Multiple sequence alignment - TraesCS7A01G225700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G225700 chr7A 100.000 2972 0 0 1 2972 195219238 195216267 0.000000e+00 5489.0
1 TraesCS7A01G225700 chr7A 85.381 472 61 6 2506 2972 514889353 514889821 1.600000e-132 483.0
2 TraesCS7A01G225700 chr7B 90.420 1858 83 36 636 2448 333128871 333130678 0.000000e+00 2357.0
3 TraesCS7A01G225700 chr7D 90.698 1720 84 35 833 2513 188873932 188875614 0.000000e+00 2220.0
4 TraesCS7A01G225700 chr7D 79.765 850 87 28 33 837 188829551 188830360 3.370000e-149 538.0
5 TraesCS7A01G225700 chr2A 87.049 471 51 8 2508 2972 203467774 203467308 9.440000e-145 523.0
6 TraesCS7A01G225700 chr6D 86.792 477 50 7 2508 2972 149438841 149438366 1.220000e-143 520.0
7 TraesCS7A01G225700 chr6D 77.699 843 135 42 956 1764 364226907 364227730 1.610000e-127 466.0
8 TraesCS7A01G225700 chr6D 76.271 472 90 14 1262 1731 26351124 26351575 6.410000e-57 231.0
9 TraesCS7A01G225700 chr6D 90.244 41 3 1 200 239 295099014 295098974 5.000000e-03 52.8
10 TraesCS7A01G225700 chr1A 86.765 476 51 9 2508 2971 171036495 171036020 1.220000e-143 520.0
11 TraesCS7A01G225700 chr1A 85.773 485 52 9 2501 2972 282692254 282692734 5.720000e-137 497.0
12 TraesCS7A01G225700 chr3B 86.611 478 50 5 2508 2972 179131122 179130646 1.580000e-142 516.0
13 TraesCS7A01G225700 chr6B 77.925 829 126 47 956 1748 549193280 549194087 5.800000e-127 464.0
14 TraesCS7A01G225700 chr6B 76.059 472 91 15 1262 1731 48552037 48552488 2.980000e-55 226.0
15 TraesCS7A01G225700 chr2D 84.760 479 56 11 2508 2972 506939330 506939805 5.800000e-127 464.0
16 TraesCS7A01G225700 chr1B 84.567 473 63 5 2508 2972 520370939 520370469 7.510000e-126 460.0
17 TraesCS7A01G225700 chr6A 76.172 1024 155 67 956 1930 505247775 505246792 9.710000e-125 457.0
18 TraesCS7A01G225700 chr4B 84.394 487 50 15 2508 2972 644277311 644276829 3.490000e-124 455.0
19 TraesCS7A01G225700 chr4B 81.200 250 44 3 1265 1511 653583 653334 6.500000e-47 198.0
20 TraesCS7A01G225700 chr1D 76.056 497 97 15 1234 1728 22863605 22864081 3.830000e-59 239.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G225700 chr7A 195216267 195219238 2971 True 5489 5489 100.000 1 2972 1 chr7A.!!$R1 2971
1 TraesCS7A01G225700 chr7B 333128871 333130678 1807 False 2357 2357 90.420 636 2448 1 chr7B.!!$F1 1812
2 TraesCS7A01G225700 chr7D 188873932 188875614 1682 False 2220 2220 90.698 833 2513 1 chr7D.!!$F2 1680
3 TraesCS7A01G225700 chr7D 188829551 188830360 809 False 538 538 79.765 33 837 1 chr7D.!!$F1 804
4 TraesCS7A01G225700 chr6D 364226907 364227730 823 False 466 466 77.699 956 1764 1 chr6D.!!$F2 808
5 TraesCS7A01G225700 chr6B 549193280 549194087 807 False 464 464 77.925 956 1748 1 chr6B.!!$F2 792
6 TraesCS7A01G225700 chr6A 505246792 505247775 983 True 457 457 76.172 956 1930 1 chr6A.!!$R1 974

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 375 0.035056 CGAATCAGGGGCTTTCTGGT 60.035 55.0 0.0 0.0 33.36 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2315 2453 0.179073 AAGGCCACGGATTCGAGATG 60.179 55.0 5.01 0.0 40.11 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.521947 AACCTAATTCTCTTCGTCGGG 57.478 47.619 0.00 0.00 0.00 5.14
24 25 1.136500 ACCTAATTCTCTTCGTCGGGC 59.864 52.381 0.00 0.00 0.00 6.13
25 26 1.136305 CCTAATTCTCTTCGTCGGGCA 59.864 52.381 0.00 0.00 0.00 5.36
26 27 2.194271 CTAATTCTCTTCGTCGGGCAC 58.806 52.381 0.00 0.00 0.00 5.01
37 38 4.508128 CGGGCACGACGGTAGCAT 62.508 66.667 0.00 0.00 44.60 3.79
40 41 2.165301 GGCACGACGGTAGCATGAC 61.165 63.158 0.00 0.00 0.00 3.06
43 44 2.278596 CGACGGTAGCATGACGGG 60.279 66.667 0.00 0.00 0.00 5.28
60 61 1.318380 GGGGGAGGAGATTGAGGGA 59.682 63.158 0.00 0.00 0.00 4.20
62 63 1.135960 GGGGAGGAGATTGAGGGAAG 58.864 60.000 0.00 0.00 0.00 3.46
65 66 1.626631 GGAGGAGATTGAGGGAAGGGT 60.627 57.143 0.00 0.00 0.00 4.34
70 71 1.151361 ATTGAGGGAAGGGTGGGGT 60.151 57.895 0.00 0.00 0.00 4.95
82 83 2.933287 TGGGGTGACAAGGCCGAT 60.933 61.111 0.00 0.00 0.00 4.18
85 86 3.499737 GGTGACAAGGCCGATGCG 61.500 66.667 11.05 0.00 38.85 4.73
123 124 1.327690 GGTGGTAGTGATCCAGCCGA 61.328 60.000 3.19 0.00 44.60 5.54
156 157 6.476378 TCAATAGTTGGGGAAGAAGAAGAAG 58.524 40.000 0.00 0.00 0.00 2.85
158 159 2.163509 GTTGGGGAAGAAGAAGAAGGC 58.836 52.381 0.00 0.00 0.00 4.35
160 161 0.613777 GGGGAAGAAGAAGAAGGCGA 59.386 55.000 0.00 0.00 0.00 5.54
184 185 2.163211 GCTGGAGGTTGAAGAAGCAATC 59.837 50.000 0.00 0.00 31.56 2.67
195 224 2.966050 AGAAGCAATCTCGACAAGTCC 58.034 47.619 0.00 0.00 30.46 3.85
215 244 5.543790 AGTCCACTGCCCAAATAGAATTTTT 59.456 36.000 0.00 0.00 0.00 1.94
222 251 6.848451 TGCCCAAATAGAATTTTTAGTCGAC 58.152 36.000 7.70 7.70 0.00 4.20
233 262 4.725790 TTTTAGTCGACTTACCCCTAGC 57.274 45.455 25.44 0.00 0.00 3.42
244 273 2.296943 ACCCCTAGCCAATCCCTTAA 57.703 50.000 0.00 0.00 0.00 1.85
255 285 4.580580 GCCAATCCCTTAACAATCTACAGG 59.419 45.833 0.00 0.00 0.00 4.00
258 288 4.487714 TCCCTTAACAATCTACAGGCTG 57.512 45.455 14.16 14.16 0.00 4.85
270 300 0.825010 ACAGGCTGCACTTTCAAGGG 60.825 55.000 15.89 0.00 0.00 3.95
280 310 1.988107 ACTTTCAAGGGCTCATCCTCA 59.012 47.619 0.00 0.00 35.80 3.86
286 316 1.075601 AGGGCTCATCCTCAACCAAA 58.924 50.000 0.00 0.00 29.56 3.28
289 319 3.464833 AGGGCTCATCCTCAACCAAATAT 59.535 43.478 0.00 0.00 29.56 1.28
293 323 5.127682 GGCTCATCCTCAACCAAATATGTTT 59.872 40.000 0.00 0.00 0.00 2.83
295 325 7.196331 GCTCATCCTCAACCAAATATGTTTAC 58.804 38.462 0.00 0.00 0.00 2.01
300 330 8.106247 TCCTCAACCAAATATGTTTACTGTTC 57.894 34.615 0.00 0.00 0.00 3.18
302 332 8.522830 CCTCAACCAAATATGTTTACTGTTCAT 58.477 33.333 0.00 0.00 0.00 2.57
304 334 9.072375 TCAACCAAATATGTTTACTGTTCATGA 57.928 29.630 0.00 0.00 0.00 3.07
305 335 9.859427 CAACCAAATATGTTTACTGTTCATGAT 57.141 29.630 0.00 0.00 0.00 2.45
334 366 2.796734 TTTTGGGGGCGAATCAGGGG 62.797 60.000 0.00 0.00 0.00 4.79
337 369 4.129148 GGGGCGAATCAGGGGCTT 62.129 66.667 0.00 0.00 0.00 4.35
343 375 0.035056 CGAATCAGGGGCTTTCTGGT 60.035 55.000 0.00 0.00 33.36 4.00
354 386 3.634910 GGGCTTTCTGGTACTTTTGTCAA 59.365 43.478 0.00 0.00 0.00 3.18
364 396 9.349713 TCTGGTACTTTTGTCAATAATCAAGTT 57.650 29.630 5.21 0.00 0.00 2.66
365 397 9.612620 CTGGTACTTTTGTCAATAATCAAGTTC 57.387 33.333 5.21 1.54 0.00 3.01
379 411 4.380841 TCAAGTTCGTGTACAAGTGACT 57.619 40.909 8.68 10.72 0.00 3.41
387 419 8.086522 AGTTCGTGTACAAGTGACTATGTTAAT 58.913 33.333 14.78 0.00 0.00 1.40
415 447 8.220755 TCTAGTTTAATTGCAGTGTCTTTGTT 57.779 30.769 0.00 0.00 0.00 2.83
427 459 2.951642 TGTCTTTGTTGAAGGCTTGAGG 59.048 45.455 3.46 0.00 40.69 3.86
434 466 4.473444 TGTTGAAGGCTTGAGGAGATTTT 58.527 39.130 3.46 0.00 0.00 1.82
440 472 6.375455 TGAAGGCTTGAGGAGATTTTGTATTC 59.625 38.462 3.46 0.00 0.00 1.75
467 499 9.982291 CAAAAATTATTTCCAAGAAGATGCATG 57.018 29.630 2.46 0.00 0.00 4.06
470 502 3.861276 TTTCCAAGAAGATGCATGCAG 57.139 42.857 26.69 10.16 0.00 4.41
478 510 4.279145 AGAAGATGCATGCAGGAGATTTT 58.721 39.130 26.69 10.06 0.00 1.82
479 511 5.443283 AGAAGATGCATGCAGGAGATTTTA 58.557 37.500 26.69 0.00 0.00 1.52
480 512 6.069331 AGAAGATGCATGCAGGAGATTTTAT 58.931 36.000 26.69 4.49 0.00 1.40
481 513 6.550108 AGAAGATGCATGCAGGAGATTTTATT 59.450 34.615 26.69 9.83 0.00 1.40
482 514 6.085555 AGATGCATGCAGGAGATTTTATTG 57.914 37.500 26.69 0.00 0.00 1.90
520 552 8.766000 TGAGAAATTATTTTGTACACGCTCTA 57.234 30.769 0.00 0.00 0.00 2.43
521 553 9.378551 TGAGAAATTATTTTGTACACGCTCTAT 57.621 29.630 0.00 0.00 0.00 1.98
528 560 9.642327 TTATTTTGTACACGCTCTATTCACTAA 57.358 29.630 0.00 0.00 0.00 2.24
560 597 9.559958 GACATTTGACAAACCATCTTACATTAG 57.440 33.333 1.94 0.00 0.00 1.73
565 602 8.094798 TGACAAACCATCTTACATTAGTGAAC 57.905 34.615 0.00 0.00 0.00 3.18
569 606 8.446273 CAAACCATCTTACATTAGTGAACAGAG 58.554 37.037 0.00 0.00 0.00 3.35
570 607 6.109359 ACCATCTTACATTAGTGAACAGAGC 58.891 40.000 0.00 0.00 0.00 4.09
575 612 8.803397 TCTTACATTAGTGAACAGAGCTAGTA 57.197 34.615 0.00 0.00 0.00 1.82
577 614 8.577048 TTACATTAGTGAACAGAGCTAGTAGT 57.423 34.615 0.00 0.00 0.00 2.73
578 615 7.469537 ACATTAGTGAACAGAGCTAGTAGTT 57.530 36.000 0.00 0.00 0.00 2.24
579 616 7.897864 ACATTAGTGAACAGAGCTAGTAGTTT 58.102 34.615 0.00 0.00 0.00 2.66
580 617 8.368668 ACATTAGTGAACAGAGCTAGTAGTTTT 58.631 33.333 0.00 0.00 0.00 2.43
581 618 9.209175 CATTAGTGAACAGAGCTAGTAGTTTTT 57.791 33.333 0.00 0.00 0.00 1.94
617 654 5.710099 TCTTCGATCCAAAGCATTTTACCTT 59.290 36.000 0.00 0.00 35.03 3.50
618 655 6.882140 TCTTCGATCCAAAGCATTTTACCTTA 59.118 34.615 0.00 0.00 35.03 2.69
619 656 7.392113 TCTTCGATCCAAAGCATTTTACCTTAA 59.608 33.333 0.00 0.00 35.03 1.85
620 657 7.639113 TCGATCCAAAGCATTTTACCTTAAT 57.361 32.000 0.00 0.00 35.03 1.40
621 658 7.479980 TCGATCCAAAGCATTTTACCTTAATG 58.520 34.615 0.00 0.00 35.03 1.90
622 659 6.697019 CGATCCAAAGCATTTTACCTTAATGG 59.303 38.462 0.00 0.00 35.03 3.16
623 660 6.926630 TCCAAAGCATTTTACCTTAATGGT 57.073 33.333 0.00 0.00 44.93 3.55
758 799 1.139163 CTTGGCATTTTGTTGTCGGC 58.861 50.000 0.00 0.00 0.00 5.54
829 870 3.312828 CTGGTCTAGCGCTGAATATGTC 58.687 50.000 22.90 2.58 0.00 3.06
831 872 2.297597 GGTCTAGCGCTGAATATGTCCT 59.702 50.000 22.90 0.00 0.00 3.85
832 873 3.570559 GTCTAGCGCTGAATATGTCCTC 58.429 50.000 22.90 0.00 0.00 3.71
833 874 3.004839 GTCTAGCGCTGAATATGTCCTCA 59.995 47.826 22.90 0.00 0.00 3.86
834 875 3.829026 TCTAGCGCTGAATATGTCCTCAT 59.171 43.478 22.90 0.00 38.00 2.90
835 876 3.037431 AGCGCTGAATATGTCCTCATC 57.963 47.619 10.39 0.00 35.70 2.92
836 877 1.723542 GCGCTGAATATGTCCTCATCG 59.276 52.381 0.00 0.00 35.03 3.84
838 879 2.288457 CGCTGAATATGTCCTCATCGGT 60.288 50.000 0.00 0.00 35.70 4.69
844 887 1.267574 ATGTCCTCATCGGTGCCACT 61.268 55.000 0.00 0.00 0.00 4.00
1551 1664 0.453793 AGTTCGAGATCCTGTCGCTG 59.546 55.000 0.00 0.00 37.35 5.18
1722 1835 3.580193 GCCGTCTACGAGCGCCTA 61.580 66.667 2.29 0.00 43.02 3.93
1949 2065 1.296715 CCGGAGACAACTTGGGGAG 59.703 63.158 0.00 0.00 0.00 4.30
1978 2094 0.379669 CGTCAGGCCATGATTGCTTC 59.620 55.000 5.01 0.00 40.92 3.86
1982 2098 0.749454 AGGCCATGATTGCTTCGACC 60.749 55.000 5.01 0.00 0.00 4.79
1983 2099 1.031571 GGCCATGATTGCTTCGACCA 61.032 55.000 0.00 0.00 0.00 4.02
1989 2105 3.333029 TGATTGCTTCGACCATCTTCA 57.667 42.857 0.00 0.00 0.00 3.02
2000 2116 1.072331 ACCATCTTCAAGCAAGGTCGT 59.928 47.619 0.00 0.00 32.22 4.34
2003 2119 2.910688 TCTTCAAGCAAGGTCGTTCT 57.089 45.000 0.00 0.00 32.22 3.01
2062 2178 3.484229 CGAAGAAACTGCAATCGATCACC 60.484 47.826 0.00 0.00 35.65 4.02
2135 2251 2.917701 TTTGTGGAGTATGCAATGCG 57.082 45.000 0.00 0.00 39.09 4.73
2151 2267 4.267452 GCAATGCGTGTAAAATTATGGGTG 59.733 41.667 0.00 0.00 0.00 4.61
2155 2271 4.519350 TGCGTGTAAAATTATGGGTGAACA 59.481 37.500 0.00 0.00 0.00 3.18
2212 2350 3.486542 GCTCATGTCGGAAAAATCTCAGC 60.487 47.826 0.00 0.00 0.00 4.26
2263 2401 6.264292 TCAACAAGAATCCGGAAGAATGAAAA 59.736 34.615 9.01 0.00 0.00 2.29
2269 2407 6.374613 AGAATCCGGAAGAATGAAAAGGTTAC 59.625 38.462 9.01 0.00 0.00 2.50
2272 2410 4.142966 CCGGAAGAATGAAAAGGTTACGTC 60.143 45.833 0.00 0.00 0.00 4.34
2279 2417 3.319755 TGAAAAGGTTACGTCGATGTCC 58.680 45.455 14.83 10.49 0.00 4.02
2280 2418 2.375173 AAAGGTTACGTCGATGTCCC 57.625 50.000 14.83 15.14 0.00 4.46
2281 2419 0.171903 AAGGTTACGTCGATGTCCCG 59.828 55.000 14.83 1.56 0.00 5.14
2282 2420 0.962356 AGGTTACGTCGATGTCCCGT 60.962 55.000 14.83 8.48 38.53 5.28
2283 2421 0.109132 GGTTACGTCGATGTCCCGTT 60.109 55.000 14.83 0.00 36.12 4.44
2284 2422 1.262882 GTTACGTCGATGTCCCGTTC 58.737 55.000 14.83 0.00 36.12 3.95
2285 2423 1.135575 GTTACGTCGATGTCCCGTTCT 60.136 52.381 14.83 0.00 36.12 3.01
2286 2424 1.167851 TACGTCGATGTCCCGTTCTT 58.832 50.000 14.83 0.00 36.12 2.52
2287 2425 0.316204 ACGTCGATGTCCCGTTCTTT 59.684 50.000 3.92 0.00 0.00 2.52
2288 2426 0.989890 CGTCGATGTCCCGTTCTTTC 59.010 55.000 0.00 0.00 0.00 2.62
2289 2427 1.402456 CGTCGATGTCCCGTTCTTTCT 60.402 52.381 0.00 0.00 0.00 2.52
2290 2428 2.685100 GTCGATGTCCCGTTCTTTCTT 58.315 47.619 0.00 0.00 0.00 2.52
2315 2453 6.544564 TCCGGGTTCATCCTGTAATATTTTTC 59.455 38.462 0.00 0.00 40.86 2.29
2405 2543 5.163281 TCTCAGTTCGACCTTCTACTAGT 57.837 43.478 0.00 0.00 0.00 2.57
2406 2544 6.291648 TCTCAGTTCGACCTTCTACTAGTA 57.708 41.667 1.89 1.89 0.00 1.82
2407 2545 6.105333 TCTCAGTTCGACCTTCTACTAGTAC 58.895 44.000 0.00 0.00 0.00 2.73
2411 2549 6.257630 CAGTTCGACCTTCTACTAGTACTACC 59.742 46.154 0.00 0.00 0.00 3.18
2435 2573 6.116126 CCCTCCCACAACAATTTAACAAAAA 58.884 36.000 0.00 0.00 0.00 1.94
2448 2586 9.171701 CAATTTAACAAAAATGAAAGCATGGTG 57.828 29.630 0.00 0.00 34.26 4.17
2450 2588 8.674263 TTTAACAAAAATGAAAGCATGGTGAT 57.326 26.923 0.00 0.00 34.26 3.06
2451 2589 6.790285 AACAAAAATGAAAGCATGGTGATC 57.210 33.333 0.00 0.76 34.26 2.92
2454 2592 3.770263 AATGAAAGCATGGTGATCACG 57.230 42.857 19.33 7.28 34.26 4.35
2456 2594 0.804364 GAAAGCATGGTGATCACGCA 59.196 50.000 21.36 18.82 0.00 5.24
2487 2637 2.946990 GTCTTCCGGTCTTTGTTTTCCA 59.053 45.455 0.00 0.00 0.00 3.53
2488 2638 3.379057 GTCTTCCGGTCTTTGTTTTCCAA 59.621 43.478 0.00 0.00 0.00 3.53
2504 2654 2.861274 TCCAATGCATGTGTCACTTGA 58.139 42.857 20.02 7.87 0.00 3.02
2508 2658 4.412207 CAATGCATGTGTCACTTGATCAG 58.588 43.478 20.02 5.55 0.00 2.90
2513 2663 3.836365 TGTGTCACTTGATCAGGACAA 57.164 42.857 21.21 12.83 41.45 3.18
2514 2664 3.466836 TGTGTCACTTGATCAGGACAAC 58.533 45.455 21.21 16.83 41.45 3.32
2515 2665 3.134623 TGTGTCACTTGATCAGGACAACT 59.865 43.478 21.21 0.00 41.45 3.16
2516 2666 3.743396 GTGTCACTTGATCAGGACAACTC 59.257 47.826 21.21 10.83 41.45 3.01
2517 2667 3.244215 TGTCACTTGATCAGGACAACTCC 60.244 47.826 18.75 0.66 37.33 3.85
2518 2668 2.972021 TCACTTGATCAGGACAACTCCA 59.028 45.455 12.40 0.00 39.39 3.86
2519 2669 3.070018 CACTTGATCAGGACAACTCCAC 58.930 50.000 12.40 0.00 39.39 4.02
2520 2670 2.039084 ACTTGATCAGGACAACTCCACC 59.961 50.000 12.40 0.00 39.39 4.61
2521 2671 0.608130 TGATCAGGACAACTCCACCG 59.392 55.000 0.00 0.00 39.39 4.94
2522 2672 0.608640 GATCAGGACAACTCCACCGT 59.391 55.000 0.00 0.00 39.39 4.83
2523 2673 0.321671 ATCAGGACAACTCCACCGTG 59.678 55.000 0.00 0.00 39.39 4.94
2524 2674 1.961277 CAGGACAACTCCACCGTGC 60.961 63.158 0.00 0.00 39.39 5.34
2525 2675 2.110213 GGACAACTCCACCGTGCA 59.890 61.111 0.00 0.00 36.42 4.57
2526 2676 1.525077 GGACAACTCCACCGTGCAA 60.525 57.895 0.00 0.00 36.42 4.08
2527 2677 1.647084 GACAACTCCACCGTGCAAC 59.353 57.895 0.00 0.00 0.00 4.17
2528 2678 1.782028 GACAACTCCACCGTGCAACC 61.782 60.000 0.00 0.00 0.00 3.77
2529 2679 2.203294 AACTCCACCGTGCAACCC 60.203 61.111 0.00 0.00 0.00 4.11
2530 2680 3.050354 AACTCCACCGTGCAACCCA 62.050 57.895 0.00 0.00 0.00 4.51
2531 2681 2.034066 CTCCACCGTGCAACCCAT 59.966 61.111 0.00 0.00 0.00 4.00
2532 2682 1.603455 CTCCACCGTGCAACCCATT 60.603 57.895 0.00 0.00 0.00 3.16
2533 2683 1.586154 CTCCACCGTGCAACCCATTC 61.586 60.000 0.00 0.00 0.00 2.67
2534 2684 1.603455 CCACCGTGCAACCCATTCT 60.603 57.895 0.00 0.00 0.00 2.40
2535 2685 1.580942 CACCGTGCAACCCATTCTG 59.419 57.895 0.00 0.00 0.00 3.02
2536 2686 1.150536 ACCGTGCAACCCATTCTGT 59.849 52.632 0.00 0.00 0.00 3.41
2537 2687 0.889186 ACCGTGCAACCCATTCTGTC 60.889 55.000 0.00 0.00 0.00 3.51
2538 2688 1.586154 CCGTGCAACCCATTCTGTCC 61.586 60.000 0.00 0.00 0.00 4.02
2539 2689 1.875963 GTGCAACCCATTCTGTCCG 59.124 57.895 0.00 0.00 0.00 4.79
2540 2690 1.303236 TGCAACCCATTCTGTCCGG 60.303 57.895 0.00 0.00 0.00 5.14
2541 2691 2.700773 GCAACCCATTCTGTCCGGC 61.701 63.158 0.00 0.00 0.00 6.13
2542 2692 2.046285 CAACCCATTCTGTCCGGCC 61.046 63.158 0.00 0.00 0.00 6.13
2543 2693 3.282374 AACCCATTCTGTCCGGCCC 62.282 63.158 0.00 0.00 0.00 5.80
2544 2694 4.506255 CCCATTCTGTCCGGCCCC 62.506 72.222 0.00 0.00 0.00 5.80
2545 2695 4.856801 CCATTCTGTCCGGCCCCG 62.857 72.222 0.00 0.00 39.44 5.73
2546 2696 4.096003 CATTCTGTCCGGCCCCGT 62.096 66.667 5.93 0.00 37.81 5.28
2547 2697 3.782443 ATTCTGTCCGGCCCCGTC 61.782 66.667 5.93 0.00 37.81 4.79
2557 2707 4.019312 GCCCCGTCCGTTTGGGTA 62.019 66.667 0.00 0.00 44.44 3.69
2558 2708 2.749016 CCCCGTCCGTTTGGGTAA 59.251 61.111 2.83 0.00 44.44 2.85
2559 2709 1.072852 CCCCGTCCGTTTGGGTAAA 59.927 57.895 2.83 0.00 44.44 2.01
2560 2710 0.536915 CCCCGTCCGTTTGGGTAAAA 60.537 55.000 2.83 0.00 44.44 1.52
2561 2711 0.592637 CCCGTCCGTTTGGGTAAAAC 59.407 55.000 0.00 0.00 44.04 2.43
2570 2720 4.741845 GTTTGGGTAAAACGAACAAACG 57.258 40.909 0.00 0.00 40.68 3.60
2571 2721 4.410448 GTTTGGGTAAAACGAACAAACGA 58.590 39.130 0.00 0.00 40.68 3.85
2572 2722 3.948196 TGGGTAAAACGAACAAACGAG 57.052 42.857 0.00 0.00 37.03 4.18
2573 2723 2.613133 TGGGTAAAACGAACAAACGAGG 59.387 45.455 0.00 0.00 37.03 4.63
2574 2724 2.602933 GGGTAAAACGAACAAACGAGGC 60.603 50.000 0.00 0.00 37.03 4.70
2575 2725 2.031930 GGTAAAACGAACAAACGAGGCA 59.968 45.455 0.00 0.00 37.03 4.75
2576 2726 2.468532 AAAACGAACAAACGAGGCAG 57.531 45.000 0.00 0.00 37.03 4.85
2577 2727 0.028902 AAACGAACAAACGAGGCAGC 59.971 50.000 0.00 0.00 37.03 5.25
2578 2728 1.782028 AACGAACAAACGAGGCAGCC 61.782 55.000 1.84 1.84 37.03 4.85
2579 2729 2.954611 GAACAAACGAGGCAGCCC 59.045 61.111 8.22 0.00 0.00 5.19
2580 2730 1.896660 GAACAAACGAGGCAGCCCA 60.897 57.895 8.22 0.00 0.00 5.36
2581 2731 1.452145 GAACAAACGAGGCAGCCCAA 61.452 55.000 8.22 0.00 0.00 4.12
2582 2732 1.734388 AACAAACGAGGCAGCCCAAC 61.734 55.000 8.22 0.00 0.00 3.77
2583 2733 2.978010 AAACGAGGCAGCCCAACG 60.978 61.111 8.22 14.41 38.48 4.10
2601 2751 3.770040 CGTGACGGCCCAGATCCA 61.770 66.667 0.00 0.00 0.00 3.41
2602 2752 2.911143 GTGACGGCCCAGATCCAT 59.089 61.111 0.00 0.00 0.00 3.41
2603 2753 1.227674 GTGACGGCCCAGATCCATC 60.228 63.158 0.00 0.00 0.00 3.51
2604 2754 1.383109 TGACGGCCCAGATCCATCT 60.383 57.895 0.00 0.00 37.72 2.90
2617 2767 4.542662 GATCCATCTGATCCGTTTTGTG 57.457 45.455 0.00 0.00 43.53 3.33
2618 2768 3.417069 TCCATCTGATCCGTTTTGTGT 57.583 42.857 0.00 0.00 0.00 3.72
2619 2769 3.334691 TCCATCTGATCCGTTTTGTGTC 58.665 45.455 0.00 0.00 0.00 3.67
2620 2770 2.420022 CCATCTGATCCGTTTTGTGTCC 59.580 50.000 0.00 0.00 0.00 4.02
2621 2771 1.790755 TCTGATCCGTTTTGTGTCCG 58.209 50.000 0.00 0.00 0.00 4.79
2622 2772 0.796312 CTGATCCGTTTTGTGTCCGG 59.204 55.000 0.00 0.00 43.03 5.14
2623 2773 0.604243 TGATCCGTTTTGTGTCCGGG 60.604 55.000 0.00 0.00 41.98 5.73
2624 2774 1.918868 GATCCGTTTTGTGTCCGGGC 61.919 60.000 0.00 0.00 41.98 6.13
2625 2775 3.666253 CCGTTTTGTGTCCGGGCC 61.666 66.667 2.12 0.00 38.09 5.80
2626 2776 4.020378 CGTTTTGTGTCCGGGCCG 62.020 66.667 21.46 21.46 0.00 6.13
2627 2777 2.592287 GTTTTGTGTCCGGGCCGA 60.592 61.111 30.79 11.12 0.00 5.54
2628 2778 2.592287 TTTTGTGTCCGGGCCGAC 60.592 61.111 30.79 22.88 0.00 4.79
2629 2779 4.629523 TTTGTGTCCGGGCCGACC 62.630 66.667 30.79 17.72 31.35 4.79
2639 2789 2.885113 GGCCGACCCATTTTGAGC 59.115 61.111 0.00 0.00 0.00 4.26
2640 2790 2.485122 GCCGACCCATTTTGAGCG 59.515 61.111 0.00 0.00 0.00 5.03
2641 2791 2.485122 CCGACCCATTTTGAGCGC 59.515 61.111 0.00 0.00 0.00 5.92
2642 2792 2.331893 CCGACCCATTTTGAGCGCA 61.332 57.895 11.47 0.00 0.00 6.09
2643 2793 1.656818 CCGACCCATTTTGAGCGCAT 61.657 55.000 11.47 0.00 0.00 4.73
2644 2794 0.248215 CGACCCATTTTGAGCGCATC 60.248 55.000 11.47 4.91 0.00 3.91
2645 2795 1.098050 GACCCATTTTGAGCGCATCT 58.902 50.000 11.47 0.00 0.00 2.90
2646 2796 1.474077 GACCCATTTTGAGCGCATCTT 59.526 47.619 11.47 0.00 0.00 2.40
2647 2797 1.895131 ACCCATTTTGAGCGCATCTTT 59.105 42.857 11.47 0.00 0.00 2.52
2648 2798 2.264813 CCCATTTTGAGCGCATCTTTG 58.735 47.619 11.47 0.00 0.00 2.77
2649 2799 2.353011 CCCATTTTGAGCGCATCTTTGT 60.353 45.455 11.47 0.00 0.00 2.83
2650 2800 2.664568 CCATTTTGAGCGCATCTTTGTG 59.335 45.455 11.47 0.00 36.41 3.33
2651 2801 3.311106 CATTTTGAGCGCATCTTTGTGT 58.689 40.909 11.47 0.00 35.72 3.72
2652 2802 2.686558 TTTGAGCGCATCTTTGTGTC 57.313 45.000 11.47 0.00 35.72 3.67
2653 2803 0.512518 TTGAGCGCATCTTTGTGTCG 59.487 50.000 11.47 0.00 35.72 4.35
2654 2804 1.291184 TGAGCGCATCTTTGTGTCGG 61.291 55.000 11.47 0.00 35.72 4.79
2655 2805 1.970917 GAGCGCATCTTTGTGTCGGG 61.971 60.000 11.47 0.00 35.72 5.14
2656 2806 2.325082 GCGCATCTTTGTGTCGGGT 61.325 57.895 0.30 0.00 35.72 5.28
2657 2807 1.852067 GCGCATCTTTGTGTCGGGTT 61.852 55.000 0.30 0.00 35.72 4.11
2658 2808 0.591170 CGCATCTTTGTGTCGGGTTT 59.409 50.000 0.00 0.00 0.00 3.27
2659 2809 1.662876 CGCATCTTTGTGTCGGGTTTG 60.663 52.381 0.00 0.00 0.00 2.93
2660 2810 1.335872 GCATCTTTGTGTCGGGTTTGG 60.336 52.381 0.00 0.00 0.00 3.28
2661 2811 2.226330 CATCTTTGTGTCGGGTTTGGA 58.774 47.619 0.00 0.00 0.00 3.53
2662 2812 2.649531 TCTTTGTGTCGGGTTTGGAT 57.350 45.000 0.00 0.00 0.00 3.41
2663 2813 2.500229 TCTTTGTGTCGGGTTTGGATC 58.500 47.619 0.00 0.00 0.00 3.36
2664 2814 1.196808 CTTTGTGTCGGGTTTGGATCG 59.803 52.381 0.00 0.00 0.00 3.69
2665 2815 1.231958 TTGTGTCGGGTTTGGATCGC 61.232 55.000 0.00 0.00 0.00 4.58
2666 2816 2.046700 TGTCGGGTTTGGATCGCC 60.047 61.111 0.00 0.00 0.00 5.54
2667 2817 2.046700 GTCGGGTTTGGATCGCCA 60.047 61.111 0.00 0.00 44.17 5.69
2668 2818 2.046700 TCGGGTTTGGATCGCCAC 60.047 61.111 0.00 0.00 45.94 5.01
2669 2819 3.496131 CGGGTTTGGATCGCCACG 61.496 66.667 0.00 0.00 45.94 4.94
2670 2820 3.131478 GGGTTTGGATCGCCACGG 61.131 66.667 0.00 0.00 45.94 4.94
2671 2821 2.046700 GGTTTGGATCGCCACGGA 60.047 61.111 0.00 0.00 45.94 4.69
2672 2822 1.451387 GGTTTGGATCGCCACGGAT 60.451 57.895 0.00 0.00 45.94 4.18
2673 2823 0.179067 GGTTTGGATCGCCACGGATA 60.179 55.000 0.00 0.00 45.94 2.59
2674 2824 0.935196 GTTTGGATCGCCACGGATAC 59.065 55.000 0.00 0.00 45.94 2.24
2675 2825 0.179067 TTTGGATCGCCACGGATACC 60.179 55.000 0.00 0.00 45.94 2.73
2686 2836 2.653130 GGATACCGAACGGACGCG 60.653 66.667 20.14 3.53 38.96 6.01
2687 2837 3.317795 GATACCGAACGGACGCGC 61.318 66.667 20.14 0.00 38.96 6.86
2688 2838 4.860261 ATACCGAACGGACGCGCC 62.860 66.667 20.14 7.90 38.96 6.53
2722 2872 3.858225 GGGCGGCCACCTACCTAC 61.858 72.222 25.33 0.00 0.00 3.18
2723 2873 3.858225 GGCGGCCACCTACCTACC 61.858 72.222 15.62 0.00 0.00 3.18
2724 2874 3.078836 GCGGCCACCTACCTACCA 61.079 66.667 2.24 0.00 0.00 3.25
2725 2875 2.440817 GCGGCCACCTACCTACCAT 61.441 63.158 2.24 0.00 0.00 3.55
2726 2876 1.746517 CGGCCACCTACCTACCATC 59.253 63.158 2.24 0.00 0.00 3.51
2727 2877 1.755393 CGGCCACCTACCTACCATCC 61.755 65.000 2.24 0.00 0.00 3.51
2728 2878 1.746517 GCCACCTACCTACCATCCG 59.253 63.158 0.00 0.00 0.00 4.18
2729 2879 1.746517 CCACCTACCTACCATCCGC 59.253 63.158 0.00 0.00 0.00 5.54
2730 2880 1.746517 CACCTACCTACCATCCGCC 59.253 63.158 0.00 0.00 0.00 6.13
2731 2881 1.046472 CACCTACCTACCATCCGCCA 61.046 60.000 0.00 0.00 0.00 5.69
2732 2882 0.325860 ACCTACCTACCATCCGCCAA 60.326 55.000 0.00 0.00 0.00 4.52
2733 2883 0.106149 CCTACCTACCATCCGCCAAC 59.894 60.000 0.00 0.00 0.00 3.77
2734 2884 0.828022 CTACCTACCATCCGCCAACA 59.172 55.000 0.00 0.00 0.00 3.33
2735 2885 1.416401 CTACCTACCATCCGCCAACAT 59.584 52.381 0.00 0.00 0.00 2.71
2736 2886 0.180406 ACCTACCATCCGCCAACATC 59.820 55.000 0.00 0.00 0.00 3.06
2737 2887 0.180171 CCTACCATCCGCCAACATCA 59.820 55.000 0.00 0.00 0.00 3.07
2738 2888 1.408127 CCTACCATCCGCCAACATCAA 60.408 52.381 0.00 0.00 0.00 2.57
2739 2889 2.575532 CTACCATCCGCCAACATCAAT 58.424 47.619 0.00 0.00 0.00 2.57
2740 2890 1.105457 ACCATCCGCCAACATCAATG 58.895 50.000 0.00 0.00 0.00 2.82
2741 2891 0.249155 CCATCCGCCAACATCAATGC 60.249 55.000 0.00 0.00 0.00 3.56
2742 2892 0.593008 CATCCGCCAACATCAATGCG 60.593 55.000 0.00 0.00 46.14 4.73
2743 2893 2.340453 ATCCGCCAACATCAATGCGC 62.340 55.000 0.00 0.00 45.28 6.09
2744 2894 2.178769 CGCCAACATCAATGCGCA 59.821 55.556 14.96 14.96 40.58 6.09
2745 2895 2.153945 CGCCAACATCAATGCGCAC 61.154 57.895 14.90 0.00 40.58 5.34
2746 2896 2.153945 GCCAACATCAATGCGCACG 61.154 57.895 14.90 7.41 0.00 5.34
2747 2897 1.514657 CCAACATCAATGCGCACGG 60.515 57.895 14.90 8.27 0.00 4.94
2748 2898 1.514657 CAACATCAATGCGCACGGG 60.515 57.895 14.90 5.13 0.00 5.28
2749 2899 1.971167 AACATCAATGCGCACGGGT 60.971 52.632 14.90 0.00 0.00 5.28
2750 2900 2.100797 CATCAATGCGCACGGGTG 59.899 61.111 14.90 11.09 0.00 4.61
2751 2901 3.133464 ATCAATGCGCACGGGTGG 61.133 61.111 14.90 0.00 0.00 4.61
2765 2915 3.626924 GTGGCCGGTCTCACCTGT 61.627 66.667 7.97 0.00 35.66 4.00
2766 2916 2.847234 TGGCCGGTCTCACCTGTT 60.847 61.111 7.97 0.00 35.66 3.16
2767 2917 1.534476 TGGCCGGTCTCACCTGTTA 60.534 57.895 7.97 0.00 35.66 2.41
2768 2918 0.907704 TGGCCGGTCTCACCTGTTAT 60.908 55.000 7.97 0.00 35.66 1.89
2769 2919 0.179081 GGCCGGTCTCACCTGTTATC 60.179 60.000 1.90 0.00 35.66 1.75
2770 2920 0.527817 GCCGGTCTCACCTGTTATCG 60.528 60.000 1.90 0.00 35.66 2.92
2771 2921 0.102481 CCGGTCTCACCTGTTATCGG 59.898 60.000 0.00 0.00 35.66 4.18
2772 2922 0.527817 CGGTCTCACCTGTTATCGGC 60.528 60.000 0.00 0.00 35.66 5.54
2773 2923 0.179081 GGTCTCACCTGTTATCGGCC 60.179 60.000 0.00 0.00 34.73 6.13
2774 2924 0.179081 GTCTCACCTGTTATCGGCCC 60.179 60.000 0.00 0.00 0.00 5.80
2775 2925 0.616395 TCTCACCTGTTATCGGCCCA 60.616 55.000 0.00 0.00 0.00 5.36
2776 2926 0.179073 CTCACCTGTTATCGGCCCAG 60.179 60.000 0.00 0.00 0.00 4.45
2777 2927 0.907704 TCACCTGTTATCGGCCCAGT 60.908 55.000 0.00 0.00 0.00 4.00
2778 2928 0.744414 CACCTGTTATCGGCCCAGTG 60.744 60.000 0.00 0.00 0.00 3.66
2779 2929 1.153168 CCTGTTATCGGCCCAGTGG 60.153 63.158 0.63 0.63 0.00 4.00
2780 2930 1.622607 CCTGTTATCGGCCCAGTGGA 61.623 60.000 11.95 0.00 0.00 4.02
2781 2931 0.251916 CTGTTATCGGCCCAGTGGAA 59.748 55.000 11.95 0.00 0.00 3.53
2782 2932 0.251916 TGTTATCGGCCCAGTGGAAG 59.748 55.000 11.95 1.09 0.00 3.46
2783 2933 0.463833 GTTATCGGCCCAGTGGAAGG 60.464 60.000 11.95 0.00 0.00 3.46
2784 2934 0.912487 TTATCGGCCCAGTGGAAGGT 60.912 55.000 11.95 0.00 0.00 3.50
2785 2935 0.912487 TATCGGCCCAGTGGAAGGTT 60.912 55.000 11.95 0.00 0.00 3.50
2786 2936 2.484287 ATCGGCCCAGTGGAAGGTTG 62.484 60.000 11.95 0.00 0.00 3.77
2787 2937 2.991540 GGCCCAGTGGAAGGTTGC 60.992 66.667 11.95 3.74 0.00 4.17
2788 2938 2.991540 GCCCAGTGGAAGGTTGCC 60.992 66.667 11.95 0.00 0.00 4.52
2789 2939 2.520458 CCCAGTGGAAGGTTGCCA 59.480 61.111 11.95 0.00 0.00 4.92
2790 2940 1.077265 CCCAGTGGAAGGTTGCCAT 59.923 57.895 11.95 0.00 37.81 4.40
2791 2941 0.967380 CCCAGTGGAAGGTTGCCATC 60.967 60.000 11.95 0.00 37.81 3.51
2792 2942 0.967380 CCAGTGGAAGGTTGCCATCC 60.967 60.000 1.68 2.73 41.34 3.51
2793 2943 0.038744 CAGTGGAAGGTTGCCATCCT 59.961 55.000 10.29 0.00 41.50 3.24
2794 2944 0.779997 AGTGGAAGGTTGCCATCCTT 59.220 50.000 6.76 6.76 46.44 3.36
2802 2952 5.665916 AAGGTTGCCATCCTTCTTAAATG 57.334 39.130 1.03 0.00 40.80 2.32
2803 2953 4.934356 AGGTTGCCATCCTTCTTAAATGA 58.066 39.130 0.00 0.00 30.18 2.57
2804 2954 4.952335 AGGTTGCCATCCTTCTTAAATGAG 59.048 41.667 0.00 0.00 30.18 2.90
2805 2955 4.098501 GGTTGCCATCCTTCTTAAATGAGG 59.901 45.833 0.00 0.00 0.00 3.86
2806 2956 4.860802 TGCCATCCTTCTTAAATGAGGA 57.139 40.909 4.22 4.22 0.00 3.71
2807 2957 5.191727 TGCCATCCTTCTTAAATGAGGAA 57.808 39.130 5.52 0.00 31.92 3.36
2808 2958 4.949856 TGCCATCCTTCTTAAATGAGGAAC 59.050 41.667 5.52 1.26 31.92 3.62
2809 2959 4.339530 GCCATCCTTCTTAAATGAGGAACC 59.660 45.833 5.52 0.00 31.92 3.62
2810 2960 4.889995 CCATCCTTCTTAAATGAGGAACCC 59.110 45.833 5.52 0.00 31.92 4.11
2811 2961 4.216411 TCCTTCTTAAATGAGGAACCCG 57.784 45.455 0.00 0.00 0.00 5.28
2812 2962 3.585732 TCCTTCTTAAATGAGGAACCCGT 59.414 43.478 0.00 0.00 0.00 5.28
2813 2963 3.689649 CCTTCTTAAATGAGGAACCCGTG 59.310 47.826 0.00 0.00 0.00 4.94
2814 2964 3.343941 TCTTAAATGAGGAACCCGTGG 57.656 47.619 0.00 0.00 0.00 4.94
2815 2965 2.907696 TCTTAAATGAGGAACCCGTGGA 59.092 45.455 0.00 0.00 0.00 4.02
2816 2966 2.773993 TAAATGAGGAACCCGTGGAC 57.226 50.000 0.00 0.00 0.00 4.02
2817 2967 0.037734 AAATGAGGAACCCGTGGACC 59.962 55.000 0.00 0.00 0.00 4.46
2818 2968 2.180159 AATGAGGAACCCGTGGACCG 62.180 60.000 0.00 0.00 0.00 4.79
2830 2980 3.756727 GGACCGGTCCTCGTCCAC 61.757 72.222 40.89 16.29 46.16 4.02
2831 2981 2.987547 GACCGGTCCTCGTCCACA 60.988 66.667 24.75 0.00 37.11 4.17
2832 2982 3.278592 GACCGGTCCTCGTCCACAC 62.279 68.421 24.75 0.00 37.11 3.82
2833 2983 2.989824 CCGGTCCTCGTCCACACT 60.990 66.667 0.00 0.00 37.11 3.55
2834 2984 2.258591 CGGTCCTCGTCCACACTG 59.741 66.667 0.00 0.00 0.00 3.66
2835 2985 2.048127 GGTCCTCGTCCACACTGC 60.048 66.667 0.00 0.00 0.00 4.40
2836 2986 2.574955 GGTCCTCGTCCACACTGCT 61.575 63.158 0.00 0.00 0.00 4.24
2837 2987 1.367840 GTCCTCGTCCACACTGCTT 59.632 57.895 0.00 0.00 0.00 3.91
2838 2988 0.667792 GTCCTCGTCCACACTGCTTC 60.668 60.000 0.00 0.00 0.00 3.86
2839 2989 1.112916 TCCTCGTCCACACTGCTTCA 61.113 55.000 0.00 0.00 0.00 3.02
2840 2990 0.946221 CCTCGTCCACACTGCTTCAC 60.946 60.000 0.00 0.00 0.00 3.18
2841 2991 0.032678 CTCGTCCACACTGCTTCACT 59.967 55.000 0.00 0.00 0.00 3.41
2842 2992 0.032130 TCGTCCACACTGCTTCACTC 59.968 55.000 0.00 0.00 0.00 3.51
2843 2993 0.946221 CGTCCACACTGCTTCACTCC 60.946 60.000 0.00 0.00 0.00 3.85
2844 2994 0.106708 GTCCACACTGCTTCACTCCA 59.893 55.000 0.00 0.00 0.00 3.86
2845 2995 1.059098 TCCACACTGCTTCACTCCAT 58.941 50.000 0.00 0.00 0.00 3.41
2846 2996 1.002430 TCCACACTGCTTCACTCCATC 59.998 52.381 0.00 0.00 0.00 3.51
2847 2997 1.446907 CACACTGCTTCACTCCATCC 58.553 55.000 0.00 0.00 0.00 3.51
2848 2998 0.326264 ACACTGCTTCACTCCATCCC 59.674 55.000 0.00 0.00 0.00 3.85
2849 2999 0.742281 CACTGCTTCACTCCATCCCG 60.742 60.000 0.00 0.00 0.00 5.14
2850 3000 1.817099 CTGCTTCACTCCATCCCGC 60.817 63.158 0.00 0.00 0.00 6.13
2851 3001 2.892425 GCTTCACTCCATCCCGCG 60.892 66.667 0.00 0.00 0.00 6.46
2852 3002 2.202932 CTTCACTCCATCCCGCGG 60.203 66.667 21.04 21.04 0.00 6.46
2853 3003 4.467084 TTCACTCCATCCCGCGGC 62.467 66.667 22.85 0.00 0.00 6.53
2867 3017 4.814294 CGGCCTCCTCGAAACCCG 62.814 72.222 0.00 0.00 40.25 5.28
2868 3018 3.387947 GGCCTCCTCGAAACCCGA 61.388 66.667 0.00 0.00 46.35 5.14
2869 3019 2.125633 GCCTCCTCGAAACCCGAC 60.126 66.667 0.00 0.00 43.23 4.79
2870 3020 2.939261 GCCTCCTCGAAACCCGACA 61.939 63.158 0.00 0.00 43.23 4.35
2871 3021 1.669440 CCTCCTCGAAACCCGACAA 59.331 57.895 0.00 0.00 43.23 3.18
2872 3022 0.669625 CCTCCTCGAAACCCGACAAC 60.670 60.000 0.00 0.00 43.23 3.32
2873 3023 1.007038 TCCTCGAAACCCGACAACG 60.007 57.895 0.00 0.00 43.23 4.10
2874 3024 2.664436 CCTCGAAACCCGACAACGC 61.664 63.158 0.00 0.00 43.23 4.84
2875 3025 1.663702 CTCGAAACCCGACAACGCT 60.664 57.895 0.00 0.00 43.23 5.07
2876 3026 0.387622 CTCGAAACCCGACAACGCTA 60.388 55.000 0.00 0.00 43.23 4.26
2877 3027 0.031857 TCGAAACCCGACAACGCTAA 59.968 50.000 0.00 0.00 43.23 3.09
2878 3028 0.860533 CGAAACCCGACAACGCTAAA 59.139 50.000 0.00 0.00 41.76 1.85
2879 3029 1.397567 CGAAACCCGACAACGCTAAAC 60.398 52.381 0.00 0.00 41.76 2.01
2880 3030 0.946528 AAACCCGACAACGCTAAACC 59.053 50.000 0.00 0.00 38.29 3.27
2881 3031 0.886043 AACCCGACAACGCTAAACCC 60.886 55.000 0.00 0.00 38.29 4.11
2882 3032 1.004200 CCCGACAACGCTAAACCCT 60.004 57.895 0.00 0.00 38.29 4.34
2883 3033 0.247185 CCCGACAACGCTAAACCCTA 59.753 55.000 0.00 0.00 38.29 3.53
2884 3034 1.636988 CCGACAACGCTAAACCCTAG 58.363 55.000 0.00 0.00 38.29 3.02
2885 3035 0.997196 CGACAACGCTAAACCCTAGC 59.003 55.000 0.00 0.00 37.21 3.42
2886 3036 1.366679 GACAACGCTAAACCCTAGCC 58.633 55.000 0.00 0.00 37.26 3.93
2887 3037 0.981943 ACAACGCTAAACCCTAGCCT 59.018 50.000 0.00 0.00 37.26 4.58
2888 3038 1.350019 ACAACGCTAAACCCTAGCCTT 59.650 47.619 0.00 0.00 37.26 4.35
2889 3039 2.224695 ACAACGCTAAACCCTAGCCTTT 60.225 45.455 0.00 0.00 37.26 3.11
2890 3040 2.398252 ACGCTAAACCCTAGCCTTTC 57.602 50.000 0.00 0.00 37.26 2.62
2891 3041 1.907255 ACGCTAAACCCTAGCCTTTCT 59.093 47.619 0.00 0.00 37.26 2.52
2892 3042 2.305052 ACGCTAAACCCTAGCCTTTCTT 59.695 45.455 0.00 0.00 37.26 2.52
2893 3043 3.244805 ACGCTAAACCCTAGCCTTTCTTT 60.245 43.478 0.00 0.00 37.26 2.52
2894 3044 3.127030 CGCTAAACCCTAGCCTTTCTTTG 59.873 47.826 0.00 0.00 37.26 2.77
2895 3045 4.079970 GCTAAACCCTAGCCTTTCTTTGT 58.920 43.478 0.00 0.00 34.65 2.83
2896 3046 4.156190 GCTAAACCCTAGCCTTTCTTTGTC 59.844 45.833 0.00 0.00 34.65 3.18
2897 3047 2.881111 ACCCTAGCCTTTCTTTGTCC 57.119 50.000 0.00 0.00 0.00 4.02
2898 3048 2.349445 ACCCTAGCCTTTCTTTGTCCT 58.651 47.619 0.00 0.00 0.00 3.85
2899 3049 2.306219 ACCCTAGCCTTTCTTTGTCCTC 59.694 50.000 0.00 0.00 0.00 3.71
2900 3050 2.622436 CCTAGCCTTTCTTTGTCCTCG 58.378 52.381 0.00 0.00 0.00 4.63
2901 3051 2.233922 CCTAGCCTTTCTTTGTCCTCGA 59.766 50.000 0.00 0.00 0.00 4.04
2902 3052 2.464157 AGCCTTTCTTTGTCCTCGAG 57.536 50.000 5.13 5.13 0.00 4.04
2903 3053 0.799393 GCCTTTCTTTGTCCTCGAGC 59.201 55.000 6.99 0.00 0.00 5.03
2904 3054 1.609320 GCCTTTCTTTGTCCTCGAGCT 60.609 52.381 6.99 0.00 0.00 4.09
2905 3055 2.342179 CCTTTCTTTGTCCTCGAGCTC 58.658 52.381 6.99 2.73 0.00 4.09
2906 3056 1.989165 CTTTCTTTGTCCTCGAGCTCG 59.011 52.381 30.03 30.03 41.45 5.03
2907 3057 0.388649 TTCTTTGTCCTCGAGCTCGC 60.389 55.000 30.97 17.25 39.60 5.03
2908 3058 1.807573 CTTTGTCCTCGAGCTCGCC 60.808 63.158 30.97 17.70 39.60 5.54
2909 3059 3.626680 TTTGTCCTCGAGCTCGCCG 62.627 63.158 30.97 22.25 39.60 6.46
2930 3080 2.825836 GGCCACCTCGAAGCCATG 60.826 66.667 0.00 0.00 46.34 3.66
2931 3081 2.825836 GCCACCTCGAAGCCATGG 60.826 66.667 7.63 7.63 0.00 3.66
2932 3082 2.124570 CCACCTCGAAGCCATGGG 60.125 66.667 15.13 0.00 0.00 4.00
2942 3092 3.608432 GCCATGGGCTTCTGGAAC 58.392 61.111 15.13 0.00 46.69 3.62
2943 3093 2.054453 GCCATGGGCTTCTGGAACC 61.054 63.158 15.13 0.00 46.69 3.62
2944 3094 1.750399 CCATGGGCTTCTGGAACCG 60.750 63.158 2.85 0.00 34.24 4.44
2945 3095 2.044946 ATGGGCTTCTGGAACCGC 60.045 61.111 0.00 0.00 0.00 5.68
2946 3096 2.905996 ATGGGCTTCTGGAACCGCA 61.906 57.895 0.00 0.00 0.00 5.69
2947 3097 2.282180 GGGCTTCTGGAACCGCAA 60.282 61.111 0.00 0.00 0.00 4.85
2948 3098 2.335712 GGGCTTCTGGAACCGCAAG 61.336 63.158 0.00 0.00 0.00 4.01
2960 3110 3.423154 CGCAAGGGGAAGCACGAC 61.423 66.667 0.00 0.00 0.00 4.34
2961 3111 3.056328 GCAAGGGGAAGCACGACC 61.056 66.667 0.00 0.00 0.00 4.79
2962 3112 2.742372 CAAGGGGAAGCACGACCG 60.742 66.667 0.00 0.00 0.00 4.79
2963 3113 4.699522 AAGGGGAAGCACGACCGC 62.700 66.667 0.00 0.00 39.01 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.678840 GCCCGACGAAGAGAATTAGGTTAA 60.679 45.833 0.00 0.00 0.00 2.01
2 3 3.181483 GCCCGACGAAGAGAATTAGGTTA 60.181 47.826 0.00 0.00 0.00 2.85
3 4 2.418334 GCCCGACGAAGAGAATTAGGTT 60.418 50.000 0.00 0.00 0.00 3.50
4 5 1.136500 GCCCGACGAAGAGAATTAGGT 59.864 52.381 0.00 0.00 0.00 3.08
5 6 1.136305 TGCCCGACGAAGAGAATTAGG 59.864 52.381 0.00 0.00 0.00 2.69
6 7 2.194271 GTGCCCGACGAAGAGAATTAG 58.806 52.381 0.00 0.00 0.00 1.73
7 8 2.288961 GTGCCCGACGAAGAGAATTA 57.711 50.000 0.00 0.00 0.00 1.40
8 9 3.139029 GTGCCCGACGAAGAGAATT 57.861 52.632 0.00 0.00 0.00 2.17
9 10 4.913126 GTGCCCGACGAAGAGAAT 57.087 55.556 0.00 0.00 0.00 2.40
20 21 4.508128 ATGCTACCGTCGTGCCCG 62.508 66.667 0.00 0.00 0.00 6.13
21 22 2.890474 CATGCTACCGTCGTGCCC 60.890 66.667 0.00 0.00 0.00 5.36
22 23 2.165301 GTCATGCTACCGTCGTGCC 61.165 63.158 0.00 0.00 0.00 5.01
23 24 2.505498 CGTCATGCTACCGTCGTGC 61.505 63.158 0.00 0.00 0.00 5.34
24 25 1.872234 CCGTCATGCTACCGTCGTG 60.872 63.158 0.00 0.00 0.00 4.35
25 26 2.488355 CCGTCATGCTACCGTCGT 59.512 61.111 0.00 0.00 0.00 4.34
26 27 2.278596 CCCGTCATGCTACCGTCG 60.279 66.667 0.00 0.00 0.00 5.12
27 28 2.106332 CCCCGTCATGCTACCGTC 59.894 66.667 0.00 0.00 0.00 4.79
28 29 3.467226 CCCCCGTCATGCTACCGT 61.467 66.667 0.00 0.00 0.00 4.83
43 44 1.135960 CTTCCCTCAATCTCCTCCCC 58.864 60.000 0.00 0.00 0.00 4.81
48 49 0.548510 CCACCCTTCCCTCAATCTCC 59.451 60.000 0.00 0.00 0.00 3.71
52 53 1.151361 ACCCCACCCTTCCCTCAAT 60.151 57.895 0.00 0.00 0.00 2.57
60 61 3.146828 GCCTTGTCACCCCACCCTT 62.147 63.158 0.00 0.00 0.00 3.95
62 63 4.678743 GGCCTTGTCACCCCACCC 62.679 72.222 0.00 0.00 0.00 4.61
65 66 2.933287 ATCGGCCTTGTCACCCCA 60.933 61.111 0.00 0.00 0.00 4.96
70 71 4.776322 CCCGCATCGGCCTTGTCA 62.776 66.667 0.00 0.00 46.86 3.58
102 103 1.144057 GCTGGATCACTACCACCCG 59.856 63.158 0.00 0.00 33.57 5.28
106 107 0.752658 CATCGGCTGGATCACTACCA 59.247 55.000 0.00 0.00 31.28 3.25
123 124 5.725551 TCCCCAACTATTGAATGTACCAT 57.274 39.130 0.00 0.00 0.00 3.55
130 131 7.032598 TCTTCTTCTTCCCCAACTATTGAAT 57.967 36.000 0.00 0.00 0.00 2.57
134 135 5.808050 GCCTTCTTCTTCTTCCCCAACTATT 60.808 44.000 0.00 0.00 0.00 1.73
137 138 2.224892 GCCTTCTTCTTCTTCCCCAACT 60.225 50.000 0.00 0.00 0.00 3.16
156 157 2.125350 CAACCTCCAGCTCTCGCC 60.125 66.667 0.00 0.00 36.60 5.54
158 159 0.891373 TCTTCAACCTCCAGCTCTCG 59.109 55.000 0.00 0.00 0.00 4.04
160 161 1.003003 GCTTCTTCAACCTCCAGCTCT 59.997 52.381 0.00 0.00 0.00 4.09
184 185 1.374758 GGGCAGTGGACTTGTCGAG 60.375 63.158 0.00 0.00 0.00 4.04
186 187 0.817634 TTTGGGCAGTGGACTTGTCG 60.818 55.000 0.00 0.00 0.00 4.35
195 224 6.747280 CGACTAAAAATTCTATTTGGGCAGTG 59.253 38.462 0.00 0.00 0.00 3.66
215 244 1.565759 TGGCTAGGGGTAAGTCGACTA 59.434 52.381 20.39 4.54 0.00 2.59
222 251 1.821088 AGGGATTGGCTAGGGGTAAG 58.179 55.000 0.00 0.00 0.00 2.34
233 262 4.580580 GCCTGTAGATTGTTAAGGGATTGG 59.419 45.833 0.00 0.00 0.00 3.16
244 273 2.867109 AAGTGCAGCCTGTAGATTGT 57.133 45.000 0.00 0.00 0.00 2.71
255 285 1.174712 TGAGCCCTTGAAAGTGCAGC 61.175 55.000 0.42 0.00 31.41 5.25
258 288 0.813821 GGATGAGCCCTTGAAAGTGC 59.186 55.000 0.00 0.00 0.00 4.40
270 300 5.841957 AACATATTTGGTTGAGGATGAGC 57.158 39.130 0.00 0.00 0.00 4.26
271 301 8.400947 CAGTAAACATATTTGGTTGAGGATGAG 58.599 37.037 0.00 0.00 33.83 2.90
289 319 8.408043 AGATGGAAAATCATGAACAGTAAACA 57.592 30.769 0.00 0.00 0.00 2.83
293 323 9.695526 CAAAAAGATGGAAAATCATGAACAGTA 57.304 29.630 0.00 0.00 0.00 2.74
295 325 7.118680 CCCAAAAAGATGGAAAATCATGAACAG 59.881 37.037 0.00 0.00 43.54 3.16
300 330 5.187687 CCCCCAAAAAGATGGAAAATCATG 58.812 41.667 0.00 0.00 43.54 3.07
302 332 3.008923 GCCCCCAAAAAGATGGAAAATCA 59.991 43.478 0.00 0.00 43.54 2.57
304 334 2.027285 CGCCCCCAAAAAGATGGAAAAT 60.027 45.455 0.00 0.00 43.54 1.82
305 335 1.346068 CGCCCCCAAAAAGATGGAAAA 59.654 47.619 0.00 0.00 43.54 2.29
334 366 8.296713 TGATTATTGACAAAAGTACCAGAAAGC 58.703 33.333 0.00 0.00 0.00 3.51
337 369 9.349713 ACTTGATTATTGACAAAAGTACCAGAA 57.650 29.630 1.25 0.00 0.00 3.02
343 375 8.832521 ACACGAACTTGATTATTGACAAAAGTA 58.167 29.630 3.30 0.00 0.00 2.24
354 386 7.152645 AGTCACTTGTACACGAACTTGATTAT 58.847 34.615 6.33 0.00 0.00 1.28
364 396 8.733458 AGTATTAACATAGTCACTTGTACACGA 58.267 33.333 6.33 0.00 0.00 4.35
365 397 8.906636 AGTATTAACATAGTCACTTGTACACG 57.093 34.615 0.00 0.00 0.00 4.49
387 419 8.988934 CAAAGACACTGCAATTAAACTAGAGTA 58.011 33.333 0.00 0.00 0.00 2.59
403 435 3.378112 TCAAGCCTTCAACAAAGACACTG 59.622 43.478 0.00 0.00 37.12 3.66
415 447 4.104383 ACAAAATCTCCTCAAGCCTTCA 57.896 40.909 0.00 0.00 0.00 3.02
440 472 8.550710 TGCATCTTCTTGGAAATAATTTTTGG 57.449 30.769 0.00 0.00 0.00 3.28
446 478 6.462487 CCTGCATGCATCTTCTTGGAAATAAT 60.462 38.462 22.97 0.00 0.00 1.28
461 493 5.864418 ACAATAAAATCTCCTGCATGCAT 57.136 34.783 22.97 6.08 0.00 3.96
504 536 8.604035 CATTAGTGAATAGAGCGTGTACAAAAT 58.396 33.333 0.00 0.00 0.00 1.82
507 539 6.627243 ACATTAGTGAATAGAGCGTGTACAA 58.373 36.000 0.00 0.00 0.00 2.41
528 560 7.765695 AGATGGTTTGTCAAATGTCTTACAT 57.234 32.000 0.40 0.00 41.31 2.29
633 670 7.256261 TCAAGCATGAAAACCATTAAGGTGATT 60.256 33.333 0.00 0.00 40.78 2.57
634 671 6.211184 TCAAGCATGAAAACCATTAAGGTGAT 59.789 34.615 0.00 0.00 40.78 3.06
635 672 5.538053 TCAAGCATGAAAACCATTAAGGTGA 59.462 36.000 0.00 0.00 40.78 4.02
636 673 5.782047 TCAAGCATGAAAACCATTAAGGTG 58.218 37.500 0.00 0.00 40.78 4.00
637 674 6.418057 TTCAAGCATGAAAACCATTAAGGT 57.582 33.333 1.05 0.00 46.45 3.50
721 762 4.569180 CCCAGCCCGTAGCCATGG 62.569 72.222 7.63 7.63 45.47 3.66
731 772 2.595884 AAAATGCCAAGCCCAGCCC 61.596 57.895 0.00 0.00 0.00 5.19
800 841 2.182842 CGCTAGACCAGGGCATTGC 61.183 63.158 0.00 0.00 0.00 3.56
806 847 1.040646 TATTCAGCGCTAGACCAGGG 58.959 55.000 10.99 0.00 40.15 4.45
831 872 1.591703 GAGACAGTGGCACCGATGA 59.408 57.895 15.27 0.00 0.00 2.92
832 873 1.807165 CGAGACAGTGGCACCGATG 60.807 63.158 15.27 8.99 0.00 3.84
833 874 2.573869 CGAGACAGTGGCACCGAT 59.426 61.111 15.27 0.00 0.00 4.18
834 875 3.680786 CCGAGACAGTGGCACCGA 61.681 66.667 15.27 0.00 0.00 4.69
844 887 1.118965 TGGAGTTTGGAGCCGAGACA 61.119 55.000 0.00 0.00 0.00 3.41
1874 1987 2.097201 ATTGCACAACGGCATGCCAA 62.097 50.000 34.93 20.38 44.48 4.52
1978 2094 1.734465 GACCTTGCTTGAAGATGGTCG 59.266 52.381 13.04 0.00 35.34 4.79
1982 2098 3.070018 AGAACGACCTTGCTTGAAGATG 58.930 45.455 0.00 0.00 32.82 2.90
1983 2099 3.409026 AGAACGACCTTGCTTGAAGAT 57.591 42.857 0.00 0.00 32.82 2.40
1989 2105 2.846193 TGCTAAAGAACGACCTTGCTT 58.154 42.857 0.00 0.00 0.00 3.91
2000 2116 0.446222 GCGACGCCATTGCTAAAGAA 59.554 50.000 9.14 0.00 34.45 2.52
2003 2119 0.376852 GATGCGACGCCATTGCTAAA 59.623 50.000 18.69 0.00 38.71 1.85
2062 2178 3.666902 CGTAGACAAAATGCTTTCCCACG 60.667 47.826 0.00 0.00 0.00 4.94
2097 2213 1.589716 ATCGCCTCAAGTGCAAAGCC 61.590 55.000 0.00 0.00 0.00 4.35
2135 2251 8.825667 AAATGTGTTCACCCATAATTTTACAC 57.174 30.769 0.00 0.00 36.19 2.90
2151 2267 9.744468 AAAAACTATAGTCCACAAAATGTGTTC 57.256 29.630 5.70 2.76 46.45 3.18
2176 2292 5.637810 CCGACATGAGCACTAAAAGTCTAAA 59.362 40.000 0.00 0.00 0.00 1.85
2190 2306 3.486542 GCTGAGATTTTTCCGACATGAGC 60.487 47.826 0.00 0.00 0.00 4.26
2212 2350 7.186804 ACTATCCAAAATAAATTCTTGCGACG 58.813 34.615 0.00 0.00 0.00 5.12
2226 2364 7.362920 CCGGATTCTTGTTGAACTATCCAAAAT 60.363 37.037 0.00 0.89 37.52 1.82
2233 2371 6.049955 TCTTCCGGATTCTTGTTGAACTAT 57.950 37.500 4.15 0.00 37.52 2.12
2234 2372 5.477607 TCTTCCGGATTCTTGTTGAACTA 57.522 39.130 4.15 0.00 37.52 2.24
2235 2373 4.351874 TCTTCCGGATTCTTGTTGAACT 57.648 40.909 4.15 0.00 37.52 3.01
2236 2374 5.181245 TCATTCTTCCGGATTCTTGTTGAAC 59.819 40.000 4.15 0.00 37.52 3.18
2237 2375 5.312895 TCATTCTTCCGGATTCTTGTTGAA 58.687 37.500 4.15 0.87 39.24 2.69
2238 2376 4.905429 TCATTCTTCCGGATTCTTGTTGA 58.095 39.130 4.15 0.00 0.00 3.18
2239 2377 5.627499 TTCATTCTTCCGGATTCTTGTTG 57.373 39.130 4.15 0.00 0.00 3.33
2248 2386 3.998341 CGTAACCTTTTCATTCTTCCGGA 59.002 43.478 0.00 0.00 0.00 5.14
2263 2401 0.962356 ACGGGACATCGACGTAACCT 60.962 55.000 3.77 0.00 39.30 3.50
2269 2407 0.989890 GAAAGAACGGGACATCGACG 59.010 55.000 0.00 0.00 0.00 5.12
2272 2410 2.000447 GGAAGAAAGAACGGGACATCG 59.000 52.381 0.00 0.00 0.00 3.84
2279 2417 1.154197 GAACCCGGAAGAAAGAACGG 58.846 55.000 0.73 0.00 45.57 4.44
2280 2418 1.873698 TGAACCCGGAAGAAAGAACG 58.126 50.000 0.73 0.00 0.00 3.95
2281 2419 2.747989 GGATGAACCCGGAAGAAAGAAC 59.252 50.000 0.73 0.00 0.00 3.01
2282 2420 2.642807 AGGATGAACCCGGAAGAAAGAA 59.357 45.455 0.73 0.00 40.05 2.52
2283 2421 2.027192 CAGGATGAACCCGGAAGAAAGA 60.027 50.000 0.73 0.00 39.69 2.52
2284 2422 2.290323 ACAGGATGAACCCGGAAGAAAG 60.290 50.000 0.73 0.00 39.69 2.62
2285 2423 1.702957 ACAGGATGAACCCGGAAGAAA 59.297 47.619 0.73 0.00 39.69 2.52
2286 2424 1.358152 ACAGGATGAACCCGGAAGAA 58.642 50.000 0.73 0.00 39.69 2.52
2287 2425 2.241281 TACAGGATGAACCCGGAAGA 57.759 50.000 0.73 0.00 39.69 2.87
2288 2426 3.560636 ATTACAGGATGAACCCGGAAG 57.439 47.619 0.73 0.00 39.69 3.46
2289 2427 5.640158 AATATTACAGGATGAACCCGGAA 57.360 39.130 0.73 0.00 39.69 4.30
2290 2428 5.640158 AAATATTACAGGATGAACCCGGA 57.360 39.130 0.73 0.00 39.69 5.14
2315 2453 0.179073 AAGGCCACGGATTCGAGATG 60.179 55.000 5.01 0.00 40.11 2.90
2384 2522 6.108015 AGTACTAGTAGAAGGTCGAACTGAG 58.892 44.000 2.28 0.00 0.00 3.35
2405 2543 2.419457 TTGTTGTGGGAGGGGTAGTA 57.581 50.000 0.00 0.00 0.00 1.82
2406 2544 1.755200 ATTGTTGTGGGAGGGGTAGT 58.245 50.000 0.00 0.00 0.00 2.73
2407 2545 2.899303 AATTGTTGTGGGAGGGGTAG 57.101 50.000 0.00 0.00 0.00 3.18
2411 2549 4.946478 TTGTTAAATTGTTGTGGGAGGG 57.054 40.909 0.00 0.00 0.00 4.30
2448 2586 1.154413 CACCTTGCGTTGCGTGATC 60.154 57.895 0.00 0.00 0.00 2.92
2450 2588 2.512745 ACACCTTGCGTTGCGTGA 60.513 55.556 2.99 0.00 0.00 4.35
2451 2589 2.047151 AAGACACCTTGCGTTGCGTG 62.047 55.000 0.00 0.00 0.00 5.34
2454 2592 1.282875 GGAAGACACCTTGCGTTGC 59.717 57.895 0.00 0.00 31.18 4.17
2487 2637 3.442625 CCTGATCAAGTGACACATGCATT 59.557 43.478 8.59 0.00 0.00 3.56
2488 2638 3.014623 CCTGATCAAGTGACACATGCAT 58.985 45.455 8.59 0.00 0.00 3.96
2504 2654 0.321671 CACGGTGGAGTTGTCCTGAT 59.678 55.000 0.00 0.00 44.30 2.90
2508 2658 1.525077 TTGCACGGTGGAGTTGTCC 60.525 57.895 10.60 0.00 44.24 4.02
2513 2663 2.351924 AATGGGTTGCACGGTGGAGT 62.352 55.000 10.60 0.00 0.00 3.85
2514 2664 1.586154 GAATGGGTTGCACGGTGGAG 61.586 60.000 10.60 0.00 0.00 3.86
2515 2665 1.602323 GAATGGGTTGCACGGTGGA 60.602 57.895 10.60 3.79 0.00 4.02
2516 2666 1.603455 AGAATGGGTTGCACGGTGG 60.603 57.895 10.60 0.00 0.00 4.61
2517 2667 1.172180 ACAGAATGGGTTGCACGGTG 61.172 55.000 3.15 3.15 43.62 4.94
2518 2668 0.889186 GACAGAATGGGTTGCACGGT 60.889 55.000 0.00 0.00 43.62 4.83
2519 2669 1.586154 GGACAGAATGGGTTGCACGG 61.586 60.000 0.00 0.00 43.62 4.94
2520 2670 1.875963 GGACAGAATGGGTTGCACG 59.124 57.895 0.00 0.00 43.62 5.34
2521 2671 1.586154 CCGGACAGAATGGGTTGCAC 61.586 60.000 0.00 0.00 43.62 4.57
2522 2672 1.303236 CCGGACAGAATGGGTTGCA 60.303 57.895 0.00 0.00 43.62 4.08
2523 2673 2.700773 GCCGGACAGAATGGGTTGC 61.701 63.158 5.05 0.00 43.62 4.17
2524 2674 2.046285 GGCCGGACAGAATGGGTTG 61.046 63.158 5.05 0.00 43.62 3.77
2525 2675 2.355115 GGCCGGACAGAATGGGTT 59.645 61.111 5.05 0.00 43.62 4.11
2526 2676 3.728373 GGGCCGGACAGAATGGGT 61.728 66.667 11.00 0.00 43.62 4.51
2527 2677 4.506255 GGGGCCGGACAGAATGGG 62.506 72.222 11.00 0.00 43.62 4.00
2528 2678 4.856801 CGGGGCCGGACAGAATGG 62.857 72.222 11.00 0.00 36.56 3.16
2529 2679 4.096003 ACGGGGCCGGACAGAATG 62.096 66.667 18.95 0.00 44.69 2.67
2530 2680 3.782443 GACGGGGCCGGACAGAAT 61.782 66.667 18.95 0.00 44.69 2.40
2549 2699 4.410448 TCGTTTGTTCGTTTTACCCAAAC 58.590 39.130 0.00 0.00 41.42 2.93
2550 2700 4.438472 CCTCGTTTGTTCGTTTTACCCAAA 60.438 41.667 0.00 0.00 0.00 3.28
2551 2701 3.065095 CCTCGTTTGTTCGTTTTACCCAA 59.935 43.478 0.00 0.00 0.00 4.12
2552 2702 2.613133 CCTCGTTTGTTCGTTTTACCCA 59.387 45.455 0.00 0.00 0.00 4.51
2553 2703 2.602933 GCCTCGTTTGTTCGTTTTACCC 60.603 50.000 0.00 0.00 0.00 3.69
2554 2704 2.031930 TGCCTCGTTTGTTCGTTTTACC 59.968 45.455 0.00 0.00 0.00 2.85
2555 2705 3.285745 CTGCCTCGTTTGTTCGTTTTAC 58.714 45.455 0.00 0.00 0.00 2.01
2556 2706 2.286536 GCTGCCTCGTTTGTTCGTTTTA 60.287 45.455 0.00 0.00 0.00 1.52
2557 2707 1.533129 GCTGCCTCGTTTGTTCGTTTT 60.533 47.619 0.00 0.00 0.00 2.43
2558 2708 0.028902 GCTGCCTCGTTTGTTCGTTT 59.971 50.000 0.00 0.00 0.00 3.60
2559 2709 1.647084 GCTGCCTCGTTTGTTCGTT 59.353 52.632 0.00 0.00 0.00 3.85
2560 2710 2.251642 GGCTGCCTCGTTTGTTCGT 61.252 57.895 12.43 0.00 0.00 3.85
2561 2711 2.556287 GGCTGCCTCGTTTGTTCG 59.444 61.111 12.43 0.00 0.00 3.95
2562 2712 1.452145 TTGGGCTGCCTCGTTTGTTC 61.452 55.000 19.68 0.00 0.00 3.18
2563 2713 1.454847 TTGGGCTGCCTCGTTTGTT 60.455 52.632 19.68 0.00 0.00 2.83
2564 2714 2.193536 GTTGGGCTGCCTCGTTTGT 61.194 57.895 19.68 0.00 0.00 2.83
2565 2715 2.644992 GTTGGGCTGCCTCGTTTG 59.355 61.111 19.68 0.00 0.00 2.93
2566 2716 2.978010 CGTTGGGCTGCCTCGTTT 60.978 61.111 19.68 0.00 0.00 3.60
2584 2734 2.978452 GATGGATCTGGGCCGTCACG 62.978 65.000 0.00 0.00 40.43 4.35
2585 2735 1.227674 GATGGATCTGGGCCGTCAC 60.228 63.158 0.00 0.00 40.43 3.67
2586 2736 1.383109 AGATGGATCTGGGCCGTCA 60.383 57.895 0.00 0.00 42.63 4.35
2587 2737 3.555967 AGATGGATCTGGGCCGTC 58.444 61.111 0.00 0.00 40.91 4.79
2597 2747 3.941483 GACACAAAACGGATCAGATGGAT 59.059 43.478 0.00 0.00 39.53 3.41
2598 2748 3.334691 GACACAAAACGGATCAGATGGA 58.665 45.455 0.00 0.00 0.00 3.41
2599 2749 2.420022 GGACACAAAACGGATCAGATGG 59.580 50.000 0.00 0.00 0.00 3.51
2600 2750 2.094258 CGGACACAAAACGGATCAGATG 59.906 50.000 0.00 0.00 0.00 2.90
2601 2751 2.346803 CGGACACAAAACGGATCAGAT 58.653 47.619 0.00 0.00 0.00 2.90
2602 2752 1.790755 CGGACACAAAACGGATCAGA 58.209 50.000 0.00 0.00 0.00 3.27
2608 2758 3.666253 GGCCCGGACACAAAACGG 61.666 66.667 0.73 0.00 46.79 4.44
2609 2759 4.020378 CGGCCCGGACACAAAACG 62.020 66.667 0.73 0.00 0.00 3.60
2610 2760 2.592287 TCGGCCCGGACACAAAAC 60.592 61.111 0.73 0.00 0.00 2.43
2611 2761 2.592287 GTCGGCCCGGACACAAAA 60.592 61.111 0.73 0.00 36.91 2.44
2612 2762 4.629523 GGTCGGCCCGGACACAAA 62.630 66.667 0.73 0.00 38.70 2.83
2622 2772 2.885113 GCTCAAAATGGGTCGGCC 59.115 61.111 0.00 0.00 0.00 6.13
2623 2773 2.485122 CGCTCAAAATGGGTCGGC 59.515 61.111 0.00 0.00 0.00 5.54
2624 2774 1.656818 ATGCGCTCAAAATGGGTCGG 61.657 55.000 9.73 0.00 0.00 4.79
2625 2775 0.248215 GATGCGCTCAAAATGGGTCG 60.248 55.000 9.73 0.00 0.00 4.79
2626 2776 1.098050 AGATGCGCTCAAAATGGGTC 58.902 50.000 9.73 0.00 0.00 4.46
2627 2777 1.549203 AAGATGCGCTCAAAATGGGT 58.451 45.000 9.73 0.00 0.00 4.51
2628 2778 2.264813 CAAAGATGCGCTCAAAATGGG 58.735 47.619 9.73 0.00 0.00 4.00
2629 2779 2.664568 CACAAAGATGCGCTCAAAATGG 59.335 45.455 9.73 0.00 0.00 3.16
2630 2780 3.311106 ACACAAAGATGCGCTCAAAATG 58.689 40.909 9.73 3.48 0.00 2.32
2631 2781 3.568538 GACACAAAGATGCGCTCAAAAT 58.431 40.909 9.73 0.00 0.00 1.82
2632 2782 2.601979 CGACACAAAGATGCGCTCAAAA 60.602 45.455 9.73 0.00 0.00 2.44
2633 2783 1.069973 CGACACAAAGATGCGCTCAAA 60.070 47.619 9.73 0.00 0.00 2.69
2634 2784 0.512518 CGACACAAAGATGCGCTCAA 59.487 50.000 9.73 0.00 0.00 3.02
2635 2785 1.291184 CCGACACAAAGATGCGCTCA 61.291 55.000 9.73 0.00 0.00 4.26
2636 2786 1.421485 CCGACACAAAGATGCGCTC 59.579 57.895 9.73 3.60 0.00 5.03
2637 2787 2.034879 CCCGACACAAAGATGCGCT 61.035 57.895 9.73 0.00 0.00 5.92
2638 2788 1.852067 AACCCGACACAAAGATGCGC 61.852 55.000 0.00 0.00 0.00 6.09
2639 2789 0.591170 AAACCCGACACAAAGATGCG 59.409 50.000 0.00 0.00 0.00 4.73
2640 2790 1.335872 CCAAACCCGACACAAAGATGC 60.336 52.381 0.00 0.00 0.00 3.91
2641 2791 2.226330 TCCAAACCCGACACAAAGATG 58.774 47.619 0.00 0.00 0.00 2.90
2642 2792 2.649531 TCCAAACCCGACACAAAGAT 57.350 45.000 0.00 0.00 0.00 2.40
2643 2793 2.500229 GATCCAAACCCGACACAAAGA 58.500 47.619 0.00 0.00 0.00 2.52
2644 2794 1.196808 CGATCCAAACCCGACACAAAG 59.803 52.381 0.00 0.00 0.00 2.77
2645 2795 1.231221 CGATCCAAACCCGACACAAA 58.769 50.000 0.00 0.00 0.00 2.83
2646 2796 1.231958 GCGATCCAAACCCGACACAA 61.232 55.000 0.00 0.00 0.00 3.33
2647 2797 1.669760 GCGATCCAAACCCGACACA 60.670 57.895 0.00 0.00 0.00 3.72
2648 2798 2.396157 GGCGATCCAAACCCGACAC 61.396 63.158 0.00 0.00 0.00 3.67
2649 2799 2.046700 GGCGATCCAAACCCGACA 60.047 61.111 0.00 0.00 0.00 4.35
2650 2800 2.046700 TGGCGATCCAAACCCGAC 60.047 61.111 0.00 0.00 39.99 4.79
2651 2801 2.046700 GTGGCGATCCAAACCCGA 60.047 61.111 0.00 0.00 45.53 5.14
2652 2802 3.496131 CGTGGCGATCCAAACCCG 61.496 66.667 0.00 0.00 45.53 5.28
2653 2803 2.886730 ATCCGTGGCGATCCAAACCC 62.887 60.000 0.00 0.00 45.53 4.11
2654 2804 0.179067 TATCCGTGGCGATCCAAACC 60.179 55.000 0.00 0.00 45.53 3.27
2655 2805 0.935196 GTATCCGTGGCGATCCAAAC 59.065 55.000 0.00 0.00 45.53 2.93
2656 2806 0.179067 GGTATCCGTGGCGATCCAAA 60.179 55.000 0.00 0.00 45.53 3.28
2657 2807 1.444250 GGTATCCGTGGCGATCCAA 59.556 57.895 0.00 0.00 45.53 3.53
2658 2808 2.852180 CGGTATCCGTGGCGATCCA 61.852 63.158 0.00 0.00 42.73 3.41
2659 2809 2.049433 CGGTATCCGTGGCGATCC 60.049 66.667 0.00 0.00 42.73 3.36
2669 2819 2.653130 CGCGTCCGTTCGGTATCC 60.653 66.667 11.04 0.00 0.00 2.59
2670 2820 3.317795 GCGCGTCCGTTCGGTATC 61.318 66.667 8.43 3.18 36.67 2.24
2671 2821 4.860261 GGCGCGTCCGTTCGGTAT 62.860 66.667 8.43 0.00 36.67 2.73
2705 2855 3.858225 GTAGGTAGGTGGCCGCCC 61.858 72.222 32.01 17.72 0.00 6.13
2706 2856 3.858225 GGTAGGTAGGTGGCCGCC 61.858 72.222 28.88 28.88 0.00 6.13
2707 2857 2.379030 GATGGTAGGTAGGTGGCCGC 62.379 65.000 8.12 8.12 0.00 6.53
2708 2858 1.746517 GATGGTAGGTAGGTGGCCG 59.253 63.158 0.00 0.00 0.00 6.13
2709 2859 1.755393 CGGATGGTAGGTAGGTGGCC 61.755 65.000 0.00 0.00 0.00 5.36
2710 2860 1.746517 CGGATGGTAGGTAGGTGGC 59.253 63.158 0.00 0.00 0.00 5.01
2711 2861 1.746517 GCGGATGGTAGGTAGGTGG 59.253 63.158 0.00 0.00 0.00 4.61
2712 2862 1.046472 TGGCGGATGGTAGGTAGGTG 61.046 60.000 0.00 0.00 0.00 4.00
2713 2863 0.325860 TTGGCGGATGGTAGGTAGGT 60.326 55.000 0.00 0.00 0.00 3.08
2714 2864 0.106149 GTTGGCGGATGGTAGGTAGG 59.894 60.000 0.00 0.00 0.00 3.18
2715 2865 0.828022 TGTTGGCGGATGGTAGGTAG 59.172 55.000 0.00 0.00 0.00 3.18
2716 2866 1.414919 GATGTTGGCGGATGGTAGGTA 59.585 52.381 0.00 0.00 0.00 3.08
2717 2867 0.180406 GATGTTGGCGGATGGTAGGT 59.820 55.000 0.00 0.00 0.00 3.08
2718 2868 0.180171 TGATGTTGGCGGATGGTAGG 59.820 55.000 0.00 0.00 0.00 3.18
2719 2869 2.036958 TTGATGTTGGCGGATGGTAG 57.963 50.000 0.00 0.00 0.00 3.18
2720 2870 2.296792 CATTGATGTTGGCGGATGGTA 58.703 47.619 0.00 0.00 0.00 3.25
2721 2871 1.105457 CATTGATGTTGGCGGATGGT 58.895 50.000 0.00 0.00 0.00 3.55
2722 2872 0.249155 GCATTGATGTTGGCGGATGG 60.249 55.000 0.00 0.00 0.00 3.51
2723 2873 0.593008 CGCATTGATGTTGGCGGATG 60.593 55.000 0.00 0.00 45.27 3.51
2724 2874 1.729276 CGCATTGATGTTGGCGGAT 59.271 52.632 0.00 0.00 45.27 4.18
2725 2875 3.186106 CGCATTGATGTTGGCGGA 58.814 55.556 0.00 0.00 45.27 5.54
2728 2878 2.153945 CGTGCGCATTGATGTTGGC 61.154 57.895 15.91 0.00 0.00 4.52
2729 2879 1.514657 CCGTGCGCATTGATGTTGG 60.515 57.895 15.91 1.84 0.00 3.77
2730 2880 1.514657 CCCGTGCGCATTGATGTTG 60.515 57.895 15.91 0.00 0.00 3.33
2731 2881 1.971167 ACCCGTGCGCATTGATGTT 60.971 52.632 15.91 0.00 0.00 2.71
2732 2882 2.359850 ACCCGTGCGCATTGATGT 60.360 55.556 15.91 7.59 0.00 3.06
2733 2883 2.100797 CACCCGTGCGCATTGATG 59.899 61.111 15.91 6.84 0.00 3.07
2734 2884 3.133464 CCACCCGTGCGCATTGAT 61.133 61.111 15.91 0.00 0.00 2.57
2748 2898 1.823169 TAACAGGTGAGACCGGCCAC 61.823 60.000 0.00 7.59 44.90 5.01
2749 2899 0.907704 ATAACAGGTGAGACCGGCCA 60.908 55.000 0.00 0.00 44.90 5.36
2750 2900 0.179081 GATAACAGGTGAGACCGGCC 60.179 60.000 0.00 0.00 44.90 6.13
2751 2901 0.527817 CGATAACAGGTGAGACCGGC 60.528 60.000 0.00 0.00 44.90 6.13
2752 2902 0.102481 CCGATAACAGGTGAGACCGG 59.898 60.000 0.00 0.00 44.90 5.28
2753 2903 0.527817 GCCGATAACAGGTGAGACCG 60.528 60.000 0.00 0.00 44.90 4.79
2754 2904 0.179081 GGCCGATAACAGGTGAGACC 60.179 60.000 0.00 0.00 38.99 3.85
2755 2905 0.179081 GGGCCGATAACAGGTGAGAC 60.179 60.000 0.00 0.00 0.00 3.36
2756 2906 0.616395 TGGGCCGATAACAGGTGAGA 60.616 55.000 0.00 0.00 0.00 3.27
2757 2907 0.179073 CTGGGCCGATAACAGGTGAG 60.179 60.000 0.00 0.00 0.00 3.51
2758 2908 0.907704 ACTGGGCCGATAACAGGTGA 60.908 55.000 10.26 0.00 36.57 4.02
2759 2909 0.744414 CACTGGGCCGATAACAGGTG 60.744 60.000 10.26 0.10 36.57 4.00
2760 2910 1.602237 CACTGGGCCGATAACAGGT 59.398 57.895 10.26 0.00 36.57 4.00
2761 2911 1.153168 CCACTGGGCCGATAACAGG 60.153 63.158 10.26 0.67 36.57 4.00
2762 2912 0.251916 TTCCACTGGGCCGATAACAG 59.748 55.000 0.00 0.00 38.19 3.16
2763 2913 0.251916 CTTCCACTGGGCCGATAACA 59.748 55.000 0.00 0.00 0.00 2.41
2764 2914 0.463833 CCTTCCACTGGGCCGATAAC 60.464 60.000 0.00 0.00 0.00 1.89
2765 2915 0.912487 ACCTTCCACTGGGCCGATAA 60.912 55.000 0.00 0.00 0.00 1.75
2766 2916 0.912487 AACCTTCCACTGGGCCGATA 60.912 55.000 0.00 0.00 0.00 2.92
2767 2917 2.231380 AACCTTCCACTGGGCCGAT 61.231 57.895 0.00 0.00 0.00 4.18
2768 2918 2.852075 AACCTTCCACTGGGCCGA 60.852 61.111 0.00 0.00 0.00 5.54
2769 2919 2.672996 CAACCTTCCACTGGGCCG 60.673 66.667 0.00 0.00 0.00 6.13
2770 2920 2.991540 GCAACCTTCCACTGGGCC 60.992 66.667 0.00 0.00 0.00 5.80
2771 2921 2.991540 GGCAACCTTCCACTGGGC 60.992 66.667 0.00 0.00 0.00 5.36
2772 2922 0.967380 GATGGCAACCTTCCACTGGG 60.967 60.000 0.00 0.00 36.26 4.45
2773 2923 0.967380 GGATGGCAACCTTCCACTGG 60.967 60.000 6.53 0.00 44.38 4.00
2774 2924 0.038744 AGGATGGCAACCTTCCACTG 59.961 55.000 10.99 0.00 46.52 3.66
2775 2925 0.779997 AAGGATGGCAACCTTCCACT 59.220 50.000 22.00 1.01 46.52 4.00
2776 2926 3.363787 AAGGATGGCAACCTTCCAC 57.636 52.632 22.00 0.00 46.52 4.02
2781 2931 4.934356 TCATTTAAGAAGGATGGCAACCT 58.066 39.130 10.99 10.99 39.69 3.50
2782 2932 4.098501 CCTCATTTAAGAAGGATGGCAACC 59.901 45.833 5.52 5.52 0.00 3.77
2783 2933 4.949856 TCCTCATTTAAGAAGGATGGCAAC 59.050 41.667 0.00 0.00 0.00 4.17
2784 2934 5.191727 TCCTCATTTAAGAAGGATGGCAA 57.808 39.130 0.00 0.00 0.00 4.52
2785 2935 4.860802 TCCTCATTTAAGAAGGATGGCA 57.139 40.909 0.00 0.00 0.00 4.92
2786 2936 4.339530 GGTTCCTCATTTAAGAAGGATGGC 59.660 45.833 4.07 0.00 0.00 4.40
2787 2937 4.889995 GGGTTCCTCATTTAAGAAGGATGG 59.110 45.833 4.07 0.00 0.00 3.51
2788 2938 4.576463 CGGGTTCCTCATTTAAGAAGGATG 59.424 45.833 4.07 0.00 0.00 3.51
2789 2939 4.227527 ACGGGTTCCTCATTTAAGAAGGAT 59.772 41.667 4.07 0.00 0.00 3.24
2790 2940 3.585732 ACGGGTTCCTCATTTAAGAAGGA 59.414 43.478 0.00 0.00 0.00 3.36
2791 2941 3.689649 CACGGGTTCCTCATTTAAGAAGG 59.310 47.826 0.00 0.00 0.00 3.46
2792 2942 3.689649 CCACGGGTTCCTCATTTAAGAAG 59.310 47.826 0.00 0.00 0.00 2.85
2793 2943 3.328343 TCCACGGGTTCCTCATTTAAGAA 59.672 43.478 0.00 0.00 0.00 2.52
2794 2944 2.907696 TCCACGGGTTCCTCATTTAAGA 59.092 45.455 0.00 0.00 0.00 2.10
2795 2945 3.007635 GTCCACGGGTTCCTCATTTAAG 58.992 50.000 0.00 0.00 0.00 1.85
2796 2946 2.290450 GGTCCACGGGTTCCTCATTTAA 60.290 50.000 0.00 0.00 0.00 1.52
2797 2947 1.279846 GGTCCACGGGTTCCTCATTTA 59.720 52.381 0.00 0.00 0.00 1.40
2798 2948 0.037734 GGTCCACGGGTTCCTCATTT 59.962 55.000 0.00 0.00 0.00 2.32
2799 2949 1.683441 GGTCCACGGGTTCCTCATT 59.317 57.895 0.00 0.00 0.00 2.57
2800 2950 2.656069 CGGTCCACGGGTTCCTCAT 61.656 63.158 0.00 0.00 39.42 2.90
2801 2951 3.307906 CGGTCCACGGGTTCCTCA 61.308 66.667 0.00 0.00 39.42 3.86
2814 2964 2.987547 TGTGGACGAGGACCGGTC 60.988 66.667 27.04 27.04 43.93 4.79
2815 2965 3.300765 GTGTGGACGAGGACCGGT 61.301 66.667 6.92 6.92 43.93 5.28
2816 2966 2.989824 AGTGTGGACGAGGACCGG 60.990 66.667 0.00 0.00 43.93 5.28
2817 2967 2.258591 CAGTGTGGACGAGGACCG 59.741 66.667 0.00 0.00 45.44 4.79
2818 2968 2.048127 GCAGTGTGGACGAGGACC 60.048 66.667 0.00 0.00 0.00 4.46
2819 2969 0.667792 GAAGCAGTGTGGACGAGGAC 60.668 60.000 0.00 0.00 0.00 3.85
2820 2970 1.112916 TGAAGCAGTGTGGACGAGGA 61.113 55.000 0.00 0.00 0.00 3.71
2821 2971 0.946221 GTGAAGCAGTGTGGACGAGG 60.946 60.000 0.00 0.00 0.00 4.63
2822 2972 0.032678 AGTGAAGCAGTGTGGACGAG 59.967 55.000 0.00 0.00 0.00 4.18
2823 2973 0.032130 GAGTGAAGCAGTGTGGACGA 59.968 55.000 0.00 0.00 0.00 4.20
2824 2974 0.946221 GGAGTGAAGCAGTGTGGACG 60.946 60.000 0.00 0.00 0.00 4.79
2825 2975 0.106708 TGGAGTGAAGCAGTGTGGAC 59.893 55.000 0.00 0.00 0.00 4.02
2826 2976 1.002430 GATGGAGTGAAGCAGTGTGGA 59.998 52.381 0.00 0.00 0.00 4.02
2827 2977 1.446907 GATGGAGTGAAGCAGTGTGG 58.553 55.000 0.00 0.00 0.00 4.17
2828 2978 1.446907 GGATGGAGTGAAGCAGTGTG 58.553 55.000 0.00 0.00 0.00 3.82
2829 2979 0.326264 GGGATGGAGTGAAGCAGTGT 59.674 55.000 0.00 0.00 0.00 3.55
2830 2980 0.742281 CGGGATGGAGTGAAGCAGTG 60.742 60.000 0.00 0.00 0.00 3.66
2831 2981 1.599047 CGGGATGGAGTGAAGCAGT 59.401 57.895 0.00 0.00 0.00 4.40
2832 2982 1.817099 GCGGGATGGAGTGAAGCAG 60.817 63.158 0.00 0.00 0.00 4.24
2833 2983 2.268920 GCGGGATGGAGTGAAGCA 59.731 61.111 0.00 0.00 0.00 3.91
2834 2984 2.892425 CGCGGGATGGAGTGAAGC 60.892 66.667 0.00 0.00 0.00 3.86
2835 2985 2.202932 CCGCGGGATGGAGTGAAG 60.203 66.667 20.10 0.00 0.00 3.02
2836 2986 4.467084 GCCGCGGGATGGAGTGAA 62.467 66.667 29.38 0.00 0.00 3.18
2850 3000 4.814294 CGGGTTTCGAGGAGGCCG 62.814 72.222 0.00 0.00 42.43 6.13
2851 3001 3.387947 TCGGGTTTCGAGGAGGCC 61.388 66.667 0.00 0.00 43.74 5.19
2858 3008 0.031857 TTAGCGTTGTCGGGTTTCGA 59.968 50.000 0.00 0.00 46.77 3.71
2859 3009 0.860533 TTTAGCGTTGTCGGGTTTCG 59.139 50.000 0.00 0.00 40.90 3.46
2860 3010 1.069703 GGTTTAGCGTTGTCGGGTTTC 60.070 52.381 0.00 0.00 37.56 2.78
2861 3011 0.946528 GGTTTAGCGTTGTCGGGTTT 59.053 50.000 0.00 0.00 37.56 3.27
2862 3012 0.886043 GGGTTTAGCGTTGTCGGGTT 60.886 55.000 0.00 0.00 37.56 4.11
2863 3013 1.301953 GGGTTTAGCGTTGTCGGGT 60.302 57.895 0.00 0.00 37.56 5.28
2864 3014 0.247185 TAGGGTTTAGCGTTGTCGGG 59.753 55.000 0.00 0.00 37.56 5.14
2865 3015 1.636988 CTAGGGTTTAGCGTTGTCGG 58.363 55.000 0.00 0.00 37.56 4.79
2866 3016 0.997196 GCTAGGGTTTAGCGTTGTCG 59.003 55.000 0.00 0.00 40.37 4.35
2867 3017 1.066358 AGGCTAGGGTTTAGCGTTGTC 60.066 52.381 0.00 0.00 41.24 3.18
2868 3018 0.981943 AGGCTAGGGTTTAGCGTTGT 59.018 50.000 0.00 0.00 41.24 3.32
2869 3019 2.109425 AAGGCTAGGGTTTAGCGTTG 57.891 50.000 11.83 0.00 44.00 4.10
2870 3020 2.305052 AGAAAGGCTAGGGTTTAGCGTT 59.695 45.455 7.96 7.96 46.50 4.84
2871 3021 1.907255 AGAAAGGCTAGGGTTTAGCGT 59.093 47.619 0.00 0.00 41.24 5.07
2872 3022 2.693267 AGAAAGGCTAGGGTTTAGCG 57.307 50.000 0.00 0.00 41.24 4.26
2873 3023 4.079970 ACAAAGAAAGGCTAGGGTTTAGC 58.920 43.478 0.00 0.00 39.70 3.09
2874 3024 4.700692 GGACAAAGAAAGGCTAGGGTTTAG 59.299 45.833 0.00 0.00 0.00 1.85
2875 3025 4.352893 AGGACAAAGAAAGGCTAGGGTTTA 59.647 41.667 0.00 0.00 0.00 2.01
2876 3026 3.140332 AGGACAAAGAAAGGCTAGGGTTT 59.860 43.478 0.00 0.00 0.00 3.27
2877 3027 2.716969 AGGACAAAGAAAGGCTAGGGTT 59.283 45.455 0.00 0.00 0.00 4.11
2878 3028 2.306219 GAGGACAAAGAAAGGCTAGGGT 59.694 50.000 0.00 0.00 0.00 4.34
2879 3029 2.678190 CGAGGACAAAGAAAGGCTAGGG 60.678 54.545 0.00 0.00 0.00 3.53
2880 3030 2.233922 TCGAGGACAAAGAAAGGCTAGG 59.766 50.000 0.00 0.00 0.00 3.02
2881 3031 3.516615 CTCGAGGACAAAGAAAGGCTAG 58.483 50.000 3.91 0.00 0.00 3.42
2882 3032 2.353803 GCTCGAGGACAAAGAAAGGCTA 60.354 50.000 15.58 0.00 0.00 3.93
2883 3033 1.609320 GCTCGAGGACAAAGAAAGGCT 60.609 52.381 15.58 0.00 0.00 4.58
2884 3034 0.799393 GCTCGAGGACAAAGAAAGGC 59.201 55.000 15.58 0.00 0.00 4.35
2885 3035 2.342179 GAGCTCGAGGACAAAGAAAGG 58.658 52.381 15.58 0.00 0.00 3.11
2886 3036 1.989165 CGAGCTCGAGGACAAAGAAAG 59.011 52.381 32.06 0.00 43.02 2.62
2887 3037 1.935300 GCGAGCTCGAGGACAAAGAAA 60.935 52.381 38.74 0.00 43.02 2.52
2888 3038 0.388649 GCGAGCTCGAGGACAAAGAA 60.389 55.000 38.74 0.00 43.02 2.52
2889 3039 1.213013 GCGAGCTCGAGGACAAAGA 59.787 57.895 38.74 0.00 43.02 2.52
2890 3040 1.807573 GGCGAGCTCGAGGACAAAG 60.808 63.158 38.74 7.73 43.02 2.77
2891 3041 2.261671 GGCGAGCTCGAGGACAAA 59.738 61.111 38.74 0.00 43.02 2.83
2892 3042 4.116328 CGGCGAGCTCGAGGACAA 62.116 66.667 38.74 0.00 43.02 3.18
2913 3063 2.825836 CATGGCTTCGAGGTGGCC 60.826 66.667 0.00 0.00 45.45 5.36
2914 3064 2.825836 CCATGGCTTCGAGGTGGC 60.826 66.667 0.00 0.00 0.00 5.01
2915 3065 2.124570 CCCATGGCTTCGAGGTGG 60.125 66.667 6.09 0.00 0.00 4.61
2916 3066 2.825836 GCCCATGGCTTCGAGGTG 60.826 66.667 6.09 0.00 46.69 4.00
2926 3076 1.750399 CGGTTCCAGAAGCCCATGG 60.750 63.158 4.14 4.14 37.97 3.66
2927 3077 2.409870 GCGGTTCCAGAAGCCCATG 61.410 63.158 4.13 0.00 35.54 3.66
2928 3078 2.044946 GCGGTTCCAGAAGCCCAT 60.045 61.111 4.13 0.00 35.54 4.00
2929 3079 3.126703 TTGCGGTTCCAGAAGCCCA 62.127 57.895 4.13 0.00 35.54 5.36
2930 3080 2.282180 TTGCGGTTCCAGAAGCCC 60.282 61.111 4.13 0.00 35.54 5.19
2931 3081 2.335712 CCTTGCGGTTCCAGAAGCC 61.336 63.158 4.13 0.00 35.54 4.35
2932 3082 2.335712 CCCTTGCGGTTCCAGAAGC 61.336 63.158 0.00 0.00 35.61 3.86
2933 3083 1.675641 CCCCTTGCGGTTCCAGAAG 60.676 63.158 0.00 0.00 0.00 2.85
2934 3084 1.710996 TTCCCCTTGCGGTTCCAGAA 61.711 55.000 0.00 0.00 0.00 3.02
2935 3085 2.124507 CTTCCCCTTGCGGTTCCAGA 62.125 60.000 0.00 0.00 0.00 3.86
2936 3086 1.675641 CTTCCCCTTGCGGTTCCAG 60.676 63.158 0.00 0.00 0.00 3.86
2937 3087 2.434331 CTTCCCCTTGCGGTTCCA 59.566 61.111 0.00 0.00 0.00 3.53
2938 3088 3.062466 GCTTCCCCTTGCGGTTCC 61.062 66.667 0.00 0.00 0.00 3.62
2939 3089 2.282180 TGCTTCCCCTTGCGGTTC 60.282 61.111 0.00 0.00 0.00 3.62
2940 3090 2.597510 GTGCTTCCCCTTGCGGTT 60.598 61.111 0.00 0.00 0.00 4.44
2942 3092 4.697756 TCGTGCTTCCCCTTGCGG 62.698 66.667 0.00 0.00 0.00 5.69
2943 3093 3.423154 GTCGTGCTTCCCCTTGCG 61.423 66.667 0.00 0.00 0.00 4.85
2944 3094 3.056328 GGTCGTGCTTCCCCTTGC 61.056 66.667 0.00 0.00 0.00 4.01
2945 3095 2.742372 CGGTCGTGCTTCCCCTTG 60.742 66.667 0.00 0.00 0.00 3.61
2946 3096 4.699522 GCGGTCGTGCTTCCCCTT 62.700 66.667 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.