Multiple sequence alignment - TraesCS7A01G228700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G228700 chr7A 100.000 5848 0 0 2045 7892 199017153 199011306 0.000000e+00 10800.0
1 TraesCS7A01G228700 chr7A 100.000 1751 0 0 1 1751 199019197 199017447 0.000000e+00 3234.0
2 TraesCS7A01G228700 chr7A 95.833 576 23 1 7318 7892 292633796 292634371 0.000000e+00 929.0
3 TraesCS7A01G228700 chr7A 82.990 194 29 3 728 919 654067359 654067550 1.050000e-38 172.0
4 TraesCS7A01G228700 chr7A 82.383 193 34 0 728 920 135684027 135684219 1.360000e-37 169.0
5 TraesCS7A01G228700 chr7B 95.345 2449 86 10 2045 4477 334810927 334808491 0.000000e+00 3866.0
6 TraesCS7A01G228700 chr7B 93.772 1686 82 6 4474 6157 334808452 334806788 0.000000e+00 2510.0
7 TraesCS7A01G228700 chr7B 95.773 828 26 4 933 1751 334811792 334810965 0.000000e+00 1327.0
8 TraesCS7A01G228700 chr7B 88.959 634 51 5 6154 6770 334806709 334806078 0.000000e+00 765.0
9 TraesCS7A01G228700 chr7B 80.539 334 33 16 6965 7278 334806048 334805727 2.220000e-55 228.0
10 TraesCS7A01G228700 chr7D 93.392 2285 106 19 4474 6740 190139723 190137466 0.000000e+00 3341.0
11 TraesCS7A01G228700 chr7D 96.322 1903 55 6 2590 4477 190141666 190139764 0.000000e+00 3112.0
12 TraesCS7A01G228700 chr7D 96.207 791 29 1 962 1751 190143007 190142217 0.000000e+00 1293.0
13 TraesCS7A01G228700 chr7D 97.749 533 11 1 2045 2576 190142180 190141648 0.000000e+00 917.0
14 TraesCS7A01G228700 chr7D 85.714 252 15 13 7054 7303 190134705 190134473 6.120000e-61 246.0
15 TraesCS7A01G228700 chr7D 84.974 193 28 1 728 920 185114154 185114345 2.250000e-45 195.0
16 TraesCS7A01G228700 chr7D 83.938 193 29 2 728 920 185121913 185122103 4.860000e-42 183.0
17 TraesCS7A01G228700 chr7D 97.297 37 1 0 933 969 190143347 190143311 6.610000e-06 63.9
18 TraesCS7A01G228700 chr3D 93.260 727 48 1 1 726 277450360 277451086 0.000000e+00 1070.0
19 TraesCS7A01G228700 chr3D 95.833 48 2 0 6909 6956 197419155 197419202 2.360000e-10 78.7
20 TraesCS7A01G228700 chr4D 93.122 727 48 2 1 726 287630279 287631004 0.000000e+00 1064.0
21 TraesCS7A01G228700 chr4D 92.985 727 50 1 1 726 301062212 301062938 0.000000e+00 1059.0
22 TraesCS7A01G228700 chrUn 92.985 727 49 2 1 726 112985325 112986050 0.000000e+00 1059.0
23 TraesCS7A01G228700 chrUn 97.778 45 1 0 6912 6956 317472271 317472315 2.360000e-10 78.7
24 TraesCS7A01G228700 chr2D 92.985 727 50 1 1 726 436400869 436401595 0.000000e+00 1059.0
25 TraesCS7A01G228700 chr2D 92.886 731 47 2 1 726 407417822 407418552 0.000000e+00 1057.0
26 TraesCS7A01G228700 chr1D 93.094 724 49 1 4 726 362391805 362391082 0.000000e+00 1059.0
27 TraesCS7A01G228700 chr1D 92.847 727 50 2 1 726 159011479 159012204 0.000000e+00 1053.0
28 TraesCS7A01G228700 chr1D 92.847 727 50 2 1 726 216466223 216466948 0.000000e+00 1053.0
29 TraesCS7A01G228700 chr1D 97.778 45 1 0 6912 6956 254490613 254490569 2.360000e-10 78.7
30 TraesCS7A01G228700 chr1D 97.778 45 1 0 6912 6956 293961135 293961179 2.360000e-10 78.7
31 TraesCS7A01G228700 chr1D 97.778 45 1 0 6912 6956 394179832 394179788 2.360000e-10 78.7
32 TraesCS7A01G228700 chr1A 95.826 575 21 3 7320 7892 454965972 454965399 0.000000e+00 926.0
33 TraesCS7A01G228700 chr1A 95.645 574 24 1 7320 7892 363218441 363217868 0.000000e+00 920.0
34 TraesCS7A01G228700 chr5A 95.819 574 20 3 7320 7892 384841729 384842299 0.000000e+00 924.0
35 TraesCS7A01G228700 chr5A 95.645 574 24 1 7320 7892 74237423 74237996 0.000000e+00 920.0
36 TraesCS7A01G228700 chr5A 83.684 190 29 2 728 916 555211412 555211224 2.260000e-40 178.0
37 TraesCS7A01G228700 chr4A 95.637 573 24 1 7320 7892 313213447 313212876 0.000000e+00 918.0
38 TraesCS7A01G228700 chr4A 94.576 590 29 3 7304 7892 448221849 448222436 0.000000e+00 909.0
39 TraesCS7A01G228700 chr3A 95.494 577 22 4 7318 7892 668056429 668057003 0.000000e+00 918.0
40 TraesCS7A01G228700 chr3A 84.974 193 29 0 728 920 709159582 709159774 6.250000e-46 196.0
41 TraesCS7A01G228700 chr6A 95.486 576 23 2 7320 7892 549804792 549804217 0.000000e+00 917.0
42 TraesCS7A01G228700 chr5B 85.492 193 28 0 728 920 671868050 671868242 1.340000e-47 202.0
43 TraesCS7A01G228700 chr3B 83.854 192 28 1 728 919 785492838 785493026 6.290000e-41 180.0
44 TraesCS7A01G228700 chr3B 96.970 33 1 0 6784 6816 536071921 536071889 1.000000e-03 56.5
45 TraesCS7A01G228700 chr6D 82.632 190 33 0 728 917 12465223 12465034 1.360000e-37 169.0
46 TraesCS7A01G228700 chr6D 97.778 45 1 0 6912 6956 101310873 101310829 2.360000e-10 78.7
47 TraesCS7A01G228700 chr6D 97.778 45 1 0 6912 6956 431400941 431400897 2.360000e-10 78.7
48 TraesCS7A01G228700 chr6D 97.778 45 1 0 6912 6956 431403298 431403342 2.360000e-10 78.7
49 TraesCS7A01G228700 chr6D 97.778 45 1 0 6912 6956 431403822 431403778 2.360000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G228700 chr7A 199011306 199019197 7891 True 7017.000000 10800 100.000000 1 7892 2 chr7A.!!$R1 7891
1 TraesCS7A01G228700 chr7A 292633796 292634371 575 False 929.000000 929 95.833000 7318 7892 1 chr7A.!!$F2 574
2 TraesCS7A01G228700 chr7B 334805727 334811792 6065 True 1739.200000 3866 90.877600 933 7278 5 chr7B.!!$R1 6345
3 TraesCS7A01G228700 chr7D 190134473 190143347 8874 True 1495.483333 3341 94.446833 933 7303 6 chr7D.!!$R1 6370
4 TraesCS7A01G228700 chr3D 277450360 277451086 726 False 1070.000000 1070 93.260000 1 726 1 chr3D.!!$F2 725
5 TraesCS7A01G228700 chr4D 287630279 287631004 725 False 1064.000000 1064 93.122000 1 726 1 chr4D.!!$F1 725
6 TraesCS7A01G228700 chr4D 301062212 301062938 726 False 1059.000000 1059 92.985000 1 726 1 chr4D.!!$F2 725
7 TraesCS7A01G228700 chrUn 112985325 112986050 725 False 1059.000000 1059 92.985000 1 726 1 chrUn.!!$F1 725
8 TraesCS7A01G228700 chr2D 436400869 436401595 726 False 1059.000000 1059 92.985000 1 726 1 chr2D.!!$F2 725
9 TraesCS7A01G228700 chr2D 407417822 407418552 730 False 1057.000000 1057 92.886000 1 726 1 chr2D.!!$F1 725
10 TraesCS7A01G228700 chr1D 362391082 362391805 723 True 1059.000000 1059 93.094000 4 726 1 chr1D.!!$R2 722
11 TraesCS7A01G228700 chr1D 159011479 159012204 725 False 1053.000000 1053 92.847000 1 726 1 chr1D.!!$F1 725
12 TraesCS7A01G228700 chr1D 216466223 216466948 725 False 1053.000000 1053 92.847000 1 726 1 chr1D.!!$F2 725
13 TraesCS7A01G228700 chr1A 454965399 454965972 573 True 926.000000 926 95.826000 7320 7892 1 chr1A.!!$R2 572
14 TraesCS7A01G228700 chr1A 363217868 363218441 573 True 920.000000 920 95.645000 7320 7892 1 chr1A.!!$R1 572
15 TraesCS7A01G228700 chr5A 384841729 384842299 570 False 924.000000 924 95.819000 7320 7892 1 chr5A.!!$F2 572
16 TraesCS7A01G228700 chr5A 74237423 74237996 573 False 920.000000 920 95.645000 7320 7892 1 chr5A.!!$F1 572
17 TraesCS7A01G228700 chr4A 313212876 313213447 571 True 918.000000 918 95.637000 7320 7892 1 chr4A.!!$R1 572
18 TraesCS7A01G228700 chr4A 448221849 448222436 587 False 909.000000 909 94.576000 7304 7892 1 chr4A.!!$F1 588
19 TraesCS7A01G228700 chr3A 668056429 668057003 574 False 918.000000 918 95.494000 7318 7892 1 chr3A.!!$F1 574
20 TraesCS7A01G228700 chr6A 549804217 549804792 575 True 917.000000 917 95.486000 7320 7892 1 chr6A.!!$R1 572


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
826 833 0.098376 GCCTTCAGCTCGCTTCAATG 59.902 55.000 0.00 0.00 38.99 2.82 F
848 855 0.973632 TGTAGTCGTTGCTGGATGGT 59.026 50.000 0.00 0.00 0.00 3.55 F
2823 3152 0.461961 ATGCTAGCTCCGGTGACTTC 59.538 55.000 17.23 1.43 0.00 3.01 F
3186 3515 1.042229 AGCAAGTCTTGGCAATGCAA 58.958 45.000 21.57 0.00 39.42 4.08 F
4296 4626 2.367241 TCCATTGACTTGGTCTCGAACA 59.633 45.455 0.00 0.00 38.01 3.18 F
5663 6057 0.178068 GTCCCGGCTTTCTGCTATGA 59.822 55.000 0.00 0.00 42.39 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2823 3152 4.487714 TGCAAATTCCCTCCTAGTACAG 57.512 45.455 0.00 0.00 0.00 2.74 R
2895 3224 7.062255 GCAAAGCTCAGATGTTTTGTAAATACC 59.938 37.037 0.00 0.00 34.04 2.73 R
3897 4226 0.461548 TTGCAACCAATTGACGGCAA 59.538 45.000 5.94 5.94 38.15 4.52 R
4457 4803 0.954452 GAACAGACCCTGCAACCAAG 59.046 55.000 0.00 0.00 34.37 3.61 R
5920 6314 1.606668 GCCATGACCTCTAGACTCTCG 59.393 57.143 0.00 0.00 0.00 4.04 R
6943 7444 0.172578 GCCTCCCAAATTGGCGTTAC 59.827 55.000 6.48 0.00 35.79 2.50 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.133253 CAGGCAGACACGCATTTCG 59.867 57.895 0.00 0.00 45.38 3.46
123 124 3.586470 TGTTTAGCTTCAAGGGTGGAA 57.414 42.857 0.00 0.00 0.00 3.53
135 136 2.062636 AGGGTGGAATGTTGGTAGTGT 58.937 47.619 0.00 0.00 0.00 3.55
144 145 5.163602 GGAATGTTGGTAGTGTGACACAAAA 60.164 40.000 18.95 3.58 36.74 2.44
152 153 5.813672 GGTAGTGTGACACAAAACAAGTAGA 59.186 40.000 18.95 0.00 36.74 2.59
155 156 5.703592 AGTGTGACACAAAACAAGTAGACAA 59.296 36.000 18.95 0.00 36.74 3.18
207 208 7.744715 GTCTATGTAAAAACTGGAAATGACACG 59.255 37.037 0.00 0.00 0.00 4.49
232 233 5.733676 TCTTTCTATACAATGCAGTGCTCA 58.266 37.500 15.18 0.00 0.00 4.26
264 270 5.890752 ATGATGGAAGAGATCACACAGAT 57.109 39.130 0.00 0.00 40.48 2.90
440 447 4.391155 ACTGCAGTAAAATACCGTCCAAA 58.609 39.130 20.16 0.00 0.00 3.28
459 466 7.324616 CGTCCAAAATCTGAATCAAGAAGTTTC 59.675 37.037 0.00 0.00 0.00 2.78
467 474 7.911651 TCTGAATCAAGAAGTTTCTCTACCAT 58.088 34.615 0.00 0.00 36.28 3.55
561 568 5.659440 ATCAATAAACCTGTTCCGCAATT 57.341 34.783 0.00 0.00 0.00 2.32
602 609 6.148150 GTCACTACGACCAACAATCCAAAATA 59.852 38.462 0.00 0.00 38.85 1.40
624 631 4.817874 ACTAGTGTCTATTCCTAGGGCT 57.182 45.455 9.46 0.00 33.93 5.19
693 700 5.796350 AATACGTCTGAACCATTAAGTGC 57.204 39.130 0.00 0.00 0.00 4.40
718 725 2.497107 GCACTCAGCACACAACAAAT 57.503 45.000 0.00 0.00 44.79 2.32
726 733 4.826733 TCAGCACACAACAAATCCTAATGT 59.173 37.500 0.00 0.00 0.00 2.71
727 734 5.048782 TCAGCACACAACAAATCCTAATGTC 60.049 40.000 0.00 0.00 0.00 3.06
728 735 5.048504 CAGCACACAACAAATCCTAATGTCT 60.049 40.000 0.00 0.00 0.00 3.41
729 736 5.536161 AGCACACAACAAATCCTAATGTCTT 59.464 36.000 0.00 0.00 0.00 3.01
730 737 6.714810 AGCACACAACAAATCCTAATGTCTTA 59.285 34.615 0.00 0.00 0.00 2.10
731 738 7.023575 GCACACAACAAATCCTAATGTCTTAG 58.976 38.462 0.00 0.00 35.15 2.18
732 739 7.023575 CACACAACAAATCCTAATGTCTTAGC 58.976 38.462 0.00 0.00 34.21 3.09
733 740 6.714810 ACACAACAAATCCTAATGTCTTAGCA 59.285 34.615 0.00 0.00 34.21 3.49
734 741 7.394359 ACACAACAAATCCTAATGTCTTAGCAT 59.606 33.333 0.00 0.00 34.21 3.79
735 742 7.699391 CACAACAAATCCTAATGTCTTAGCATG 59.301 37.037 0.00 0.00 34.21 4.06
736 743 7.611467 ACAACAAATCCTAATGTCTTAGCATGA 59.389 33.333 0.00 0.00 34.21 3.07
737 744 7.559590 ACAAATCCTAATGTCTTAGCATGAC 57.440 36.000 0.00 0.00 34.21 3.06
738 745 6.258727 ACAAATCCTAATGTCTTAGCATGACG 59.741 38.462 0.00 0.00 37.26 4.35
739 746 5.791336 ATCCTAATGTCTTAGCATGACGA 57.209 39.130 0.00 0.00 37.26 4.20
740 747 4.933330 TCCTAATGTCTTAGCATGACGAC 58.067 43.478 0.00 0.00 37.26 4.34
741 748 4.645136 TCCTAATGTCTTAGCATGACGACT 59.355 41.667 0.00 0.00 37.26 4.18
742 749 5.127194 TCCTAATGTCTTAGCATGACGACTT 59.873 40.000 0.00 0.00 37.26 3.01
743 750 5.812642 CCTAATGTCTTAGCATGACGACTTT 59.187 40.000 0.00 4.10 37.26 2.66
744 751 5.786401 AATGTCTTAGCATGACGACTTTC 57.214 39.130 0.00 0.00 37.26 2.62
745 752 3.585862 TGTCTTAGCATGACGACTTTCC 58.414 45.455 0.00 0.00 37.26 3.13
746 753 2.599082 GTCTTAGCATGACGACTTTCCG 59.401 50.000 0.00 0.00 0.00 4.30
747 754 2.490509 TCTTAGCATGACGACTTTCCGA 59.509 45.455 0.00 0.00 0.00 4.55
748 755 2.273370 TAGCATGACGACTTTCCGAC 57.727 50.000 0.00 0.00 0.00 4.79
749 756 0.603569 AGCATGACGACTTTCCGACT 59.396 50.000 0.00 0.00 0.00 4.18
750 757 0.716108 GCATGACGACTTTCCGACTG 59.284 55.000 0.00 0.00 0.00 3.51
751 758 1.935300 GCATGACGACTTTCCGACTGT 60.935 52.381 0.00 0.00 0.00 3.55
752 759 1.986378 CATGACGACTTTCCGACTGTC 59.014 52.381 0.00 0.00 0.00 3.51
753 760 1.315690 TGACGACTTTCCGACTGTCT 58.684 50.000 6.21 0.00 0.00 3.41
754 761 2.497138 TGACGACTTTCCGACTGTCTA 58.503 47.619 6.21 0.00 0.00 2.59
755 762 3.079578 TGACGACTTTCCGACTGTCTAT 58.920 45.455 6.21 0.00 0.00 1.98
756 763 3.504906 TGACGACTTTCCGACTGTCTATT 59.495 43.478 6.21 0.00 0.00 1.73
757 764 4.696877 TGACGACTTTCCGACTGTCTATTA 59.303 41.667 6.21 0.00 0.00 0.98
758 765 5.356190 TGACGACTTTCCGACTGTCTATTAT 59.644 40.000 6.21 0.00 0.00 1.28
759 766 6.539826 TGACGACTTTCCGACTGTCTATTATA 59.460 38.462 6.21 0.00 0.00 0.98
760 767 7.066163 TGACGACTTTCCGACTGTCTATTATAA 59.934 37.037 6.21 0.00 0.00 0.98
761 768 7.192232 ACGACTTTCCGACTGTCTATTATAAC 58.808 38.462 6.21 0.00 0.00 1.89
762 769 7.148188 ACGACTTTCCGACTGTCTATTATAACA 60.148 37.037 6.21 0.00 0.00 2.41
763 770 7.699391 CGACTTTCCGACTGTCTATTATAACAA 59.301 37.037 6.21 0.00 0.00 2.83
764 771 8.928270 ACTTTCCGACTGTCTATTATAACAAG 57.072 34.615 6.21 0.00 0.00 3.16
765 772 8.529476 ACTTTCCGACTGTCTATTATAACAAGT 58.471 33.333 6.21 0.00 0.00 3.16
766 773 9.367444 CTTTCCGACTGTCTATTATAACAAGTT 57.633 33.333 6.21 0.00 0.00 2.66
767 774 8.697846 TTCCGACTGTCTATTATAACAAGTTG 57.302 34.615 6.21 0.00 0.00 3.16
768 775 7.833786 TCCGACTGTCTATTATAACAAGTTGT 58.166 34.615 1.64 1.64 0.00 3.32
769 776 7.758076 TCCGACTGTCTATTATAACAAGTTGTG 59.242 37.037 9.79 0.00 0.00 3.33
770 777 7.391786 CGACTGTCTATTATAACAAGTTGTGC 58.608 38.462 9.79 0.00 0.00 4.57
771 778 7.464178 CGACTGTCTATTATAACAAGTTGTGCC 60.464 40.741 9.79 0.00 0.00 5.01
772 779 6.598064 ACTGTCTATTATAACAAGTTGTGCCC 59.402 38.462 9.79 0.00 0.00 5.36
773 780 6.717289 TGTCTATTATAACAAGTTGTGCCCT 58.283 36.000 9.79 0.00 0.00 5.19
774 781 6.597672 TGTCTATTATAACAAGTTGTGCCCTG 59.402 38.462 9.79 0.00 0.00 4.45
775 782 4.718940 ATTATAACAAGTTGTGCCCTGC 57.281 40.909 9.79 0.00 0.00 4.85
776 783 2.292828 ATAACAAGTTGTGCCCTGCT 57.707 45.000 9.79 0.00 0.00 4.24
777 784 2.065899 TAACAAGTTGTGCCCTGCTT 57.934 45.000 9.79 0.00 0.00 3.91
778 785 0.746659 AACAAGTTGTGCCCTGCTTC 59.253 50.000 9.79 0.00 0.00 3.86
779 786 1.283793 CAAGTTGTGCCCTGCTTCG 59.716 57.895 0.00 0.00 0.00 3.79
780 787 1.148273 AAGTTGTGCCCTGCTTCGA 59.852 52.632 0.00 0.00 0.00 3.71
781 788 0.465460 AAGTTGTGCCCTGCTTCGAA 60.465 50.000 0.00 0.00 0.00 3.71
782 789 0.886490 AGTTGTGCCCTGCTTCGAAG 60.886 55.000 21.02 21.02 0.00 3.79
783 790 0.884704 GTTGTGCCCTGCTTCGAAGA 60.885 55.000 28.95 12.53 0.00 2.87
784 791 0.603707 TTGTGCCCTGCTTCGAAGAG 60.604 55.000 28.95 20.24 38.43 2.85
785 792 1.004440 GTGCCCTGCTTCGAAGAGT 60.004 57.895 28.95 0.00 38.43 3.24
786 793 1.004560 TGCCCTGCTTCGAAGAGTG 60.005 57.895 28.95 15.81 38.43 3.51
787 794 1.293498 GCCCTGCTTCGAAGAGTGA 59.707 57.895 28.95 7.78 38.43 3.41
788 795 0.739112 GCCCTGCTTCGAAGAGTGAG 60.739 60.000 28.95 16.10 38.43 3.51
789 796 0.891373 CCCTGCTTCGAAGAGTGAGA 59.109 55.000 28.95 3.64 38.43 3.27
790 797 1.135141 CCCTGCTTCGAAGAGTGAGAG 60.135 57.143 28.95 12.25 38.43 3.20
791 798 1.135141 CCTGCTTCGAAGAGTGAGAGG 60.135 57.143 28.95 16.69 38.43 3.69
792 799 0.244994 TGCTTCGAAGAGTGAGAGGC 59.755 55.000 28.95 11.12 38.43 4.70
793 800 0.800300 GCTTCGAAGAGTGAGAGGCG 60.800 60.000 28.95 0.00 38.43 5.52
794 801 0.805614 CTTCGAAGAGTGAGAGGCGA 59.194 55.000 20.74 0.00 38.43 5.54
795 802 1.403679 CTTCGAAGAGTGAGAGGCGAT 59.596 52.381 20.74 0.00 38.43 4.58
796 803 0.735471 TCGAAGAGTGAGAGGCGATG 59.265 55.000 0.00 0.00 0.00 3.84
797 804 0.735471 CGAAGAGTGAGAGGCGATGA 59.265 55.000 0.00 0.00 0.00 2.92
798 805 1.532921 CGAAGAGTGAGAGGCGATGAC 60.533 57.143 0.00 0.00 0.00 3.06
799 806 0.453793 AAGAGTGAGAGGCGATGACG 59.546 55.000 0.00 0.00 42.93 4.35
800 807 1.064946 GAGTGAGAGGCGATGACGG 59.935 63.158 0.00 0.00 40.15 4.79
801 808 1.658686 GAGTGAGAGGCGATGACGGT 61.659 60.000 0.00 0.00 40.15 4.83
802 809 1.517257 GTGAGAGGCGATGACGGTG 60.517 63.158 0.00 0.00 40.15 4.94
803 810 2.105128 GAGAGGCGATGACGGTGG 59.895 66.667 0.00 0.00 40.15 4.61
804 811 4.148825 AGAGGCGATGACGGTGGC 62.149 66.667 0.00 0.00 40.15 5.01
822 829 3.858989 GCGCCTTCAGCTCGCTTC 61.859 66.667 9.28 0.00 44.79 3.86
823 830 2.433145 CGCCTTCAGCTCGCTTCA 60.433 61.111 0.00 0.00 40.39 3.02
824 831 2.029288 CGCCTTCAGCTCGCTTCAA 61.029 57.895 0.00 0.00 40.39 2.69
825 832 1.364626 CGCCTTCAGCTCGCTTCAAT 61.365 55.000 0.00 0.00 40.39 2.57
826 833 0.098376 GCCTTCAGCTCGCTTCAATG 59.902 55.000 0.00 0.00 38.99 2.82
827 834 1.446907 CCTTCAGCTCGCTTCAATGT 58.553 50.000 0.00 0.00 0.00 2.71
828 835 1.808945 CCTTCAGCTCGCTTCAATGTT 59.191 47.619 0.00 0.00 0.00 2.71
829 836 2.227388 CCTTCAGCTCGCTTCAATGTTT 59.773 45.455 0.00 0.00 0.00 2.83
830 837 2.975410 TCAGCTCGCTTCAATGTTTG 57.025 45.000 0.00 0.00 0.00 2.93
831 838 2.221169 TCAGCTCGCTTCAATGTTTGT 58.779 42.857 0.00 0.00 0.00 2.83
832 839 3.398406 TCAGCTCGCTTCAATGTTTGTA 58.602 40.909 0.00 0.00 0.00 2.41
833 840 3.433274 TCAGCTCGCTTCAATGTTTGTAG 59.567 43.478 0.00 0.00 0.00 2.74
834 841 3.187227 CAGCTCGCTTCAATGTTTGTAGT 59.813 43.478 0.00 0.00 31.53 2.73
835 842 3.433615 AGCTCGCTTCAATGTTTGTAGTC 59.566 43.478 0.00 0.00 31.53 2.59
836 843 3.722082 GCTCGCTTCAATGTTTGTAGTCG 60.722 47.826 0.00 0.00 33.03 4.18
837 844 3.386486 TCGCTTCAATGTTTGTAGTCGT 58.614 40.909 8.92 0.00 33.28 4.34
838 845 3.805422 TCGCTTCAATGTTTGTAGTCGTT 59.195 39.130 8.92 0.00 33.28 3.85
839 846 3.900116 CGCTTCAATGTTTGTAGTCGTTG 59.100 43.478 0.00 0.00 31.53 4.10
840 847 3.664025 GCTTCAATGTTTGTAGTCGTTGC 59.336 43.478 0.00 0.00 31.53 4.17
841 848 4.554723 GCTTCAATGTTTGTAGTCGTTGCT 60.555 41.667 0.00 0.00 31.53 3.91
842 849 4.466567 TCAATGTTTGTAGTCGTTGCTG 57.533 40.909 0.00 0.00 32.59 4.41
843 850 3.249799 TCAATGTTTGTAGTCGTTGCTGG 59.750 43.478 0.00 0.00 32.59 4.85
844 851 2.605837 TGTTTGTAGTCGTTGCTGGA 57.394 45.000 0.00 0.00 0.00 3.86
845 852 3.120321 TGTTTGTAGTCGTTGCTGGAT 57.880 42.857 0.00 0.00 0.00 3.41
846 853 2.805671 TGTTTGTAGTCGTTGCTGGATG 59.194 45.455 0.00 0.00 0.00 3.51
847 854 2.093306 TTGTAGTCGTTGCTGGATGG 57.907 50.000 0.00 0.00 0.00 3.51
848 855 0.973632 TGTAGTCGTTGCTGGATGGT 59.026 50.000 0.00 0.00 0.00 3.55
849 856 1.067142 TGTAGTCGTTGCTGGATGGTC 60.067 52.381 0.00 0.00 0.00 4.02
850 857 1.204941 GTAGTCGTTGCTGGATGGTCT 59.795 52.381 0.00 0.00 0.00 3.85
851 858 1.557099 AGTCGTTGCTGGATGGTCTA 58.443 50.000 0.00 0.00 0.00 2.59
852 859 2.111384 AGTCGTTGCTGGATGGTCTAT 58.889 47.619 0.00 0.00 0.00 1.98
853 860 2.159043 AGTCGTTGCTGGATGGTCTATG 60.159 50.000 0.00 0.00 0.00 2.23
854 861 2.107366 TCGTTGCTGGATGGTCTATGA 58.893 47.619 0.00 0.00 0.00 2.15
855 862 2.499693 TCGTTGCTGGATGGTCTATGAA 59.500 45.455 0.00 0.00 0.00 2.57
856 863 3.134623 TCGTTGCTGGATGGTCTATGAAT 59.865 43.478 0.00 0.00 0.00 2.57
857 864 3.496130 CGTTGCTGGATGGTCTATGAATC 59.504 47.826 0.00 0.00 0.00 2.52
858 865 4.712476 GTTGCTGGATGGTCTATGAATCT 58.288 43.478 0.00 0.00 0.00 2.40
859 866 4.347360 TGCTGGATGGTCTATGAATCTG 57.653 45.455 0.00 0.00 0.00 2.90
860 867 3.072038 TGCTGGATGGTCTATGAATCTGG 59.928 47.826 0.00 0.00 0.00 3.86
861 868 3.326006 GCTGGATGGTCTATGAATCTGGA 59.674 47.826 0.00 0.00 0.00 3.86
862 869 4.802248 GCTGGATGGTCTATGAATCTGGAC 60.802 50.000 0.00 0.00 0.00 4.02
863 870 3.321968 TGGATGGTCTATGAATCTGGACG 59.678 47.826 0.00 0.00 0.00 4.79
864 871 3.322254 GGATGGTCTATGAATCTGGACGT 59.678 47.826 0.00 0.00 0.00 4.34
865 872 4.523173 GGATGGTCTATGAATCTGGACGTA 59.477 45.833 0.00 0.00 0.00 3.57
866 873 5.010719 GGATGGTCTATGAATCTGGACGTAA 59.989 44.000 0.00 0.00 0.00 3.18
867 874 6.295349 GGATGGTCTATGAATCTGGACGTAAT 60.295 42.308 0.00 0.00 0.00 1.89
868 875 6.479972 TGGTCTATGAATCTGGACGTAATT 57.520 37.500 0.00 0.00 0.00 1.40
869 876 6.884832 TGGTCTATGAATCTGGACGTAATTT 58.115 36.000 0.00 0.00 0.00 1.82
870 877 7.335627 TGGTCTATGAATCTGGACGTAATTTT 58.664 34.615 0.00 0.00 0.00 1.82
871 878 7.494625 TGGTCTATGAATCTGGACGTAATTTTC 59.505 37.037 0.00 0.00 0.00 2.29
872 879 7.494625 GGTCTATGAATCTGGACGTAATTTTCA 59.505 37.037 0.00 0.00 0.00 2.69
873 880 9.046296 GTCTATGAATCTGGACGTAATTTTCAT 57.954 33.333 13.97 13.97 36.57 2.57
874 881 9.613428 TCTATGAATCTGGACGTAATTTTCATT 57.387 29.630 14.45 0.00 34.94 2.57
880 887 9.716507 AATCTGGACGTAATTTTCATTATTTCG 57.283 29.630 0.00 0.00 33.69 3.46
881 888 7.690228 TCTGGACGTAATTTTCATTATTTCGG 58.310 34.615 0.00 0.00 32.35 4.30
882 889 6.787225 TGGACGTAATTTTCATTATTTCGGG 58.213 36.000 0.00 0.00 32.35 5.14
883 890 6.374894 TGGACGTAATTTTCATTATTTCGGGT 59.625 34.615 0.00 0.00 32.35 5.28
884 891 6.689669 GGACGTAATTTTCATTATTTCGGGTG 59.310 38.462 0.00 0.00 32.35 4.61
885 892 7.148355 ACGTAATTTTCATTATTTCGGGTGT 57.852 32.000 0.00 0.00 32.35 4.16
886 893 7.595604 ACGTAATTTTCATTATTTCGGGTGTT 58.404 30.769 0.00 0.00 32.35 3.32
887 894 8.083462 ACGTAATTTTCATTATTTCGGGTGTTT 58.917 29.630 0.00 0.00 32.35 2.83
888 895 9.557338 CGTAATTTTCATTATTTCGGGTGTTTA 57.443 29.630 0.00 0.00 0.00 2.01
892 899 9.936759 ATTTTCATTATTTCGGGTGTTTATTGT 57.063 25.926 0.00 0.00 0.00 2.71
894 901 9.843334 TTTCATTATTTCGGGTGTTTATTGTAC 57.157 29.630 0.00 0.00 0.00 2.90
895 902 8.795842 TCATTATTTCGGGTGTTTATTGTACT 57.204 30.769 0.00 0.00 0.00 2.73
896 903 9.233649 TCATTATTTCGGGTGTTTATTGTACTT 57.766 29.630 0.00 0.00 0.00 2.24
897 904 9.849166 CATTATTTCGGGTGTTTATTGTACTTT 57.151 29.630 0.00 0.00 0.00 2.66
899 906 6.939132 TTTCGGGTGTTTATTGTACTTTCA 57.061 33.333 0.00 0.00 0.00 2.69
900 907 7.513371 TTTCGGGTGTTTATTGTACTTTCAT 57.487 32.000 0.00 0.00 0.00 2.57
901 908 6.489127 TCGGGTGTTTATTGTACTTTCATG 57.511 37.500 0.00 0.00 0.00 3.07
902 909 6.231951 TCGGGTGTTTATTGTACTTTCATGA 58.768 36.000 0.00 0.00 0.00 3.07
903 910 6.882140 TCGGGTGTTTATTGTACTTTCATGAT 59.118 34.615 0.00 0.00 0.00 2.45
904 911 7.392113 TCGGGTGTTTATTGTACTTTCATGATT 59.608 33.333 0.00 0.00 0.00 2.57
905 912 7.484641 CGGGTGTTTATTGTACTTTCATGATTG 59.515 37.037 0.00 0.00 0.00 2.67
906 913 8.519526 GGGTGTTTATTGTACTTTCATGATTGA 58.480 33.333 0.00 0.00 0.00 2.57
907 914 9.906660 GGTGTTTATTGTACTTTCATGATTGAA 57.093 29.630 0.00 0.00 40.09 2.69
979 1297 5.047519 TCGATAAAGAAAAACCGACTCCTCT 60.048 40.000 0.00 0.00 0.00 3.69
1041 1360 3.598327 CCGGCGGCATAAAAACCT 58.402 55.556 15.42 0.00 0.00 3.50
1186 1505 1.078848 GGTGTCTGCTAGCTGGGTG 60.079 63.158 20.06 4.23 0.00 4.61
1262 1581 4.029809 CGGCGGAAAAGGGGAGGT 62.030 66.667 0.00 0.00 0.00 3.85
1295 1614 2.580867 CTGAGTACGCTGCTCGCC 60.581 66.667 0.00 0.00 43.23 5.54
1410 1729 3.124921 GTGGTCGGATTGGGTGCG 61.125 66.667 0.00 0.00 43.73 5.34
1413 1732 2.818274 GTCGGATTGGGTGCGTCC 60.818 66.667 0.00 0.00 42.81 4.79
1481 1800 3.116079 GAAGTGTAAGTTCGTCCCCAA 57.884 47.619 0.00 0.00 36.41 4.12
1487 1806 4.393990 GTGTAAGTTCGTCCCCAATTTAGG 59.606 45.833 0.00 0.00 0.00 2.69
1498 1817 3.777522 CCCCAATTTAGGCCCAACAATAA 59.222 43.478 0.00 0.00 0.00 1.40
1505 1824 8.888716 CAATTTAGGCCCAACAATAAAAATACC 58.111 33.333 0.00 0.00 0.00 2.73
1550 1869 2.251818 AGAGGAAGTACAGCAGAGCAA 58.748 47.619 0.00 0.00 0.00 3.91
1555 1874 4.163078 AGGAAGTACAGCAGAGCAATGTAT 59.837 41.667 0.00 0.00 32.45 2.29
1566 1885 7.543172 CAGCAGAGCAATGTATAATTTGTTTGT 59.457 33.333 0.00 0.00 0.00 2.83
1571 1890 9.503427 GAGCAATGTATAATTTGTTTGTACCTC 57.497 33.333 0.00 0.00 32.53 3.85
1691 2018 4.163458 TGTTGGGAACTGTCTACTCTTGTT 59.837 41.667 0.00 0.00 0.00 2.83
1716 2043 4.184629 ACTTTAATCTCTGCTAACCTGCG 58.815 43.478 0.00 0.00 35.36 5.18
2092 2420 9.349713 AGAACTAGATAAACAATTTGAACACCA 57.650 29.630 2.79 0.00 0.00 4.17
2195 2523 1.741706 CCTGAAGATGATGCAAGCGTT 59.258 47.619 0.00 0.00 0.00 4.84
2373 2702 3.838244 TGAAGAAGCTACAGGTGTGTT 57.162 42.857 0.00 0.00 38.19 3.32
2421 2750 9.895138 TTAATTTAGGTTTCAGTATGGTACCTC 57.105 33.333 14.36 3.90 43.54 3.85
2440 2769 8.841300 GGTACCTCATATGAAAAATCTTCCTTC 58.159 37.037 4.06 0.00 0.00 3.46
2670 2999 9.526713 TTAAGTGTTTATGTAGTTTACACGACA 57.473 29.630 0.00 0.00 42.05 4.35
2721 3050 5.975988 ATCCCTTTCAGCCTAATTGTCTA 57.024 39.130 0.00 0.00 0.00 2.59
2722 3051 5.772393 TCCCTTTCAGCCTAATTGTCTAA 57.228 39.130 0.00 0.00 0.00 2.10
2823 3152 0.461961 ATGCTAGCTCCGGTGACTTC 59.538 55.000 17.23 1.43 0.00 3.01
2895 3224 3.201290 AGAGAGGTAATGAAGCAATGCG 58.799 45.455 0.00 0.00 0.00 4.73
2934 3263 3.995705 TGAGCTTTGCATGCCATTTTAAC 59.004 39.130 16.68 0.80 0.00 2.01
3141 3470 9.716531 TTACATCTCAAAGATAGGCTTCATATG 57.283 33.333 0.00 0.00 35.24 1.78
3186 3515 1.042229 AGCAAGTCTTGGCAATGCAA 58.958 45.000 21.57 0.00 39.42 4.08
3228 3557 6.901887 GTGCTTATGTATGATTTCGTGTTGAG 59.098 38.462 0.00 0.00 0.00 3.02
3367 3696 6.785337 TCATTGGATTTTCAGATGCTGATT 57.215 33.333 0.00 0.00 40.39 2.57
3978 4307 5.959618 GGCTTACCAAGACTACATTTGTT 57.040 39.130 0.00 0.00 32.23 2.83
4022 4351 3.685139 TTTTAGTGACTGGGAGCTCTG 57.315 47.619 14.64 7.01 0.00 3.35
4102 4432 3.766051 TCAGTGTAGTCATGCATCTCTGT 59.234 43.478 0.00 0.00 0.00 3.41
4140 4470 7.656707 ATTGTTTGGCTTATTTTTGCTACTG 57.343 32.000 0.00 0.00 0.00 2.74
4278 4608 2.689691 GGCAGGGCCCTTACATCCA 61.690 63.158 26.10 0.00 44.06 3.41
4296 4626 2.367241 TCCATTGACTTGGTCTCGAACA 59.633 45.455 0.00 0.00 38.01 3.18
4307 4637 3.181470 TGGTCTCGAACACAGTCAATTGA 60.181 43.478 3.38 3.38 0.00 2.57
4457 4803 4.184629 CACCAGATTAGAGTTGGCACTAC 58.815 47.826 0.00 0.00 35.35 2.73
4479 4869 0.883833 GGTTGCAGGGTCTGTTCATG 59.116 55.000 0.00 0.00 33.43 3.07
4493 4883 1.080638 TTCATGCTAGGGTGGGGTTT 58.919 50.000 0.00 0.00 0.00 3.27
4565 4955 4.286297 TGGGGAAGACAAATAGACAGTG 57.714 45.455 0.00 0.00 0.00 3.66
4621 5013 1.207329 GAACCCCGACTATCTTGCACT 59.793 52.381 0.00 0.00 0.00 4.40
4691 5083 0.613572 CCACCACCCATGTTTACCCC 60.614 60.000 0.00 0.00 0.00 4.95
4764 5156 5.221224 CCTCACTGCTTATTGTTTTGTCCAA 60.221 40.000 0.00 0.00 0.00 3.53
4853 5247 7.716799 TGAATTCCCTATAACACTTTGCAAT 57.283 32.000 0.00 0.00 0.00 3.56
4976 5370 4.997395 GCATGGTCTGTTTTCTCTGTTCTA 59.003 41.667 0.00 0.00 0.00 2.10
5048 5442 2.959516 TGGAGCTCGTGTTATCAAGTG 58.040 47.619 7.83 0.00 0.00 3.16
5393 5787 6.238211 GCTGACTATTTTCTGTATGAACGCAT 60.238 38.462 0.00 0.00 38.54 4.73
5406 5800 3.064207 TGAACGCATCAGTACAAGAACC 58.936 45.455 0.00 0.00 33.04 3.62
5413 5807 2.479837 TCAGTACAAGAACCGTTGCTG 58.520 47.619 0.00 0.00 0.00 4.41
5443 5837 9.409312 CTAGATATTGCTCTCTAGTGTCATTTG 57.591 37.037 0.00 0.00 37.34 2.32
5478 5872 3.500448 TGCCAACATCAGTAAGTGGAA 57.500 42.857 0.00 0.00 0.00 3.53
5586 5980 2.360852 GGCTGCTGCACTGACCAT 60.361 61.111 17.89 0.00 41.91 3.55
5663 6057 0.178068 GTCCCGGCTTTCTGCTATGA 59.822 55.000 0.00 0.00 42.39 2.15
5849 6243 7.325579 CAGACTTGCTAAAAGAAAAATCAGCTC 59.674 37.037 0.00 0.00 0.00 4.09
5920 6314 3.668447 CATGTATGATAGACTGGCCACC 58.332 50.000 0.00 0.00 0.00 4.61
5974 6368 4.073293 TCTGGAAAAGTTGTCCTCTGAC 57.927 45.455 13.44 0.00 42.12 3.51
6013 6407 3.648179 GCTGTCACTGAAGCTAAATCG 57.352 47.619 0.00 0.00 36.47 3.34
6072 6466 9.338622 GCTAAGGTATGTCATTATACAACCTTT 57.661 33.333 16.85 5.82 42.11 3.11
6090 6484 8.843262 ACAACCTTTACTTTTGGTTATGAGTAC 58.157 33.333 0.00 0.00 41.57 2.73
6093 6487 9.582648 ACCTTTACTTTTGGTTATGAGTACATT 57.417 29.630 0.00 0.00 37.87 2.71
6099 6493 8.999431 ACTTTTGGTTATGAGTACATTGTACTG 58.001 33.333 29.31 14.87 37.87 2.74
6100 6494 8.911918 TTTTGGTTATGAGTACATTGTACTGT 57.088 30.769 29.31 20.26 37.87 3.55
6101 6495 8.911918 TTTGGTTATGAGTACATTGTACTGTT 57.088 30.769 29.31 19.19 37.87 3.16
6102 6496 8.542497 TTGGTTATGAGTACATTGTACTGTTC 57.458 34.615 29.31 17.64 37.87 3.18
6103 6497 7.101054 TGGTTATGAGTACATTGTACTGTTCC 58.899 38.462 29.31 21.90 37.87 3.62
6114 6508 8.034313 ACATTGTACTGTTCCCTGATACATAT 57.966 34.615 0.00 0.00 0.00 1.78
6140 6534 2.715749 CAGACCCTGCACCATGATTA 57.284 50.000 0.00 0.00 0.00 1.75
6204 6681 3.295093 TGTCAGAGTGGGCATTGAAAAA 58.705 40.909 0.00 0.00 0.00 1.94
6292 6769 3.375782 AACCTGTTCATCTGCAAAAGC 57.624 42.857 0.00 0.00 0.00 3.51
6300 6777 7.221452 CCTGTTCATCTGCAAAAGCATAATAAC 59.779 37.037 0.00 0.00 0.00 1.89
6322 6799 5.812286 ACCGGAAAATAACTTGTCCTGTAT 58.188 37.500 9.46 0.00 0.00 2.29
6405 6882 3.867857 TGCCTGAATCGTATGCAAGTTA 58.132 40.909 0.00 0.00 0.00 2.24
6421 6898 2.572290 AGTTAAGCTCTTTTGTGCGGT 58.428 42.857 0.00 0.00 43.05 5.68
6424 6901 1.680338 AAGCTCTTTTGTGCGGTCTT 58.320 45.000 0.00 0.00 43.05 3.01
6433 6910 0.535335 TGTGCGGTCTTACCATCCTC 59.465 55.000 0.00 0.00 38.47 3.71
6505 6989 3.644976 AACGCGCGTGCATGAACA 61.645 55.556 38.44 0.00 42.97 3.18
6554 7038 2.914777 GATGGCGAGTCCCAGCTGAC 62.915 65.000 17.39 6.33 38.24 3.51
6579 7063 1.794116 CCTGCAAACAAAAATCTGGCG 59.206 47.619 0.00 0.00 0.00 5.69
6592 7076 4.864704 AATCTGGCGTTTTATTTGGTGT 57.135 36.364 0.00 0.00 0.00 4.16
6593 7077 3.634568 TCTGGCGTTTTATTTGGTGTG 57.365 42.857 0.00 0.00 0.00 3.82
6612 7096 4.210120 GTGTGAGTCTCAACTTGCTGTAAG 59.790 45.833 3.51 3.84 42.30 2.34
6617 7101 6.258727 TGAGTCTCAACTTGCTGTAAGAAAAG 59.741 38.462 12.54 6.09 39.76 2.27
6618 7102 5.529060 AGTCTCAACTTGCTGTAAGAAAAGG 59.471 40.000 12.54 0.00 39.76 3.11
6627 7111 7.502561 ACTTGCTGTAAGAAAAGGTTATGTTCT 59.497 33.333 12.54 0.00 39.76 3.01
6628 7112 7.202016 TGCTGTAAGAAAAGGTTATGTTCTG 57.798 36.000 0.00 0.00 34.07 3.02
6632 7116 8.514330 TGTAAGAAAAGGTTATGTTCTGTGTT 57.486 30.769 0.00 0.00 32.03 3.32
6638 7122 4.151883 AGGTTATGTTCTGTGTTGCCATT 58.848 39.130 0.00 0.00 0.00 3.16
6644 7128 0.961019 TCTGTGTTGCCATTGCTTCC 59.039 50.000 0.00 0.00 38.71 3.46
6656 7140 4.012374 CCATTGCTTCCACTGTCAGTTAT 58.988 43.478 1.67 0.00 0.00 1.89
6704 7197 2.436173 GTCAGTATCTGCTAGGCCCTTT 59.564 50.000 0.00 0.00 0.00 3.11
6705 7198 2.700897 TCAGTATCTGCTAGGCCCTTTC 59.299 50.000 0.00 0.00 0.00 2.62
6711 7204 0.912486 TGCTAGGCCCTTTCTTCCTC 59.088 55.000 0.00 0.00 0.00 3.71
6714 7207 2.192263 CTAGGCCCTTTCTTCCTCTGT 58.808 52.381 0.00 0.00 0.00 3.41
6783 7284 3.520187 CAATTTTGCTGACCCTGGC 57.480 52.632 0.00 0.00 0.00 4.85
6784 7285 0.971386 CAATTTTGCTGACCCTGGCT 59.029 50.000 0.00 0.00 0.00 4.75
6785 7286 2.170166 CAATTTTGCTGACCCTGGCTA 58.830 47.619 0.00 0.00 0.00 3.93
6786 7287 2.134789 ATTTTGCTGACCCTGGCTAG 57.865 50.000 0.00 0.00 0.00 3.42
6787 7288 0.038166 TTTTGCTGACCCTGGCTAGG 59.962 55.000 9.64 9.64 44.18 3.02
6788 7289 1.133809 TTTGCTGACCCTGGCTAGGT 61.134 55.000 15.86 3.81 42.96 3.08
6793 7294 4.796408 ACCCTGGCTAGGTCTCAG 57.204 61.111 15.86 1.35 42.96 3.35
6794 7295 1.784387 ACCCTGGCTAGGTCTCAGT 59.216 57.895 15.86 2.05 42.96 3.41
6795 7296 0.324830 ACCCTGGCTAGGTCTCAGTC 60.325 60.000 15.86 0.00 42.96 3.51
6796 7297 1.388065 CCCTGGCTAGGTCTCAGTCG 61.388 65.000 15.86 0.00 42.96 4.18
6797 7298 0.394488 CCTGGCTAGGTCTCAGTCGA 60.394 60.000 8.21 0.00 39.39 4.20
6798 7299 0.736053 CTGGCTAGGTCTCAGTCGAC 59.264 60.000 7.70 7.70 0.00 4.20
6799 7300 0.328592 TGGCTAGGTCTCAGTCGACT 59.671 55.000 13.58 13.58 34.38 4.18
6800 7301 0.736053 GGCTAGGTCTCAGTCGACTG 59.264 60.000 34.76 34.76 45.08 3.51
6811 7312 3.741805 CAGTCGACTGAGACATAACGA 57.258 47.619 36.73 0.00 46.59 3.85
6812 7313 4.079665 CAGTCGACTGAGACATAACGAA 57.920 45.455 36.73 0.00 46.59 3.85
6813 7314 4.473199 CAGTCGACTGAGACATAACGAAA 58.527 43.478 36.73 0.00 46.59 3.46
6814 7315 5.096169 CAGTCGACTGAGACATAACGAAAT 58.904 41.667 36.73 0.00 46.59 2.17
6815 7316 5.228220 CAGTCGACTGAGACATAACGAAATC 59.772 44.000 36.73 0.00 46.59 2.17
6816 7317 5.093457 GTCGACTGAGACATAACGAAATCA 58.907 41.667 8.70 0.00 40.65 2.57
6817 7318 5.571741 GTCGACTGAGACATAACGAAATCAA 59.428 40.000 8.70 0.00 40.65 2.57
6818 7319 5.800438 TCGACTGAGACATAACGAAATCAAG 59.200 40.000 0.00 0.00 0.00 3.02
6819 7320 5.573282 CGACTGAGACATAACGAAATCAAGT 59.427 40.000 0.00 0.00 0.00 3.16
6820 7321 6.089551 CGACTGAGACATAACGAAATCAAGTT 59.910 38.462 0.00 0.00 0.00 2.66
6821 7322 7.121974 ACTGAGACATAACGAAATCAAGTTG 57.878 36.000 0.00 0.00 0.00 3.16
6822 7323 6.929049 ACTGAGACATAACGAAATCAAGTTGA 59.071 34.615 8.27 8.27 0.00 3.18
6823 7324 7.604164 ACTGAGACATAACGAAATCAAGTTGAT 59.396 33.333 12.75 12.75 39.09 2.57
6824 7325 8.996024 TGAGACATAACGAAATCAAGTTGATA 57.004 30.769 18.56 2.57 35.76 2.15
6825 7326 9.599866 TGAGACATAACGAAATCAAGTTGATAT 57.400 29.630 18.56 4.89 35.76 1.63
6876 7377 2.261037 TTTTTGCGCGAATCTCCATG 57.739 45.000 12.10 0.00 0.00 3.66
6877 7378 0.179166 TTTTGCGCGAATCTCCATGC 60.179 50.000 12.10 0.00 0.00 4.06
6878 7379 1.304509 TTTGCGCGAATCTCCATGCA 61.305 50.000 12.10 0.00 0.00 3.96
6879 7380 1.304509 TTGCGCGAATCTCCATGCAA 61.305 50.000 12.10 0.00 39.73 4.08
6880 7381 1.304509 TGCGCGAATCTCCATGCAAA 61.305 50.000 12.10 0.00 0.00 3.68
6881 7382 0.179166 GCGCGAATCTCCATGCAAAA 60.179 50.000 12.10 0.00 0.00 2.44
6882 7383 1.534595 GCGCGAATCTCCATGCAAAAT 60.535 47.619 12.10 0.00 0.00 1.82
6883 7384 2.114056 CGCGAATCTCCATGCAAAATG 58.886 47.619 0.00 0.00 0.00 2.32
6884 7385 2.223317 CGCGAATCTCCATGCAAAATGA 60.223 45.455 0.00 0.00 0.00 2.57
6885 7386 3.731565 CGCGAATCTCCATGCAAAATGAA 60.732 43.478 0.00 0.00 0.00 2.57
6886 7387 4.175516 GCGAATCTCCATGCAAAATGAAA 58.824 39.130 0.00 0.00 0.00 2.69
6887 7388 4.266976 GCGAATCTCCATGCAAAATGAAAG 59.733 41.667 0.00 0.00 0.00 2.62
6888 7389 4.802039 CGAATCTCCATGCAAAATGAAAGG 59.198 41.667 0.00 0.00 0.00 3.11
6889 7390 5.393352 CGAATCTCCATGCAAAATGAAAGGA 60.393 40.000 0.00 0.00 0.00 3.36
6890 7391 6.363167 AATCTCCATGCAAAATGAAAGGAA 57.637 33.333 0.00 0.00 0.00 3.36
6891 7392 5.395682 TCTCCATGCAAAATGAAAGGAAG 57.604 39.130 0.00 0.00 0.00 3.46
6892 7393 5.078949 TCTCCATGCAAAATGAAAGGAAGA 58.921 37.500 0.00 0.00 0.00 2.87
6893 7394 5.718130 TCTCCATGCAAAATGAAAGGAAGAT 59.282 36.000 0.00 0.00 0.00 2.40
6894 7395 6.891361 TCTCCATGCAAAATGAAAGGAAGATA 59.109 34.615 0.00 0.00 0.00 1.98
6895 7396 7.067859 TCTCCATGCAAAATGAAAGGAAGATAG 59.932 37.037 0.00 0.00 0.00 2.08
6896 7397 6.664816 TCCATGCAAAATGAAAGGAAGATAGT 59.335 34.615 0.00 0.00 0.00 2.12
6897 7398 7.833682 TCCATGCAAAATGAAAGGAAGATAGTA 59.166 33.333 0.00 0.00 0.00 1.82
6898 7399 8.636213 CCATGCAAAATGAAAGGAAGATAGTAT 58.364 33.333 0.00 0.00 0.00 2.12
6899 7400 9.459640 CATGCAAAATGAAAGGAAGATAGTATG 57.540 33.333 0.00 0.00 0.00 2.39
6900 7401 7.999679 TGCAAAATGAAAGGAAGATAGTATGG 58.000 34.615 0.00 0.00 0.00 2.74
6901 7402 7.833682 TGCAAAATGAAAGGAAGATAGTATGGA 59.166 33.333 0.00 0.00 0.00 3.41
6902 7403 8.131731 GCAAAATGAAAGGAAGATAGTATGGAC 58.868 37.037 0.00 0.00 0.00 4.02
6903 7404 9.401058 CAAAATGAAAGGAAGATAGTATGGACT 57.599 33.333 0.00 0.00 39.92 3.85
6904 7405 8.970859 AAATGAAAGGAAGATAGTATGGACTG 57.029 34.615 0.00 0.00 36.28 3.51
6905 7406 7.921041 ATGAAAGGAAGATAGTATGGACTGA 57.079 36.000 0.00 0.00 36.28 3.41
6906 7407 7.353414 TGAAAGGAAGATAGTATGGACTGAG 57.647 40.000 0.00 0.00 36.28 3.35
6907 7408 7.126061 TGAAAGGAAGATAGTATGGACTGAGA 58.874 38.462 0.00 0.00 36.28 3.27
6908 7409 6.969993 AAGGAAGATAGTATGGACTGAGAC 57.030 41.667 0.00 0.00 36.28 3.36
6909 7410 6.274322 AGGAAGATAGTATGGACTGAGACT 57.726 41.667 0.00 0.00 36.28 3.24
6910 7411 6.678547 AGGAAGATAGTATGGACTGAGACTT 58.321 40.000 0.00 0.00 36.28 3.01
6911 7412 7.817440 AGGAAGATAGTATGGACTGAGACTTA 58.183 38.462 0.00 0.00 36.28 2.24
6912 7413 7.942341 AGGAAGATAGTATGGACTGAGACTTAG 59.058 40.741 0.00 0.00 36.28 2.18
6913 7414 7.308951 GGAAGATAGTATGGACTGAGACTTAGC 60.309 44.444 0.00 0.00 36.28 3.09
6914 7415 6.606069 AGATAGTATGGACTGAGACTTAGCA 58.394 40.000 0.00 0.00 36.28 3.49
6915 7416 6.714810 AGATAGTATGGACTGAGACTTAGCAG 59.285 42.308 0.00 0.00 36.28 4.24
6916 7417 4.861196 AGTATGGACTGAGACTTAGCAGA 58.139 43.478 0.00 0.00 33.41 4.26
6917 7418 4.887071 AGTATGGACTGAGACTTAGCAGAG 59.113 45.833 0.00 0.00 33.41 3.35
6918 7419 3.162147 TGGACTGAGACTTAGCAGAGT 57.838 47.619 0.00 0.00 36.07 3.24
6919 7420 4.302559 TGGACTGAGACTTAGCAGAGTA 57.697 45.455 0.00 0.00 36.07 2.59
6920 7421 4.663334 TGGACTGAGACTTAGCAGAGTAA 58.337 43.478 0.00 0.00 36.07 2.24
6921 7422 5.077564 TGGACTGAGACTTAGCAGAGTAAA 58.922 41.667 0.00 0.00 36.07 2.01
6922 7423 5.538813 TGGACTGAGACTTAGCAGAGTAAAA 59.461 40.000 0.00 0.00 36.07 1.52
6923 7424 6.211584 TGGACTGAGACTTAGCAGAGTAAAAT 59.788 38.462 0.00 0.00 36.07 1.82
6924 7425 7.396339 TGGACTGAGACTTAGCAGAGTAAAATA 59.604 37.037 0.00 0.00 36.07 1.40
6925 7426 8.251721 GGACTGAGACTTAGCAGAGTAAAATAA 58.748 37.037 0.00 0.00 36.07 1.40
6926 7427 8.989653 ACTGAGACTTAGCAGAGTAAAATAAC 57.010 34.615 0.00 0.00 36.07 1.89
6927 7428 8.808092 ACTGAGACTTAGCAGAGTAAAATAACT 58.192 33.333 0.00 0.00 36.07 2.24
6928 7429 9.646427 CTGAGACTTAGCAGAGTAAAATAACTT 57.354 33.333 0.00 0.00 34.06 2.66
6950 7451 8.067780 ACTTAACAAAATTGAATTGTAACGCC 57.932 30.769 0.00 0.00 39.98 5.68
6951 7452 7.707035 ACTTAACAAAATTGAATTGTAACGCCA 59.293 29.630 0.00 0.00 39.98 5.69
6952 7453 6.910536 AACAAAATTGAATTGTAACGCCAA 57.089 29.167 0.00 0.00 39.98 4.52
6953 7454 7.489574 AACAAAATTGAATTGTAACGCCAAT 57.510 28.000 0.00 0.00 39.98 3.16
6954 7455 7.489574 ACAAAATTGAATTGTAACGCCAATT 57.510 28.000 7.71 7.71 45.29 2.32
6955 7456 7.924940 ACAAAATTGAATTGTAACGCCAATTT 58.075 26.923 0.00 0.00 43.28 1.82
6956 7457 7.854916 ACAAAATTGAATTGTAACGCCAATTTG 59.145 29.630 0.00 0.00 43.28 2.32
6957 7458 6.479095 AATTGAATTGTAACGCCAATTTGG 57.521 33.333 11.27 11.27 43.28 3.28
6958 7459 3.919216 TGAATTGTAACGCCAATTTGGG 58.081 40.909 17.03 9.51 43.28 4.12
6959 7460 3.574396 TGAATTGTAACGCCAATTTGGGA 59.426 39.130 17.03 0.00 43.28 4.37
6960 7461 3.866883 ATTGTAACGCCAATTTGGGAG 57.133 42.857 17.03 2.83 38.19 4.30
6961 7462 1.540267 TGTAACGCCAATTTGGGAGG 58.460 50.000 17.03 0.00 38.19 4.30
6962 7463 0.172578 GTAACGCCAATTTGGGAGGC 59.827 55.000 17.03 1.58 44.89 4.70
6963 7464 0.039035 TAACGCCAATTTGGGAGGCT 59.961 50.000 17.03 0.00 46.14 4.58
6979 7481 1.078656 AGGCTGAAATTTTGGGGGCTA 59.921 47.619 0.00 0.00 0.00 3.93
6981 7483 1.135112 GCTGAAATTTTGGGGGCTACG 60.135 52.381 0.00 0.00 0.00 3.51
6990 7492 1.747745 GGGGGCTACGTTTTGCGAT 60.748 57.895 0.00 0.00 44.77 4.58
7010 7512 0.822811 GATGCACTCTCTCAGCTGGA 59.177 55.000 15.13 9.24 0.00 3.86
7012 7514 1.217779 GCACTCTCTCAGCTGGACC 59.782 63.158 15.13 0.00 0.00 4.46
7016 7518 1.305633 TCTCTCAGCTGGACCAGGG 60.306 63.158 23.09 3.49 31.21 4.45
7024 7526 4.263572 TGGACCAGGGTTGCACGG 62.264 66.667 0.00 0.00 0.00 4.94
7046 10155 5.189180 GGATGTATGCCATTCTATTCCCTC 58.811 45.833 0.00 0.00 32.56 4.30
7048 10157 5.233083 TGTATGCCATTCTATTCCCTCTG 57.767 43.478 0.00 0.00 0.00 3.35
7050 10159 2.775418 TGCCATTCTATTCCCTCTGGA 58.225 47.619 0.00 0.00 39.54 3.86
7092 10201 2.093106 ACCAGATCGTCACTGAGGTAC 58.907 52.381 0.00 0.00 37.54 3.34
7093 10202 1.064208 CCAGATCGTCACTGAGGTACG 59.936 57.143 2.92 2.92 37.54 3.67
7094 10203 1.738350 CAGATCGTCACTGAGGTACGT 59.262 52.381 8.35 0.00 37.54 3.57
7095 10204 2.934553 CAGATCGTCACTGAGGTACGTA 59.065 50.000 8.35 0.00 37.54 3.57
7203 10328 2.157834 TACCCACAACACAAGTAGCG 57.842 50.000 0.00 0.00 0.00 4.26
7204 10329 1.164041 ACCCACAACACAAGTAGCGC 61.164 55.000 0.00 0.00 0.00 5.92
7239 10364 0.459237 CGTGCACTCATCCCTCTGAC 60.459 60.000 16.19 0.00 0.00 3.51
7240 10365 0.459237 GTGCACTCATCCCTCTGACG 60.459 60.000 10.32 0.00 0.00 4.35
7241 10366 0.611896 TGCACTCATCCCTCTGACGA 60.612 55.000 0.00 0.00 0.00 4.20
7303 10429 2.434185 GGATTCGGCACACGCAGA 60.434 61.111 0.00 0.00 43.86 4.26
7306 10432 2.108157 TTCGGCACACGCAGAAGT 59.892 55.556 0.00 0.00 45.64 3.01
7307 10433 1.364536 TTCGGCACACGCAGAAGTA 59.635 52.632 0.00 0.00 45.64 2.24
7308 10434 0.666274 TTCGGCACACGCAGAAGTAG 60.666 55.000 0.00 0.00 45.64 2.57
7309 10435 1.080772 CGGCACACGCAGAAGTAGA 60.081 57.895 0.00 0.00 41.24 2.59
7310 10436 1.073216 CGGCACACGCAGAAGTAGAG 61.073 60.000 0.00 0.00 41.24 2.43
7311 10437 0.737715 GGCACACGCAGAAGTAGAGG 60.738 60.000 0.00 0.00 41.24 3.69
7312 10438 0.243907 GCACACGCAGAAGTAGAGGA 59.756 55.000 0.00 0.00 38.36 3.71
7313 10439 1.734047 GCACACGCAGAAGTAGAGGAG 60.734 57.143 0.00 0.00 38.36 3.69
7314 10440 1.135257 CACACGCAGAAGTAGAGGAGG 60.135 57.143 0.00 0.00 0.00 4.30
7315 10441 0.179124 CACGCAGAAGTAGAGGAGGC 60.179 60.000 0.00 0.00 0.00 4.70
7316 10442 0.612174 ACGCAGAAGTAGAGGAGGCA 60.612 55.000 0.00 0.00 0.00 4.75
7372 10498 2.359169 GCTCCGGTGTCATCCCTGA 61.359 63.158 0.00 0.00 0.00 3.86
7396 10522 3.207265 AGTAATGCTGACACCACACAA 57.793 42.857 0.00 0.00 0.00 3.33
7515 10641 3.814005 ATAACGATAACAGCGGAAGGT 57.186 42.857 0.00 0.00 46.81 3.50
7646 10775 1.811965 CGAAAATGGGTCAGCACATGA 59.188 47.619 0.00 0.00 37.86 3.07
7691 10820 9.087424 CACATAGAGAGTAATGAAATGAAACGA 57.913 33.333 0.00 0.00 0.00 3.85
7722 10852 1.824230 TGCATATTTGGCTGGTGGAAC 59.176 47.619 0.00 0.00 0.00 3.62
7818 10948 8.175925 TGGTGATTGTTAAACATTGAGAATGA 57.824 30.769 3.35 0.00 41.46 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 5.049680 TGTTCCTACTTCAGTTTCGAAATGC 60.050 40.000 14.69 1.86 0.00 3.56
26 27 9.436957 TGATTCTAATGTTCCTACTTCAGTTTC 57.563 33.333 0.00 0.00 0.00 2.78
123 124 4.702612 TGTTTTGTGTCACACTACCAACAT 59.297 37.500 9.90 0.00 35.11 2.71
135 136 7.598278 ACAATTTGTCTACTTGTTTTGTGTCA 58.402 30.769 0.00 0.00 29.06 3.58
144 145 8.635765 ACATGGAATACAATTTGTCTACTTGT 57.364 30.769 5.07 7.26 37.00 3.16
152 153 9.787532 CGATCTTTTACATGGAATACAATTTGT 57.212 29.630 7.30 7.30 0.00 2.83
193 194 4.451900 AGAAAGAACGTGTCATTTCCAGT 58.548 39.130 0.00 0.00 33.16 4.00
207 208 6.092670 TGAGCACTGCATTGTATAGAAAGAAC 59.907 38.462 5.89 0.00 0.00 3.01
232 233 7.660617 GTGATCTCTTCCATCATATGTGACAAT 59.339 37.037 1.90 0.00 37.14 2.71
236 237 6.098695 TGTGTGATCTCTTCCATCATATGTGA 59.901 38.462 1.90 0.00 39.04 3.58
264 270 9.128404 ACCGTAGACATGAGTGAATAGTATTTA 57.872 33.333 0.00 0.00 0.00 1.40
351 357 9.671279 TGATTGATTCACTACATCTATGTTTGT 57.329 29.630 0.12 0.00 41.97 2.83
382 388 5.483685 ACATGTCCTAGTAAGCTCACAAA 57.516 39.130 0.00 0.00 0.00 2.83
428 434 6.884295 TCTTGATTCAGATTTTGGACGGTATT 59.116 34.615 0.00 0.00 0.00 1.89
430 436 5.800296 TCTTGATTCAGATTTTGGACGGTA 58.200 37.500 0.00 0.00 0.00 4.02
440 447 8.378565 TGGTAGAGAAACTTCTTGATTCAGATT 58.621 33.333 0.00 0.00 37.73 2.40
464 471 9.475505 CGTTGATTAATTGCAAACAATAAATGG 57.524 29.630 1.71 0.00 45.90 3.16
467 474 9.249457 TCACGTTGATTAATTGCAAACAATAAA 57.751 25.926 1.71 2.70 45.90 1.40
539 546 5.047377 ACAATTGCGGAACAGGTTTATTGAT 60.047 36.000 5.05 0.00 0.00 2.57
552 559 3.013921 GACCCAGATTACAATTGCGGAA 58.986 45.455 5.05 0.00 0.00 4.30
553 560 2.026729 TGACCCAGATTACAATTGCGGA 60.027 45.455 5.05 0.00 0.00 5.54
555 562 4.142403 ACATTGACCCAGATTACAATTGCG 60.142 41.667 5.05 0.00 31.85 4.85
561 568 4.908601 AGTGACATTGACCCAGATTACA 57.091 40.909 0.00 0.00 0.00 2.41
602 609 4.896482 CAGCCCTAGGAATAGACACTAGTT 59.104 45.833 11.48 0.00 33.93 2.24
624 631 4.714308 AGTTCACAGGGTTTCAAAATTCCA 59.286 37.500 0.00 0.00 0.00 3.53
676 683 3.412386 ACCTGCACTTAATGGTTCAGAC 58.588 45.455 0.00 0.00 33.52 3.51
693 700 0.033920 TGTGTGCTGAGTGCTACCTG 59.966 55.000 0.00 0.00 43.37 4.00
718 725 4.645136 AGTCGTCATGCTAAGACATTAGGA 59.355 41.667 10.60 0.00 42.66 2.94
726 733 2.490509 TCGGAAAGTCGTCATGCTAAGA 59.509 45.455 0.00 0.00 0.00 2.10
727 734 2.599082 GTCGGAAAGTCGTCATGCTAAG 59.401 50.000 0.00 0.00 0.00 2.18
728 735 2.230508 AGTCGGAAAGTCGTCATGCTAA 59.769 45.455 0.00 0.00 0.00 3.09
729 736 1.816835 AGTCGGAAAGTCGTCATGCTA 59.183 47.619 0.00 0.00 0.00 3.49
730 737 0.603569 AGTCGGAAAGTCGTCATGCT 59.396 50.000 0.00 0.00 0.00 3.79
731 738 0.716108 CAGTCGGAAAGTCGTCATGC 59.284 55.000 0.00 0.00 0.00 4.06
732 739 1.986378 GACAGTCGGAAAGTCGTCATG 59.014 52.381 0.00 0.00 0.00 3.07
733 740 1.887198 AGACAGTCGGAAAGTCGTCAT 59.113 47.619 0.00 0.00 37.36 3.06
734 741 1.315690 AGACAGTCGGAAAGTCGTCA 58.684 50.000 0.00 0.00 37.36 4.35
735 742 3.761311 ATAGACAGTCGGAAAGTCGTC 57.239 47.619 0.00 0.00 37.36 4.20
736 743 5.831702 ATAATAGACAGTCGGAAAGTCGT 57.168 39.130 0.00 0.00 37.36 4.34
737 744 7.191551 TGTTATAATAGACAGTCGGAAAGTCG 58.808 38.462 0.00 0.00 37.36 4.18
738 745 8.922058 TTGTTATAATAGACAGTCGGAAAGTC 57.078 34.615 0.00 3.60 0.00 3.01
739 746 8.529476 ACTTGTTATAATAGACAGTCGGAAAGT 58.471 33.333 0.00 0.00 0.00 2.66
740 747 8.928270 ACTTGTTATAATAGACAGTCGGAAAG 57.072 34.615 0.00 0.00 0.00 2.62
741 748 9.146984 CAACTTGTTATAATAGACAGTCGGAAA 57.853 33.333 0.00 0.00 0.00 3.13
742 749 8.308931 ACAACTTGTTATAATAGACAGTCGGAA 58.691 33.333 0.00 0.00 0.00 4.30
743 750 7.758076 CACAACTTGTTATAATAGACAGTCGGA 59.242 37.037 0.00 0.00 0.00 4.55
744 751 7.464178 GCACAACTTGTTATAATAGACAGTCGG 60.464 40.741 0.00 0.00 0.00 4.79
745 752 7.391786 GCACAACTTGTTATAATAGACAGTCG 58.608 38.462 0.00 0.00 0.00 4.18
746 753 7.201617 GGGCACAACTTGTTATAATAGACAGTC 60.202 40.741 0.00 0.00 0.00 3.51
747 754 6.598064 GGGCACAACTTGTTATAATAGACAGT 59.402 38.462 0.00 0.00 0.00 3.55
748 755 6.823689 AGGGCACAACTTGTTATAATAGACAG 59.176 38.462 0.00 0.00 0.00 3.51
749 756 6.597672 CAGGGCACAACTTGTTATAATAGACA 59.402 38.462 0.00 0.00 0.00 3.41
750 757 6.458342 GCAGGGCACAACTTGTTATAATAGAC 60.458 42.308 0.00 0.00 0.00 2.59
751 758 5.588648 GCAGGGCACAACTTGTTATAATAGA 59.411 40.000 0.00 0.00 0.00 1.98
752 759 5.590259 AGCAGGGCACAACTTGTTATAATAG 59.410 40.000 0.00 0.00 0.00 1.73
753 760 5.505780 AGCAGGGCACAACTTGTTATAATA 58.494 37.500 0.00 0.00 0.00 0.98
754 761 4.344104 AGCAGGGCACAACTTGTTATAAT 58.656 39.130 0.00 0.00 0.00 1.28
755 762 3.761897 AGCAGGGCACAACTTGTTATAA 58.238 40.909 0.00 0.00 0.00 0.98
756 763 3.433306 AGCAGGGCACAACTTGTTATA 57.567 42.857 0.00 0.00 0.00 0.98
757 764 2.292828 AGCAGGGCACAACTTGTTAT 57.707 45.000 0.00 0.00 0.00 1.89
758 765 1.953686 GAAGCAGGGCACAACTTGTTA 59.046 47.619 0.00 0.00 0.00 2.41
759 766 0.746659 GAAGCAGGGCACAACTTGTT 59.253 50.000 0.00 0.00 0.00 2.83
760 767 1.447317 CGAAGCAGGGCACAACTTGT 61.447 55.000 0.00 0.00 0.00 3.16
761 768 1.165907 TCGAAGCAGGGCACAACTTG 61.166 55.000 0.00 0.00 0.00 3.16
762 769 0.465460 TTCGAAGCAGGGCACAACTT 60.465 50.000 0.00 0.00 0.00 2.66
763 770 0.886490 CTTCGAAGCAGGGCACAACT 60.886 55.000 13.09 0.00 0.00 3.16
764 771 0.884704 TCTTCGAAGCAGGGCACAAC 60.885 55.000 20.56 0.00 0.00 3.32
765 772 0.603707 CTCTTCGAAGCAGGGCACAA 60.604 55.000 20.56 0.00 0.00 3.33
766 773 1.004560 CTCTTCGAAGCAGGGCACA 60.005 57.895 20.56 0.00 0.00 4.57
767 774 1.004440 ACTCTTCGAAGCAGGGCAC 60.004 57.895 20.56 0.00 0.00 5.01
768 775 1.004560 CACTCTTCGAAGCAGGGCA 60.005 57.895 20.56 0.89 0.00 5.36
769 776 0.739112 CTCACTCTTCGAAGCAGGGC 60.739 60.000 20.56 0.00 0.00 5.19
770 777 0.891373 TCTCACTCTTCGAAGCAGGG 59.109 55.000 20.56 18.00 0.00 4.45
771 778 1.135141 CCTCTCACTCTTCGAAGCAGG 60.135 57.143 20.56 14.22 0.00 4.85
772 779 1.735369 GCCTCTCACTCTTCGAAGCAG 60.735 57.143 20.56 18.77 0.00 4.24
773 780 0.244994 GCCTCTCACTCTTCGAAGCA 59.755 55.000 20.56 8.52 0.00 3.91
774 781 0.800300 CGCCTCTCACTCTTCGAAGC 60.800 60.000 20.56 5.26 0.00 3.86
775 782 0.805614 TCGCCTCTCACTCTTCGAAG 59.194 55.000 19.35 19.35 0.00 3.79
776 783 1.133216 CATCGCCTCTCACTCTTCGAA 59.867 52.381 0.00 0.00 0.00 3.71
777 784 0.735471 CATCGCCTCTCACTCTTCGA 59.265 55.000 0.00 0.00 0.00 3.71
778 785 0.735471 TCATCGCCTCTCACTCTTCG 59.265 55.000 0.00 0.00 0.00 3.79
779 786 1.532921 CGTCATCGCCTCTCACTCTTC 60.533 57.143 0.00 0.00 0.00 2.87
780 787 0.453793 CGTCATCGCCTCTCACTCTT 59.546 55.000 0.00 0.00 0.00 2.85
781 788 1.380403 CCGTCATCGCCTCTCACTCT 61.380 60.000 0.00 0.00 35.54 3.24
782 789 1.064946 CCGTCATCGCCTCTCACTC 59.935 63.158 0.00 0.00 35.54 3.51
783 790 1.679305 ACCGTCATCGCCTCTCACT 60.679 57.895 0.00 0.00 35.54 3.41
784 791 1.517257 CACCGTCATCGCCTCTCAC 60.517 63.158 0.00 0.00 35.54 3.51
785 792 2.710902 CCACCGTCATCGCCTCTCA 61.711 63.158 0.00 0.00 35.54 3.27
786 793 2.105128 CCACCGTCATCGCCTCTC 59.895 66.667 0.00 0.00 35.54 3.20
787 794 4.148825 GCCACCGTCATCGCCTCT 62.149 66.667 0.00 0.00 35.54 3.69
807 814 0.098376 CATTGAAGCGAGCTGAAGGC 59.902 55.000 0.00 0.00 42.19 4.35
808 815 1.446907 ACATTGAAGCGAGCTGAAGG 58.553 50.000 0.00 0.00 0.00 3.46
809 816 3.231965 CAAACATTGAAGCGAGCTGAAG 58.768 45.455 0.00 0.00 0.00 3.02
810 817 2.618241 ACAAACATTGAAGCGAGCTGAA 59.382 40.909 0.00 0.00 0.00 3.02
811 818 2.221169 ACAAACATTGAAGCGAGCTGA 58.779 42.857 0.00 0.00 0.00 4.26
812 819 2.693797 ACAAACATTGAAGCGAGCTG 57.306 45.000 0.00 0.00 0.00 4.24
813 820 3.403038 ACTACAAACATTGAAGCGAGCT 58.597 40.909 0.00 0.00 0.00 4.09
814 821 3.722082 CGACTACAAACATTGAAGCGAGC 60.722 47.826 0.00 0.00 0.00 5.03
815 822 3.428870 ACGACTACAAACATTGAAGCGAG 59.571 43.478 0.00 0.00 0.00 5.03
816 823 3.386486 ACGACTACAAACATTGAAGCGA 58.614 40.909 0.00 0.00 0.00 4.93
817 824 3.788434 ACGACTACAAACATTGAAGCG 57.212 42.857 0.00 0.00 0.00 4.68
818 825 3.664025 GCAACGACTACAAACATTGAAGC 59.336 43.478 0.00 0.00 0.00 3.86
819 826 4.905866 CAGCAACGACTACAAACATTGAAG 59.094 41.667 0.00 0.00 0.00 3.02
820 827 4.260990 CCAGCAACGACTACAAACATTGAA 60.261 41.667 0.00 0.00 0.00 2.69
821 828 3.249799 CCAGCAACGACTACAAACATTGA 59.750 43.478 0.00 0.00 0.00 2.57
822 829 3.249799 TCCAGCAACGACTACAAACATTG 59.750 43.478 0.00 0.00 0.00 2.82
823 830 3.472652 TCCAGCAACGACTACAAACATT 58.527 40.909 0.00 0.00 0.00 2.71
824 831 3.120321 TCCAGCAACGACTACAAACAT 57.880 42.857 0.00 0.00 0.00 2.71
825 832 2.605837 TCCAGCAACGACTACAAACA 57.394 45.000 0.00 0.00 0.00 2.83
826 833 2.159627 CCATCCAGCAACGACTACAAAC 59.840 50.000 0.00 0.00 0.00 2.93
827 834 2.224426 ACCATCCAGCAACGACTACAAA 60.224 45.455 0.00 0.00 0.00 2.83
828 835 1.346395 ACCATCCAGCAACGACTACAA 59.654 47.619 0.00 0.00 0.00 2.41
829 836 0.973632 ACCATCCAGCAACGACTACA 59.026 50.000 0.00 0.00 0.00 2.74
830 837 1.204941 AGACCATCCAGCAACGACTAC 59.795 52.381 0.00 0.00 0.00 2.73
831 838 1.557099 AGACCATCCAGCAACGACTA 58.443 50.000 0.00 0.00 0.00 2.59
832 839 1.557099 TAGACCATCCAGCAACGACT 58.443 50.000 0.00 0.00 0.00 4.18
833 840 2.159099 TCATAGACCATCCAGCAACGAC 60.159 50.000 0.00 0.00 0.00 4.34
834 841 2.107366 TCATAGACCATCCAGCAACGA 58.893 47.619 0.00 0.00 0.00 3.85
835 842 2.602257 TCATAGACCATCCAGCAACG 57.398 50.000 0.00 0.00 0.00 4.10
836 843 4.514441 CAGATTCATAGACCATCCAGCAAC 59.486 45.833 0.00 0.00 0.00 4.17
837 844 4.445305 CCAGATTCATAGACCATCCAGCAA 60.445 45.833 0.00 0.00 0.00 3.91
838 845 3.072038 CCAGATTCATAGACCATCCAGCA 59.928 47.826 0.00 0.00 0.00 4.41
839 846 3.326006 TCCAGATTCATAGACCATCCAGC 59.674 47.826 0.00 0.00 0.00 4.85
840 847 4.560311 CGTCCAGATTCATAGACCATCCAG 60.560 50.000 0.00 0.00 0.00 3.86
841 848 3.321968 CGTCCAGATTCATAGACCATCCA 59.678 47.826 0.00 0.00 0.00 3.41
842 849 3.322254 ACGTCCAGATTCATAGACCATCC 59.678 47.826 0.00 0.00 0.00 3.51
843 850 4.592485 ACGTCCAGATTCATAGACCATC 57.408 45.455 0.00 0.00 0.00 3.51
844 851 6.672266 ATTACGTCCAGATTCATAGACCAT 57.328 37.500 0.00 0.00 0.00 3.55
845 852 6.479972 AATTACGTCCAGATTCATAGACCA 57.520 37.500 0.00 0.00 0.00 4.02
846 853 7.494625 TGAAAATTACGTCCAGATTCATAGACC 59.505 37.037 0.00 0.00 0.00 3.85
847 854 8.420374 TGAAAATTACGTCCAGATTCATAGAC 57.580 34.615 0.00 0.00 0.00 2.59
848 855 9.613428 AATGAAAATTACGTCCAGATTCATAGA 57.387 29.630 13.42 0.00 35.60 1.98
854 861 9.716507 CGAAATAATGAAAATTACGTCCAGATT 57.283 29.630 0.00 0.00 0.00 2.40
855 862 8.342634 CCGAAATAATGAAAATTACGTCCAGAT 58.657 33.333 0.00 0.00 0.00 2.90
856 863 7.201661 CCCGAAATAATGAAAATTACGTCCAGA 60.202 37.037 0.00 0.00 0.00 3.86
857 864 6.910433 CCCGAAATAATGAAAATTACGTCCAG 59.090 38.462 0.00 0.00 0.00 3.86
858 865 6.374894 ACCCGAAATAATGAAAATTACGTCCA 59.625 34.615 0.00 0.00 0.00 4.02
859 866 6.689669 CACCCGAAATAATGAAAATTACGTCC 59.310 38.462 0.00 0.00 0.00 4.79
860 867 7.245604 ACACCCGAAATAATGAAAATTACGTC 58.754 34.615 0.00 0.00 0.00 4.34
861 868 7.148355 ACACCCGAAATAATGAAAATTACGT 57.852 32.000 0.00 0.00 0.00 3.57
862 869 8.455598 AAACACCCGAAATAATGAAAATTACG 57.544 30.769 0.00 0.00 0.00 3.18
866 873 9.936759 ACAATAAACACCCGAAATAATGAAAAT 57.063 25.926 0.00 0.00 0.00 1.82
868 875 9.843334 GTACAATAAACACCCGAAATAATGAAA 57.157 29.630 0.00 0.00 0.00 2.69
869 876 9.233649 AGTACAATAAACACCCGAAATAATGAA 57.766 29.630 0.00 0.00 0.00 2.57
870 877 8.795842 AGTACAATAAACACCCGAAATAATGA 57.204 30.769 0.00 0.00 0.00 2.57
871 878 9.849166 AAAGTACAATAAACACCCGAAATAATG 57.151 29.630 0.00 0.00 0.00 1.90
873 880 9.064706 TGAAAGTACAATAAACACCCGAAATAA 57.935 29.630 0.00 0.00 0.00 1.40
874 881 8.618702 TGAAAGTACAATAAACACCCGAAATA 57.381 30.769 0.00 0.00 0.00 1.40
875 882 7.513371 TGAAAGTACAATAAACACCCGAAAT 57.487 32.000 0.00 0.00 0.00 2.17
876 883 6.939132 TGAAAGTACAATAAACACCCGAAA 57.061 33.333 0.00 0.00 0.00 3.46
877 884 6.711194 TCATGAAAGTACAATAAACACCCGAA 59.289 34.615 0.00 0.00 0.00 4.30
878 885 6.231951 TCATGAAAGTACAATAAACACCCGA 58.768 36.000 0.00 0.00 0.00 5.14
879 886 6.489127 TCATGAAAGTACAATAAACACCCG 57.511 37.500 0.00 0.00 0.00 5.28
880 887 8.519526 TCAATCATGAAAGTACAATAAACACCC 58.480 33.333 0.00 0.00 30.99 4.61
881 888 9.906660 TTCAATCATGAAAGTACAATAAACACC 57.093 29.630 0.00 0.00 42.47 4.16
979 1297 4.720046 TGGGTCTAGTGCATAACAACAAA 58.280 39.130 0.00 0.00 0.00 2.83
1295 1614 4.233635 CTCCGCGTCCCGTACTCG 62.234 72.222 4.92 0.00 36.07 4.18
1481 1800 8.152023 TGGTATTTTTATTGTTGGGCCTAAAT 57.848 30.769 1.74 4.64 0.00 1.40
1487 1806 5.416083 GGACTGGTATTTTTATTGTTGGGC 58.584 41.667 0.00 0.00 0.00 5.36
1555 1874 7.288560 TGGGTAACAGAGGTACAAACAAATTA 58.711 34.615 0.00 0.00 39.74 1.40
1566 1885 5.396485 TCAAGTACTTGGGTAACAGAGGTA 58.604 41.667 30.35 8.03 40.78 3.08
1571 1890 8.095169 AGAATAGTTCAAGTACTTGGGTAACAG 58.905 37.037 30.35 7.30 40.78 3.16
1691 2018 5.643777 GCAGGTTAGCAGAGATTAAAGTTGA 59.356 40.000 0.00 0.00 0.00 3.18
1716 2043 6.362016 CACATCAGACGTGAAGCTAATCTATC 59.638 42.308 0.00 0.00 35.88 2.08
2092 2420 5.914898 AAGTTGCTGTAAACCTGAAAAGT 57.085 34.783 0.00 0.00 0.00 2.66
2195 2523 4.716784 ACATCAATTGTACCCAGCTCTCTA 59.283 41.667 5.13 0.00 36.57 2.43
2670 2999 7.928307 AAGTGACTCATAAAATACACAGCAT 57.072 32.000 0.00 0.00 0.00 3.79
2823 3152 4.487714 TGCAAATTCCCTCCTAGTACAG 57.512 45.455 0.00 0.00 0.00 2.74
2895 3224 7.062255 GCAAAGCTCAGATGTTTTGTAAATACC 59.938 37.037 0.00 0.00 34.04 2.73
2934 3263 6.694411 GCAAGACAGTGATAAATAAGGCAATG 59.306 38.462 0.00 0.00 33.12 2.82
3102 3431 9.256228 TCTTTGAGATGTAAGGACTTACTACAT 57.744 33.333 19.53 10.25 44.21 2.29
3141 3470 0.108662 GCATTGGTTTGGCTAGGTGC 60.109 55.000 0.00 0.00 41.94 5.01
3186 3515 1.821216 CACTACGAAGGTTGGGCATT 58.179 50.000 0.00 0.00 0.00 3.56
3228 3557 6.047231 ACCATCTATTTGTTCGTTACTAGGC 58.953 40.000 0.00 0.00 0.00 3.93
3388 3717 5.163673 GCCAGATTCTCCTAAAGCTTTTCAG 60.164 44.000 18.47 9.52 0.00 3.02
3563 3892 3.221771 ACAGCAGCAACAAAGAATACCA 58.778 40.909 0.00 0.00 0.00 3.25
3897 4226 0.461548 TTGCAACCAATTGACGGCAA 59.538 45.000 5.94 5.94 38.15 4.52
3954 4283 5.003804 ACAAATGTAGTCTTGGTAAGCCTG 58.996 41.667 0.00 0.00 35.27 4.85
4102 4432 4.037923 GCCAAACAATTGAAAGAGAGACCA 59.962 41.667 13.59 0.00 38.94 4.02
4218 4548 3.819368 CATATATCCTTGTGGGTGTGCA 58.181 45.455 0.00 0.00 36.25 4.57
4278 4608 3.181465 ACTGTGTTCGAGACCAAGTCAAT 60.181 43.478 0.00 0.00 34.60 2.57
4296 4626 5.958380 TCCTAGTCTGGTATCAATTGACTGT 59.042 40.000 11.07 0.00 38.30 3.55
4307 4637 2.706190 GGTGCCAATCCTAGTCTGGTAT 59.294 50.000 4.46 0.00 32.46 2.73
4457 4803 0.954452 GAACAGACCCTGCAACCAAG 59.046 55.000 0.00 0.00 34.37 3.61
4479 4869 3.703921 TGAAATAAAACCCCACCCTAGC 58.296 45.455 0.00 0.00 0.00 3.42
4544 4934 3.907474 TCACTGTCTATTTGTCTTCCCCA 59.093 43.478 0.00 0.00 0.00 4.96
4565 4955 9.785982 AGCCTCCATTTAGAAGTTTATAGATTC 57.214 33.333 0.00 0.00 0.00 2.52
4621 5013 1.180456 CCTGCCATTGTGGAGTGCAA 61.180 55.000 0.00 0.00 40.96 4.08
4691 5083 3.214328 GCCATGGGACTTATTGTGTAGG 58.786 50.000 15.13 0.00 0.00 3.18
4948 5342 2.746362 GAGAAAACAGACCATGCTGAGG 59.254 50.000 7.27 0.00 39.20 3.86
4976 5370 2.749621 GCAATCTCGGTTCAGGACAAAT 59.250 45.455 0.00 0.00 0.00 2.32
5048 5442 6.645306 AGTTTCAACTAGCCCTAGATTCTTC 58.355 40.000 9.20 0.00 37.52 2.87
5181 5575 7.130681 TGAAAACCACTTAACATTCCCAAAT 57.869 32.000 0.00 0.00 0.00 2.32
5343 5737 3.264193 AGGTCATGCTTGTCCATAAGTCA 59.736 43.478 16.17 0.00 33.94 3.41
5393 5787 2.479837 CAGCAACGGTTCTTGTACTGA 58.520 47.619 0.00 0.00 0.00 3.41
5406 5800 4.621991 AGCAATATCTAGTACCAGCAACG 58.378 43.478 0.00 0.00 0.00 4.10
5478 5872 6.176183 AGCACAAGTTAATGATCTTAGCTGT 58.824 36.000 0.00 0.00 34.97 4.40
5586 5980 6.626623 GCGTACTACTTCTTCCATTCTACCAA 60.627 42.308 0.00 0.00 0.00 3.67
5782 6176 2.430465 GTCCTCTCATTTGCAAGCTCA 58.570 47.619 0.00 0.00 0.00 4.26
5849 6243 3.380004 AGTTCCTGATTCTGACGCTCTAG 59.620 47.826 0.00 0.00 0.00 2.43
5920 6314 1.606668 GCCATGACCTCTAGACTCTCG 59.393 57.143 0.00 0.00 0.00 4.04
5974 6368 1.799181 GCTTGATGCTTGCTGCTCATG 60.799 52.381 0.00 0.00 43.37 3.07
5989 6383 3.751479 TTAGCTTCAGTGACAGCTTGA 57.249 42.857 24.92 15.99 44.28 3.02
6013 6407 4.570369 GCTTCCTTCTCAGCTTCAAGATAC 59.430 45.833 0.00 0.00 32.87 2.24
6067 6461 9.582648 AATGTACTCATAACCAAAAGTAAAGGT 57.417 29.630 0.00 0.00 33.11 3.50
6090 6484 8.150296 TGATATGTATCAGGGAACAGTACAATG 58.850 37.037 0.00 0.00 37.76 2.82
6093 6487 6.041637 GGTGATATGTATCAGGGAACAGTACA 59.958 42.308 3.05 0.00 42.84 2.90
6096 6490 5.070981 CAGGTGATATGTATCAGGGAACAGT 59.929 44.000 3.05 0.00 42.84 3.55
6097 6491 5.545588 CAGGTGATATGTATCAGGGAACAG 58.454 45.833 3.05 0.00 42.84 3.16
6098 6492 4.202357 GCAGGTGATATGTATCAGGGAACA 60.202 45.833 3.05 0.00 42.84 3.18
6099 6493 4.202357 TGCAGGTGATATGTATCAGGGAAC 60.202 45.833 3.05 0.00 42.84 3.62
6100 6494 3.973305 TGCAGGTGATATGTATCAGGGAA 59.027 43.478 3.05 0.00 42.84 3.97
6101 6495 3.580022 CTGCAGGTGATATGTATCAGGGA 59.420 47.826 5.57 0.00 42.84 4.20
6102 6496 3.580022 TCTGCAGGTGATATGTATCAGGG 59.420 47.826 15.13 0.00 42.84 4.45
6103 6497 4.562347 GGTCTGCAGGTGATATGTATCAGG 60.562 50.000 15.13 0.00 42.84 3.86
6204 6681 3.526931 ACTAGAGCATGTGCACGTAAT 57.473 42.857 12.10 2.79 45.16 1.89
6292 6769 8.899771 AGGACAAGTTATTTTCCGGTTATTATG 58.100 33.333 0.00 0.00 32.97 1.90
6300 6777 6.373216 TCAATACAGGACAAGTTATTTTCCGG 59.627 38.462 0.00 0.00 32.97 5.14
6353 6830 2.086869 ACCGCTCCTTTGACATCAATG 58.913 47.619 0.00 0.00 35.55 2.82
6370 6847 1.137675 TCAGGCAGATGATCTTGACCG 59.862 52.381 0.00 0.00 0.00 4.79
6405 6882 1.680338 AAGACCGCACAAAAGAGCTT 58.320 45.000 0.00 0.00 0.00 3.74
6421 6898 9.301897 CATATATGGATATCGAGGATGGTAAGA 57.698 37.037 4.68 0.00 0.00 2.10
6424 6901 9.247861 CATCATATATGGATATCGAGGATGGTA 57.752 37.037 12.78 0.00 29.34 3.25
6489 6973 3.422303 ATGTTCATGCACGCGCGT 61.422 55.556 32.73 32.73 42.97 6.01
6505 6989 2.114616 CCCTCTCAAGTACCTCAGCAT 58.885 52.381 0.00 0.00 0.00 3.79
6554 7038 3.739300 CAGATTTTTGTTTGCAGGCTCAG 59.261 43.478 0.00 0.00 0.00 3.35
6579 7063 7.027778 AGTTGAGACTCACACCAAATAAAAC 57.972 36.000 4.15 0.00 0.00 2.43
6592 7076 4.937201 TCTTACAGCAAGTTGAGACTCA 57.063 40.909 7.16 0.00 34.21 3.41
6593 7077 6.293135 CCTTTTCTTACAGCAAGTTGAGACTC 60.293 42.308 7.16 0.00 34.21 3.36
6612 7096 4.982295 GGCAACACAGAACATAACCTTTTC 59.018 41.667 0.00 0.00 0.00 2.29
6632 7116 0.178995 TGACAGTGGAAGCAATGGCA 60.179 50.000 0.00 0.00 44.61 4.92
6638 7122 5.483685 ACTTATAACTGACAGTGGAAGCA 57.516 39.130 9.33 0.00 0.00 3.91
6644 7128 7.093902 TGAGGGAAGTACTTATAACTGACAGTG 60.094 40.741 9.33 0.00 0.00 3.66
6656 7140 4.469945 CCATTCTGGTGAGGGAAGTACTTA 59.530 45.833 8.42 0.00 31.35 2.24
6704 7197 7.963532 AGTCACTAATAAACAACAGAGGAAGA 58.036 34.615 0.00 0.00 0.00 2.87
6705 7198 8.499162 CAAGTCACTAATAAACAACAGAGGAAG 58.501 37.037 0.00 0.00 0.00 3.46
6770 7271 3.403624 CCTAGCCAGGGTCAGCAA 58.596 61.111 0.00 0.00 38.41 3.91
6779 7280 0.736053 GTCGACTGAGACCTAGCCAG 59.264 60.000 8.70 0.00 35.22 4.85
6791 7292 3.741805 TCGTTATGTCTCAGTCGACTG 57.258 47.619 34.76 34.76 45.08 3.51
6792 7293 4.761235 TTTCGTTATGTCTCAGTCGACT 57.239 40.909 13.58 13.58 35.00 4.18
6793 7294 5.093457 TGATTTCGTTATGTCTCAGTCGAC 58.907 41.667 7.70 7.70 34.52 4.20
6794 7295 5.305139 TGATTTCGTTATGTCTCAGTCGA 57.695 39.130 0.00 0.00 0.00 4.20
6795 7296 5.573282 ACTTGATTTCGTTATGTCTCAGTCG 59.427 40.000 0.00 0.00 0.00 4.18
6796 7297 6.952935 ACTTGATTTCGTTATGTCTCAGTC 57.047 37.500 0.00 0.00 0.00 3.51
6797 7298 6.929049 TCAACTTGATTTCGTTATGTCTCAGT 59.071 34.615 0.00 0.00 0.00 3.41
6798 7299 7.351414 TCAACTTGATTTCGTTATGTCTCAG 57.649 36.000 0.00 0.00 0.00 3.35
6799 7300 7.905604 ATCAACTTGATTTCGTTATGTCTCA 57.094 32.000 0.00 0.00 32.13 3.27
6857 7358 1.732077 GCATGGAGATTCGCGCAAAAA 60.732 47.619 8.75 0.00 0.00 1.94
6858 7359 0.179166 GCATGGAGATTCGCGCAAAA 60.179 50.000 8.75 0.41 0.00 2.44
6859 7360 1.304509 TGCATGGAGATTCGCGCAAA 61.305 50.000 8.75 0.00 0.00 3.68
6860 7361 1.304509 TTGCATGGAGATTCGCGCAA 61.305 50.000 8.75 0.78 37.05 4.85
6861 7362 1.304509 TTTGCATGGAGATTCGCGCA 61.305 50.000 8.75 0.00 0.00 6.09
6862 7363 0.179166 TTTTGCATGGAGATTCGCGC 60.179 50.000 0.00 0.00 0.00 6.86
6863 7364 2.114056 CATTTTGCATGGAGATTCGCG 58.886 47.619 0.00 0.00 0.00 5.87
6864 7365 3.425577 TCATTTTGCATGGAGATTCGC 57.574 42.857 0.00 0.00 0.00 4.70
6865 7366 4.802039 CCTTTCATTTTGCATGGAGATTCG 59.198 41.667 0.00 0.00 0.00 3.34
6866 7367 5.969423 TCCTTTCATTTTGCATGGAGATTC 58.031 37.500 0.00 0.00 0.00 2.52
6867 7368 6.211986 TCTTCCTTTCATTTTGCATGGAGATT 59.788 34.615 0.00 0.00 0.00 2.40
6868 7369 5.718130 TCTTCCTTTCATTTTGCATGGAGAT 59.282 36.000 0.00 0.00 0.00 2.75
6869 7370 5.078949 TCTTCCTTTCATTTTGCATGGAGA 58.921 37.500 0.00 0.00 0.00 3.71
6870 7371 5.395682 TCTTCCTTTCATTTTGCATGGAG 57.604 39.130 0.00 0.00 0.00 3.86
6871 7372 6.664816 ACTATCTTCCTTTCATTTTGCATGGA 59.335 34.615 0.00 0.00 0.00 3.41
6872 7373 6.870769 ACTATCTTCCTTTCATTTTGCATGG 58.129 36.000 0.00 0.00 0.00 3.66
6873 7374 9.459640 CATACTATCTTCCTTTCATTTTGCATG 57.540 33.333 0.00 0.00 0.00 4.06
6874 7375 8.636213 CCATACTATCTTCCTTTCATTTTGCAT 58.364 33.333 0.00 0.00 0.00 3.96
6875 7376 7.833682 TCCATACTATCTTCCTTTCATTTTGCA 59.166 33.333 0.00 0.00 0.00 4.08
6876 7377 8.131731 GTCCATACTATCTTCCTTTCATTTTGC 58.868 37.037 0.00 0.00 0.00 3.68
6877 7378 9.401058 AGTCCATACTATCTTCCTTTCATTTTG 57.599 33.333 0.00 0.00 32.84 2.44
6878 7379 9.401058 CAGTCCATACTATCTTCCTTTCATTTT 57.599 33.333 0.00 0.00 33.48 1.82
6879 7380 8.772250 TCAGTCCATACTATCTTCCTTTCATTT 58.228 33.333 0.00 0.00 33.48 2.32
6880 7381 8.324191 TCAGTCCATACTATCTTCCTTTCATT 57.676 34.615 0.00 0.00 33.48 2.57
6881 7382 7.786943 TCTCAGTCCATACTATCTTCCTTTCAT 59.213 37.037 0.00 0.00 33.48 2.57
6882 7383 7.068839 GTCTCAGTCCATACTATCTTCCTTTCA 59.931 40.741 0.00 0.00 33.48 2.69
6883 7384 7.286775 AGTCTCAGTCCATACTATCTTCCTTTC 59.713 40.741 0.00 0.00 33.48 2.62
6884 7385 7.129425 AGTCTCAGTCCATACTATCTTCCTTT 58.871 38.462 0.00 0.00 33.48 3.11
6885 7386 6.678547 AGTCTCAGTCCATACTATCTTCCTT 58.321 40.000 0.00 0.00 33.48 3.36
6886 7387 6.274322 AGTCTCAGTCCATACTATCTTCCT 57.726 41.667 0.00 0.00 33.48 3.36
6887 7388 6.969993 AAGTCTCAGTCCATACTATCTTCC 57.030 41.667 0.00 0.00 33.48 3.46
6888 7389 7.229707 TGCTAAGTCTCAGTCCATACTATCTTC 59.770 40.741 0.00 0.00 33.48 2.87
6889 7390 7.063593 TGCTAAGTCTCAGTCCATACTATCTT 58.936 38.462 0.00 0.00 33.48 2.40
6890 7391 6.606069 TGCTAAGTCTCAGTCCATACTATCT 58.394 40.000 0.00 0.00 33.48 1.98
6891 7392 6.712998 TCTGCTAAGTCTCAGTCCATACTATC 59.287 42.308 0.00 0.00 33.48 2.08
6892 7393 6.606069 TCTGCTAAGTCTCAGTCCATACTAT 58.394 40.000 0.00 0.00 33.48 2.12
6893 7394 6.002653 TCTGCTAAGTCTCAGTCCATACTA 57.997 41.667 0.00 0.00 33.48 1.82
6894 7395 4.861196 TCTGCTAAGTCTCAGTCCATACT 58.139 43.478 0.00 0.00 35.91 2.12
6895 7396 4.642885 ACTCTGCTAAGTCTCAGTCCATAC 59.357 45.833 0.00 0.00 0.00 2.39
6896 7397 4.861196 ACTCTGCTAAGTCTCAGTCCATA 58.139 43.478 0.00 0.00 0.00 2.74
6897 7398 3.707316 ACTCTGCTAAGTCTCAGTCCAT 58.293 45.455 0.00 0.00 0.00 3.41
6898 7399 3.162147 ACTCTGCTAAGTCTCAGTCCA 57.838 47.619 0.00 0.00 0.00 4.02
6899 7400 5.646577 TTTACTCTGCTAAGTCTCAGTCC 57.353 43.478 0.00 0.00 0.00 3.85
6900 7401 9.078753 GTTATTTTACTCTGCTAAGTCTCAGTC 57.921 37.037 0.00 0.00 0.00 3.51
6901 7402 8.808092 AGTTATTTTACTCTGCTAAGTCTCAGT 58.192 33.333 0.00 0.00 0.00 3.41
6902 7403 9.646427 AAGTTATTTTACTCTGCTAAGTCTCAG 57.354 33.333 0.00 0.00 0.00 3.35
6924 7425 8.544597 GGCGTTACAATTCAATTTTGTTAAGTT 58.455 29.630 0.00 0.00 38.26 2.66
6925 7426 7.707035 TGGCGTTACAATTCAATTTTGTTAAGT 59.293 29.630 0.00 0.00 38.26 2.24
6926 7427 8.066668 TGGCGTTACAATTCAATTTTGTTAAG 57.933 30.769 0.00 0.00 38.26 1.85
6927 7428 8.420374 TTGGCGTTACAATTCAATTTTGTTAA 57.580 26.923 0.00 0.00 38.26 2.01
6928 7429 8.594881 ATTGGCGTTACAATTCAATTTTGTTA 57.405 26.923 0.00 0.00 37.81 2.41
6929 7430 6.910536 TTGGCGTTACAATTCAATTTTGTT 57.089 29.167 0.00 0.00 38.26 2.83
6930 7431 7.489574 AATTGGCGTTACAATTCAATTTTGT 57.510 28.000 8.40 0.09 45.24 2.83
6940 7441 2.495669 CCTCCCAAATTGGCGTTACAAT 59.504 45.455 6.48 0.00 42.56 2.71
6941 7442 1.889829 CCTCCCAAATTGGCGTTACAA 59.110 47.619 6.48 0.00 35.79 2.41
6942 7443 1.540267 CCTCCCAAATTGGCGTTACA 58.460 50.000 6.48 0.00 35.79 2.41
6943 7444 0.172578 GCCTCCCAAATTGGCGTTAC 59.827 55.000 6.48 0.00 35.79 2.50
6944 7445 2.573920 GCCTCCCAAATTGGCGTTA 58.426 52.632 6.48 0.00 35.79 3.18
6945 7446 3.376546 GCCTCCCAAATTGGCGTT 58.623 55.556 6.48 0.00 35.79 4.84
6948 7449 0.975887 TTTCAGCCTCCCAAATTGGC 59.024 50.000 6.48 0.00 46.42 4.52
6949 7450 3.986996 AATTTCAGCCTCCCAAATTGG 57.013 42.857 4.74 4.74 37.25 3.16
6950 7451 4.456566 CCAAAATTTCAGCCTCCCAAATTG 59.543 41.667 0.00 0.00 31.56 2.32
6951 7452 4.507157 CCCAAAATTTCAGCCTCCCAAATT 60.507 41.667 0.00 0.00 32.30 1.82
6952 7453 3.009363 CCCAAAATTTCAGCCTCCCAAAT 59.991 43.478 0.00 0.00 0.00 2.32
6953 7454 2.371510 CCCAAAATTTCAGCCTCCCAAA 59.628 45.455 0.00 0.00 0.00 3.28
6954 7455 1.977129 CCCAAAATTTCAGCCTCCCAA 59.023 47.619 0.00 0.00 0.00 4.12
6955 7456 1.643310 CCCAAAATTTCAGCCTCCCA 58.357 50.000 0.00 0.00 0.00 4.37
6956 7457 0.904649 CCCCAAAATTTCAGCCTCCC 59.095 55.000 0.00 0.00 0.00 4.30
6957 7458 0.904649 CCCCCAAAATTTCAGCCTCC 59.095 55.000 0.00 0.00 0.00 4.30
6958 7459 0.250234 GCCCCCAAAATTTCAGCCTC 59.750 55.000 0.00 0.00 0.00 4.70
6959 7460 0.178894 AGCCCCCAAAATTTCAGCCT 60.179 50.000 0.00 0.00 0.00 4.58
6960 7461 1.207089 GTAGCCCCCAAAATTTCAGCC 59.793 52.381 0.00 0.00 0.00 4.85
6961 7462 1.135112 CGTAGCCCCCAAAATTTCAGC 60.135 52.381 0.00 0.00 0.00 4.26
6962 7463 2.167662 ACGTAGCCCCCAAAATTTCAG 58.832 47.619 0.00 0.00 0.00 3.02
6963 7464 2.296073 ACGTAGCCCCCAAAATTTCA 57.704 45.000 0.00 0.00 0.00 2.69
6979 7481 0.874390 AGTGCATCATCGCAAAACGT 59.126 45.000 0.00 0.00 45.14 3.99
6981 7483 2.417933 AGAGAGTGCATCATCGCAAAAC 59.582 45.455 0.00 0.00 45.14 2.43
6990 7492 0.535797 CCAGCTGAGAGAGTGCATCA 59.464 55.000 17.39 0.00 0.00 3.07
7010 7512 1.485294 TACATCCGTGCAACCCTGGT 61.485 55.000 0.00 0.00 0.00 4.00
7012 7514 1.016627 CATACATCCGTGCAACCCTG 58.983 55.000 0.00 0.00 0.00 4.45
7016 7518 1.024271 ATGGCATACATCCGTGCAAC 58.976 50.000 0.00 0.00 43.00 4.17
7024 7526 5.879223 CAGAGGGAATAGAATGGCATACATC 59.121 44.000 0.00 0.00 39.40 3.06
7046 10155 6.436843 AACACAGTTAGTCAAAACTTCCAG 57.563 37.500 0.00 0.00 37.61 3.86
7048 10157 7.699391 GGTAAAACACAGTTAGTCAAAACTTCC 59.301 37.037 0.00 0.00 37.61 3.46
7050 10159 8.113173 TGGTAAAACACAGTTAGTCAAAACTT 57.887 30.769 0.00 0.00 37.61 2.66
7052 10161 7.754625 TCTGGTAAAACACAGTTAGTCAAAAC 58.245 34.615 0.00 0.00 36.17 2.43
7060 10169 5.693104 GTGACGATCTGGTAAAACACAGTTA 59.307 40.000 0.00 0.00 36.17 2.24
7092 10201 7.310664 TCTGTTTGGAACTCATTAGTACTACG 58.689 38.462 0.91 0.00 33.75 3.51
7093 10202 9.088512 CATCTGTTTGGAACTCATTAGTACTAC 57.911 37.037 0.91 0.00 33.75 2.73
7094 10203 8.258007 CCATCTGTTTGGAACTCATTAGTACTA 58.742 37.037 0.00 0.00 39.25 1.82
7095 10204 7.038302 TCCATCTGTTTGGAACTCATTAGTACT 60.038 37.037 0.00 0.00 42.82 2.73
7219 10344 0.900182 TCAGAGGGATGAGTGCACGT 60.900 55.000 12.01 1.16 0.00 4.49
7220 10345 0.459237 GTCAGAGGGATGAGTGCACG 60.459 60.000 12.01 0.00 0.00 5.34
7221 10346 0.459237 CGTCAGAGGGATGAGTGCAC 60.459 60.000 9.40 9.40 34.22 4.57
7222 10347 0.611896 TCGTCAGAGGGATGAGTGCA 60.612 55.000 0.00 0.00 36.62 4.57
7223 10348 0.532573 TTCGTCAGAGGGATGAGTGC 59.467 55.000 0.00 0.00 42.33 4.40
7224 10349 3.319137 TTTTCGTCAGAGGGATGAGTG 57.681 47.619 0.00 0.00 42.33 3.51
7247 10372 5.104900 GGTAGATAGGTTCATGTGTTGTCCT 60.105 44.000 0.00 0.00 35.85 3.85
7249 10374 4.804139 CGGTAGATAGGTTCATGTGTTGTC 59.196 45.833 0.00 0.00 0.00 3.18
7250 10375 4.755411 CGGTAGATAGGTTCATGTGTTGT 58.245 43.478 0.00 0.00 0.00 3.32
7251 10376 3.555956 GCGGTAGATAGGTTCATGTGTTG 59.444 47.826 0.00 0.00 0.00 3.33
7252 10377 3.196901 TGCGGTAGATAGGTTCATGTGTT 59.803 43.478 0.00 0.00 0.00 3.32
7303 10429 2.432510 GCTACACATGCCTCCTCTACTT 59.567 50.000 0.00 0.00 0.00 2.24
7304 10430 2.035632 GCTACACATGCCTCCTCTACT 58.964 52.381 0.00 0.00 0.00 2.57
7305 10431 1.269309 CGCTACACATGCCTCCTCTAC 60.269 57.143 0.00 0.00 0.00 2.59
7306 10432 1.032794 CGCTACACATGCCTCCTCTA 58.967 55.000 0.00 0.00 0.00 2.43
7307 10433 0.684479 TCGCTACACATGCCTCCTCT 60.684 55.000 0.00 0.00 0.00 3.69
7308 10434 0.528684 GTCGCTACACATGCCTCCTC 60.529 60.000 0.00 0.00 0.00 3.71
7309 10435 1.517832 GTCGCTACACATGCCTCCT 59.482 57.895 0.00 0.00 0.00 3.69
7310 10436 1.521681 GGTCGCTACACATGCCTCC 60.522 63.158 0.00 0.00 0.00 4.30
7311 10437 0.807667 CTGGTCGCTACACATGCCTC 60.808 60.000 0.00 0.00 0.00 4.70
7312 10438 1.219124 CTGGTCGCTACACATGCCT 59.781 57.895 0.00 0.00 0.00 4.75
7313 10439 1.084370 GTCTGGTCGCTACACATGCC 61.084 60.000 0.00 0.00 0.00 4.40
7314 10440 1.084370 GGTCTGGTCGCTACACATGC 61.084 60.000 0.00 0.00 0.00 4.06
7315 10441 0.532573 AGGTCTGGTCGCTACACATG 59.467 55.000 0.00 0.00 0.00 3.21
7316 10442 0.818296 GAGGTCTGGTCGCTACACAT 59.182 55.000 0.00 0.00 0.00 3.21
7396 10522 9.233649 CTACTCTGTTATAAATCCTCCGAGTAT 57.766 37.037 0.00 0.00 32.87 2.12
7515 10641 6.373005 TGATGGACTCACTTATCTTCCAAA 57.627 37.500 0.00 0.00 39.77 3.28
7646 10775 5.657826 TGTGTTACATTGCCAGCATATTT 57.342 34.783 0.00 0.00 0.00 1.40
7691 10820 8.772250 ACCAGCCAAATATGCATATAGTATAGT 58.228 33.333 19.39 9.34 0.00 2.12
7722 10852 4.000988 ACGCAAAACTGTAACCATAGAGG 58.999 43.478 0.00 0.00 45.67 3.69
7818 10948 5.970317 TTGTGATTGAGAATGCTGTCAAT 57.030 34.783 0.00 0.00 45.59 2.57



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.