Multiple sequence alignment - TraesCS7A01G228200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G228200 chr7A 100.000 5735 0 0 1 5735 198671915 198666181 0.000000e+00 10591.0
1 TraesCS7A01G228200 chr7A 94.068 118 7 0 2115 2232 511579731 511579614 4.570000e-41 180.0
2 TraesCS7A01G228200 chr7B 96.822 3210 60 19 2224 5415 329359129 329362314 0.000000e+00 5325.0
3 TraesCS7A01G228200 chr7B 89.551 890 63 25 591 1458 329357666 329358547 0.000000e+00 1101.0
4 TraesCS7A01G228200 chr7B 92.879 323 11 1 1451 1773 329358631 329358941 5.240000e-125 459.0
5 TraesCS7A01G228200 chr7B 96.257 187 7 0 1931 2117 329358945 329359131 2.010000e-79 307.0
6 TraesCS7A01G228200 chr7B 92.593 108 8 0 1955 2062 10606169 10606062 7.690000e-34 156.0
7 TraesCS7A01G228200 chr7B 88.462 52 4 1 5684 5735 329362301 329362350 1.730000e-05 62.1
8 TraesCS7A01G228200 chr7D 96.444 3206 79 14 2224 5415 186412403 186415587 0.000000e+00 5256.0
9 TraesCS7A01G228200 chr7D 93.902 820 31 10 635 1444 186410836 186411646 0.000000e+00 1219.0
10 TraesCS7A01G228200 chr7D 91.654 683 24 2 1456 2117 186411735 186412405 0.000000e+00 915.0
11 TraesCS7A01G228200 chr7D 86.067 445 49 8 1 441 186409333 186409768 3.130000e-127 466.0
12 TraesCS7A01G228200 chr7D 86.223 421 29 8 635 1052 186409821 186410215 4.110000e-116 429.0
13 TraesCS7A01G228200 chr7D 81.818 253 35 7 5003 5246 618063735 618063485 9.740000e-48 202.0
14 TraesCS7A01G228200 chr7D 92.593 108 6 2 1955 2061 545298029 545298135 2.770000e-33 154.0
15 TraesCS7A01G228200 chr7D 93.750 96 5 1 2113 2207 444351240 444351145 5.990000e-30 143.0
16 TraesCS7A01G228200 chr7D 90.385 52 3 1 5684 5735 186415574 186415623 3.710000e-07 67.6
17 TraesCS7A01G228200 chr5A 95.406 283 12 1 5417 5698 653929210 653929492 3.150000e-122 449.0
18 TraesCS7A01G228200 chr5A 90.909 110 10 0 1952 2061 143027528 143027637 1.290000e-31 148.0
19 TraesCS7A01G228200 chr3D 92.150 293 22 1 5415 5706 255424678 255424386 4.130000e-111 412.0
20 TraesCS7A01G228200 chr3D 82.102 352 53 7 4901 5246 142724564 142724217 5.620000e-75 292.0
21 TraesCS7A01G228200 chr3B 92.150 293 21 2 5415 5706 377115405 377115114 4.130000e-111 412.0
22 TraesCS7A01G228200 chr3B 94.444 108 6 0 1954 2061 41018472 41018579 3.550000e-37 167.0
23 TraesCS7A01G228200 chr3B 91.667 108 9 0 1955 2062 211111462 211111355 3.580000e-32 150.0
24 TraesCS7A01G228200 chr3A 92.069 290 21 2 5415 5702 319962599 319962310 1.920000e-109 407.0
25 TraesCS7A01G228200 chr3A 96.396 111 4 0 2115 2225 20795526 20795416 3.530000e-42 183.0
26 TraesCS7A01G228200 chr2D 91.781 292 23 1 5414 5704 325807606 325807315 6.920000e-109 405.0
27 TraesCS7A01G228200 chr2D 94.643 112 6 0 2114 2225 638354776 638354887 2.120000e-39 174.0
28 TraesCS7A01G228200 chr2D 92.920 113 8 0 1949 2061 625519544 625519656 1.280000e-36 165.0
29 TraesCS7A01G228200 chr6D 91.753 291 23 1 5415 5704 327022155 327021865 2.490000e-108 403.0
30 TraesCS7A01G228200 chr5D 92.014 288 22 1 5417 5703 7559709 7559996 2.490000e-108 403.0
31 TraesCS7A01G228200 chr5D 92.308 286 19 3 5415 5698 451067143 451067427 2.490000e-108 403.0
32 TraesCS7A01G228200 chr4D 91.065 291 23 3 5415 5703 301141267 301140978 1.940000e-104 390.0
33 TraesCS7A01G228200 chr4D 93.694 111 7 0 2115 2225 357780384 357780494 3.550000e-37 167.0
34 TraesCS7A01G228200 chr1D 88.450 329 28 4 4892 5212 194677670 194677344 6.970000e-104 388.0
35 TraesCS7A01G228200 chr2B 94.400 125 6 1 2111 2234 396925258 396925134 2.110000e-44 191.0
36 TraesCS7A01G228200 chr2B 93.913 115 5 2 2116 2229 182153550 182153663 7.640000e-39 172.0
37 TraesCS7A01G228200 chr1A 85.417 192 19 6 5029 5212 242793676 242793486 2.110000e-44 191.0
38 TraesCS7A01G228200 chr1B 77.812 329 57 13 4929 5246 626160413 626160090 7.590000e-44 189.0
39 TraesCS7A01G228200 chr6A 75.956 366 79 8 4889 5246 305167257 305167621 4.570000e-41 180.0
40 TraesCS7A01G228200 chr2A 75.691 362 79 8 4893 5246 675694778 675695138 7.640000e-39 172.0
41 TraesCS7A01G228200 chr5B 94.681 94 4 1 2115 2207 586399727 586399634 1.670000e-30 145.0
42 TraesCS7A01G228200 chr5B 92.857 98 7 0 2129 2226 532855562 532855659 5.990000e-30 143.0
43 TraesCS7A01G228200 chr4B 88.333 120 12 2 1955 2073 28196988 28196870 5.990000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G228200 chr7A 198666181 198671915 5734 True 10591.00 10591 100.000000 1 5735 1 chr7A.!!$R1 5734
1 TraesCS7A01G228200 chr7B 329357666 329362350 4684 False 1450.82 5325 92.794200 591 5735 5 chr7B.!!$F1 5144
2 TraesCS7A01G228200 chr7D 186409333 186415623 6290 False 1392.10 5256 90.779167 1 5735 6 chr7D.!!$F2 5734

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 477 0.179034 GCAATCCACCAGCTCCCTAG 60.179 60.000 0.00 0.0 0.00 3.02 F
1445 2489 0.246635 TCTGTAGCGCTCTTTGTCCC 59.753 55.000 16.34 0.0 0.00 4.46 F
2125 3287 0.037303 TCACGAACTACTCCCTCCGT 59.963 55.000 0.00 0.0 0.00 4.69 F
2128 3290 0.455005 CGAACTACTCCCTCCGTTCC 59.545 60.000 0.00 0.0 33.92 3.62 F
2129 3291 1.553706 GAACTACTCCCTCCGTTCCA 58.446 55.000 0.00 0.0 31.89 3.53 F
2130 3292 1.897802 GAACTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.0 31.89 3.53 F
2131 3293 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.0 0.00 3.28 F
2132 3294 2.547990 ACTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.0 0.00 2.32 F
2133 3295 2.910977 ACTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.0 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1450 2494 1.039856 CTTTCCCACCACACCCAAAG 58.960 55.000 0.00 0.0 0.00 2.77 R
2905 4072 0.035036 TGGGGAATTACGTGTTGCGA 59.965 50.000 0.00 0.0 44.77 5.10 R
3963 5132 0.250553 AAGTGCCCGTTCCGAAATCA 60.251 50.000 0.00 0.0 0.00 2.57 R
4092 5262 1.763655 AGCGATGGGATGGAGCTGA 60.764 57.895 0.00 0.0 36.73 4.26 R
4189 5359 7.569240 TGGAATCAAAACAAAGTAAATTGGGT 58.431 30.769 0.00 0.0 34.56 4.51 R
4327 5503 7.504238 ACTTGAACATAACATAAACTCCAACCA 59.496 33.333 0.00 0.0 0.00 3.67 R
4468 5644 4.833390 AGACAAATAAGAGGAAAGACCGG 58.167 43.478 0.00 0.0 44.74 5.28 R
4629 5805 6.857777 GCAGACTGCATAAAACAGATAGAT 57.142 37.500 22.62 0.0 44.26 1.98 R
4845 6024 5.069648 TCCCACAACAGCAAATAAATGACAA 59.930 36.000 0.00 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 0.800683 CGTCTTTCGCTATGCCACGA 60.801 55.000 0.00 0.00 36.32 4.35
27 28 1.571919 GTCTTTCGCTATGCCACGAT 58.428 50.000 0.00 0.00 38.25 3.73
37 38 3.616076 GCTATGCCACGATAGAGCTTCAT 60.616 47.826 0.00 0.00 39.15 2.57
38 39 4.380973 GCTATGCCACGATAGAGCTTCATA 60.381 45.833 0.00 0.00 39.15 2.15
40 41 4.607293 TGCCACGATAGAGCTTCATATT 57.393 40.909 0.00 0.00 39.15 1.28
41 42 4.309933 TGCCACGATAGAGCTTCATATTG 58.690 43.478 0.00 0.00 39.15 1.90
71 72 1.071471 CAACGTCTGGAGGTTGCCT 59.929 57.895 18.61 0.00 45.89 4.75
85 86 3.077556 GCCTGCTCCCTCTTCCGA 61.078 66.667 0.00 0.00 0.00 4.55
98 99 3.431346 CCTCTTCCGATTGCTCTTCATGA 60.431 47.826 0.00 0.00 0.00 3.07
108 109 1.590932 CTCTTCATGAAGGATGGCGG 58.409 55.000 30.33 8.02 38.88 6.13
163 164 0.400213 TTGGTGAAAGGCTGGATCGT 59.600 50.000 0.00 0.00 0.00 3.73
185 186 0.687757 AGCCGTGAGCCTCATTCCTA 60.688 55.000 0.00 0.00 45.47 2.94
187 188 1.202698 GCCGTGAGCCTCATTCCTATT 60.203 52.381 0.00 0.00 34.35 1.73
188 189 2.746472 GCCGTGAGCCTCATTCCTATTT 60.746 50.000 0.00 0.00 34.35 1.40
201 202 2.930950 TCCTATTTTCCCTTGCCATCG 58.069 47.619 0.00 0.00 0.00 3.84
202 203 2.507886 TCCTATTTTCCCTTGCCATCGA 59.492 45.455 0.00 0.00 0.00 3.59
208 209 0.617535 TCCCTTGCCATCGAGAGGAA 60.618 55.000 10.64 1.34 0.00 3.36
209 210 0.179062 CCCTTGCCATCGAGAGGAAG 60.179 60.000 10.64 10.62 0.00 3.46
210 211 0.179062 CCTTGCCATCGAGAGGAAGG 60.179 60.000 18.98 18.98 36.57 3.46
211 212 0.826715 CTTGCCATCGAGAGGAAGGA 59.173 55.000 10.64 0.00 35.47 3.36
231 232 1.381735 GGGATGGAAGGGGCAAAGG 60.382 63.158 0.00 0.00 0.00 3.11
234 235 0.251787 GATGGAAGGGGCAAAGGTGT 60.252 55.000 0.00 0.00 0.00 4.16
240 241 1.072266 AGGGGCAAAGGTGTGTCATA 58.928 50.000 0.00 0.00 0.00 2.15
277 278 1.194772 GTTCCACCGAAAGAAGAAGCG 59.805 52.381 0.00 0.00 0.00 4.68
294 295 1.364171 CGGGCCTAGAGGTTCATCG 59.636 63.158 0.84 0.00 37.57 3.84
295 296 1.392710 CGGGCCTAGAGGTTCATCGT 61.393 60.000 0.84 0.00 37.57 3.73
296 297 0.389757 GGGCCTAGAGGTTCATCGTC 59.610 60.000 0.84 0.00 37.57 4.20
297 298 1.112113 GGCCTAGAGGTTCATCGTCA 58.888 55.000 0.00 0.00 37.57 4.35
300 301 2.625790 GCCTAGAGGTTCATCGTCATCT 59.374 50.000 0.00 0.00 37.57 2.90
302 303 4.794655 GCCTAGAGGTTCATCGTCATCTTC 60.795 50.000 0.00 0.00 37.57 2.87
304 305 4.647424 AGAGGTTCATCGTCATCTTCTC 57.353 45.455 0.00 0.00 33.88 2.87
311 312 1.669604 TCGTCATCTTCTCCTCCTCG 58.330 55.000 0.00 0.00 0.00 4.63
318 319 2.821437 TCTTCTCCTCCTCGTTCCATT 58.179 47.619 0.00 0.00 0.00 3.16
325 326 2.622436 CTCCTCGTTCCATTGACCTTC 58.378 52.381 0.00 0.00 0.00 3.46
380 384 9.443283 TTCAAAAACAACTCAAAACACAATTTG 57.557 25.926 0.00 0.00 40.78 2.32
394 398 8.954950 AAACACAATTTGAAATAACACCATCA 57.045 26.923 2.79 0.00 0.00 3.07
396 400 8.592105 ACACAATTTGAAATAACACCATCAAG 57.408 30.769 2.79 0.00 33.71 3.02
402 406 4.837860 TGAAATAACACCATCAAGCCCTTT 59.162 37.500 0.00 0.00 0.00 3.11
416 420 1.534729 CCCTTTCTTTCCTTCCCACG 58.465 55.000 0.00 0.00 0.00 4.94
417 421 1.202891 CCCTTTCTTTCCTTCCCACGT 60.203 52.381 0.00 0.00 0.00 4.49
420 424 2.249844 TTCTTTCCTTCCCACGTGTC 57.750 50.000 15.65 0.00 0.00 3.67
432 436 0.868602 CACGTGTCGGTCGTCAGTTT 60.869 55.000 7.58 0.00 39.55 2.66
433 437 0.868602 ACGTGTCGGTCGTCAGTTTG 60.869 55.000 0.00 0.00 36.85 2.93
441 445 2.277084 GGTCGTCAGTTTGTCACACTT 58.723 47.619 0.00 0.00 0.00 3.16
442 446 3.450578 GGTCGTCAGTTTGTCACACTTA 58.549 45.455 0.00 0.00 0.00 2.24
443 447 3.866910 GGTCGTCAGTTTGTCACACTTAA 59.133 43.478 0.00 0.00 0.00 1.85
444 448 4.330620 GGTCGTCAGTTTGTCACACTTAAA 59.669 41.667 0.00 0.00 0.00 1.52
445 449 5.163834 GGTCGTCAGTTTGTCACACTTAAAA 60.164 40.000 0.00 0.00 0.00 1.52
446 450 5.957796 GTCGTCAGTTTGTCACACTTAAAAG 59.042 40.000 0.00 0.00 0.00 2.27
447 451 4.728608 CGTCAGTTTGTCACACTTAAAAGC 59.271 41.667 0.00 0.00 0.00 3.51
448 452 5.447279 CGTCAGTTTGTCACACTTAAAAGCT 60.447 40.000 0.00 0.00 0.00 3.74
449 453 5.739161 GTCAGTTTGTCACACTTAAAAGCTG 59.261 40.000 0.00 0.00 0.00 4.24
450 454 5.414454 TCAGTTTGTCACACTTAAAAGCTGT 59.586 36.000 0.00 0.00 0.00 4.40
451 455 6.072175 TCAGTTTGTCACACTTAAAAGCTGTT 60.072 34.615 0.00 0.00 0.00 3.16
452 456 6.251376 CAGTTTGTCACACTTAAAAGCTGTTC 59.749 38.462 0.00 0.00 0.00 3.18
453 457 4.530094 TGTCACACTTAAAAGCTGTTCG 57.470 40.909 0.00 0.00 0.00 3.95
454 458 3.311322 TGTCACACTTAAAAGCTGTTCGG 59.689 43.478 0.00 0.00 0.00 4.30
455 459 2.289547 TCACACTTAAAAGCTGTTCGGC 59.710 45.455 0.00 0.00 0.00 5.54
456 460 2.032799 CACACTTAAAAGCTGTTCGGCA 59.967 45.455 0.00 0.00 34.17 5.69
457 461 2.685897 ACACTTAAAAGCTGTTCGGCAA 59.314 40.909 0.00 0.00 34.17 4.52
458 462 3.317993 ACACTTAAAAGCTGTTCGGCAAT 59.682 39.130 0.00 0.00 34.17 3.56
459 463 3.914364 CACTTAAAAGCTGTTCGGCAATC 59.086 43.478 0.00 0.00 34.17 2.67
460 464 3.057526 ACTTAAAAGCTGTTCGGCAATCC 60.058 43.478 0.00 0.00 34.17 3.01
461 465 1.327303 AAAAGCTGTTCGGCAATCCA 58.673 45.000 6.40 0.00 34.17 3.41
462 466 0.598065 AAAGCTGTTCGGCAATCCAC 59.402 50.000 6.40 0.00 34.17 4.02
463 467 1.244019 AAGCTGTTCGGCAATCCACC 61.244 55.000 6.40 0.00 34.17 4.61
464 468 1.971167 GCTGTTCGGCAATCCACCA 60.971 57.895 0.00 0.00 0.00 4.17
465 469 1.926511 GCTGTTCGGCAATCCACCAG 61.927 60.000 0.00 0.00 0.00 4.00
466 470 1.926511 CTGTTCGGCAATCCACCAGC 61.927 60.000 0.00 0.00 0.00 4.85
467 471 1.675641 GTTCGGCAATCCACCAGCT 60.676 57.895 0.00 0.00 0.00 4.24
468 472 1.377202 TTCGGCAATCCACCAGCTC 60.377 57.895 0.00 0.00 0.00 4.09
469 473 2.819984 TTCGGCAATCCACCAGCTCC 62.820 60.000 0.00 0.00 0.00 4.70
470 474 2.440980 GGCAATCCACCAGCTCCC 60.441 66.667 0.00 0.00 0.00 4.30
471 475 2.679716 GCAATCCACCAGCTCCCT 59.320 61.111 0.00 0.00 0.00 4.20
472 476 1.635817 GGCAATCCACCAGCTCCCTA 61.636 60.000 0.00 0.00 0.00 3.53
473 477 0.179034 GCAATCCACCAGCTCCCTAG 60.179 60.000 0.00 0.00 0.00 3.02
474 478 1.500474 CAATCCACCAGCTCCCTAGA 58.500 55.000 0.00 0.00 0.00 2.43
475 479 1.839994 CAATCCACCAGCTCCCTAGAA 59.160 52.381 0.00 0.00 0.00 2.10
476 480 2.441001 CAATCCACCAGCTCCCTAGAAT 59.559 50.000 0.00 0.00 0.00 2.40
477 481 2.270434 TCCACCAGCTCCCTAGAATT 57.730 50.000 0.00 0.00 0.00 2.17
478 482 2.562296 TCCACCAGCTCCCTAGAATTT 58.438 47.619 0.00 0.00 0.00 1.82
479 483 3.731431 TCCACCAGCTCCCTAGAATTTA 58.269 45.455 0.00 0.00 0.00 1.40
480 484 4.108570 TCCACCAGCTCCCTAGAATTTAA 58.891 43.478 0.00 0.00 0.00 1.52
481 485 4.538490 TCCACCAGCTCCCTAGAATTTAAA 59.462 41.667 0.00 0.00 0.00 1.52
482 486 4.884164 CCACCAGCTCCCTAGAATTTAAAG 59.116 45.833 0.00 0.00 0.00 1.85
483 487 5.339200 CCACCAGCTCCCTAGAATTTAAAGA 60.339 44.000 0.00 0.00 0.00 2.52
484 488 6.360618 CACCAGCTCCCTAGAATTTAAAGAT 58.639 40.000 0.00 0.00 0.00 2.40
485 489 6.484977 CACCAGCTCCCTAGAATTTAAAGATC 59.515 42.308 0.00 0.00 0.00 2.75
486 490 6.388394 ACCAGCTCCCTAGAATTTAAAGATCT 59.612 38.462 10.22 10.22 0.00 2.75
487 491 6.709846 CCAGCTCCCTAGAATTTAAAGATCTG 59.290 42.308 13.75 6.10 0.00 2.90
488 492 6.204495 CAGCTCCCTAGAATTTAAAGATCTGC 59.796 42.308 13.75 9.39 0.00 4.26
489 493 5.178438 GCTCCCTAGAATTTAAAGATCTGCG 59.822 44.000 13.75 7.03 0.00 5.18
490 494 6.479972 TCCCTAGAATTTAAAGATCTGCGA 57.520 37.500 13.75 6.13 0.00 5.10
491 495 6.884832 TCCCTAGAATTTAAAGATCTGCGAA 58.115 36.000 13.75 0.00 0.00 4.70
492 496 7.335627 TCCCTAGAATTTAAAGATCTGCGAAA 58.664 34.615 13.75 0.00 0.00 3.46
493 497 7.993183 TCCCTAGAATTTAAAGATCTGCGAAAT 59.007 33.333 13.75 0.00 0.00 2.17
494 498 9.273016 CCCTAGAATTTAAAGATCTGCGAAATA 57.727 33.333 13.75 0.00 0.00 1.40
497 501 8.738645 AGAATTTAAAGATCTGCGAAATACCT 57.261 30.769 0.00 2.13 0.00 3.08
498 502 9.832445 AGAATTTAAAGATCTGCGAAATACCTA 57.168 29.630 0.00 0.00 0.00 3.08
505 509 8.819643 AAGATCTGCGAAATACCTATTTACTC 57.180 34.615 0.00 0.00 36.13 2.59
506 510 7.952671 AGATCTGCGAAATACCTATTTACTCA 58.047 34.615 0.00 0.00 36.13 3.41
507 511 7.868415 AGATCTGCGAAATACCTATTTACTCAC 59.132 37.037 0.00 0.00 36.13 3.51
508 512 7.108841 TCTGCGAAATACCTATTTACTCACT 57.891 36.000 0.00 0.00 36.13 3.41
509 513 7.553334 TCTGCGAAATACCTATTTACTCACTT 58.447 34.615 0.00 0.00 36.13 3.16
510 514 7.705325 TCTGCGAAATACCTATTTACTCACTTC 59.295 37.037 0.00 0.00 36.13 3.01
511 515 7.324935 TGCGAAATACCTATTTACTCACTTCA 58.675 34.615 0.00 0.00 36.13 3.02
512 516 7.985184 TGCGAAATACCTATTTACTCACTTCAT 59.015 33.333 0.00 0.00 36.13 2.57
513 517 9.472361 GCGAAATACCTATTTACTCACTTCATA 57.528 33.333 0.00 0.00 36.13 2.15
526 530 7.801716 ACTCACTTCATAGTTTTAAACTGCA 57.198 32.000 19.32 1.77 42.84 4.41
527 531 7.865707 ACTCACTTCATAGTTTTAAACTGCAG 58.134 34.615 19.32 13.48 42.84 4.41
528 532 6.668323 TCACTTCATAGTTTTAAACTGCAGC 58.332 36.000 19.32 0.00 42.84 5.25
529 533 6.486657 TCACTTCATAGTTTTAAACTGCAGCT 59.513 34.615 19.32 0.00 42.84 4.24
530 534 7.013274 TCACTTCATAGTTTTAAACTGCAGCTT 59.987 33.333 19.32 11.11 42.84 3.74
531 535 7.324616 CACTTCATAGTTTTAAACTGCAGCTTC 59.675 37.037 19.32 0.00 42.84 3.86
532 536 6.875948 TCATAGTTTTAAACTGCAGCTTCA 57.124 33.333 19.32 0.00 42.84 3.02
533 537 6.668323 TCATAGTTTTAAACTGCAGCTTCAC 58.332 36.000 19.32 6.16 42.84 3.18
534 538 4.307443 AGTTTTAAACTGCAGCTTCACC 57.693 40.909 15.27 0.00 41.01 4.02
535 539 3.954258 AGTTTTAAACTGCAGCTTCACCT 59.046 39.130 15.27 0.00 41.01 4.00
536 540 5.130350 AGTTTTAAACTGCAGCTTCACCTA 58.870 37.500 15.27 0.00 41.01 3.08
537 541 5.008712 AGTTTTAAACTGCAGCTTCACCTAC 59.991 40.000 15.27 3.09 41.01 3.18
538 542 2.938956 AAACTGCAGCTTCACCTACT 57.061 45.000 15.27 0.00 0.00 2.57
539 543 2.938956 AACTGCAGCTTCACCTACTT 57.061 45.000 15.27 0.00 0.00 2.24
540 544 2.938956 ACTGCAGCTTCACCTACTTT 57.061 45.000 15.27 0.00 0.00 2.66
541 545 4.351874 AACTGCAGCTTCACCTACTTTA 57.648 40.909 15.27 0.00 0.00 1.85
542 546 3.931578 ACTGCAGCTTCACCTACTTTAG 58.068 45.455 15.27 0.00 0.00 1.85
554 558 3.821421 CTACTTTAGGATTGGAGCGGT 57.179 47.619 0.00 0.00 0.00 5.68
555 559 4.931661 CTACTTTAGGATTGGAGCGGTA 57.068 45.455 0.00 0.00 0.00 4.02
556 560 3.821421 ACTTTAGGATTGGAGCGGTAG 57.179 47.619 0.00 0.00 0.00 3.18
557 561 3.371965 ACTTTAGGATTGGAGCGGTAGA 58.628 45.455 0.00 0.00 0.00 2.59
558 562 3.385111 ACTTTAGGATTGGAGCGGTAGAG 59.615 47.826 0.00 0.00 0.00 2.43
559 563 1.329256 TAGGATTGGAGCGGTAGAGC 58.671 55.000 0.00 0.00 37.41 4.09
560 564 1.300233 GGATTGGAGCGGTAGAGCG 60.300 63.158 0.00 0.00 43.00 5.03
561 565 1.300233 GATTGGAGCGGTAGAGCGG 60.300 63.158 3.04 0.00 43.00 5.52
562 566 2.701163 GATTGGAGCGGTAGAGCGGG 62.701 65.000 3.04 0.00 43.00 6.13
578 582 3.149038 GGGGGACTCCGAATAGGC 58.851 66.667 0.00 0.00 40.77 3.93
579 583 2.517798 GGGGGACTCCGAATAGGCC 61.518 68.421 0.00 0.00 44.87 5.19
581 585 4.297207 GGACTCCGAATAGGCCCT 57.703 61.111 0.00 0.00 38.95 5.19
582 586 2.051105 GGACTCCGAATAGGCCCTC 58.949 63.158 0.00 0.00 38.95 4.30
583 587 0.759436 GGACTCCGAATAGGCCCTCA 60.759 60.000 0.00 0.00 38.95 3.86
584 588 0.389757 GACTCCGAATAGGCCCTCAC 59.610 60.000 0.00 0.00 40.77 3.51
585 589 1.049289 ACTCCGAATAGGCCCTCACC 61.049 60.000 0.00 0.00 40.77 4.02
586 590 1.759459 CTCCGAATAGGCCCTCACCC 61.759 65.000 0.00 0.00 40.77 4.61
587 591 1.766461 CCGAATAGGCCCTCACCCT 60.766 63.158 0.00 0.00 36.47 4.34
588 592 1.749033 CGAATAGGCCCTCACCCTC 59.251 63.158 0.00 0.00 33.88 4.30
589 593 1.048724 CGAATAGGCCCTCACCCTCA 61.049 60.000 0.00 0.00 33.88 3.86
590 594 0.470341 GAATAGGCCCTCACCCTCAC 59.530 60.000 0.00 0.00 33.88 3.51
591 595 0.253160 AATAGGCCCTCACCCTCACA 60.253 55.000 0.00 0.00 33.88 3.58
592 596 0.983378 ATAGGCCCTCACCCTCACAC 60.983 60.000 0.00 0.00 33.88 3.82
593 597 2.106923 TAGGCCCTCACCCTCACACT 62.107 60.000 0.00 0.00 33.88 3.55
625 629 2.518349 CCCACAGCACAACCCGTT 60.518 61.111 0.00 0.00 0.00 4.44
741 1774 1.682849 CCTGACCCGTCATTTCCCA 59.317 57.895 0.00 0.00 39.13 4.37
746 1779 2.359354 CCGTCATTTCCCACGCCA 60.359 61.111 0.00 0.00 34.58 5.69
803 1837 1.077858 CAGAAAGGCAGAGCTCCCC 60.078 63.158 10.93 11.58 0.00 4.81
1263 2302 2.350498 CGTTTCGTGCTTAGTATTGGGG 59.650 50.000 0.00 0.00 0.00 4.96
1272 2311 3.624959 GCTTAGTATTGGGGGTTGAGCTT 60.625 47.826 0.00 0.00 0.00 3.74
1329 2371 4.097437 CACGGGAGTAAGTAAGCTGATGTA 59.903 45.833 0.00 0.00 44.67 2.29
1337 2379 8.654230 AGTAAGTAAGCTGATGTAATGTGATG 57.346 34.615 0.00 0.00 0.00 3.07
1367 2409 3.617263 ACACGATGCGAGATTTTAACTCC 59.383 43.478 0.00 0.00 0.00 3.85
1435 2479 0.390860 ACATCCTCCATCTGTAGCGC 59.609 55.000 0.00 0.00 0.00 5.92
1444 2488 1.929836 CATCTGTAGCGCTCTTTGTCC 59.070 52.381 16.34 0.00 0.00 4.02
1445 2489 0.246635 TCTGTAGCGCTCTTTGTCCC 59.753 55.000 16.34 0.00 0.00 4.46
1452 2496 2.358737 CTCTTTGTCCCGCCGCTT 60.359 61.111 0.00 0.00 0.00 4.68
1512 2653 4.754372 TCTTGTTTGTTAGCAGCTGATG 57.246 40.909 20.43 0.00 0.00 3.07
1513 2654 3.503363 TCTTGTTTGTTAGCAGCTGATGG 59.497 43.478 20.43 0.00 0.00 3.51
1514 2655 2.862541 TGTTTGTTAGCAGCTGATGGT 58.137 42.857 20.43 2.32 43.56 3.55
1515 2656 4.014569 TGTTTGTTAGCAGCTGATGGTA 57.985 40.909 20.43 0.03 40.89 3.25
1516 2657 4.588899 TGTTTGTTAGCAGCTGATGGTAT 58.411 39.130 20.43 0.00 41.36 2.73
1517 2658 4.635765 TGTTTGTTAGCAGCTGATGGTATC 59.364 41.667 20.43 6.01 41.36 2.24
1518 2659 3.097877 TGTTAGCAGCTGATGGTATCG 57.902 47.619 20.43 0.00 41.36 2.92
1519 2660 2.693074 TGTTAGCAGCTGATGGTATCGA 59.307 45.455 20.43 0.00 41.36 3.59
1520 2661 3.321968 TGTTAGCAGCTGATGGTATCGAT 59.678 43.478 20.43 2.16 41.36 3.59
1521 2662 2.452295 AGCAGCTGATGGTATCGATG 57.548 50.000 20.43 0.00 38.04 3.84
1522 2663 1.966354 AGCAGCTGATGGTATCGATGA 59.034 47.619 20.43 0.00 38.04 2.92
1523 2664 2.566279 AGCAGCTGATGGTATCGATGAT 59.434 45.455 20.43 0.00 38.04 2.45
1541 2682 7.762382 TCGATGATAGTATTACGATTCTGCAT 58.238 34.615 0.00 0.00 0.00 3.96
1588 2729 7.287512 CCATTGGGAAAAATGTTTTTGGATT 57.712 32.000 8.09 0.00 40.21 3.01
1667 2808 7.358931 CGATTCGATTGTGGTGTATATGTTACC 60.359 40.741 0.00 0.00 35.05 2.85
1821 2962 0.801872 TGATGTTGACGCGGGAAATG 59.198 50.000 12.47 0.00 0.00 2.32
1852 3014 6.642540 GGAAGTTCTTCAAAATCAATGGTGAC 59.357 38.462 13.44 0.00 36.31 3.67
2025 3187 5.765677 ACGTATGTCAGTGCTAGATACATCT 59.234 40.000 0.00 0.00 40.86 2.90
2040 3202 2.560504 ACATCTGTTTGAGCGACAACA 58.439 42.857 0.00 0.00 38.29 3.33
2049 3211 4.944962 TTGAGCGACAACAAATATGGAG 57.055 40.909 0.00 0.00 33.18 3.86
2091 3253 0.104725 AGCTAGGGCCTATGCTCCTT 60.105 55.000 23.47 9.13 39.53 3.36
2094 3256 2.823535 GCTAGGGCCTATGCTCCTTAGA 60.824 54.545 14.95 0.00 39.53 2.10
2117 3279 6.428159 AGATGCAAATTTCTTCACGAACTACT 59.572 34.615 0.00 0.00 0.00 2.57
2118 3280 5.985781 TGCAAATTTCTTCACGAACTACTC 58.014 37.500 0.00 0.00 0.00 2.59
2119 3281 5.049680 TGCAAATTTCTTCACGAACTACTCC 60.050 40.000 0.00 0.00 0.00 3.85
2120 3282 5.617087 GCAAATTTCTTCACGAACTACTCCC 60.617 44.000 0.00 0.00 0.00 4.30
2121 3283 5.485209 AATTTCTTCACGAACTACTCCCT 57.515 39.130 0.00 0.00 0.00 4.20
2122 3284 4.516365 TTTCTTCACGAACTACTCCCTC 57.484 45.455 0.00 0.00 0.00 4.30
2123 3285 2.444421 TCTTCACGAACTACTCCCTCC 58.556 52.381 0.00 0.00 0.00 4.30
2124 3286 1.132643 CTTCACGAACTACTCCCTCCG 59.867 57.143 0.00 0.00 0.00 4.63
2125 3287 0.037303 TCACGAACTACTCCCTCCGT 59.963 55.000 0.00 0.00 0.00 4.69
2126 3288 0.886563 CACGAACTACTCCCTCCGTT 59.113 55.000 0.00 0.00 0.00 4.44
2127 3289 1.135460 CACGAACTACTCCCTCCGTTC 60.135 57.143 0.00 0.00 34.07 3.95
2128 3290 0.455005 CGAACTACTCCCTCCGTTCC 59.545 60.000 0.00 0.00 33.92 3.62
2129 3291 1.553706 GAACTACTCCCTCCGTTCCA 58.446 55.000 0.00 0.00 31.89 3.53
2130 3292 1.897802 GAACTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.00 31.89 3.53
2131 3293 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2132 3294 2.547990 ACTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
2133 3295 2.910977 ACTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
2134 3296 4.098894 ACTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
2135 3297 3.629142 ACTCCCTCCGTTCCAAATTAG 57.371 47.619 0.00 0.00 0.00 1.73
2136 3298 2.910977 ACTCCCTCCGTTCCAAATTAGT 59.089 45.455 0.00 0.00 0.00 2.24
2137 3299 3.329814 ACTCCCTCCGTTCCAAATTAGTT 59.670 43.478 0.00 0.00 0.00 2.24
2138 3300 3.681593 TCCCTCCGTTCCAAATTAGTTG 58.318 45.455 0.00 0.00 36.94 3.16
2139 3301 3.328343 TCCCTCCGTTCCAAATTAGTTGA 59.672 43.478 0.00 0.00 39.87 3.18
2140 3302 3.439129 CCCTCCGTTCCAAATTAGTTGAC 59.561 47.826 0.00 0.00 39.87 3.18
2141 3303 4.324267 CCTCCGTTCCAAATTAGTTGACT 58.676 43.478 0.00 0.00 39.87 3.41
2142 3304 4.760204 CCTCCGTTCCAAATTAGTTGACTT 59.240 41.667 0.00 0.00 39.87 3.01
2143 3305 5.334879 CCTCCGTTCCAAATTAGTTGACTTG 60.335 44.000 0.00 0.00 39.87 3.16
2144 3306 5.369833 TCCGTTCCAAATTAGTTGACTTGA 58.630 37.500 0.00 0.00 39.87 3.02
2145 3307 5.823570 TCCGTTCCAAATTAGTTGACTTGAA 59.176 36.000 0.00 0.00 39.87 2.69
2146 3308 6.488683 TCCGTTCCAAATTAGTTGACTTGAAT 59.511 34.615 0.00 0.00 39.87 2.57
2147 3309 7.013846 TCCGTTCCAAATTAGTTGACTTGAATT 59.986 33.333 0.00 0.00 39.87 2.17
2148 3310 7.651704 CCGTTCCAAATTAGTTGACTTGAATTT 59.348 33.333 0.00 0.00 39.87 1.82
2149 3311 8.479280 CGTTCCAAATTAGTTGACTTGAATTTG 58.521 33.333 17.35 17.35 43.82 2.32
2150 3312 9.313118 GTTCCAAATTAGTTGACTTGAATTTGT 57.687 29.630 20.10 0.00 43.18 2.83
2151 3313 9.528018 TTCCAAATTAGTTGACTTGAATTTGTC 57.472 29.630 20.10 0.00 43.18 3.18
2152 3314 8.912988 TCCAAATTAGTTGACTTGAATTTGTCT 58.087 29.630 20.10 0.00 43.18 3.41
2160 3322 8.504005 AGTTGACTTGAATTTGTCTAAATACGG 58.496 33.333 8.09 0.00 35.50 4.02
2161 3323 8.500773 GTTGACTTGAATTTGTCTAAATACGGA 58.499 33.333 8.09 0.00 35.50 4.69
2162 3324 8.786826 TGACTTGAATTTGTCTAAATACGGAT 57.213 30.769 8.09 0.00 35.50 4.18
2163 3325 8.664798 TGACTTGAATTTGTCTAAATACGGATG 58.335 33.333 8.09 0.00 35.50 3.51
2164 3326 8.561738 ACTTGAATTTGTCTAAATACGGATGT 57.438 30.769 0.00 0.00 35.50 3.06
2165 3327 9.661563 ACTTGAATTTGTCTAAATACGGATGTA 57.338 29.630 0.00 0.00 35.50 2.29
2183 3345 8.910944 ACGGATGTATCTATACTTGTTTAGTGT 58.089 33.333 2.07 0.00 37.73 3.55
2184 3346 9.395707 CGGATGTATCTATACTTGTTTAGTGTC 57.604 37.037 2.07 0.00 37.73 3.67
2204 3366 8.554490 AGTGTCTAGATAAATATGGGTCAAGT 57.446 34.615 0.00 0.00 0.00 3.16
2205 3367 9.656323 AGTGTCTAGATAAATATGGGTCAAGTA 57.344 33.333 0.00 0.00 0.00 2.24
2215 3377 8.980143 AAATATGGGTCAAGTAATTTGAAACG 57.020 30.769 0.00 0.00 46.85 3.60
2216 3378 4.839668 TGGGTCAAGTAATTTGAAACGG 57.160 40.909 0.00 0.00 46.85 4.44
2217 3379 4.462133 TGGGTCAAGTAATTTGAAACGGA 58.538 39.130 0.00 0.00 46.85 4.69
2218 3380 4.888239 TGGGTCAAGTAATTTGAAACGGAA 59.112 37.500 0.00 0.00 46.85 4.30
2219 3381 5.009210 TGGGTCAAGTAATTTGAAACGGAAG 59.991 40.000 0.00 0.00 46.85 3.46
2220 3382 5.458015 GGTCAAGTAATTTGAAACGGAAGG 58.542 41.667 0.00 0.00 46.85 3.46
2221 3383 5.239963 GGTCAAGTAATTTGAAACGGAAGGA 59.760 40.000 0.00 0.00 46.85 3.36
2222 3384 6.371389 GTCAAGTAATTTGAAACGGAAGGAG 58.629 40.000 0.00 0.00 46.85 3.69
2223 3385 6.017357 GTCAAGTAATTTGAAACGGAAGGAGT 60.017 38.462 0.00 0.00 46.85 3.85
2224 3386 7.172019 GTCAAGTAATTTGAAACGGAAGGAGTA 59.828 37.037 0.00 0.00 46.85 2.59
2225 3387 7.881232 TCAAGTAATTTGAAACGGAAGGAGTAT 59.119 33.333 0.00 0.00 42.69 2.12
2243 3405 8.283699 AGGAGTATATTCTTATTACGCTCTCC 57.716 38.462 0.00 0.00 37.44 3.71
2502 3664 3.607490 AGCAATATTGGGCAGGAGATT 57.393 42.857 17.02 0.00 0.00 2.40
2712 3875 6.508777 ACCAAGCAAATAATGTAACGTGTTT 58.491 32.000 0.00 0.00 0.00 2.83
2766 3933 6.259608 AGACTTCACAATGCATATCTTGTAGC 59.740 38.462 0.00 0.00 33.96 3.58
2905 4072 4.040952 GCCTCCACTACCATCATCAAGTAT 59.959 45.833 0.00 0.00 0.00 2.12
3041 4208 3.791973 ACAAATTCAAGCAACCAACGA 57.208 38.095 0.00 0.00 0.00 3.85
3341 4508 6.830324 AGGAGCATATCAAGCTATGTGAAAAA 59.170 34.615 0.00 0.00 43.58 1.94
3443 4610 3.930634 ACTGCTGCTGAAAGGAAATTC 57.069 42.857 13.69 0.00 29.53 2.17
3744 4912 9.495754 GCTACAAATATTTCAGTCATTGAACTC 57.504 33.333 0.00 0.00 45.22 3.01
3749 4917 8.812513 AATATTTCAGTCATTGAACTCATCCA 57.187 30.769 0.00 0.00 45.22 3.41
3755 4923 8.078060 TCAGTCATTGAACTCATCCATACTTA 57.922 34.615 0.00 0.00 31.34 2.24
3785 4953 8.677148 AATGAGCCGTATCAATTTACTACAAT 57.323 30.769 0.00 0.00 31.76 2.71
3786 4954 7.709269 TGAGCCGTATCAATTTACTACAATC 57.291 36.000 0.00 0.00 0.00 2.67
3811 4980 4.800993 CACTTCTAGTTATCTTGCCTCACG 59.199 45.833 0.00 0.00 0.00 4.35
3827 4996 4.142881 GCCTCACGTGTTCTTATTTCCTTC 60.143 45.833 16.51 0.00 0.00 3.46
3963 5132 6.127897 GCAGGTCAATAGATTGCAAGTACTTT 60.128 38.462 5.07 0.00 37.25 2.66
4092 5262 7.364762 CCATATAGTTTGAGTTCACTACCAGGT 60.365 40.741 0.00 0.00 0.00 4.00
4189 5359 4.448210 GTCTGTTGGTCTACTGGAAACAA 58.552 43.478 0.00 0.00 42.06 2.83
4316 5492 8.749354 AGTTATTTGGTGGATAAAGATTGGAAC 58.251 33.333 0.00 0.00 0.00 3.62
4327 5503 4.553330 AAGATTGGAACGTGTAGACCAT 57.447 40.909 0.00 0.00 32.50 3.55
4468 5644 6.640499 TGTTGTAGCTTGCAATGTTAATTGAC 59.360 34.615 0.00 0.00 45.17 3.18
4629 5805 6.526526 TGCTAAGAACATTAGGTGTGTGTTA 58.473 36.000 0.00 0.00 41.14 2.41
4845 6024 5.833131 AGTAATGCCCATTTTCCATCGTTAT 59.167 36.000 0.00 0.00 32.50 1.89
4908 6087 2.957491 CACTGTTGGAAAAGGCAACA 57.043 45.000 0.00 0.00 41.41 3.33
4919 6098 3.077907 GGCAACACCTAGGAGGCA 58.922 61.111 17.98 0.00 39.63 4.75
4954 6133 2.566952 GCGCTAGGCAATGACAAAAT 57.433 45.000 0.00 0.00 42.87 1.82
5058 6237 3.245229 ACTGACAGACCAAATTGGCCATA 60.245 43.478 12.67 0.00 42.67 2.74
5112 6295 9.736023 TCACATATATTCTCCAAATCGATATCG 57.264 33.333 19.14 19.14 41.45 2.92
5223 6408 0.605589 AGGTCAACCGCCTTGCTTAC 60.606 55.000 0.00 0.00 42.08 2.34
5415 6600 9.654663 ACCAAACTACTCTTATAATCAGTTGAC 57.345 33.333 10.92 0.00 0.00 3.18
5416 6601 9.877178 CCAAACTACTCTTATAATCAGTTGACT 57.123 33.333 10.92 0.00 0.00 3.41
5428 6613 8.723942 ATAATCAGTTGACTAGAACAATGTCC 57.276 34.615 0.00 0.00 0.00 4.02
5429 6614 5.545063 TCAGTTGACTAGAACAATGTCCA 57.455 39.130 0.00 0.00 0.00 4.02
5430 6615 6.114187 TCAGTTGACTAGAACAATGTCCAT 57.886 37.500 0.00 0.00 0.00 3.41
5431 6616 5.934043 TCAGTTGACTAGAACAATGTCCATG 59.066 40.000 0.00 0.00 0.00 3.66
5432 6617 4.697352 AGTTGACTAGAACAATGTCCATGC 59.303 41.667 0.00 0.00 0.00 4.06
5433 6618 3.261580 TGACTAGAACAATGTCCATGCG 58.738 45.455 0.00 0.00 0.00 4.73
5434 6619 3.262420 GACTAGAACAATGTCCATGCGT 58.738 45.455 0.00 0.00 0.00 5.24
5435 6620 3.674997 ACTAGAACAATGTCCATGCGTT 58.325 40.909 0.00 0.00 0.00 4.84
5436 6621 2.995466 AGAACAATGTCCATGCGTTG 57.005 45.000 4.33 4.33 40.24 4.10
5437 6622 1.068333 AGAACAATGTCCATGCGTTGC 60.068 47.619 5.48 0.00 38.54 4.17
5438 6623 0.672889 AACAATGTCCATGCGTTGCA 59.327 45.000 5.48 0.00 44.86 4.08
5439 6624 0.672889 ACAATGTCCATGCGTTGCAA 59.327 45.000 0.00 0.00 43.62 4.08
5440 6625 1.062258 CAATGTCCATGCGTTGCAAC 58.938 50.000 19.89 19.89 43.62 4.17
5459 6644 9.216117 GTTGCAACGGGATATAAATATTCTAGT 57.784 33.333 14.90 0.00 0.00 2.57
5479 6664 9.649167 TTCTAGTAAGTTAGCTTGTGATTTACC 57.351 33.333 1.54 0.00 36.22 2.85
5480 6665 9.032624 TCTAGTAAGTTAGCTTGTGATTTACCT 57.967 33.333 1.54 0.00 36.22 3.08
5481 6666 7.907214 AGTAAGTTAGCTTGTGATTTACCTG 57.093 36.000 1.54 0.00 36.22 4.00
5482 6667 7.450903 AGTAAGTTAGCTTGTGATTTACCTGT 58.549 34.615 1.54 0.00 36.22 4.00
5483 6668 6.803154 AAGTTAGCTTGTGATTTACCTGTC 57.197 37.500 0.00 0.00 32.92 3.51
5484 6669 5.865085 AGTTAGCTTGTGATTTACCTGTCA 58.135 37.500 0.00 0.00 0.00 3.58
5485 6670 6.296026 AGTTAGCTTGTGATTTACCTGTCAA 58.704 36.000 0.00 0.00 0.00 3.18
5486 6671 6.942576 AGTTAGCTTGTGATTTACCTGTCAAT 59.057 34.615 0.00 0.00 0.00 2.57
5487 6672 8.100791 AGTTAGCTTGTGATTTACCTGTCAATA 58.899 33.333 0.00 0.00 0.00 1.90
5488 6673 8.726988 GTTAGCTTGTGATTTACCTGTCAATAA 58.273 33.333 0.00 0.00 0.00 1.40
5489 6674 7.944729 AGCTTGTGATTTACCTGTCAATAAT 57.055 32.000 0.00 0.00 0.00 1.28
5491 6676 9.461312 AGCTTGTGATTTACCTGTCAATAATAA 57.539 29.630 0.00 0.00 0.00 1.40
5495 6680 8.341903 TGTGATTTACCTGTCAATAATAATGCG 58.658 33.333 0.00 0.00 0.00 4.73
5496 6681 8.556194 GTGATTTACCTGTCAATAATAATGCGA 58.444 33.333 0.00 0.00 0.00 5.10
5497 6682 9.283768 TGATTTACCTGTCAATAATAATGCGAT 57.716 29.630 0.00 0.00 0.00 4.58
5499 6684 9.897744 ATTTACCTGTCAATAATAATGCGATTG 57.102 29.630 0.00 0.00 32.85 2.67
5500 6685 6.942532 ACCTGTCAATAATAATGCGATTGT 57.057 33.333 0.00 0.00 33.27 2.71
5501 6686 6.728200 ACCTGTCAATAATAATGCGATTGTG 58.272 36.000 0.00 0.00 33.27 3.33
5502 6687 6.318648 ACCTGTCAATAATAATGCGATTGTGT 59.681 34.615 0.00 0.00 33.27 3.72
5503 6688 7.497579 ACCTGTCAATAATAATGCGATTGTGTA 59.502 33.333 0.00 0.00 33.27 2.90
5504 6689 8.341903 CCTGTCAATAATAATGCGATTGTGTAA 58.658 33.333 0.00 0.00 33.27 2.41
5505 6690 9.715123 CTGTCAATAATAATGCGATTGTGTAAA 57.285 29.630 0.00 0.00 33.27 2.01
5515 6700 8.978564 AATGCGATTGTGTAAATAAATGTTCA 57.021 26.923 0.00 0.00 0.00 3.18
5516 6701 9.585099 AATGCGATTGTGTAAATAAATGTTCAT 57.415 25.926 0.00 0.00 0.00 2.57
5517 6702 8.613613 TGCGATTGTGTAAATAAATGTTCATC 57.386 30.769 0.00 0.00 0.00 2.92
5518 6703 7.427895 TGCGATTGTGTAAATAAATGTTCATCG 59.572 33.333 0.00 0.00 0.00 3.84
5519 6704 7.638295 GCGATTGTGTAAATAAATGTTCATCGA 59.362 33.333 0.00 0.00 0.00 3.59
5520 6705 9.484326 CGATTGTGTAAATAAATGTTCATCGAA 57.516 29.630 0.00 0.00 0.00 3.71
5529 6714 4.864916 AATGTTCATCGAATTCTGACCG 57.135 40.909 3.52 0.00 0.00 4.79
5530 6715 3.313012 TGTTCATCGAATTCTGACCGT 57.687 42.857 3.52 0.00 0.00 4.83
5531 6716 2.993220 TGTTCATCGAATTCTGACCGTG 59.007 45.455 3.52 0.00 0.00 4.94
5532 6717 3.250744 GTTCATCGAATTCTGACCGTGA 58.749 45.455 3.52 1.84 0.00 4.35
5533 6718 3.586100 TCATCGAATTCTGACCGTGAA 57.414 42.857 3.52 0.00 0.00 3.18
5534 6719 4.123497 TCATCGAATTCTGACCGTGAAT 57.877 40.909 3.52 0.00 35.88 2.57
5535 6720 4.503910 TCATCGAATTCTGACCGTGAATT 58.496 39.130 3.52 0.00 44.01 2.17
5536 6721 5.656480 TCATCGAATTCTGACCGTGAATTA 58.344 37.500 3.52 0.00 42.17 1.40
5537 6722 5.518847 TCATCGAATTCTGACCGTGAATTAC 59.481 40.000 3.52 0.00 42.17 1.89
5538 6723 4.178540 TCGAATTCTGACCGTGAATTACC 58.821 43.478 3.52 0.00 42.17 2.85
5539 6724 4.081862 TCGAATTCTGACCGTGAATTACCT 60.082 41.667 3.52 0.00 42.17 3.08
5540 6725 4.630069 CGAATTCTGACCGTGAATTACCTT 59.370 41.667 3.52 0.00 42.17 3.50
5541 6726 5.808540 CGAATTCTGACCGTGAATTACCTTA 59.191 40.000 3.52 0.00 42.17 2.69
5542 6727 6.479001 CGAATTCTGACCGTGAATTACCTTAT 59.521 38.462 3.52 0.00 42.17 1.73
5543 6728 7.650504 CGAATTCTGACCGTGAATTACCTTATA 59.349 37.037 3.52 0.00 42.17 0.98
5544 6729 9.490379 GAATTCTGACCGTGAATTACCTTATAT 57.510 33.333 0.00 0.00 42.17 0.86
5545 6730 9.847224 AATTCTGACCGTGAATTACCTTATATT 57.153 29.630 0.00 0.00 40.88 1.28
5546 6731 9.847224 ATTCTGACCGTGAATTACCTTATATTT 57.153 29.630 0.00 0.00 30.84 1.40
5547 6732 8.882415 TCTGACCGTGAATTACCTTATATTTC 57.118 34.615 0.00 0.00 0.00 2.17
5548 6733 8.479689 TCTGACCGTGAATTACCTTATATTTCA 58.520 33.333 0.00 0.00 0.00 2.69
5549 6734 9.104965 CTGACCGTGAATTACCTTATATTTCAA 57.895 33.333 0.00 0.00 0.00 2.69
5550 6735 9.621629 TGACCGTGAATTACCTTATATTTCAAT 57.378 29.630 0.00 0.00 0.00 2.57
5593 6778 8.822652 AATTAAAGTGAAATTGCTTCAGAAGG 57.177 30.769 12.30 0.00 44.83 3.46
5594 6779 5.859205 AAAGTGAAATTGCTTCAGAAGGT 57.141 34.783 12.30 0.00 44.83 3.50
5595 6780 6.959639 AAAGTGAAATTGCTTCAGAAGGTA 57.040 33.333 12.30 0.00 44.83 3.08
5596 6781 6.959639 AAGTGAAATTGCTTCAGAAGGTAA 57.040 33.333 12.30 0.00 44.83 2.85
5597 6782 6.566197 AGTGAAATTGCTTCAGAAGGTAAG 57.434 37.500 12.30 0.00 44.83 2.34
5598 6783 6.064717 AGTGAAATTGCTTCAGAAGGTAAGT 58.935 36.000 12.30 0.00 44.83 2.24
5599 6784 7.224297 AGTGAAATTGCTTCAGAAGGTAAGTA 58.776 34.615 12.30 0.00 44.83 2.24
5600 6785 7.719633 AGTGAAATTGCTTCAGAAGGTAAGTAA 59.280 33.333 12.30 0.00 44.83 2.24
5601 6786 8.515414 GTGAAATTGCTTCAGAAGGTAAGTAAT 58.485 33.333 12.30 0.00 44.83 1.89
5602 6787 9.077885 TGAAATTGCTTCAGAAGGTAAGTAATT 57.922 29.630 12.30 1.33 44.56 1.40
5607 6792 9.569122 TTGCTTCAGAAGGTAAGTAATTAAAGT 57.431 29.630 12.30 0.00 0.00 2.66
5608 6793 8.999431 TGCTTCAGAAGGTAAGTAATTAAAGTG 58.001 33.333 12.30 0.00 0.00 3.16
5609 6794 9.216117 GCTTCAGAAGGTAAGTAATTAAAGTGA 57.784 33.333 12.30 0.00 0.00 3.41
5639 6824 8.601845 TTATCATATACATGAAAGGTTGGACG 57.398 34.615 0.00 0.00 44.27 4.79
5640 6825 6.228616 TCATATACATGAAAGGTTGGACGA 57.771 37.500 0.00 0.00 38.25 4.20
5641 6826 6.645306 TCATATACATGAAAGGTTGGACGAA 58.355 36.000 0.00 0.00 38.25 3.85
5642 6827 6.761242 TCATATACATGAAAGGTTGGACGAAG 59.239 38.462 0.00 0.00 38.25 3.79
5643 6828 3.485463 ACATGAAAGGTTGGACGAAGA 57.515 42.857 0.00 0.00 0.00 2.87
5644 6829 3.403038 ACATGAAAGGTTGGACGAAGAG 58.597 45.455 0.00 0.00 0.00 2.85
5645 6830 3.071023 ACATGAAAGGTTGGACGAAGAGA 59.929 43.478 0.00 0.00 0.00 3.10
5646 6831 4.256920 CATGAAAGGTTGGACGAAGAGAT 58.743 43.478 0.00 0.00 0.00 2.75
5647 6832 3.664107 TGAAAGGTTGGACGAAGAGATG 58.336 45.455 0.00 0.00 0.00 2.90
5648 6833 2.770164 AAGGTTGGACGAAGAGATGG 57.230 50.000 0.00 0.00 0.00 3.51
5649 6834 1.645710 AGGTTGGACGAAGAGATGGT 58.354 50.000 0.00 0.00 0.00 3.55
5650 6835 1.276421 AGGTTGGACGAAGAGATGGTG 59.724 52.381 0.00 0.00 0.00 4.17
5651 6836 1.002087 GGTTGGACGAAGAGATGGTGT 59.998 52.381 0.00 0.00 0.00 4.16
5652 6837 2.069273 GTTGGACGAAGAGATGGTGTG 58.931 52.381 0.00 0.00 0.00 3.82
5653 6838 1.627864 TGGACGAAGAGATGGTGTGA 58.372 50.000 0.00 0.00 0.00 3.58
5654 6839 1.967779 TGGACGAAGAGATGGTGTGAA 59.032 47.619 0.00 0.00 0.00 3.18
5655 6840 2.029020 TGGACGAAGAGATGGTGTGAAG 60.029 50.000 0.00 0.00 0.00 3.02
5656 6841 2.231478 GGACGAAGAGATGGTGTGAAGA 59.769 50.000 0.00 0.00 0.00 2.87
5657 6842 3.306088 GGACGAAGAGATGGTGTGAAGAA 60.306 47.826 0.00 0.00 0.00 2.52
5658 6843 4.307432 GACGAAGAGATGGTGTGAAGAAA 58.693 43.478 0.00 0.00 0.00 2.52
5659 6844 4.310769 ACGAAGAGATGGTGTGAAGAAAG 58.689 43.478 0.00 0.00 0.00 2.62
5660 6845 3.681897 CGAAGAGATGGTGTGAAGAAAGG 59.318 47.826 0.00 0.00 0.00 3.11
5661 6846 4.646572 GAAGAGATGGTGTGAAGAAAGGT 58.353 43.478 0.00 0.00 0.00 3.50
5662 6847 4.013267 AGAGATGGTGTGAAGAAAGGTG 57.987 45.455 0.00 0.00 0.00 4.00
5663 6848 3.648067 AGAGATGGTGTGAAGAAAGGTGA 59.352 43.478 0.00 0.00 0.00 4.02
5664 6849 4.103153 AGAGATGGTGTGAAGAAAGGTGAA 59.897 41.667 0.00 0.00 0.00 3.18
5665 6850 4.792068 AGATGGTGTGAAGAAAGGTGAAA 58.208 39.130 0.00 0.00 0.00 2.69
5666 6851 5.388654 AGATGGTGTGAAGAAAGGTGAAAT 58.611 37.500 0.00 0.00 0.00 2.17
5667 6852 4.916983 TGGTGTGAAGAAAGGTGAAATG 57.083 40.909 0.00 0.00 0.00 2.32
5668 6853 3.636300 TGGTGTGAAGAAAGGTGAAATGG 59.364 43.478 0.00 0.00 0.00 3.16
5669 6854 3.005791 GGTGTGAAGAAAGGTGAAATGGG 59.994 47.826 0.00 0.00 0.00 4.00
5670 6855 3.888930 GTGTGAAGAAAGGTGAAATGGGA 59.111 43.478 0.00 0.00 0.00 4.37
5671 6856 4.340950 GTGTGAAGAAAGGTGAAATGGGAA 59.659 41.667 0.00 0.00 0.00 3.97
5672 6857 4.340950 TGTGAAGAAAGGTGAAATGGGAAC 59.659 41.667 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.621526 TCTATCGTGGCATAGCGAAAGA 59.378 45.455 2.73 0.00 40.61 2.52
12 13 1.335964 GCTCTATCGTGGCATAGCGAA 60.336 52.381 2.73 0.00 40.61 4.70
21 22 4.618912 CGTCAATATGAAGCTCTATCGTGG 59.381 45.833 0.00 0.00 0.00 4.94
23 24 4.230657 GCGTCAATATGAAGCTCTATCGT 58.769 43.478 10.37 0.00 46.01 3.73
54 55 1.071471 CAGGCAACCTCCAGACGTT 59.929 57.895 0.00 0.00 37.17 3.99
85 86 2.957006 GCCATCCTTCATGAAGAGCAAT 59.043 45.455 32.49 18.17 40.79 3.56
120 121 5.068329 AGCGTATTCAGAGAACATCAGATCA 59.932 40.000 0.00 0.00 0.00 2.92
121 122 5.527951 AGCGTATTCAGAGAACATCAGATC 58.472 41.667 0.00 0.00 0.00 2.75
122 123 5.528043 AGCGTATTCAGAGAACATCAGAT 57.472 39.130 0.00 0.00 0.00 2.90
125 126 4.183865 CCAAGCGTATTCAGAGAACATCA 58.816 43.478 0.00 0.00 0.00 3.07
127 128 3.935203 CACCAAGCGTATTCAGAGAACAT 59.065 43.478 0.00 0.00 0.00 2.71
171 172 3.788142 AGGGAAAATAGGAATGAGGCTCA 59.212 43.478 21.19 21.19 0.00 4.26
185 186 2.648059 CTCTCGATGGCAAGGGAAAAT 58.352 47.619 0.00 0.00 0.00 1.82
187 188 0.253044 CCTCTCGATGGCAAGGGAAA 59.747 55.000 0.00 0.00 0.00 3.13
188 189 0.617535 TCCTCTCGATGGCAAGGGAA 60.618 55.000 2.48 0.00 0.00 3.97
201 202 2.182516 TCCATCCCTTCCTTCCTCTC 57.817 55.000 0.00 0.00 0.00 3.20
202 203 2.486716 CTTCCATCCCTTCCTTCCTCT 58.513 52.381 0.00 0.00 0.00 3.69
208 209 2.009302 GCCCCTTCCATCCCTTCCT 61.009 63.158 0.00 0.00 0.00 3.36
209 210 1.874299 TTGCCCCTTCCATCCCTTCC 61.874 60.000 0.00 0.00 0.00 3.46
210 211 0.041090 TTTGCCCCTTCCATCCCTTC 59.959 55.000 0.00 0.00 0.00 3.46
211 212 0.041684 CTTTGCCCCTTCCATCCCTT 59.958 55.000 0.00 0.00 0.00 3.95
266 267 1.208293 CTCTAGGCCCGCTTCTTCTTT 59.792 52.381 0.00 0.00 0.00 2.52
277 278 0.389757 GACGATGAACCTCTAGGCCC 59.610 60.000 0.00 0.00 39.32 5.80
294 295 2.100087 GGAACGAGGAGGAGAAGATGAC 59.900 54.545 0.00 0.00 0.00 3.06
295 296 2.291605 TGGAACGAGGAGGAGAAGATGA 60.292 50.000 0.00 0.00 0.00 2.92
296 297 2.103373 TGGAACGAGGAGGAGAAGATG 58.897 52.381 0.00 0.00 0.00 2.90
297 298 2.534042 TGGAACGAGGAGGAGAAGAT 57.466 50.000 0.00 0.00 0.00 2.40
300 301 2.233922 GTCAATGGAACGAGGAGGAGAA 59.766 50.000 0.00 0.00 0.00 2.87
302 303 1.134670 GGTCAATGGAACGAGGAGGAG 60.135 57.143 0.00 0.00 0.00 3.69
304 305 0.905357 AGGTCAATGGAACGAGGAGG 59.095 55.000 0.00 0.00 35.27 4.30
318 319 3.071874 GTGGATCCACATTGAAGGTCA 57.928 47.619 35.21 0.00 45.53 4.02
336 340 4.418013 TGAAAATACCGAGTGCATTGTG 57.582 40.909 0.00 0.00 0.00 3.33
341 345 5.250235 TGTTTTTGAAAATACCGAGTGCA 57.750 34.783 0.00 0.00 0.00 4.57
347 351 8.436200 TGTTTTGAGTTGTTTTTGAAAATACCG 58.564 29.630 0.00 0.00 0.00 4.02
376 380 5.484998 AGGGCTTGATGGTGTTATTTCAAAT 59.515 36.000 0.00 0.00 0.00 2.32
378 382 4.415596 AGGGCTTGATGGTGTTATTTCAA 58.584 39.130 0.00 0.00 0.00 2.69
380 384 5.185828 AGAAAGGGCTTGATGGTGTTATTTC 59.814 40.000 0.00 0.00 0.00 2.17
394 398 1.503347 TGGGAAGGAAAGAAAGGGCTT 59.497 47.619 0.00 0.00 0.00 4.35
396 400 1.257743 GTGGGAAGGAAAGAAAGGGC 58.742 55.000 0.00 0.00 0.00 5.19
402 406 0.032952 CGACACGTGGGAAGGAAAGA 59.967 55.000 21.57 0.00 0.00 2.52
416 420 0.850856 GACAAACTGACGACCGACAC 59.149 55.000 0.00 0.00 0.00 3.67
417 421 0.456628 TGACAAACTGACGACCGACA 59.543 50.000 0.00 0.00 0.00 4.35
420 424 0.575390 GTGTGACAAACTGACGACCG 59.425 55.000 0.00 0.00 0.00 4.79
432 436 3.311322 CCGAACAGCTTTTAAGTGTGACA 59.689 43.478 0.00 0.00 0.00 3.58
433 437 3.848554 GCCGAACAGCTTTTAAGTGTGAC 60.849 47.826 0.00 0.00 0.00 3.67
441 445 2.227865 GTGGATTGCCGAACAGCTTTTA 59.772 45.455 0.00 0.00 36.79 1.52
442 446 1.000274 GTGGATTGCCGAACAGCTTTT 60.000 47.619 0.00 0.00 36.79 2.27
443 447 0.598065 GTGGATTGCCGAACAGCTTT 59.402 50.000 0.00 0.00 36.79 3.51
444 448 1.244019 GGTGGATTGCCGAACAGCTT 61.244 55.000 0.00 0.00 36.79 3.74
445 449 1.675641 GGTGGATTGCCGAACAGCT 60.676 57.895 0.00 0.00 36.79 4.24
446 450 1.926511 CTGGTGGATTGCCGAACAGC 61.927 60.000 0.00 0.00 36.79 4.40
447 451 1.926511 GCTGGTGGATTGCCGAACAG 61.927 60.000 0.00 0.00 34.86 3.16
448 452 1.971167 GCTGGTGGATTGCCGAACA 60.971 57.895 0.00 0.00 36.79 3.18
449 453 1.648467 GAGCTGGTGGATTGCCGAAC 61.648 60.000 0.00 0.00 36.79 3.95
450 454 1.377202 GAGCTGGTGGATTGCCGAA 60.377 57.895 0.00 0.00 36.79 4.30
451 455 2.268920 GAGCTGGTGGATTGCCGA 59.731 61.111 0.00 0.00 36.79 5.54
452 456 2.825836 GGAGCTGGTGGATTGCCG 60.826 66.667 0.00 0.00 36.79 5.69
453 457 1.635817 TAGGGAGCTGGTGGATTGCC 61.636 60.000 0.00 0.00 0.00 4.52
454 458 0.179034 CTAGGGAGCTGGTGGATTGC 60.179 60.000 0.00 0.00 0.00 3.56
455 459 1.500474 TCTAGGGAGCTGGTGGATTG 58.500 55.000 0.00 0.00 0.00 2.67
456 460 2.270434 TTCTAGGGAGCTGGTGGATT 57.730 50.000 0.00 0.00 0.00 3.01
457 461 2.503869 ATTCTAGGGAGCTGGTGGAT 57.496 50.000 0.00 0.00 0.00 3.41
458 462 2.270434 AATTCTAGGGAGCTGGTGGA 57.730 50.000 0.00 0.00 0.00 4.02
459 463 4.503714 TTAAATTCTAGGGAGCTGGTGG 57.496 45.455 0.00 0.00 0.00 4.61
460 464 5.745227 TCTTTAAATTCTAGGGAGCTGGTG 58.255 41.667 0.00 0.00 0.00 4.17
461 465 6.388394 AGATCTTTAAATTCTAGGGAGCTGGT 59.612 38.462 0.00 0.00 0.00 4.00
462 466 6.709846 CAGATCTTTAAATTCTAGGGAGCTGG 59.290 42.308 0.00 0.00 33.79 4.85
463 467 6.204495 GCAGATCTTTAAATTCTAGGGAGCTG 59.796 42.308 10.55 10.55 38.32 4.24
464 468 6.295249 GCAGATCTTTAAATTCTAGGGAGCT 58.705 40.000 0.00 0.00 0.00 4.09
465 469 5.178438 CGCAGATCTTTAAATTCTAGGGAGC 59.822 44.000 0.00 0.00 0.00 4.70
466 470 6.516718 TCGCAGATCTTTAAATTCTAGGGAG 58.483 40.000 0.00 0.00 0.00 4.30
467 471 6.479972 TCGCAGATCTTTAAATTCTAGGGA 57.520 37.500 0.00 2.22 0.00 4.20
468 472 7.553881 TTTCGCAGATCTTTAAATTCTAGGG 57.446 36.000 0.00 0.22 35.04 3.53
471 475 9.832445 AGGTATTTCGCAGATCTTTAAATTCTA 57.168 29.630 10.41 0.00 35.04 2.10
472 476 8.738645 AGGTATTTCGCAGATCTTTAAATTCT 57.261 30.769 10.41 7.44 35.04 2.40
479 483 9.262358 GAGTAAATAGGTATTTCGCAGATCTTT 57.738 33.333 0.00 0.00 37.16 2.52
480 484 8.421784 TGAGTAAATAGGTATTTCGCAGATCTT 58.578 33.333 0.00 0.00 37.16 2.40
481 485 7.868415 GTGAGTAAATAGGTATTTCGCAGATCT 59.132 37.037 0.00 0.00 37.16 2.75
482 486 7.868415 AGTGAGTAAATAGGTATTTCGCAGATC 59.132 37.037 0.00 0.00 37.16 2.75
483 487 7.727181 AGTGAGTAAATAGGTATTTCGCAGAT 58.273 34.615 0.00 0.00 37.16 2.90
484 488 7.108841 AGTGAGTAAATAGGTATTTCGCAGA 57.891 36.000 0.00 0.00 37.16 4.26
485 489 7.491372 TGAAGTGAGTAAATAGGTATTTCGCAG 59.509 37.037 0.00 0.00 37.16 5.18
486 490 7.324935 TGAAGTGAGTAAATAGGTATTTCGCA 58.675 34.615 0.00 0.00 37.16 5.10
487 491 7.766219 TGAAGTGAGTAAATAGGTATTTCGC 57.234 36.000 0.00 0.00 37.16 4.70
500 504 9.332502 TGCAGTTTAAAACTATGAAGTGAGTAA 57.667 29.630 0.00 0.00 40.46 2.24
501 505 8.896320 TGCAGTTTAAAACTATGAAGTGAGTA 57.104 30.769 0.00 0.00 40.46 2.59
502 506 7.520614 GCTGCAGTTTAAAACTATGAAGTGAGT 60.521 37.037 16.64 0.00 40.46 3.41
503 507 6.798959 GCTGCAGTTTAAAACTATGAAGTGAG 59.201 38.462 16.64 0.00 40.46 3.51
504 508 6.486657 AGCTGCAGTTTAAAACTATGAAGTGA 59.513 34.615 16.64 0.00 40.46 3.41
505 509 6.672147 AGCTGCAGTTTAAAACTATGAAGTG 58.328 36.000 16.64 0.00 40.46 3.16
506 510 6.884280 AGCTGCAGTTTAAAACTATGAAGT 57.116 33.333 16.64 0.00 40.46 3.01
507 511 7.324616 GTGAAGCTGCAGTTTAAAACTATGAAG 59.675 37.037 16.35 0.00 40.46 3.02
508 512 7.138736 GTGAAGCTGCAGTTTAAAACTATGAA 58.861 34.615 16.35 0.00 40.46 2.57
509 513 6.293955 GGTGAAGCTGCAGTTTAAAACTATGA 60.294 38.462 16.35 0.00 40.46 2.15
510 514 5.858581 GGTGAAGCTGCAGTTTAAAACTATG 59.141 40.000 16.35 0.00 40.46 2.23
511 515 5.770162 AGGTGAAGCTGCAGTTTAAAACTAT 59.230 36.000 16.35 5.93 40.46 2.12
512 516 5.130350 AGGTGAAGCTGCAGTTTAAAACTA 58.870 37.500 16.35 0.00 40.46 2.24
513 517 3.954258 AGGTGAAGCTGCAGTTTAAAACT 59.046 39.130 16.35 12.37 44.06 2.66
514 518 4.307443 AGGTGAAGCTGCAGTTTAAAAC 57.693 40.909 16.35 13.81 0.00 2.43
515 519 5.130350 AGTAGGTGAAGCTGCAGTTTAAAA 58.870 37.500 16.35 2.37 0.00 1.52
516 520 4.714632 AGTAGGTGAAGCTGCAGTTTAAA 58.285 39.130 16.35 4.96 0.00 1.52
517 521 4.351874 AGTAGGTGAAGCTGCAGTTTAA 57.648 40.909 16.35 5.95 0.00 1.52
518 522 4.351874 AAGTAGGTGAAGCTGCAGTTTA 57.648 40.909 16.35 2.81 0.00 2.01
519 523 2.938956 AGTAGGTGAAGCTGCAGTTT 57.061 45.000 16.33 16.33 0.00 2.66
520 524 2.938956 AAGTAGGTGAAGCTGCAGTT 57.061 45.000 16.64 6.37 0.00 3.16
521 525 2.938956 AAAGTAGGTGAAGCTGCAGT 57.061 45.000 16.64 0.00 0.00 4.40
522 526 3.055819 TCCTAAAGTAGGTGAAGCTGCAG 60.056 47.826 10.11 10.11 46.32 4.41
523 527 2.903784 TCCTAAAGTAGGTGAAGCTGCA 59.096 45.455 1.02 0.00 46.32 4.41
524 528 3.611766 TCCTAAAGTAGGTGAAGCTGC 57.388 47.619 1.34 0.00 46.32 5.25
525 529 4.878397 CCAATCCTAAAGTAGGTGAAGCTG 59.122 45.833 1.34 0.00 46.32 4.24
526 530 4.783227 TCCAATCCTAAAGTAGGTGAAGCT 59.217 41.667 1.34 0.00 46.32 3.74
527 531 5.099042 TCCAATCCTAAAGTAGGTGAAGC 57.901 43.478 1.34 0.00 46.32 3.86
528 532 5.119694 GCTCCAATCCTAAAGTAGGTGAAG 58.880 45.833 1.34 0.00 46.32 3.02
529 533 4.382685 CGCTCCAATCCTAAAGTAGGTGAA 60.383 45.833 1.34 0.00 46.32 3.18
530 534 3.132289 CGCTCCAATCCTAAAGTAGGTGA 59.868 47.826 1.34 0.00 46.32 4.02
531 535 3.458189 CGCTCCAATCCTAAAGTAGGTG 58.542 50.000 1.34 0.00 46.32 4.00
532 536 2.434702 CCGCTCCAATCCTAAAGTAGGT 59.565 50.000 1.34 0.00 46.32 3.08
534 538 3.821421 ACCGCTCCAATCCTAAAGTAG 57.179 47.619 0.00 0.00 0.00 2.57
535 539 4.539726 TCTACCGCTCCAATCCTAAAGTA 58.460 43.478 0.00 0.00 0.00 2.24
536 540 3.371965 TCTACCGCTCCAATCCTAAAGT 58.628 45.455 0.00 0.00 0.00 2.66
537 541 3.800604 GCTCTACCGCTCCAATCCTAAAG 60.801 52.174 0.00 0.00 0.00 1.85
538 542 2.102588 GCTCTACCGCTCCAATCCTAAA 59.897 50.000 0.00 0.00 0.00 1.85
539 543 1.687123 GCTCTACCGCTCCAATCCTAA 59.313 52.381 0.00 0.00 0.00 2.69
540 544 1.329256 GCTCTACCGCTCCAATCCTA 58.671 55.000 0.00 0.00 0.00 2.94
541 545 1.739338 CGCTCTACCGCTCCAATCCT 61.739 60.000 0.00 0.00 0.00 3.24
542 546 1.300233 CGCTCTACCGCTCCAATCC 60.300 63.158 0.00 0.00 0.00 3.01
543 547 1.300233 CCGCTCTACCGCTCCAATC 60.300 63.158 0.00 0.00 0.00 2.67
544 548 2.797278 CCCGCTCTACCGCTCCAAT 61.797 63.158 0.00 0.00 0.00 3.16
545 549 3.458163 CCCGCTCTACCGCTCCAA 61.458 66.667 0.00 0.00 0.00 3.53
561 565 2.517798 GGCCTATTCGGAGTCCCCC 61.518 68.421 2.80 0.00 33.16 5.40
562 566 2.517798 GGGCCTATTCGGAGTCCCC 61.518 68.421 0.84 0.00 33.16 4.81
563 567 1.459730 AGGGCCTATTCGGAGTCCC 60.460 63.158 2.82 0.00 33.86 4.46
564 568 0.759436 TGAGGGCCTATTCGGAGTCC 60.759 60.000 5.73 0.00 33.16 3.85
565 569 0.389757 GTGAGGGCCTATTCGGAGTC 59.610 60.000 5.73 0.00 33.16 3.36
566 570 1.049289 GGTGAGGGCCTATTCGGAGT 61.049 60.000 5.73 0.00 33.16 3.85
567 571 1.749033 GGTGAGGGCCTATTCGGAG 59.251 63.158 5.73 0.00 33.16 4.63
568 572 1.764854 GGGTGAGGGCCTATTCGGA 60.765 63.158 5.73 0.00 33.16 4.55
569 573 1.759459 GAGGGTGAGGGCCTATTCGG 61.759 65.000 5.73 0.00 0.00 4.30
570 574 1.048724 TGAGGGTGAGGGCCTATTCG 61.049 60.000 5.73 0.00 0.00 3.34
571 575 0.470341 GTGAGGGTGAGGGCCTATTC 59.530 60.000 5.73 0.00 0.00 1.75
572 576 0.253160 TGTGAGGGTGAGGGCCTATT 60.253 55.000 5.73 0.00 0.00 1.73
573 577 0.983378 GTGTGAGGGTGAGGGCCTAT 60.983 60.000 5.73 0.00 0.00 2.57
574 578 1.612442 GTGTGAGGGTGAGGGCCTA 60.612 63.158 5.73 0.00 0.00 3.93
575 579 2.930562 GTGTGAGGGTGAGGGCCT 60.931 66.667 5.25 5.25 0.00 5.19
576 580 2.930562 AGTGTGAGGGTGAGGGCC 60.931 66.667 0.00 0.00 0.00 5.80
577 581 2.217038 TGAGTGTGAGGGTGAGGGC 61.217 63.158 0.00 0.00 0.00 5.19
578 582 1.121407 TGTGAGTGTGAGGGTGAGGG 61.121 60.000 0.00 0.00 0.00 4.30
579 583 0.034059 GTGTGAGTGTGAGGGTGAGG 59.966 60.000 0.00 0.00 0.00 3.86
580 584 1.000283 GAGTGTGAGTGTGAGGGTGAG 60.000 57.143 0.00 0.00 0.00 3.51
581 585 1.040646 GAGTGTGAGTGTGAGGGTGA 58.959 55.000 0.00 0.00 0.00 4.02
582 586 0.752658 TGAGTGTGAGTGTGAGGGTG 59.247 55.000 0.00 0.00 0.00 4.61
583 587 0.753262 GTGAGTGTGAGTGTGAGGGT 59.247 55.000 0.00 0.00 0.00 4.34
584 588 0.752658 TGTGAGTGTGAGTGTGAGGG 59.247 55.000 0.00 0.00 0.00 4.30
585 589 1.539065 GGTGTGAGTGTGAGTGTGAGG 60.539 57.143 0.00 0.00 0.00 3.86
586 590 1.410517 AGGTGTGAGTGTGAGTGTGAG 59.589 52.381 0.00 0.00 0.00 3.51
587 591 1.136891 CAGGTGTGAGTGTGAGTGTGA 59.863 52.381 0.00 0.00 0.00 3.58
588 592 1.575244 CAGGTGTGAGTGTGAGTGTG 58.425 55.000 0.00 0.00 0.00 3.82
589 593 0.179073 GCAGGTGTGAGTGTGAGTGT 60.179 55.000 0.00 0.00 0.00 3.55
590 594 0.882042 GGCAGGTGTGAGTGTGAGTG 60.882 60.000 0.00 0.00 0.00 3.51
591 595 1.447643 GGCAGGTGTGAGTGTGAGT 59.552 57.895 0.00 0.00 0.00 3.41
592 596 1.302033 GGGCAGGTGTGAGTGTGAG 60.302 63.158 0.00 0.00 0.00 3.51
593 597 2.069430 TGGGCAGGTGTGAGTGTGA 61.069 57.895 0.00 0.00 0.00 3.58
619 623 1.228154 GGCCTGAAGTGAAACGGGT 60.228 57.895 0.00 0.00 45.86 5.28
625 629 1.741401 CGATGCGGCCTGAAGTGAA 60.741 57.895 0.00 0.00 0.00 3.18
741 1774 0.179023 TTCCTAAAAACGGGTGGCGT 60.179 50.000 0.00 0.00 0.00 5.68
887 1923 3.313524 GCTTGCTTGGGTTGGGGG 61.314 66.667 0.00 0.00 0.00 5.40
888 1924 3.313524 GGCTTGCTTGGGTTGGGG 61.314 66.667 0.00 0.00 0.00 4.96
892 1928 1.384191 CCTAGGGCTTGCTTGGGTT 59.616 57.895 0.00 0.00 0.00 4.11
1072 2111 1.111116 CCCTACCGCTACCGAATCCA 61.111 60.000 0.00 0.00 36.29 3.41
1214 2253 3.012722 CCTCCGGCTACCCCCAAA 61.013 66.667 0.00 0.00 0.00 3.28
1256 2295 0.324275 GCCAAGCTCAACCCCCAATA 60.324 55.000 0.00 0.00 0.00 1.90
1272 2311 3.371097 GAGGAACATCTCGGCGCCA 62.371 63.158 28.98 12.94 0.00 5.69
1329 2371 1.400113 CGTGTCAAAGCGCATCACATT 60.400 47.619 11.47 0.00 0.00 2.71
1337 2379 2.571611 CGCATCGTGTCAAAGCGC 60.572 61.111 0.00 0.00 41.95 5.92
1354 2396 2.170817 AGCTCCGGGGAGTTAAAATCTC 59.829 50.000 4.80 0.00 43.70 2.75
1367 2409 2.464459 GCACAATCGAAGCTCCGGG 61.464 63.158 0.00 0.00 0.00 5.73
1435 2479 1.966451 AAAGCGGCGGGACAAAGAG 60.966 57.895 9.78 0.00 0.00 2.85
1449 2493 1.045911 TTTCCCACCACACCCAAAGC 61.046 55.000 0.00 0.00 0.00 3.51
1450 2494 1.039856 CTTTCCCACCACACCCAAAG 58.960 55.000 0.00 0.00 0.00 2.77
1452 2496 1.456705 GCTTTCCCACCACACCCAA 60.457 57.895 0.00 0.00 0.00 4.12
1512 2653 9.653067 CAGAATCGTAATACTATCATCGATACC 57.347 37.037 0.00 0.00 37.11 2.73
1513 2654 9.160576 GCAGAATCGTAATACTATCATCGATAC 57.839 37.037 0.00 0.00 37.11 2.24
1514 2655 8.889717 TGCAGAATCGTAATACTATCATCGATA 58.110 33.333 0.00 0.00 37.11 2.92
1515 2656 7.762382 TGCAGAATCGTAATACTATCATCGAT 58.238 34.615 0.00 0.00 39.19 3.59
1516 2657 7.141100 TGCAGAATCGTAATACTATCATCGA 57.859 36.000 0.00 0.00 0.00 3.59
1517 2658 7.698130 TCATGCAGAATCGTAATACTATCATCG 59.302 37.037 0.00 0.00 0.00 3.84
1518 2659 8.917415 TCATGCAGAATCGTAATACTATCATC 57.083 34.615 0.00 0.00 0.00 2.92
1519 2660 9.881649 AATCATGCAGAATCGTAATACTATCAT 57.118 29.630 0.00 0.00 0.00 2.45
1520 2661 9.710900 AAATCATGCAGAATCGTAATACTATCA 57.289 29.630 0.00 0.00 0.00 2.15
1523 2664 9.639601 CCTAAATCATGCAGAATCGTAATACTA 57.360 33.333 0.00 0.00 0.00 1.82
1541 2682 5.751586 GGTACCATCTGAAACCCTAAATCA 58.248 41.667 7.15 0.00 0.00 2.57
1598 2739 7.222805 TCGAATTCAATCTACACAGATAACAGC 59.777 37.037 6.22 0.00 40.81 4.40
1667 2808 7.678947 AATCTTGTGATTGTAGAACCAAGAG 57.321 36.000 13.22 0.00 40.88 2.85
1705 2846 5.890424 TGATTTGTTAAATCCTCGGAACC 57.110 39.130 10.72 0.00 45.23 3.62
1821 2962 6.877611 TGATTTTGAAGAACTTCCCACTAC 57.122 37.500 11.30 1.66 38.77 2.73
1877 3039 7.274250 GCTTTCAGCATACTTACAAAAAGGATG 59.726 37.037 5.72 5.72 41.89 3.51
2025 3187 4.517075 TCCATATTTGTTGTCGCTCAAACA 59.483 37.500 0.00 0.00 37.81 2.83
2040 3202 5.072329 CACATACTCCCTCCACTCCATATTT 59.928 44.000 0.00 0.00 0.00 1.40
2049 3211 2.084546 GCAAACACATACTCCCTCCAC 58.915 52.381 0.00 0.00 0.00 4.02
2091 3253 6.801539 AGTTCGTGAAGAAATTTGCATCTA 57.198 33.333 0.00 0.00 41.10 1.98
2094 3256 6.348540 GGAGTAGTTCGTGAAGAAATTTGCAT 60.349 38.462 0.00 0.00 41.10 3.96
2117 3279 3.328343 TCAACTAATTTGGAACGGAGGGA 59.672 43.478 0.00 0.00 35.69 4.20
2118 3280 3.439129 GTCAACTAATTTGGAACGGAGGG 59.561 47.826 0.00 0.00 35.69 4.30
2119 3281 4.324267 AGTCAACTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 35.69 4.30
2120 3282 5.468746 TCAAGTCAACTAATTTGGAACGGAG 59.531 40.000 0.00 0.00 35.69 4.63
2121 3283 5.369833 TCAAGTCAACTAATTTGGAACGGA 58.630 37.500 0.00 0.00 35.69 4.69
2122 3284 5.682943 TCAAGTCAACTAATTTGGAACGG 57.317 39.130 0.00 0.00 35.69 4.44
2123 3285 8.479280 CAAATTCAAGTCAACTAATTTGGAACG 58.521 33.333 16.45 0.00 41.93 3.95
2124 3286 9.313118 ACAAATTCAAGTCAACTAATTTGGAAC 57.687 29.630 22.68 0.00 46.31 3.62
2125 3287 9.528018 GACAAATTCAAGTCAACTAATTTGGAA 57.472 29.630 22.68 7.42 46.31 3.53
2126 3288 8.912988 AGACAAATTCAAGTCAACTAATTTGGA 58.087 29.630 22.68 1.26 46.31 3.53
2134 3296 8.504005 CCGTATTTAGACAAATTCAAGTCAACT 58.496 33.333 7.95 0.00 37.23 3.16
2135 3297 8.500773 TCCGTATTTAGACAAATTCAAGTCAAC 58.499 33.333 7.95 0.00 37.23 3.18
2136 3298 8.610248 TCCGTATTTAGACAAATTCAAGTCAA 57.390 30.769 7.95 0.00 37.23 3.18
2137 3299 8.664798 CATCCGTATTTAGACAAATTCAAGTCA 58.335 33.333 7.95 0.00 37.23 3.41
2138 3300 8.665685 ACATCCGTATTTAGACAAATTCAAGTC 58.334 33.333 0.00 0.00 35.88 3.01
2139 3301 8.561738 ACATCCGTATTTAGACAAATTCAAGT 57.438 30.769 0.00 0.00 35.88 3.16
2157 3319 8.910944 ACACTAAACAAGTATAGATACATCCGT 58.089 33.333 2.66 0.00 35.76 4.69
2158 3320 9.395707 GACACTAAACAAGTATAGATACATCCG 57.604 37.037 2.66 0.00 35.76 4.18
2178 3340 9.656323 ACTTGACCCATATTTATCTAGACACTA 57.344 33.333 0.00 0.00 0.00 2.74
2179 3341 8.554490 ACTTGACCCATATTTATCTAGACACT 57.446 34.615 0.00 0.00 0.00 3.55
2190 3352 8.032451 CCGTTTCAAATTACTTGACCCATATTT 58.968 33.333 0.00 0.00 43.90 1.40
2191 3353 7.394923 TCCGTTTCAAATTACTTGACCCATATT 59.605 33.333 0.00 0.00 43.90 1.28
2192 3354 6.887545 TCCGTTTCAAATTACTTGACCCATAT 59.112 34.615 0.00 0.00 43.90 1.78
2193 3355 6.239396 TCCGTTTCAAATTACTTGACCCATA 58.761 36.000 0.00 0.00 43.90 2.74
2194 3356 5.074115 TCCGTTTCAAATTACTTGACCCAT 58.926 37.500 0.00 0.00 43.90 4.00
2195 3357 4.462133 TCCGTTTCAAATTACTTGACCCA 58.538 39.130 0.00 0.00 43.90 4.51
2196 3358 5.441709 TTCCGTTTCAAATTACTTGACCC 57.558 39.130 0.00 0.00 43.90 4.46
2197 3359 5.239963 TCCTTCCGTTTCAAATTACTTGACC 59.760 40.000 0.00 0.00 43.90 4.02
2198 3360 6.017357 ACTCCTTCCGTTTCAAATTACTTGAC 60.017 38.462 0.00 0.00 43.90 3.18
2199 3361 6.059484 ACTCCTTCCGTTTCAAATTACTTGA 58.941 36.000 0.00 0.00 42.48 3.02
2200 3362 6.313744 ACTCCTTCCGTTTCAAATTACTTG 57.686 37.500 0.00 0.00 36.25 3.16
2201 3363 9.901172 ATATACTCCTTCCGTTTCAAATTACTT 57.099 29.630 0.00 0.00 0.00 2.24
2202 3364 9.901172 AATATACTCCTTCCGTTTCAAATTACT 57.099 29.630 0.00 0.00 0.00 2.24
2205 3367 9.462606 AAGAATATACTCCTTCCGTTTCAAATT 57.537 29.630 0.00 0.00 0.00 1.82
2211 3373 9.688592 CGTAATAAGAATATACTCCTTCCGTTT 57.311 33.333 0.00 0.00 0.00 3.60
2212 3374 7.811713 GCGTAATAAGAATATACTCCTTCCGTT 59.188 37.037 0.00 0.00 0.00 4.44
2213 3375 7.176340 AGCGTAATAAGAATATACTCCTTCCGT 59.824 37.037 0.00 0.00 0.00 4.69
2214 3376 7.536855 AGCGTAATAAGAATATACTCCTTCCG 58.463 38.462 0.00 0.00 0.00 4.30
2215 3377 8.741841 AGAGCGTAATAAGAATATACTCCTTCC 58.258 37.037 0.00 0.00 0.00 3.46
2216 3378 9.777575 GAGAGCGTAATAAGAATATACTCCTTC 57.222 37.037 0.00 0.00 0.00 3.46
2217 3379 8.741841 GGAGAGCGTAATAAGAATATACTCCTT 58.258 37.037 0.00 0.00 36.91 3.36
2218 3380 7.889073 TGGAGAGCGTAATAAGAATATACTCCT 59.111 37.037 0.00 0.00 39.46 3.69
2219 3381 8.053026 TGGAGAGCGTAATAAGAATATACTCC 57.947 38.462 0.00 0.00 39.27 3.85
2361 3523 8.866093 AGAGAGGCTAAGATTAGGTTAAATCTC 58.134 37.037 2.00 0.00 43.75 2.75
2712 3875 4.082733 CGAAACTAGATCCGCATCCATAGA 60.083 45.833 0.00 0.00 0.00 1.98
2766 3933 6.128282 ACAAACAAGCATCATAGTAAGGAACG 60.128 38.462 0.00 0.00 0.00 3.95
2905 4072 0.035036 TGGGGAATTACGTGTTGCGA 59.965 50.000 0.00 0.00 44.77 5.10
3041 4208 7.619050 CCAGCTTATCCATAGATATCTGTTGT 58.381 38.462 15.79 0.05 35.87 3.32
3341 4508 1.308998 CCTCAAGACGCTTGTGGTTT 58.691 50.000 21.96 0.00 0.00 3.27
3443 4610 7.490725 GGATGATCACATTCAGATAATAGTCCG 59.509 40.741 0.00 0.00 36.82 4.79
3744 4912 5.579904 CGGCTCATTCATCTAAGTATGGATG 59.420 44.000 0.00 0.00 43.74 3.51
3749 4917 7.468141 TGATACGGCTCATTCATCTAAGTAT 57.532 36.000 0.00 0.00 0.00 2.12
3755 4923 7.220030 AGTAAATTGATACGGCTCATTCATCT 58.780 34.615 0.00 0.00 0.00 2.90
3785 4953 3.447586 AGGCAAGATAACTAGAAGTGCGA 59.552 43.478 0.00 0.00 0.00 5.10
3786 4954 3.786635 AGGCAAGATAACTAGAAGTGCG 58.213 45.455 0.00 0.00 0.00 5.34
3827 4996 8.562892 ACATATCGGCTTGAATATTCAAAAGAG 58.437 33.333 26.57 18.00 45.61 2.85
3963 5132 0.250553 AAGTGCCCGTTCCGAAATCA 60.251 50.000 0.00 0.00 0.00 2.57
4092 5262 1.763655 AGCGATGGGATGGAGCTGA 60.764 57.895 0.00 0.00 36.73 4.26
4189 5359 7.569240 TGGAATCAAAACAAAGTAAATTGGGT 58.431 30.769 0.00 0.00 34.56 4.51
4327 5503 7.504238 ACTTGAACATAACATAAACTCCAACCA 59.496 33.333 0.00 0.00 0.00 3.67
4468 5644 4.833390 AGACAAATAAGAGGAAAGACCGG 58.167 43.478 0.00 0.00 44.74 5.28
4629 5805 6.857777 GCAGACTGCATAAAACAGATAGAT 57.142 37.500 22.62 0.00 44.26 1.98
4845 6024 5.069648 TCCCACAACAGCAAATAAATGACAA 59.930 36.000 0.00 0.00 0.00 3.18
4908 6087 0.042731 TGCCTAAGTGCCTCCTAGGT 59.957 55.000 9.08 0.00 37.80 3.08
4915 6094 1.672356 CAAGCGTGCCTAAGTGCCT 60.672 57.895 0.00 0.00 0.00 4.75
4917 6096 1.790387 CTCAAGCGTGCCTAAGTGC 59.210 57.895 0.00 0.00 0.00 4.40
4918 6097 1.790387 GCTCAAGCGTGCCTAAGTG 59.210 57.895 0.00 0.00 0.00 3.16
4919 6098 4.285851 GCTCAAGCGTGCCTAAGT 57.714 55.556 0.00 0.00 0.00 2.24
5042 6221 3.992999 TGGAATATGGCCAATTTGGTCT 58.007 40.909 20.18 8.98 44.07 3.85
5058 6237 5.203528 ACTACCAGCTATTGCAATTGGAAT 58.796 37.500 27.68 25.65 42.74 3.01
5110 6293 8.160765 ACCATGTTGTATTTGGGATATTATCGA 58.839 33.333 0.00 0.00 34.72 3.59
5111 6294 8.335532 ACCATGTTGTATTTGGGATATTATCG 57.664 34.615 0.00 0.00 34.72 2.92
5403 6588 8.321353 TGGACATTGTTCTAGTCAACTGATTAT 58.679 33.333 0.00 0.00 34.04 1.28
5415 6600 3.728864 GCAACGCATGGACATTGTTCTAG 60.729 47.826 0.00 0.00 0.00 2.43
5416 6601 2.161410 GCAACGCATGGACATTGTTCTA 59.839 45.455 0.00 0.00 0.00 2.10
5417 6602 1.068333 GCAACGCATGGACATTGTTCT 60.068 47.619 0.00 0.00 0.00 3.01
5418 6603 1.335780 TGCAACGCATGGACATTGTTC 60.336 47.619 0.00 0.00 31.71 3.18
5419 6604 0.672889 TGCAACGCATGGACATTGTT 59.327 45.000 0.00 0.00 31.71 2.83
5420 6605 0.672889 TTGCAACGCATGGACATTGT 59.327 45.000 0.00 0.00 38.76 2.71
5421 6606 1.062258 GTTGCAACGCATGGACATTG 58.938 50.000 14.90 0.00 38.76 2.82
5422 6607 0.387112 CGTTGCAACGCATGGACATT 60.387 50.000 35.89 0.00 46.06 2.71
5423 6608 1.209898 CGTTGCAACGCATGGACAT 59.790 52.632 35.89 0.00 46.06 3.06
5424 6609 2.636462 CGTTGCAACGCATGGACA 59.364 55.556 35.89 0.00 46.06 4.02
5433 6618 9.216117 ACTAGAATATTTATATCCCGTTGCAAC 57.784 33.333 19.89 19.89 0.00 4.17
5453 6638 9.649167 GGTAAATCACAAGCTAACTTACTAGAA 57.351 33.333 0.00 0.00 33.74 2.10
5454 6639 9.032624 AGGTAAATCACAAGCTAACTTACTAGA 57.967 33.333 0.00 0.00 33.74 2.43
5455 6640 9.088512 CAGGTAAATCACAAGCTAACTTACTAG 57.911 37.037 0.00 0.00 33.74 2.57
5456 6641 8.591072 ACAGGTAAATCACAAGCTAACTTACTA 58.409 33.333 0.00 0.00 33.74 1.82
5457 6642 7.450903 ACAGGTAAATCACAAGCTAACTTACT 58.549 34.615 0.00 0.00 33.74 2.24
5458 6643 7.386848 TGACAGGTAAATCACAAGCTAACTTAC 59.613 37.037 0.00 0.00 33.74 2.34
5459 6644 7.446769 TGACAGGTAAATCACAAGCTAACTTA 58.553 34.615 0.00 0.00 33.74 2.24
5460 6645 6.296026 TGACAGGTAAATCACAAGCTAACTT 58.704 36.000 0.00 0.00 36.19 2.66
5461 6646 5.865085 TGACAGGTAAATCACAAGCTAACT 58.135 37.500 0.00 0.00 0.00 2.24
5462 6647 6.554334 TTGACAGGTAAATCACAAGCTAAC 57.446 37.500 0.00 0.00 0.00 2.34
5463 6648 8.856153 TTATTGACAGGTAAATCACAAGCTAA 57.144 30.769 0.00 0.00 0.00 3.09
5465 6650 7.944729 ATTATTGACAGGTAAATCACAAGCT 57.055 32.000 0.00 0.00 0.00 3.74
5469 6654 8.341903 CGCATTATTATTGACAGGTAAATCACA 58.658 33.333 0.00 0.00 0.00 3.58
5470 6655 8.556194 TCGCATTATTATTGACAGGTAAATCAC 58.444 33.333 0.00 0.00 0.00 3.06
5471 6656 8.669946 TCGCATTATTATTGACAGGTAAATCA 57.330 30.769 0.00 0.00 0.00 2.57
5473 6658 9.897744 CAATCGCATTATTATTGACAGGTAAAT 57.102 29.630 0.00 0.00 33.38 1.40
5474 6659 8.898761 ACAATCGCATTATTATTGACAGGTAAA 58.101 29.630 0.00 0.00 35.18 2.01
5475 6660 8.341903 CACAATCGCATTATTATTGACAGGTAA 58.658 33.333 0.00 0.00 35.18 2.85
5476 6661 7.497579 ACACAATCGCATTATTATTGACAGGTA 59.502 33.333 0.00 0.00 35.18 3.08
5477 6662 6.318648 ACACAATCGCATTATTATTGACAGGT 59.681 34.615 0.00 0.00 35.18 4.00
5478 6663 6.728200 ACACAATCGCATTATTATTGACAGG 58.272 36.000 0.00 0.00 35.18 4.00
5479 6664 9.715123 TTTACACAATCGCATTATTATTGACAG 57.285 29.630 0.00 0.00 35.18 3.51
5490 6675 8.978564 TGAACATTTATTTACACAATCGCATT 57.021 26.923 0.00 0.00 0.00 3.56
5491 6676 9.236691 GATGAACATTTATTTACACAATCGCAT 57.763 29.630 0.00 0.00 0.00 4.73
5492 6677 7.427895 CGATGAACATTTATTTACACAATCGCA 59.572 33.333 0.00 0.00 0.00 5.10
5493 6678 7.638295 TCGATGAACATTTATTTACACAATCGC 59.362 33.333 0.00 0.00 0.00 4.58
5494 6679 9.484326 TTCGATGAACATTTATTTACACAATCG 57.516 29.630 0.00 0.00 0.00 3.34
5503 6688 7.910162 CGGTCAGAATTCGATGAACATTTATTT 59.090 33.333 11.90 0.00 32.47 1.40
5504 6689 7.065803 ACGGTCAGAATTCGATGAACATTTATT 59.934 33.333 11.90 0.00 32.47 1.40
5505 6690 6.538742 ACGGTCAGAATTCGATGAACATTTAT 59.461 34.615 11.90 0.00 32.47 1.40
5506 6691 5.872617 ACGGTCAGAATTCGATGAACATTTA 59.127 36.000 11.90 0.00 32.47 1.40
5507 6692 4.695455 ACGGTCAGAATTCGATGAACATTT 59.305 37.500 11.90 0.00 32.47 2.32
5508 6693 4.093408 CACGGTCAGAATTCGATGAACATT 59.907 41.667 11.90 0.00 32.47 2.71
5509 6694 3.618594 CACGGTCAGAATTCGATGAACAT 59.381 43.478 11.90 0.00 32.47 2.71
5510 6695 2.993220 CACGGTCAGAATTCGATGAACA 59.007 45.455 11.90 0.00 32.47 3.18
5511 6696 3.250744 TCACGGTCAGAATTCGATGAAC 58.749 45.455 0.00 1.23 0.00 3.18
5512 6697 3.586100 TCACGGTCAGAATTCGATGAA 57.414 42.857 0.00 0.00 0.00 2.57
5513 6698 3.586100 TTCACGGTCAGAATTCGATGA 57.414 42.857 0.00 0.00 0.00 2.92
5514 6699 4.864916 AATTCACGGTCAGAATTCGATG 57.135 40.909 0.00 0.00 40.63 3.84
5515 6700 4.809426 GGTAATTCACGGTCAGAATTCGAT 59.191 41.667 9.04 0.00 42.82 3.59
5516 6701 4.081862 AGGTAATTCACGGTCAGAATTCGA 60.082 41.667 9.04 0.00 42.82 3.71
5517 6702 4.181578 AGGTAATTCACGGTCAGAATTCG 58.818 43.478 9.04 0.00 42.82 3.34
5518 6703 7.787725 ATAAGGTAATTCACGGTCAGAATTC 57.212 36.000 9.04 0.00 42.82 2.17
5519 6704 9.847224 AATATAAGGTAATTCACGGTCAGAATT 57.153 29.630 10.22 10.22 45.05 2.17
5520 6705 9.847224 AAATATAAGGTAATTCACGGTCAGAAT 57.153 29.630 0.00 0.00 37.30 2.40
5521 6706 9.321562 GAAATATAAGGTAATTCACGGTCAGAA 57.678 33.333 0.00 0.00 0.00 3.02
5522 6707 8.479689 TGAAATATAAGGTAATTCACGGTCAGA 58.520 33.333 0.00 0.00 0.00 3.27
5523 6708 8.657074 TGAAATATAAGGTAATTCACGGTCAG 57.343 34.615 0.00 0.00 0.00 3.51
5524 6709 9.621629 ATTGAAATATAAGGTAATTCACGGTCA 57.378 29.630 0.00 0.00 30.34 4.02
5567 6752 9.264719 CCTTCTGAAGCAATTTCACTTTAATTT 57.735 29.630 11.93 0.00 40.82 1.82
5568 6753 8.424133 ACCTTCTGAAGCAATTTCACTTTAATT 58.576 29.630 11.93 0.00 40.82 1.40
5569 6754 7.955918 ACCTTCTGAAGCAATTTCACTTTAAT 58.044 30.769 11.93 0.00 40.82 1.40
5570 6755 7.346751 ACCTTCTGAAGCAATTTCACTTTAA 57.653 32.000 11.93 0.00 40.82 1.52
5571 6756 6.959639 ACCTTCTGAAGCAATTTCACTTTA 57.040 33.333 11.93 0.00 40.82 1.85
5572 6757 5.859205 ACCTTCTGAAGCAATTTCACTTT 57.141 34.783 11.93 0.00 40.82 2.66
5573 6758 6.547510 ACTTACCTTCTGAAGCAATTTCACTT 59.452 34.615 11.93 0.00 40.82 3.16
5574 6759 6.064717 ACTTACCTTCTGAAGCAATTTCACT 58.935 36.000 11.93 0.00 40.82 3.41
5575 6760 6.319141 ACTTACCTTCTGAAGCAATTTCAC 57.681 37.500 11.93 0.00 40.82 3.18
5576 6761 8.635765 ATTACTTACCTTCTGAAGCAATTTCA 57.364 30.769 11.93 0.00 43.40 2.69
5581 6766 9.569122 ACTTTAATTACTTACCTTCTGAAGCAA 57.431 29.630 11.93 7.11 0.00 3.91
5582 6767 8.999431 CACTTTAATTACTTACCTTCTGAAGCA 58.001 33.333 11.93 0.00 0.00 3.91
5583 6768 9.216117 TCACTTTAATTACTTACCTTCTGAAGC 57.784 33.333 11.93 0.00 0.00 3.86
5613 6798 9.219603 CGTCCAACCTTTCATGTATATGATAAT 57.780 33.333 2.71 0.00 42.60 1.28
5614 6799 8.425703 TCGTCCAACCTTTCATGTATATGATAA 58.574 33.333 2.71 1.07 42.60 1.75
5615 6800 7.958088 TCGTCCAACCTTTCATGTATATGATA 58.042 34.615 2.71 0.00 42.60 2.15
5616 6801 6.826668 TCGTCCAACCTTTCATGTATATGAT 58.173 36.000 2.71 0.00 42.60 2.45
5617 6802 6.228616 TCGTCCAACCTTTCATGTATATGA 57.771 37.500 0.00 0.00 41.44 2.15
5618 6803 6.761242 TCTTCGTCCAACCTTTCATGTATATG 59.239 38.462 0.00 0.00 35.57 1.78
5619 6804 6.884832 TCTTCGTCCAACCTTTCATGTATAT 58.115 36.000 0.00 0.00 0.00 0.86
5620 6805 6.153851 TCTCTTCGTCCAACCTTTCATGTATA 59.846 38.462 0.00 0.00 0.00 1.47
5621 6806 5.046591 TCTCTTCGTCCAACCTTTCATGTAT 60.047 40.000 0.00 0.00 0.00 2.29
5622 6807 4.282449 TCTCTTCGTCCAACCTTTCATGTA 59.718 41.667 0.00 0.00 0.00 2.29
5623 6808 3.071023 TCTCTTCGTCCAACCTTTCATGT 59.929 43.478 0.00 0.00 0.00 3.21
5624 6809 3.664107 TCTCTTCGTCCAACCTTTCATG 58.336 45.455 0.00 0.00 0.00 3.07
5625 6810 4.256920 CATCTCTTCGTCCAACCTTTCAT 58.743 43.478 0.00 0.00 0.00 2.57
5626 6811 3.557054 CCATCTCTTCGTCCAACCTTTCA 60.557 47.826 0.00 0.00 0.00 2.69
5627 6812 3.003480 CCATCTCTTCGTCCAACCTTTC 58.997 50.000 0.00 0.00 0.00 2.62
5628 6813 2.372172 ACCATCTCTTCGTCCAACCTTT 59.628 45.455 0.00 0.00 0.00 3.11
5629 6814 1.978580 ACCATCTCTTCGTCCAACCTT 59.021 47.619 0.00 0.00 0.00 3.50
5630 6815 1.276421 CACCATCTCTTCGTCCAACCT 59.724 52.381 0.00 0.00 0.00 3.50
5631 6816 1.002087 ACACCATCTCTTCGTCCAACC 59.998 52.381 0.00 0.00 0.00 3.77
5632 6817 2.069273 CACACCATCTCTTCGTCCAAC 58.931 52.381 0.00 0.00 0.00 3.77
5633 6818 1.967779 TCACACCATCTCTTCGTCCAA 59.032 47.619 0.00 0.00 0.00 3.53
5634 6819 1.627864 TCACACCATCTCTTCGTCCA 58.372 50.000 0.00 0.00 0.00 4.02
5635 6820 2.231478 TCTTCACACCATCTCTTCGTCC 59.769 50.000 0.00 0.00 0.00 4.79
5636 6821 3.577649 TCTTCACACCATCTCTTCGTC 57.422 47.619 0.00 0.00 0.00 4.20
5637 6822 4.310769 CTTTCTTCACACCATCTCTTCGT 58.689 43.478 0.00 0.00 0.00 3.85
5638 6823 3.681897 CCTTTCTTCACACCATCTCTTCG 59.318 47.826 0.00 0.00 0.00 3.79
5639 6824 4.453819 CACCTTTCTTCACACCATCTCTTC 59.546 45.833 0.00 0.00 0.00 2.87
5640 6825 4.103153 TCACCTTTCTTCACACCATCTCTT 59.897 41.667 0.00 0.00 0.00 2.85
5641 6826 3.648067 TCACCTTTCTTCACACCATCTCT 59.352 43.478 0.00 0.00 0.00 3.10
5642 6827 4.008074 TCACCTTTCTTCACACCATCTC 57.992 45.455 0.00 0.00 0.00 2.75
5643 6828 4.437682 TTCACCTTTCTTCACACCATCT 57.562 40.909 0.00 0.00 0.00 2.90
5644 6829 5.464168 CATTTCACCTTTCTTCACACCATC 58.536 41.667 0.00 0.00 0.00 3.51
5645 6830 4.281688 CCATTTCACCTTTCTTCACACCAT 59.718 41.667 0.00 0.00 0.00 3.55
5646 6831 3.636300 CCATTTCACCTTTCTTCACACCA 59.364 43.478 0.00 0.00 0.00 4.17
5647 6832 3.005791 CCCATTTCACCTTTCTTCACACC 59.994 47.826 0.00 0.00 0.00 4.16
5648 6833 3.888930 TCCCATTTCACCTTTCTTCACAC 59.111 43.478 0.00 0.00 0.00 3.82
5649 6834 4.177537 TCCCATTTCACCTTTCTTCACA 57.822 40.909 0.00 0.00 0.00 3.58
5650 6835 4.340950 TGTTCCCATTTCACCTTTCTTCAC 59.659 41.667 0.00 0.00 0.00 3.18
5651 6836 4.541705 TGTTCCCATTTCACCTTTCTTCA 58.458 39.130 0.00 0.00 0.00 3.02
5652 6837 5.728637 ATGTTCCCATTTCACCTTTCTTC 57.271 39.130 0.00 0.00 0.00 2.87
5653 6838 6.294508 CGTAATGTTCCCATTTCACCTTTCTT 60.295 38.462 0.00 0.00 41.50 2.52
5654 6839 5.183140 CGTAATGTTCCCATTTCACCTTTCT 59.817 40.000 0.00 0.00 41.50 2.52
5655 6840 5.048294 ACGTAATGTTCCCATTTCACCTTTC 60.048 40.000 0.00 0.00 41.50 2.62
5656 6841 4.830600 ACGTAATGTTCCCATTTCACCTTT 59.169 37.500 0.00 0.00 41.50 3.11
5657 6842 4.403734 ACGTAATGTTCCCATTTCACCTT 58.596 39.130 0.00 0.00 41.50 3.50
5658 6843 4.028993 ACGTAATGTTCCCATTTCACCT 57.971 40.909 0.00 0.00 41.50 4.00
5659 6844 4.776795 AACGTAATGTTCCCATTTCACC 57.223 40.909 0.00 0.00 41.50 4.02
5686 6871 9.578576 TCCAGTTCACTTTAACTCTACTACTTA 57.421 33.333 0.00 0.00 37.61 2.24
5687 6872 8.474710 TCCAGTTCACTTTAACTCTACTACTT 57.525 34.615 0.00 0.00 37.61 2.24
5688 6873 8.474710 TTCCAGTTCACTTTAACTCTACTACT 57.525 34.615 0.00 0.00 37.61 2.57
5689 6874 9.538508 TTTTCCAGTTCACTTTAACTCTACTAC 57.461 33.333 0.00 0.00 37.61 2.73
5691 6876 9.628500 AATTTTCCAGTTCACTTTAACTCTACT 57.372 29.630 0.00 0.00 37.61 2.57
5694 6879 7.706607 GCAAATTTTCCAGTTCACTTTAACTCT 59.293 33.333 0.00 0.00 37.61 3.24
5695 6880 7.491048 TGCAAATTTTCCAGTTCACTTTAACTC 59.509 33.333 0.00 0.00 37.61 3.01
5696 6881 7.327214 TGCAAATTTTCCAGTTCACTTTAACT 58.673 30.769 0.00 0.00 40.33 2.24
5697 6882 7.532682 TGCAAATTTTCCAGTTCACTTTAAC 57.467 32.000 0.00 0.00 0.00 2.01
5698 6883 7.440856 GGATGCAAATTTTCCAGTTCACTTTAA 59.559 33.333 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.