGTTTCTTTGGGT 59.159 36.000 0.00 0.00 0.00 4.51
3759 4767 5.010516 TGTTTCTTTGGGTGTGTGGAATATG 59.989 40.000 0.00 0.00 0.00 1.78
3774 4782 9.722056 GTGTGGAATATGACATCTGAAATAAAC 57.278 33.333 0.00 0.00 0.00 2.01
3778 4786 8.004344 GGAATATGACATCTGAAATAAACGACG 58.996 37.037 0.00 0.00 0.00 5.12
3779 4787 8.420374 AATATGACATCTGAAATAAACGACGT 57.580 30.769 0.00 0.00 0.00 4.34
3789 4798 1.626686 TAAACGACGTTAGGGGGTCA 58.373 50.000 14.59 0.00 32.74 4.02
3814 4823 3.191371 GTGAGCCTAAATCACTTGGTTGG 59.809 47.826 0.00 0.00 43.03 3.77
3828 4837 1.203038 TGGTTGGGTGAGTTGATGCAT 60.203 47.619 0.00 0.00 0.00 3.96
3831 4840 1.825090 TGGGTGAGTTGATGCATGAC 58.175 50.000 2.46 2.37 0.00 3.06
3883 4892 4.019681 ACTCGAATGTGGGTTCCTATTTGA 60.020 41.667 0.00 0.00 0.00 2.69
3921 4932 5.520649 GGCTTCTCTAACATCTTTCCTTACG 59.479 44.000 0.00 0.00 0.00 3.18
3925 4936 9.372369 CTTCTCTAACATCTTTCCTTACGAAAT 57.628 33.333 0.00 0.00 39.73 2.17
3972 5038 8.523658 ACTTCAATTTATTTAAGTCAGGCCTTC 58.476 33.333 0.00 0.00 0.00 3.46
4005 5071 3.999663 GCATCATGTCTTCTATACAGGCC 59.000 47.826 0.00 0.00 0.00 5.19
4029 5095 5.106038 CCGTGACTACTTGTTATACCTGTCA 60.106 44.000 0.00 0.00 0.00 3.58
4088 5154 2.028748 TGGAAGCTTACAACGAGGTACC 60.029 50.000 9.54 2.73 0.00 3.34
4108 5174 3.124921 CACAATCGCGACCCACCC 61.125 66.667 12.93 0.00 0.00 4.61
4116 5182 2.285144 CGACCCACCCCTTACCCT 60.285 66.667 0.00 0.00 0.00 4.34
4124 5190 1.212935 CACCCCTTACCCTCATCCAAG 59.787 57.143 0.00 0.00 0.00 3.61
4131 5197 5.132816 CCCTTACCCTCATCCAAGAGTAATT 59.867 44.000 0.00 0.00 33.75 1.40
4133 5199 7.119387 CCTTACCCTCATCCAAGAGTAATTTT 58.881 38.462 0.00 0.00 33.75 1.82
4142 5208 7.669722 TCATCCAAGAGTAATTTTTAGCCTGTT 59.330 33.333 0.00 0.00 0.00 3.16
4310 5376 7.121382 ACACAATCTGGATGTTCATATTCCTT 58.879 34.615 0.00 0.00 0.00 3.36
4385 5451 1.396653 TCCTTCTCCGATAACCCGTC 58.603 55.000 0.00 0.00 0.00 4.79
4570 5636 3.020274 CTGAATCTCTCGGAAGGACAGA 58.980 50.000 0.00 0.00 31.20 3.41
4698 5764 5.182570 AGTTGTAGTACATGAGTAACAGCGA 59.817 40.000 3.28 0.00 31.46 4.93
4853 5926 1.304713 ATCCAGGCAGGTGCTTTGG 60.305 57.895 15.61 15.61 42.70 3.28
4861 5934 1.825090 CAGGTGCTTTGGTCTGCATA 58.175 50.000 0.00 0.00 41.45 3.14
4870 5943 2.099141 TGGTCTGCATACTGCTGTTC 57.901 50.000 0.09 0.00 45.31 3.18
4872 5945 1.065854 GGTCTGCATACTGCTGTTCCT 60.066 52.381 0.09 0.00 45.31 3.36
4910 5983 0.677098 CAAGCAGCACAGCTCCTCAT 60.677 55.000 0.00 0.00 45.89 2.90
4933 6006 1.620323 GCATGGCCCTGAAAGAAGTTT 59.380 47.619 12.80 0.00 34.07 2.66
4936 6009 2.745968 TGGCCCTGAAAGAAGTTTGTT 58.254 42.857 0.00 0.00 34.07 2.83
4941 6014 4.261994 GCCCTGAAAGAAGTTTGTTGCATA 60.262 41.667 0.00 0.00 34.07 3.14
4982 6058 4.161565 ACAGCCATCGGTTATTGTAGAAGA 59.838 41.667 0.00 0.00 0.00 2.87
5010 6086 6.095021 GGTAAGAAAGGCGACATAAAATTCCT 59.905 38.462 0.00 0.00 0.00 3.36
5022 6098 7.303634 ACATAAAATTCCTGTCGATACACAC 57.696 36.000 0.00 0.00 0.00 3.82
5107 6186 5.010012 TGGAAGAAAACCAAGCATTCTCTTC 59.990 40.000 0.00 0.00 37.60 2.87
5115 6194 3.015327 CAAGCATTCTCTTCCCCTTCAG 58.985 50.000 0.00 0.00 0.00 3.02
5147 6226 4.936891 AGTTTTGCTGATTCAGGTGAAAC 58.063 39.130 15.28 10.25 37.61 2.78
5193 6274 7.605309 TGTATGTAATGGATCTCATCATTCAGC 59.395 37.037 0.00 0.00 34.44 4.26
5201 6282 5.469421 GGATCTCATCATTCAGCGAAAATCT 59.531 40.000 0.00 0.00 0.00 2.40
5209 6290 9.512435 CATCATTCAGCGAAAATCTATCTTTTT 57.488 29.630 0.00 0.00 0.00 1.94
5230 6311 9.639601 CTTTTTACTTTGGAAGACAGTTTCTTT 57.360 29.630 0.00 0.00 45.24 2.52
5240 6322 8.531146 TGGAAGACAGTTTCTTTTGATTTTTCT 58.469 29.630 0.00 0.00 45.24 2.52
5241 6323 9.025020 GGAAGACAGTTTCTTTTGATTTTTCTC 57.975 33.333 0.00 0.00 45.24 2.87
5242 6324 9.794685 GAAGACAGTTTCTTTTGATTTTTCTCT 57.205 29.630 0.00 0.00 45.24 3.10
5243 6325 9.578439 AAGACAGTTTCTTTTGATTTTTCTCTG 57.422 29.630 0.00 0.00 42.37 3.35
5244 6326 8.960591 AGACAGTTTCTTTTGATTTTTCTCTGA 58.039 29.630 0.00 0.00 0.00 3.27
5275 6357 6.388435 GTGGATATACACTACTCCGTTCTT 57.612 41.667 11.08 0.00 38.32 2.52
5276 6358 6.803642 GTGGATATACACTACTCCGTTCTTT 58.196 40.000 11.08 0.00 38.32 2.52
5277 6359 7.263496 GTGGATATACACTACTCCGTTCTTTT 58.737 38.462 11.08 0.00 38.32 2.27
5278 6360 7.763071 GTGGATATACACTACTCCGTTCTTTTT 59.237 37.037 11.08 0.00 38.32 1.94
5298 6380 5.662211 TTTTGTAGGACGTTTTAGACAGC 57.338 39.130 0.00 0.00 0.00 4.40
5299 6381 4.595762 TTGTAGGACGTTTTAGACAGCT 57.404 40.909 0.00 0.00 0.00 4.24
5300 6382 3.909430 TGTAGGACGTTTTAGACAGCTG 58.091 45.455 13.48 13.48 0.00 4.24
5301 6383 3.570975 TGTAGGACGTTTTAGACAGCTGA 59.429 43.478 23.35 0.00 0.00 4.26
5302 6384 3.963428 AGGACGTTTTAGACAGCTGAT 57.037 42.857 23.35 11.17 0.00 2.90
5303 6385 3.589988 AGGACGTTTTAGACAGCTGATG 58.410 45.455 23.35 4.47 0.00 3.07
5305 6387 3.746492 GGACGTTTTAGACAGCTGATGTT 59.254 43.478 23.35 0.00 44.17 2.71
5306 6388 4.377431 GGACGTTTTAGACAGCTGATGTTG 60.377 45.833 23.35 4.64 44.17 3.33
5307 6389 4.377021 ACGTTTTAGACAGCTGATGTTGA 58.623 39.130 23.35 0.00 44.17 3.18
5308 6390 4.814234 ACGTTTTAGACAGCTGATGTTGAA 59.186 37.500 23.35 4.96 44.17 2.69
5309 6391 5.140177 CGTTTTAGACAGCTGATGTTGAAC 58.860 41.667 23.35 15.30 44.17 3.18
5310 6392 5.050091 CGTTTTAGACAGCTGATGTTGAACT 60.050 40.000 23.35 8.36 44.17 3.01
5311 6393 6.145534 CGTTTTAGACAGCTGATGTTGAACTA 59.854 38.462 23.35 7.47 44.17 2.24
5312 6394 7.148573 CGTTTTAGACAGCTGATGTTGAACTAT 60.149 37.037 23.35 0.00 44.17 2.12
5313 6395 8.507249 GTTTTAGACAGCTGATGTTGAACTATT 58.493 33.333 23.35 0.00 44.17 1.73
5314 6396 8.621532 TTTAGACAGCTGATGTTGAACTATTT 57.378 30.769 23.35 0.00 44.17 1.40
5315 6397 8.621532 TTAGACAGCTGATGTTGAACTATTTT 57.378 30.769 23.35 0.00 44.17 1.82
5316 6398 6.906659 AGACAGCTGATGTTGAACTATTTTG 58.093 36.000 23.35 0.00 44.17 2.44
5317 6399 6.017400 ACAGCTGATGTTGAACTATTTTGG 57.983 37.500 23.35 0.00 39.96 3.28
5318 6400 5.047802 ACAGCTGATGTTGAACTATTTTGGG 60.048 40.000 23.35 0.00 39.96 4.12
5319 6401 5.047802 CAGCTGATGTTGAACTATTTTGGGT 60.048 40.000 8.42 0.00 0.00 4.51
5320 6402 5.047802 AGCTGATGTTGAACTATTTTGGGTG 60.048 40.000 0.00 0.00 0.00 4.61
5321 6403 5.132897 TGATGTTGAACTATTTTGGGTGC 57.867 39.130 0.00 0.00 0.00 5.01
5322 6404 4.832266 TGATGTTGAACTATTTTGGGTGCT 59.168 37.500 0.00 0.00 0.00 4.40
5323 6405 4.582701 TGTTGAACTATTTTGGGTGCTG 57.417 40.909 0.00 0.00 0.00 4.41
5324 6406 3.957497 TGTTGAACTATTTTGGGTGCTGT 59.043 39.130 0.00 0.00 0.00 4.40
5325 6407 4.037446 TGTTGAACTATTTTGGGTGCTGTC 59.963 41.667 0.00 0.00 0.00 3.51
5326 6408 4.098914 TGAACTATTTTGGGTGCTGTCT 57.901 40.909 0.00 0.00 0.00 3.41
5327 6409 3.820467 TGAACTATTTTGGGTGCTGTCTG 59.180 43.478 0.00 0.00 0.00 3.51
5328 6410 3.788227 ACTATTTTGGGTGCTGTCTGA 57.212 42.857 0.00 0.00 0.00 3.27
5329 6411 4.098914 ACTATTTTGGGTGCTGTCTGAA 57.901 40.909 0.00 0.00 0.00 3.02
5330 6412 3.821033 ACTATTTTGGGTGCTGTCTGAAC 59.179 43.478 0.00 0.00 0.00 3.18
5331 6413 2.435372 TTTTGGGTGCTGTCTGAACT 57.565 45.000 0.00 0.00 0.00 3.01
5332 6414 1.679139 TTTGGGTGCTGTCTGAACTG 58.321 50.000 0.00 0.00 0.00 3.16
5334 6416 1.968540 GGGTGCTGTCTGAACTGCC 60.969 63.158 5.20 0.00 46.51 4.85
5335 6417 1.072159 GGTGCTGTCTGAACTGCCT 59.928 57.895 5.20 0.00 46.51 4.75
5336 6418 0.321671 GGTGCTGTCTGAACTGCCTA 59.678 55.000 5.20 0.00 46.51 3.93
5337 6419 1.270839 GGTGCTGTCTGAACTGCCTAA 60.271 52.381 5.20 0.00 46.51 2.69
5338 6420 2.494059 GTGCTGTCTGAACTGCCTAAA 58.506 47.619 5.20 0.00 46.51 1.85
5339 6421 2.878406 GTGCTGTCTGAACTGCCTAAAA 59.122 45.455 5.20 0.00 46.51 1.52
5340 6422 2.878406 TGCTGTCTGAACTGCCTAAAAC 59.122 45.455 5.20 0.00 46.51 2.43
5341 6423 2.096218 GCTGTCTGAACTGCCTAAAACG 60.096 50.000 0.00 0.00 42.66 3.60
5342 6424 1.871039 TGTCTGAACTGCCTAAAACGC 59.129 47.619 0.00 0.00 0.00 4.84
5343 6425 1.197036 GTCTGAACTGCCTAAAACGCC 59.803 52.381 0.00 0.00 0.00 5.68
5344 6426 1.071699 TCTGAACTGCCTAAAACGCCT 59.928 47.619 0.00 0.00 0.00 5.52
5345 6427 1.880027 CTGAACTGCCTAAAACGCCTT 59.120 47.619 0.00 0.00 0.00 4.35
5346 6428 3.071479 CTGAACTGCCTAAAACGCCTTA 58.929 45.455 0.00 0.00 0.00 2.69
5347 6429 2.809696 TGAACTGCCTAAAACGCCTTAC 59.190 45.455 0.00 0.00 0.00 2.34
5348 6430 2.554370 ACTGCCTAAAACGCCTTACA 57.446 45.000 0.00 0.00 0.00 2.41
5349 6431 3.067684 ACTGCCTAAAACGCCTTACAT 57.932 42.857 0.00 0.00 0.00 2.29
5350 6432 4.210724 ACTGCCTAAAACGCCTTACATA 57.789 40.909 0.00 0.00 0.00 2.29
5351 6433 4.581868 ACTGCCTAAAACGCCTTACATAA 58.418 39.130 0.00 0.00 0.00 1.90
5352 6434 4.634443 ACTGCCTAAAACGCCTTACATAAG 59.366 41.667 0.00 0.00 0.00 1.73
5353 6435 4.581868 TGCCTAAAACGCCTTACATAAGT 58.418 39.130 0.00 0.00 0.00 2.24
5354 6436 4.393680 TGCCTAAAACGCCTTACATAAGTG 59.606 41.667 0.00 0.00 0.00 3.16
5355 6437 4.632688 GCCTAAAACGCCTTACATAAGTGA 59.367 41.667 0.00 0.00 0.00 3.41
5356 6438 5.122711 GCCTAAAACGCCTTACATAAGTGAA 59.877 40.000 0.00 0.00 0.00 3.18
5357 6439 6.540205 CCTAAAACGCCTTACATAAGTGAAC 58.460 40.000 0.00 0.00 0.00 3.18
5358 6440 6.148150 CCTAAAACGCCTTACATAAGTGAACA 59.852 38.462 0.00 0.00 0.00 3.18
5359 6441 5.607119 AAACGCCTTACATAAGTGAACAG 57.393 39.130 0.00 0.00 0.00 3.16
5360 6442 4.530710 ACGCCTTACATAAGTGAACAGA 57.469 40.909 0.00 0.00 0.00 3.41
5361 6443 4.495422 ACGCCTTACATAAGTGAACAGAG 58.505 43.478 0.00 0.00 0.00 3.35
5362 6444 3.865745 CGCCTTACATAAGTGAACAGAGG 59.134 47.826 0.00 0.00 0.00 3.69
5363 6445 4.192317 GCCTTACATAAGTGAACAGAGGG 58.808 47.826 0.00 0.00 0.00 4.30
5364 6446 4.081087 GCCTTACATAAGTGAACAGAGGGA 60.081 45.833 0.00 0.00 0.00 4.20
5365 6447 5.665459 CCTTACATAAGTGAACAGAGGGAG 58.335 45.833 0.00 0.00 0.00 4.30
5366 6448 5.187967 CCTTACATAAGTGAACAGAGGGAGT 59.812 44.000 0.00 0.00 0.00 3.85
5367 6449 6.380274 CCTTACATAAGTGAACAGAGGGAGTA 59.620 42.308 0.00 0.00 0.00 2.59
5368 6450 5.923733 ACATAAGTGAACAGAGGGAGTAG 57.076 43.478 0.00 0.00 0.00 2.57
5369 6451 4.160626 ACATAAGTGAACAGAGGGAGTAGC 59.839 45.833 0.00 0.00 0.00 3.58
5370 6452 2.310779 AGTGAACAGAGGGAGTAGCA 57.689 50.000 0.00 0.00 0.00 3.49
5371 6453 2.826488 AGTGAACAGAGGGAGTAGCAT 58.174 47.619 0.00 0.00 0.00 3.79
5372 6454 3.177228 AGTGAACAGAGGGAGTAGCATT 58.823 45.455 0.00 0.00 0.00 3.56
5373 6455 4.353777 AGTGAACAGAGGGAGTAGCATTA 58.646 43.478 0.00 0.00 0.00 1.90
5374 6456 4.965532 AGTGAACAGAGGGAGTAGCATTAT 59.034 41.667 0.00 0.00 0.00 1.28
5375 6457 5.426833 AGTGAACAGAGGGAGTAGCATTATT 59.573 40.000 0.00 0.00 0.00 1.40
5376 6458 6.069963 AGTGAACAGAGGGAGTAGCATTATTT 60.070 38.462 0.00 0.00 0.00 1.40
5377 6459 6.037610 GTGAACAGAGGGAGTAGCATTATTTG 59.962 42.308 0.00 0.00 0.00 2.32
5378 6460 5.700402 ACAGAGGGAGTAGCATTATTTGT 57.300 39.130 0.00 0.00 0.00 2.83
5379 6461 5.675538 ACAGAGGGAGTAGCATTATTTGTC 58.324 41.667 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.594775 CGCAACAGCAACTGGGCA 61.595 61.111 12.06 0.00 36.28 5.36
185 188 5.584251 GGAAGAGACAAGAAATGGATGAGAC 59.416 44.000 0.00 0.00 0.00 3.36
205 208 2.373502 AGGGTTCTTTCTCACCTGGAAG 59.626 50.000 0.00 0.00 33.09 3.46
236 239 1.797025 CAACGAAGTGAGGGTTCTCC 58.203 55.000 0.00 0.00 45.00 3.71
250 256 4.191544 CAAAATCCATCTCTAGGCAACGA 58.808 43.478 0.00 0.00 46.39 3.85
313 319 1.550065 ATCAGAATCAGACGAACGCG 58.450 50.000 3.53 3.53 44.79 6.01
320 326 6.734104 AAACTGCAGTTATCAGAATCAGAC 57.266 37.500 31.31 0.00 37.25 3.51
373 379 7.867909 TCGCTAGGATGAGTAATTAATCAACAG 59.132 37.037 18.53 11.50 33.74 3.16
493 506 4.428294 TTCTGCTGGCAGCTATAAGAAT 57.572 40.909 36.50 0.00 42.97 2.40
497 510 5.488262 TGATATTCTGCTGGCAGCTATAA 57.512 39.130 36.50 26.77 42.97 0.98
498 511 5.424573 AGATGATATTCTGCTGGCAGCTATA 59.575 40.000 36.50 28.21 42.97 1.31
501 514 2.372504 AGATGATATTCTGCTGGCAGCT 59.627 45.455 36.50 21.13 42.97 4.24
533 546 9.806203 TTAATTATCCTGCAGTGATCATTTTTG 57.194 29.630 20.24 0.00 0.00 2.44
563 576 9.612066 ATCATAACTTTGTCAACACCAAAAATT 57.388 25.926 0.00 0.00 31.86 1.82
614 627 7.435068 TGATTTTAAGAAAAGAGAACGGGAG 57.565 36.000 0.00 0.00 33.22 4.30
672 685 9.612620 GCTATAGCGAATTAGCAATTAAACAAT 57.387 29.630 9.40 0.00 40.15 2.71
675 694 9.612620 AATGCTATAGCGAATTAGCAATTAAAC 57.387 29.630 19.55 0.00 46.76 2.01
699 718 3.409026 ACTCGAGAGCAGAACCAAAAT 57.591 42.857 21.68 0.00 0.00 1.82
729 748 5.247110 TCAGAGCCAAGAGAATACAGTTTCT 59.753 40.000 0.00 0.00 38.65 2.52
730 749 5.482908 TCAGAGCCAAGAGAATACAGTTTC 58.517 41.667 0.00 0.00 0.00 2.78
748 767 7.413877 GCCTTTTACATCATCAGAAACTCAGAG 60.414 40.741 0.00 0.00 0.00 3.35
754 773 6.259550 AGTGCCTTTTACATCATCAGAAAC 57.740 37.500 0.00 0.00 0.00 2.78
755 774 8.579850 AATAGTGCCTTTTACATCATCAGAAA 57.420 30.769 0.00 0.00 0.00 2.52
921 941 4.885907 CACAGATTCCTGCAGGTAATGATT 59.114 41.667 31.58 7.43 44.16 2.57
999 1019 4.222145 GTGACAGGTTCCCACTTAGACATA 59.778 45.833 0.00 0.00 0.00 2.29
1150 1170 2.353704 CGCCCTGTCTATGAACACTGAA 60.354 50.000 0.00 0.00 0.00 3.02
1153 1173 0.108138 GCGCCCTGTCTATGAACACT 60.108 55.000 0.00 0.00 0.00 3.55
1171 1191 5.506317 GCCATGAACCAAACATACTCATAGC 60.506 44.000 0.00 0.00 0.00 2.97
1215 1235 5.009631 CCAAACATTTCACCAGGACTGATA 58.990 41.667 0.00 0.00 0.00 2.15
1219 1239 1.963515 GCCAAACATTTCACCAGGACT 59.036 47.619 0.00 0.00 0.00 3.85
1221 1241 1.337118 GGCCAAACATTTCACCAGGA 58.663 50.000 0.00 0.00 0.00 3.86
1228 1248 6.348376 CCATACAAACATTGGCCAAACATTTC 60.348 38.462 24.71 0.00 34.12 2.17
1229 1249 5.472820 CCATACAAACATTGGCCAAACATTT 59.527 36.000 24.71 19.06 34.12 2.32
1233 1253 4.001618 ACCATACAAACATTGGCCAAAC 57.998 40.909 24.71 0.00 33.66 2.93
1246 1266 5.450453 TCCAAGAAACTGGAAACCATACAA 58.550 37.500 0.00 0.00 42.69 2.41
1260 1280 2.340337 GGCATGTGCATTCCAAGAAAC 58.660 47.619 7.36 0.00 44.36 2.78
1264 1284 0.974010 AGGGGCATGTGCATTCCAAG 60.974 55.000 7.36 0.00 44.36 3.61
1272 1292 1.748879 TAGCGAAAGGGGCATGTGC 60.749 57.895 0.00 0.00 41.14 4.57
1286 1306 2.546778 ACGAATTGTACCATGGTAGCG 58.453 47.619 25.22 22.12 0.00 4.26
1288 1308 5.092781 GCAAAACGAATTGTACCATGGTAG 58.907 41.667 25.22 14.23 32.80 3.18
1290 1310 3.572255 AGCAAAACGAATTGTACCATGGT 59.428 39.130 23.55 23.55 32.80 3.55
1293 1313 8.707839 CAATTTAAGCAAAACGAATTGTACCAT 58.292 29.630 0.00 0.00 34.60 3.55
1305 1325 4.092821 GGATTCGGCCAATTTAAGCAAAAC 59.907 41.667 2.24 0.00 0.00 2.43
1373 1393 0.321298 TAGAGCGTTGGTTTGAGCCC 60.321 55.000 0.00 0.00 0.00 5.19
1376 1396 4.245660 TGAAGATAGAGCGTTGGTTTGAG 58.754 43.478 0.00 0.00 0.00 3.02
1387 1407 3.801594 GCAGCTAACACTGAAGATAGAGC 59.198 47.826 0.00 0.00 40.25 4.09
1388 1408 5.261209 AGCAGCTAACACTGAAGATAGAG 57.739 43.478 0.00 0.00 40.25 2.43
1389 1409 5.667539 AAGCAGCTAACACTGAAGATAGA 57.332 39.130 0.00 0.00 40.25 1.98
1397 1419 3.664107 TCCAAGTAAGCAGCTAACACTG 58.336 45.455 0.00 0.00 40.80 3.66
1439 1461 3.893813 ACCCCTATTACGGATATATCGCC 59.106 47.826 6.64 0.00 0.00 5.54
1441 1463 4.340097 TGCACCCCTATTACGGATATATCG 59.660 45.833 6.64 5.08 0.00 2.92
1496 1518 4.269363 CGTCTATCACACCGTTATTTTCCC 59.731 45.833 0.00 0.00 0.00 3.97
1498 1520 5.346822 ACACGTCTATCACACCGTTATTTTC 59.653 40.000 0.00 0.00 0.00 2.29
1503 1526 3.366273 GGAACACGTCTATCACACCGTTA 60.366 47.826 0.00 0.00 0.00 3.18
1509 1532 7.747888 CAATTATTTGGAACACGTCTATCACA 58.252 34.615 0.00 0.00 39.29 3.58
1544 1567 3.429547 GCGAGAACTGTGTATCACTCCAT 60.430 47.826 0.00 0.00 35.11 3.41
1553 1578 3.008330 GAGTCTAGGCGAGAACTGTGTA 58.992 50.000 0.00 0.00 35.37 2.90
1555 1580 2.088423 AGAGTCTAGGCGAGAACTGTG 58.912 52.381 0.00 0.00 35.37 3.66
1582 1607 6.939730 TGGTATGCACTCTAGACAATGAAAAA 59.060 34.615 0.00 0.00 0.00 1.94
1584 1609 6.048732 TGGTATGCACTCTAGACAATGAAA 57.951 37.500 0.00 0.00 0.00 2.69
1621 1646 3.950395 CCAAATCATTGAGAAGGAGGACC 59.050 47.826 0.00 0.00 38.94 4.46
1706 1731 5.591099 TGATTGCTGACAACCTTTTCTTTC 58.409 37.500 0.00 0.00 38.99 2.62
1733 1758 4.080695 AGCATGGACTCAATCTGTGTACAT 60.081 41.667 0.00 1.59 43.81 2.29
1789 1814 0.976641 ACGCAGGTGATCCAAAGAGA 59.023 50.000 0.00 0.00 35.89 3.10
1795 1820 1.296392 CTCCAACGCAGGTGATCCA 59.704 57.895 0.00 0.00 35.89 3.41
1796 1821 2.109126 GCTCCAACGCAGGTGATCC 61.109 63.158 0.00 0.00 0.00 3.36
1872 1898 7.795047 ACAAGTGAGGAATACATCATACATGA 58.205 34.615 0.00 0.00 39.00 3.07
1915 1941 9.803315 TGTCAGACAGATACAGTATAATGAAAC 57.197 33.333 7.27 0.00 0.00 2.78
1919 1945 9.755804 ATGTTGTCAGACAGATACAGTATAATG 57.244 33.333 11.35 0.00 32.19 1.90
1920 1946 9.973450 GATGTTGTCAGACAGATACAGTATAAT 57.027 33.333 11.35 0.00 32.19 1.28
1940 1966 7.621428 ATGAAAGGTATCAAGTCTGATGTTG 57.379 36.000 0.00 0.00 42.48 3.33
1941 1967 8.321353 TGTATGAAAGGTATCAAGTCTGATGTT 58.679 33.333 0.00 0.00 42.48 2.71
1942 1968 7.851228 TGTATGAAAGGTATCAAGTCTGATGT 58.149 34.615 0.00 0.00 42.48 3.06
1976 2002 3.631250 AGTTGAAACCCAAGACACACAT 58.369 40.909 0.00 0.00 35.03 3.21
1978 2004 4.157840 AGAAAGTTGAAACCCAAGACACAC 59.842 41.667 0.00 0.00 35.03 3.82
1993 2019 7.275341 TCAAACTTACAACAATGCAGAAAGTTG 59.725 33.333 16.76 16.76 45.02 3.16
1994 2020 7.319646 TCAAACTTACAACAATGCAGAAAGTT 58.680 30.769 0.00 0.00 0.00 2.66
2037 2064 5.435291 GACTTGTTCTCATCAGATTCCCAT 58.565 41.667 0.00 0.00 0.00 4.00
2048 2075 5.047306 TCAGTGGAATACGACTTGTTCTCAT 60.047 40.000 0.00 0.00 33.01 2.90
2049 2076 4.279922 TCAGTGGAATACGACTTGTTCTCA 59.720 41.667 0.00 0.00 33.01 3.27
2059 2086 3.850122 CAGTGACTCAGTGGAATACGA 57.150 47.619 6.01 0.00 31.77 3.43
2075 2102 1.102154 TCAAACCACAACTGCCAGTG 58.898 50.000 0.00 0.00 35.56 3.66
2102 2129 6.019801 GCATTTCATTCTGCAGCTTAAATCAG 60.020 38.462 9.47 3.46 38.28 2.90
2107 2134 5.395682 AAGCATTTCATTCTGCAGCTTAA 57.604 34.783 9.47 0.00 40.88 1.85
2110 2137 3.380637 CCTAAGCATTTCATTCTGCAGCT 59.619 43.478 9.47 0.00 40.88 4.24
2155 2182 9.930158 TTTGTGCTAGTATCCCCTATTTATTTT 57.070 29.630 0.00 0.00 0.00 1.82
2157 2184 9.520515 CATTTGTGCTAGTATCCCCTATTTATT 57.479 33.333 0.00 0.00 0.00 1.40
2158 2185 7.611855 GCATTTGTGCTAGTATCCCCTATTTAT 59.388 37.037 0.00 0.00 0.00 1.40
2159 2186 6.940298 GCATTTGTGCTAGTATCCCCTATTTA 59.060 38.462 0.00 0.00 0.00 1.40
2160 2187 5.770162 GCATTTGTGCTAGTATCCCCTATTT 59.230 40.000 0.00 0.00 0.00 1.40
2169 2196 2.288666 CACGGGCATTTGTGCTAGTAT 58.711 47.619 0.07 0.00 34.73 2.12
2339 2369 0.033109 GGATTGGGCTAAGGGCACTT 60.033 55.000 6.40 6.40 46.25 3.16
3027 3428 0.899720 TAAGGCAACGATCCGGAAGT 59.100 50.000 9.01 9.50 46.39 3.01
3039 3440 0.810648 CGAGGCAAGCAATAAGGCAA 59.189 50.000 0.00 0.00 35.83 4.52
3040 3441 0.322456 ACGAGGCAAGCAATAAGGCA 60.322 50.000 0.00 0.00 35.83 4.75
3041 3442 0.811281 AACGAGGCAAGCAATAAGGC 59.189 50.000 0.00 0.00 0.00 4.35
3042 3443 1.133025 CCAACGAGGCAAGCAATAAGG 59.867 52.381 0.00 0.00 0.00 2.69
3043 3444 1.812571 ACCAACGAGGCAAGCAATAAG 59.187 47.619 0.00 0.00 43.14 1.73
3044 3445 1.904287 ACCAACGAGGCAAGCAATAA 58.096 45.000 0.00 0.00 43.14 1.40
3045 3446 1.539388 CAACCAACGAGGCAAGCAATA 59.461 47.619 0.00 0.00 43.14 1.90
3046 3447 0.314935 CAACCAACGAGGCAAGCAAT 59.685 50.000 0.00 0.00 43.14 3.56
3047 3448 0.749818 TCAACCAACGAGGCAAGCAA 60.750 50.000 0.00 0.00 43.14 3.91
3048 3449 1.153066 TCAACCAACGAGGCAAGCA 60.153 52.632 0.00 0.00 43.14 3.91
3049 3450 1.166531 ACTCAACCAACGAGGCAAGC 61.167 55.000 0.00 0.00 43.14 4.01
3050 3451 0.868406 GACTCAACCAACGAGGCAAG 59.132 55.000 0.00 0.00 43.14 4.01
3095 3508 3.371965 TCGTTATCCTGCCTCCTTACTT 58.628 45.455 0.00 0.00 0.00 2.24
3114 3527 0.940519 TTGGGTTTCGTGTACGCTCG 60.941 55.000 4.67 1.89 39.60 5.03
3117 3530 2.471862 TTTTTGGGTTTCGTGTACGC 57.528 45.000 0.00 0.00 39.60 4.42
3224 3677 8.005388 AGTTATATGTACCAGTACCACAGATCT 58.995 37.037 5.53 0.00 35.26 2.75
3225 3678 8.179509 AGTTATATGTACCAGTACCACAGATC 57.820 38.462 5.53 0.00 35.26 2.75
3226 3679 8.548880 AAGTTATATGTACCAGTACCACAGAT 57.451 34.615 5.53 0.00 35.26 2.90
3227 3680 7.966339 AAGTTATATGTACCAGTACCACAGA 57.034 36.000 5.53 0.00 35.26 3.41
3230 3683 9.038803 GCTAAAAGTTATATGTACCAGTACCAC 57.961 37.037 5.53 0.00 35.26 4.16
3231 3684 8.984855 AGCTAAAAGTTATATGTACCAGTACCA 58.015 33.333 5.53 0.00 35.26 3.25
3249 3702 9.974750 GCTTCACAAACTAGTTATAGCTAAAAG 57.025 33.333 8.92 6.39 31.66 2.27
3250 3703 9.496873 TGCTTCACAAACTAGTTATAGCTAAAA 57.503 29.630 8.92 0.00 31.66 1.52
3251 3704 9.667107 ATGCTTCACAAACTAGTTATAGCTAAA 57.333 29.630 8.92 0.00 31.66 1.85
3252 3705 9.667107 AATGCTTCACAAACTAGTTATAGCTAA 57.333 29.630 8.92 0.00 31.66 3.09
3253 3706 9.667107 AAATGCTTCACAAACTAGTTATAGCTA 57.333 29.630 8.92 0.00 31.66 3.32
3254 3707 8.567285 AAATGCTTCACAAACTAGTTATAGCT 57.433 30.769 8.92 0.00 31.66 3.32
3255 3708 7.910683 GGAAATGCTTCACAAACTAGTTATAGC 59.089 37.037 8.92 12.95 32.75 2.97
3256 3709 8.116753 CGGAAATGCTTCACAAACTAGTTATAG 58.883 37.037 8.92 4.90 32.75 1.31
3257 3710 7.604927 ACGGAAATGCTTCACAAACTAGTTATA 59.395 33.333 8.92 0.00 32.75 0.98
3258 3711 6.430000 ACGGAAATGCTTCACAAACTAGTTAT 59.570 34.615 8.92 0.00 32.75 1.89
3259 3712 5.761234 ACGGAAATGCTTCACAAACTAGTTA 59.239 36.000 8.92 0.00 32.75 2.24
3260 3713 4.578928 ACGGAAATGCTTCACAAACTAGTT 59.421 37.500 1.12 1.12 32.75 2.24
3261 3714 4.134563 ACGGAAATGCTTCACAAACTAGT 58.865 39.130 0.00 0.00 32.75 2.57
3262 3715 4.749245 ACGGAAATGCTTCACAAACTAG 57.251 40.909 0.00 0.00 32.75 2.57
3263 3716 4.023536 GGAACGGAAATGCTTCACAAACTA 60.024 41.667 0.00 0.00 32.75 2.24
3264 3717 3.243401 GGAACGGAAATGCTTCACAAACT 60.243 43.478 0.00 0.00 32.75 2.66
3265 3718 3.049912 GGAACGGAAATGCTTCACAAAC 58.950 45.455 0.00 0.00 32.75 2.93
3266 3719 2.955660 AGGAACGGAAATGCTTCACAAA 59.044 40.909 0.00 0.00 32.75 2.83
3267 3720 2.582052 AGGAACGGAAATGCTTCACAA 58.418 42.857 0.00 0.00 32.75 3.33
3268 3721 2.270352 AGGAACGGAAATGCTTCACA 57.730 45.000 0.00 0.00 32.75 3.58
3269 3722 4.215613 ACTTTAGGAACGGAAATGCTTCAC 59.784 41.667 0.00 0.00 32.75 3.18
3270 3723 4.394729 ACTTTAGGAACGGAAATGCTTCA 58.605 39.130 0.00 0.00 32.75 3.02
3271 3724 6.679327 ATACTTTAGGAACGGAAATGCTTC 57.321 37.500 0.00 0.00 0.00 3.86
3272 3725 7.462571 AAATACTTTAGGAACGGAAATGCTT 57.537 32.000 0.00 0.00 0.00 3.91
3273 3726 7.362660 GGAAAATACTTTAGGAACGGAAATGCT 60.363 37.037 0.00 0.00 0.00 3.79
3274 3727 6.750501 GGAAAATACTTTAGGAACGGAAATGC 59.249 38.462 0.00 0.00 0.00 3.56
3275 3728 7.822658 TGGAAAATACTTTAGGAACGGAAATG 58.177 34.615 0.00 0.00 0.00 2.32
3276 3729 8.411991 TTGGAAAATACTTTAGGAACGGAAAT 57.588 30.769 0.00 0.00 0.00 2.17
3277 3730 7.820578 TTGGAAAATACTTTAGGAACGGAAA 57.179 32.000 0.00 0.00 0.00 3.13
3278 3731 8.411991 AATTGGAAAATACTTTAGGAACGGAA 57.588 30.769 0.00 0.00 0.00 4.30
3279 3732 7.148373 CGAATTGGAAAATACTTTAGGAACGGA 60.148 37.037 0.00 0.00 0.00 4.69
3280 3733 6.964934 CGAATTGGAAAATACTTTAGGAACGG 59.035 38.462 0.00 0.00 0.00 4.44
3281 3734 6.468000 GCGAATTGGAAAATACTTTAGGAACG 59.532 38.462 0.00 0.00 0.00 3.95
3282 3735 7.272731 GTGCGAATTGGAAAATACTTTAGGAAC 59.727 37.037 0.00 0.00 0.00 3.62
3283 3736 7.175990 AGTGCGAATTGGAAAATACTTTAGGAA 59.824 33.333 0.00 0.00 0.00 3.36
3284 3737 6.657541 AGTGCGAATTGGAAAATACTTTAGGA 59.342 34.615 0.00 0.00 0.00 2.94
3285 3738 6.852664 AGTGCGAATTGGAAAATACTTTAGG 58.147 36.000 0.00 0.00 0.00 2.69
3286 3739 8.665685 AGTAGTGCGAATTGGAAAATACTTTAG 58.334 33.333 0.00 0.00 0.00 1.85
3287 3740 8.556213 AGTAGTGCGAATTGGAAAATACTTTA 57.444 30.769 0.00 0.00 0.00 1.85
3288 3741 7.361799 GGAGTAGTGCGAATTGGAAAATACTTT 60.362 37.037 5.60 0.00 0.00 2.66
3289 3742 6.093633 GGAGTAGTGCGAATTGGAAAATACTT 59.906 38.462 5.60 0.00 0.00 2.24
3290 3743 5.585047 GGAGTAGTGCGAATTGGAAAATACT 59.415 40.000 4.28 4.28 0.00 2.12
3291 3744 5.220796 GGGAGTAGTGCGAATTGGAAAATAC 60.221 44.000 0.00 0.00 0.00 1.89
3292 3745 4.879545 GGGAGTAGTGCGAATTGGAAAATA 59.120 41.667 0.00 0.00 0.00 1.40
3293 3746 3.694566 GGGAGTAGTGCGAATTGGAAAAT 59.305 43.478 0.00 0.00 0.00 1.82
3294 3747 3.078837 GGGAGTAGTGCGAATTGGAAAA 58.921 45.455 0.00 0.00 0.00 2.29
3295 3748 2.304761 AGGGAGTAGTGCGAATTGGAAA 59.695 45.455 0.00 0.00 0.00 3.13
3296 3749 1.906574 AGGGAGTAGTGCGAATTGGAA 59.093 47.619 0.00 0.00 0.00 3.53
3297 3750 1.480954 GAGGGAGTAGTGCGAATTGGA 59.519 52.381 0.00 0.00 0.00 3.53
3298 3751 1.207089 TGAGGGAGTAGTGCGAATTGG 59.793 52.381 0.00 0.00 0.00 3.16
3299 3752 2.672961 TGAGGGAGTAGTGCGAATTG 57.327 50.000 0.00 0.00 0.00 2.32
3300 3753 2.501723 ACATGAGGGAGTAGTGCGAATT 59.498 45.455 0.00 0.00 0.00 2.17
3301 3754 2.111384 ACATGAGGGAGTAGTGCGAAT 58.889 47.619 0.00 0.00 0.00 3.34
3302 3755 1.557099 ACATGAGGGAGTAGTGCGAA 58.443 50.000 0.00 0.00 0.00 4.70
3303 3756 1.557099 AACATGAGGGAGTAGTGCGA 58.443 50.000 0.00 0.00 0.00 5.10
3304 3757 2.002586 CAAACATGAGGGAGTAGTGCG 58.997 52.381 0.00 0.00 0.00 5.34
3305 3758 2.744202 CACAAACATGAGGGAGTAGTGC 59.256 50.000 0.00 0.00 0.00 4.40
3306 3759 4.271696 TCACAAACATGAGGGAGTAGTG 57.728 45.455 0.00 0.00 0.00 2.74
3307 3760 4.505039 GGTTCACAAACATGAGGGAGTAGT 60.505 45.833 0.00 0.00 37.10 2.73
3308 3761 4.003648 GGTTCACAAACATGAGGGAGTAG 58.996 47.826 0.00 0.00 37.10 2.57
3309 3762 3.392947 TGGTTCACAAACATGAGGGAGTA 59.607 43.478 0.00 0.00 37.10 2.59
3310 3763 2.174639 TGGTTCACAAACATGAGGGAGT 59.825 45.455 0.00 0.00 37.10 3.85
3311 3764 2.862541 TGGTTCACAAACATGAGGGAG 58.137 47.619 0.00 0.00 37.10 4.30
3312 3765 3.524095 ATGGTTCACAAACATGAGGGA 57.476 42.857 0.00 0.00 37.10 4.20
3313 3766 5.920193 ATTATGGTTCACAAACATGAGGG 57.080 39.130 0.00 0.00 37.10 4.30
3314 3767 7.970061 CACTTATTATGGTTCACAAACATGAGG 59.030 37.037 0.00 0.00 37.10 3.86
3315 3768 8.514594 ACACTTATTATGGTTCACAAACATGAG 58.485 33.333 0.00 0.00 37.10 2.90
3316 3769 8.296000 CACACTTATTATGGTTCACAAACATGA 58.704 33.333 0.00 0.00 37.10 3.07
3317 3770 8.296000 TCACACTTATTATGGTTCACAAACATG 58.704 33.333 0.00 0.00 37.10 3.21
3318 3771 8.296713 GTCACACTTATTATGGTTCACAAACAT 58.703 33.333 0.00 0.00 37.10 2.71
3319 3772 7.500892 AGTCACACTTATTATGGTTCACAAACA 59.499 33.333 0.00 0.00 37.10 2.83
3320 3773 7.871853 AGTCACACTTATTATGGTTCACAAAC 58.128 34.615 0.00 0.00 34.46 2.93
3321 3774 9.214957 CTAGTCACACTTATTATGGTTCACAAA 57.785 33.333 0.00 0.00 0.00 2.83
3322 3775 7.333423 GCTAGTCACACTTATTATGGTTCACAA 59.667 37.037 0.00 0.00 0.00 3.33
3323 3776 6.816640 GCTAGTCACACTTATTATGGTTCACA 59.183 38.462 0.00 0.00 0.00 3.58
3324 3777 6.258068 GGCTAGTCACACTTATTATGGTTCAC 59.742 42.308 0.00 0.00 0.00 3.18
3325 3778 6.070481 TGGCTAGTCACACTTATTATGGTTCA 60.070 38.462 0.00 0.00 0.00 3.18
3326 3779 6.346096 TGGCTAGTCACACTTATTATGGTTC 58.654 40.000 0.00 0.00 0.00 3.62
3327 3780 6.308015 TGGCTAGTCACACTTATTATGGTT 57.692 37.500 0.00 0.00 0.00 3.67
3328 3781 5.950544 TGGCTAGTCACACTTATTATGGT 57.049 39.130 0.00 0.00 0.00 3.55
3329 3782 7.624360 TTTTGGCTAGTCACACTTATTATGG 57.376 36.000 0.00 0.00 0.00 2.74
3453 3912 5.695851 AGTTTCTTCGAAGCAATCATGTT 57.304 34.783 20.56 0.00 0.00 2.71
3457 3924 4.024048 GTCCAAGTTTCTTCGAAGCAATCA 60.024 41.667 20.56 0.00 0.00 2.57
3466 3933 2.778299 TCCCATGTCCAAGTTTCTTCG 58.222 47.619 0.00 0.00 0.00 3.79
3468 3935 2.884639 CGTTCCCATGTCCAAGTTTCTT 59.115 45.455 0.00 0.00 0.00 2.52
3480 3947 3.275617 TTATCTGAACCCGTTCCCATG 57.724 47.619 5.17 0.00 38.77 3.66
3481 3948 3.371595 CCTTTATCTGAACCCGTTCCCAT 60.372 47.826 5.17 0.47 38.77 4.00
3488 3955 6.037172 CACTAACATTCCTTTATCTGAACCCG 59.963 42.308 0.00 0.00 0.00 5.28
3507 3974 6.538742 TGGCATAGACATTTAGCTTCACTAAC 59.461 38.462 0.00 0.00 40.63 2.34
3530 3997 4.869215 TGTTCATGCACAGTTAAACATGG 58.131 39.130 0.00 0.00 40.22 3.66
3532 3999 7.436118 AGAATTGTTCATGCACAGTTAAACAT 58.564 30.769 6.24 0.00 27.48 2.71
3536 4003 8.165239 ACTAAGAATTGTTCATGCACAGTTAA 57.835 30.769 6.24 0.00 27.48 2.01
3542 4012 7.028962 TGCATTACTAAGAATTGTTCATGCAC 58.971 34.615 14.95 0.00 37.05 4.57
3553 4023 9.797642 TGATGGATAACATGCATTACTAAGAAT 57.202 29.630 0.00 0.00 41.66 2.40
3556 4026 7.663081 ACCTGATGGATAACATGCATTACTAAG 59.337 37.037 0.00 0.00 41.66 2.18
3557 4027 7.517320 ACCTGATGGATAACATGCATTACTAA 58.483 34.615 0.00 0.00 41.66 2.24
3564 4034 2.837498 CGACCTGATGGATAACATGCA 58.163 47.619 0.00 0.00 40.72 3.96
3568 4038 3.704566 ACTAAGCGACCTGATGGATAACA 59.295 43.478 0.00 0.00 37.04 2.41
3569 4039 4.051922 CACTAAGCGACCTGATGGATAAC 58.948 47.826 0.00 0.00 37.04 1.89
3570 4040 3.704566 ACACTAAGCGACCTGATGGATAA 59.295 43.478 0.00 0.00 37.04 1.75
3624 4094 5.379732 TTTTCTTTCACGGTGAAGTGTTT 57.620 34.783 21.47 0.00 42.40 2.83
3647 4117 7.059156 AGTGCAAGAAAATATGATAGAGGCTT 58.941 34.615 0.00 0.00 0.00 4.35
3648 4118 6.599445 AGTGCAAGAAAATATGATAGAGGCT 58.401 36.000 0.00 0.00 0.00 4.58
3659 4129 7.039784 AGCCAAATACAAGAGTGCAAGAAAATA 60.040 33.333 0.00 0.00 0.00 1.40
3688 4695 2.433436 ACCAATTGACTCCGGCTTAAC 58.567 47.619 7.12 0.00 0.00 2.01
3689 4696 2.871096 ACCAATTGACTCCGGCTTAA 57.129 45.000 7.12 0.00 0.00 1.85
3727 4735 5.186797 ACACACCCAAAGAAACATCAAGAAA 59.813 36.000 0.00 0.00 0.00 2.52
3747 4755 9.460019 TTTATTTCAGATGTCATATTCCACACA 57.540 29.630 0.00 0.00 0.00 3.72
3759 4767 6.237755 CCCTAACGTCGTTTATTTCAGATGTC 60.238 42.308 16.98 0.00 32.34 3.06
3774 4782 0.319405 ACTTTGACCCCCTAACGTCG 59.681 55.000 0.00 0.00 0.00 5.12
3778 4786 1.613520 GGCTCACTTTGACCCCCTAAC 60.614 57.143 0.00 0.00 0.00 2.34
3779 4787 0.696501 GGCTCACTTTGACCCCCTAA 59.303 55.000 0.00 0.00 0.00 2.69
3814 4823 1.098050 GGGTCATGCATCAACTCACC 58.902 55.000 0.00 0.00 0.00 4.02
3828 4837 0.251916 GAATCGATGTGGTGGGGTCA 59.748 55.000 0.00 0.00 0.00 4.02
3831 4840 1.340017 ACTTGAATCGATGTGGTGGGG 60.340 52.381 0.00 0.00 0.00 4.96
3894 4905 4.476479 AGGAAAGATGTTAGAGAAGCCCAT 59.524 41.667 0.00 0.00 0.00 4.00
3895 4906 3.846588 AGGAAAGATGTTAGAGAAGCCCA 59.153 43.478 0.00 0.00 0.00 5.36
3945 5011 8.422577 AGGCCTGACTTAAATAAATTGAAGTT 57.577 30.769 3.11 0.00 32.37 2.66
3955 5021 7.455058 TGTAAGTTGAAGGCCTGACTTAAATA 58.545 34.615 25.98 17.47 36.63 1.40
3957 5023 5.686753 TGTAAGTTGAAGGCCTGACTTAAA 58.313 37.500 25.98 21.58 36.63 1.52
3972 5038 6.849502 AGAAGACATGATGCAATGTAAGTTG 58.150 36.000 4.01 0.00 40.87 3.16
4005 5071 5.106038 TGACAGGTATAACAAGTAGTCACGG 60.106 44.000 0.00 0.00 30.64 4.94
4029 5095 0.607489 GGGTGAGCACATTGAGCAGT 60.607 55.000 8.78 0.00 0.00 4.40
4088 5154 2.358125 TGGGTCGCGATTGTGGTG 60.358 61.111 14.06 0.00 0.00 4.17
4108 5174 5.896073 ATTACTCTTGGATGAGGGTAAGG 57.104 43.478 4.01 0.00 43.69 2.69
4116 5182 7.175104 ACAGGCTAAAAATTACTCTTGGATGA 58.825 34.615 0.00 0.00 0.00 2.92
4124 5190 6.977213 TGAACCAACAGGCTAAAAATTACTC 58.023 36.000 0.00 0.00 0.00 2.59
4131 5197 7.531857 TTTATCATGAACCAACAGGCTAAAA 57.468 32.000 0.00 0.00 0.00 1.52
4133 5199 6.321181 GGATTTATCATGAACCAACAGGCTAA 59.679 38.462 0.00 0.00 0.00 3.09
4142 5208 7.770433 CAGACTAGTTGGATTTATCATGAACCA 59.230 37.037 0.00 2.30 0.00 3.67
4310 5376 1.487976 CTCAGGAGCAGAAAGGGCATA 59.512 52.381 0.00 0.00 0.00 3.14
4385 5451 0.574454 GTGCTGATCTTTAGCTCGCG 59.426 55.000 0.00 0.00 41.66 5.87
4570 5636 6.084326 ACAAGCCAAAACAATCGATTTAGT 57.916 33.333 8.21 1.17 0.00 2.24
4723 5789 3.684305 CAGGAAATCAGTCGCATGTGTAA 59.316 43.478 6.09 0.00 0.00 2.41
4861 5934 0.107017 AACACAGCAGGAACAGCAGT 60.107 50.000 0.00 0.00 45.86 4.40
4872 5945 2.515757 TGCGCCTGAAACACAGCA 60.516 55.556 4.18 0.00 44.52 4.41
4933 6006 4.672542 GCAGCGAGAAAGAAATATGCAACA 60.673 41.667 0.00 0.00 32.79 3.33
4936 6009 2.030823 CGCAGCGAGAAAGAAATATGCA 59.969 45.455 9.98 0.00 32.79 3.96
4941 6014 2.143122 TGTTCGCAGCGAGAAAGAAAT 58.857 42.857 18.62 0.00 37.14 2.17
4982 6058 6.827586 TTTTATGTCGCCTTTCTTACCAAT 57.172 33.333 0.00 0.00 0.00 3.16
5010 6086 0.459411 CGCCATGGTGTGTATCGACA 60.459 55.000 17.59 0.00 0.00 4.35
5018 6094 1.153978 GCATCAACGCCATGGTGTG 60.154 57.895 30.88 22.77 38.98 3.82
5019 6095 3.277133 GCATCAACGCCATGGTGT 58.723 55.556 25.40 25.40 40.97 4.16
5107 6186 2.393271 CTGCAGAACTACTGAAGGGG 57.607 55.000 8.42 0.00 45.93 4.79
5115 6194 4.756084 ATCAGCAAAACTGCAGAACTAC 57.244 40.909 23.35 6.71 46.76 2.73
5147 6226 4.759782 ACATCTGATCAACGGAAACTAGG 58.240 43.478 0.00 0.00 37.44 3.02
5157 6236 9.149225 GAGATCCATTACATACATCTGATCAAC 57.851 37.037 0.00 0.00 31.94 3.18
5209 6290 7.931578 TCAAAAGAAACTGTCTTCCAAAGTA 57.068 32.000 0.00 0.00 46.36 2.24
5210 6291 6.834168 TCAAAAGAAACTGTCTTCCAAAGT 57.166 33.333 0.00 0.00 46.36 2.66
5230 6311 7.720957 TCCACTCTTTCATCAGAGAAAAATCAA 59.279 33.333 4.72 0.00 42.81 2.57
5240 6322 7.904558 AGTGTATATCCACTCTTTCATCAGA 57.095 36.000 0.00 0.00 41.84 3.27
5241 6323 8.855110 AGTAGTGTATATCCACTCTTTCATCAG 58.145 37.037 3.94 0.00 44.36 2.90
5242 6324 8.768501 AGTAGTGTATATCCACTCTTTCATCA 57.231 34.615 3.94 0.00 44.36 3.07
5243 6325 8.301002 GGAGTAGTGTATATCCACTCTTTCATC 58.699 40.741 3.94 0.00 44.36 2.92
5244 6326 7.040340 CGGAGTAGTGTATATCCACTCTTTCAT 60.040 40.741 3.94 0.00 44.36 2.57
5250 6332 5.764192 AGAACGGAGTAGTGTATATCCACTC 59.236 44.000 3.94 0.00 45.00 3.51
5275 6357 5.818857 AGCTGTCTAAAACGTCCTACAAAAA 59.181 36.000 0.00 0.00 0.00 1.94
5276 6358 5.235616 CAGCTGTCTAAAACGTCCTACAAAA 59.764 40.000 5.25 0.00 0.00 2.44
5277 6359 4.748102 CAGCTGTCTAAAACGTCCTACAAA 59.252 41.667 5.25 0.00 0.00 2.83
5278 6360 4.038282 TCAGCTGTCTAAAACGTCCTACAA 59.962 41.667 14.67 0.00 0.00 2.41
5279 6361 3.570975 TCAGCTGTCTAAAACGTCCTACA 59.429 43.478 14.67 0.00 0.00 2.74
5280 6362 4.170292 TCAGCTGTCTAAAACGTCCTAC 57.830 45.455 14.67 0.00 0.00 3.18
5281 6363 4.219944 ACATCAGCTGTCTAAAACGTCCTA 59.780 41.667 14.67 0.00 29.94 2.94
5282 6364 3.006967 ACATCAGCTGTCTAAAACGTCCT 59.993 43.478 14.67 0.00 29.94 3.85
5283 6365 3.326747 ACATCAGCTGTCTAAAACGTCC 58.673 45.455 14.67 0.00 29.94 4.79
5284 6366 4.447724 TCAACATCAGCTGTCTAAAACGTC 59.552 41.667 14.67 0.00 36.98 4.34
5285 6367 4.377021 TCAACATCAGCTGTCTAAAACGT 58.623 39.130 14.67 0.00 36.98 3.99
5286 6368 4.990543 TCAACATCAGCTGTCTAAAACG 57.009 40.909 14.67 0.00 36.98 3.60
5287 6369 6.305693 AGTTCAACATCAGCTGTCTAAAAC 57.694 37.500 14.67 11.99 36.98 2.43
5288 6370 8.621532 AATAGTTCAACATCAGCTGTCTAAAA 57.378 30.769 14.67 0.05 36.98 1.52
5289 6371 8.621532 AAATAGTTCAACATCAGCTGTCTAAA 57.378 30.769 14.67 0.00 36.98 1.85
5290 6372 8.506437 CAAAATAGTTCAACATCAGCTGTCTAA 58.494 33.333 14.67 0.00 36.98 2.10
5291 6373 7.119699 CCAAAATAGTTCAACATCAGCTGTCTA 59.880 37.037 14.67 0.00 36.98 2.59
5292 6374 6.072286 CCAAAATAGTTCAACATCAGCTGTCT 60.072 38.462 14.67 0.00 36.98 3.41
5293 6375 6.088824 CCAAAATAGTTCAACATCAGCTGTC 58.911 40.000 14.67 0.00 36.98 3.51
5294 6376 5.047802 CCCAAAATAGTTCAACATCAGCTGT 60.048 40.000 14.67 0.00 40.84 4.40
5295 6377 5.047802 ACCCAAAATAGTTCAACATCAGCTG 60.048 40.000 7.63 7.63 0.00 4.24
5296 6378 5.047802 CACCCAAAATAGTTCAACATCAGCT 60.048 40.000 0.00 0.00 0.00 4.24
5297 6379 5.163513 CACCCAAAATAGTTCAACATCAGC 58.836 41.667 0.00 0.00 0.00 4.26
5298 6380 5.047802 AGCACCCAAAATAGTTCAACATCAG 60.048 40.000 0.00 0.00 0.00 2.90
5299 6381 4.832266 AGCACCCAAAATAGTTCAACATCA 59.168 37.500 0.00 0.00 0.00 3.07
5300 6382 5.163513 CAGCACCCAAAATAGTTCAACATC 58.836 41.667 0.00 0.00 0.00 3.06
5301 6383 4.588528 ACAGCACCCAAAATAGTTCAACAT 59.411 37.500 0.00 0.00 0.00 2.71
5302 6384 3.957497 ACAGCACCCAAAATAGTTCAACA 59.043 39.130 0.00 0.00 0.00 3.33
5303 6385 4.278419 AGACAGCACCCAAAATAGTTCAAC 59.722 41.667 0.00 0.00 0.00 3.18
5304 6386 4.278170 CAGACAGCACCCAAAATAGTTCAA 59.722 41.667 0.00 0.00 0.00 2.69
5305 6387 3.820467 CAGACAGCACCCAAAATAGTTCA 59.180 43.478 0.00 0.00 0.00 3.18
5306 6388 4.072131 TCAGACAGCACCCAAAATAGTTC 58.928 43.478 0.00 0.00 0.00 3.01
5307 6389 4.098914 TCAGACAGCACCCAAAATAGTT 57.901 40.909 0.00 0.00 0.00 2.24
5308 6390 3.788227 TCAGACAGCACCCAAAATAGT 57.212 42.857 0.00 0.00 0.00 2.12
5309 6391 4.074970 AGTTCAGACAGCACCCAAAATAG 58.925 43.478 0.00 0.00 0.00 1.73
5310 6392 3.820467 CAGTTCAGACAGCACCCAAAATA 59.180 43.478 0.00 0.00 0.00 1.40
5311 6393 2.624838 CAGTTCAGACAGCACCCAAAAT 59.375 45.455 0.00 0.00 0.00 1.82
5312 6394 2.023673 CAGTTCAGACAGCACCCAAAA 58.976 47.619 0.00 0.00 0.00 2.44
5313 6395 1.679139 CAGTTCAGACAGCACCCAAA 58.321 50.000 0.00 0.00 0.00 3.28
5314 6396 0.819259 GCAGTTCAGACAGCACCCAA 60.819 55.000 0.00 0.00 38.11 4.12
5315 6397 1.227943 GCAGTTCAGACAGCACCCA 60.228 57.895 0.00 0.00 38.11 4.51
5316 6398 1.968540 GGCAGTTCAGACAGCACCC 60.969 63.158 0.00 0.00 39.79 4.61
5317 6399 0.321671 TAGGCAGTTCAGACAGCACC 59.678 55.000 0.00 0.00 39.79 5.01
5318 6400 2.169832 TTAGGCAGTTCAGACAGCAC 57.830 50.000 0.00 0.00 39.79 4.40
5319 6401 2.878406 GTTTTAGGCAGTTCAGACAGCA 59.122 45.455 0.00 0.00 39.79 4.41
5320 6402 2.096218 CGTTTTAGGCAGTTCAGACAGC 60.096 50.000 0.00 0.00 37.54 4.40
5321 6403 2.096218 GCGTTTTAGGCAGTTCAGACAG 60.096 50.000 0.00 0.00 0.00 3.51
5322 6404 1.871039 GCGTTTTAGGCAGTTCAGACA 59.129 47.619 0.00 0.00 0.00 3.41
5323 6405 1.197036 GGCGTTTTAGGCAGTTCAGAC 59.803 52.381 0.00 0.00 36.61 3.51
5324 6406 1.071699 AGGCGTTTTAGGCAGTTCAGA 59.928 47.619 0.00 0.00 39.37 3.27
5325 6407 1.523758 AGGCGTTTTAGGCAGTTCAG 58.476 50.000 0.00 0.00 39.37 3.02
5326 6408 1.975660 AAGGCGTTTTAGGCAGTTCA 58.024 45.000 0.00 0.00 39.37 3.18
5327 6409 2.809696 TGTAAGGCGTTTTAGGCAGTTC 59.190 45.455 0.00 0.00 39.37 3.01
5328 6410 2.853705 TGTAAGGCGTTTTAGGCAGTT 58.146 42.857 0.00 0.00 39.37 3.16
5329 6411 2.554370 TGTAAGGCGTTTTAGGCAGT 57.446 45.000 0.00 0.00 39.37 4.40
5330 6412 4.634443 ACTTATGTAAGGCGTTTTAGGCAG 59.366 41.667 0.00 0.00 37.62 4.85
5331 6413 4.393680 CACTTATGTAAGGCGTTTTAGGCA 59.606 41.667 0.00 0.00 37.62 4.75
5332 6414 4.632688 TCACTTATGTAAGGCGTTTTAGGC 59.367 41.667 0.00 0.00 37.62 3.93
5333 6415 6.148150 TGTTCACTTATGTAAGGCGTTTTAGG 59.852 38.462 0.00 0.00 37.62 2.69
5334 6416 7.117236 TCTGTTCACTTATGTAAGGCGTTTTAG 59.883 37.037 0.00 0.00 37.62 1.85
5335 6417 6.930164 TCTGTTCACTTATGTAAGGCGTTTTA 59.070 34.615 0.00 0.00 37.62 1.52
5336 6418 5.761234 TCTGTTCACTTATGTAAGGCGTTTT 59.239 36.000 0.00 0.00 37.62 2.43
5337 6419 5.302360 TCTGTTCACTTATGTAAGGCGTTT 58.698 37.500 0.00 0.00 37.62 3.60
5338 6420 4.890088 TCTGTTCACTTATGTAAGGCGTT 58.110 39.130 4.92 0.00 37.62 4.84
5339 6421 4.495422 CTCTGTTCACTTATGTAAGGCGT 58.505 43.478 4.92 0.00 37.62 5.68
5340 6422 3.865745 CCTCTGTTCACTTATGTAAGGCG 59.134 47.826 4.92 0.00 37.62 5.52
5341 6423 4.081087 TCCCTCTGTTCACTTATGTAAGGC 60.081 45.833 4.92 0.00 37.62 4.35
5342 6424 5.187967 ACTCCCTCTGTTCACTTATGTAAGG 59.812 44.000 4.92 0.00 37.62 2.69
5343 6425 6.287589 ACTCCCTCTGTTCACTTATGTAAG 57.712 41.667 0.00 0.00 39.18 2.34
5344 6426 6.127423 GCTACTCCCTCTGTTCACTTATGTAA 60.127 42.308 0.00 0.00 0.00 2.41
5345 6427 5.360144 GCTACTCCCTCTGTTCACTTATGTA 59.640 44.000 0.00 0.00 0.00 2.29
5346 6428 4.160626 GCTACTCCCTCTGTTCACTTATGT 59.839 45.833 0.00 0.00 0.00 2.29
5347 6429 4.160439 TGCTACTCCCTCTGTTCACTTATG 59.840 45.833 0.00 0.00 0.00 1.90
5348 6430 4.353777 TGCTACTCCCTCTGTTCACTTAT 58.646 43.478 0.00 0.00 0.00 1.73
5349 6431 3.774734 TGCTACTCCCTCTGTTCACTTA 58.225 45.455 0.00 0.00 0.00 2.24
5350 6432 2.609747 TGCTACTCCCTCTGTTCACTT 58.390 47.619 0.00 0.00 0.00 3.16
5351 6433 2.310779 TGCTACTCCCTCTGTTCACT 57.689 50.000 0.00 0.00 0.00 3.41
5352 6434 3.618690 AATGCTACTCCCTCTGTTCAC 57.381 47.619 0.00 0.00 0.00 3.18
5353 6435 5.957771 AATAATGCTACTCCCTCTGTTCA 57.042 39.130 0.00 0.00 0.00 3.18
5354 6436 6.116126 ACAAATAATGCTACTCCCTCTGTTC 58.884 40.000 0.00 0.00 0.00 3.18
5355 6437 6.067217 ACAAATAATGCTACTCCCTCTGTT 57.933 37.500 0.00 0.00 0.00 3.16
5356 6438 5.675538 GACAAATAATGCTACTCCCTCTGT 58.324 41.667 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.