Multiple sequence alignment - TraesCS7A01G222900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G222900 chr7A 100.000 3356 0 0 1 3356 191910809 191907454 0.000000e+00 6198.0
1 TraesCS7A01G222900 chr7A 92.553 94 5 2 303 394 202706190 202706283 2.100000e-27 134.0
2 TraesCS7A01G222900 chr7D 91.254 2424 147 32 957 3356 184937618 184935236 0.000000e+00 3241.0
3 TraesCS7A01G222900 chr7B 90.828 2453 154 36 960 3356 154773023 154770586 0.000000e+00 3217.0
4 TraesCS7A01G222900 chr4A 94.839 310 12 2 1 306 395477744 395477435 6.510000e-132 481.0
5 TraesCS7A01G222900 chr4A 94.249 313 14 2 4 312 9557525 9557213 3.030000e-130 475.0
6 TraesCS7A01G222900 chr4A 95.455 44 1 1 413 455 168598134 168598091 6.010000e-08 69.4
7 TraesCS7A01G222900 chr3A 93.789 322 15 3 1 317 124013194 124012873 2.340000e-131 479.0
8 TraesCS7A01G222900 chr3A 77.467 537 101 10 393 922 200824007 200823484 1.510000e-78 303.0
9 TraesCS7A01G222900 chr6B 94.516 310 13 1 1 306 714903775 714904084 3.030000e-130 475.0
10 TraesCS7A01G222900 chr6B 94.231 312 14 2 1 308 236159780 236159469 1.090000e-129 473.0
11 TraesCS7A01G222900 chr6B 91.753 97 5 3 303 398 114397811 114397905 7.560000e-27 132.0
12 TraesCS7A01G222900 chr2A 94.516 310 13 2 1 306 333296870 333296561 3.030000e-130 475.0
13 TraesCS7A01G222900 chr2A 81.433 307 50 5 624 924 4289047 4289352 9.300000e-61 244.0
14 TraesCS7A01G222900 chr5A 94.498 309 13 2 1 305 363885494 363885802 1.090000e-129 473.0
15 TraesCS7A01G222900 chr5A 100.000 98 0 0 1060 1157 689661634 689661537 7.400000e-42 182.0
16 TraesCS7A01G222900 chr5A 97.500 40 0 1 413 451 79427192 79427231 2.160000e-07 67.6
17 TraesCS7A01G222900 chr2B 94.498 309 13 2 1 305 226019769 226020077 1.090000e-129 473.0
18 TraesCS7A01G222900 chr2B 77.922 539 100 10 393 923 471553000 471552473 5.400000e-83 318.0
19 TraesCS7A01G222900 chr2B 94.382 89 5 0 306 394 479043313 479043225 1.620000e-28 137.0
20 TraesCS7A01G222900 chr6A 92.239 335 19 4 1 328 183112802 183112468 5.070000e-128 468.0
21 TraesCS7A01G222900 chr5B 80.512 508 86 5 418 920 620514458 620514957 8.790000e-101 377.0
22 TraesCS7A01G222900 chr5B 92.708 96 3 4 303 394 581229921 581230016 5.840000e-28 135.0
23 TraesCS7A01G222900 chr5D 78.394 523 87 17 394 906 231221932 231222438 1.940000e-82 316.0
24 TraesCS7A01G222900 chr5D 75.717 523 104 17 413 923 494954613 494955124 1.200000e-59 241.0
25 TraesCS7A01G222900 chrUn 81.892 370 54 4 428 791 157091659 157091297 1.960000e-77 300.0
26 TraesCS7A01G222900 chr3D 77.306 542 101 12 393 922 300491038 300491569 1.960000e-77 300.0
27 TraesCS7A01G222900 chr3D 97.500 40 0 1 413 451 182909787 182909826 2.160000e-07 67.6
28 TraesCS7A01G222900 chr4D 76.768 495 92 14 428 911 336115860 336115378 4.300000e-64 255.0
29 TraesCS7A01G222900 chr4D 78.641 206 41 3 413 617 57203736 57203533 2.100000e-27 134.0
30 TraesCS7A01G222900 chr1B 80.795 302 50 7 623 918 1975280 1974981 2.600000e-56 230.0
31 TraesCS7A01G222900 chr1B 93.478 92 4 2 303 394 619087139 619087228 5.840000e-28 135.0
32 TraesCS7A01G222900 chr3B 93.548 93 4 2 302 392 423181181 423181089 1.620000e-28 137.0
33 TraesCS7A01G222900 chr1A 93.548 93 5 1 303 394 335946183 335946275 1.620000e-28 137.0
34 TraesCS7A01G222900 chr1A 97.500 40 0 1 413 451 469575847 469575886 2.160000e-07 67.6
35 TraesCS7A01G222900 chr1A 100.000 30 0 0 430 459 370116634 370116663 4.680000e-04 56.5
36 TraesCS7A01G222900 chr6D 93.478 92 4 2 303 392 103299473 103299564 5.840000e-28 135.0
37 TraesCS7A01G222900 chr2D 92.632 95 4 3 303 394 170488887 170488981 2.100000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G222900 chr7A 191907454 191910809 3355 True 6198 6198 100.000 1 3356 1 chr7A.!!$R1 3355
1 TraesCS7A01G222900 chr7D 184935236 184937618 2382 True 3241 3241 91.254 957 3356 1 chr7D.!!$R1 2399
2 TraesCS7A01G222900 chr7B 154770586 154773023 2437 True 3217 3217 90.828 960 3356 1 chr7B.!!$R1 2396
3 TraesCS7A01G222900 chr3A 200823484 200824007 523 True 303 303 77.467 393 922 1 chr3A.!!$R2 529
4 TraesCS7A01G222900 chr2B 471552473 471553000 527 True 318 318 77.922 393 923 1 chr2B.!!$R1 530
5 TraesCS7A01G222900 chr5D 231221932 231222438 506 False 316 316 78.394 394 906 1 chr5D.!!$F1 512
6 TraesCS7A01G222900 chr5D 494954613 494955124 511 False 241 241 75.717 413 923 1 chr5D.!!$F2 510
7 TraesCS7A01G222900 chr3D 300491038 300491569 531 False 300 300 77.306 393 922 1 chr3D.!!$F2 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
316 317 0.030908 GCGTTACATCTCCCCTCTCG 59.969 60.0 0.00 0.0 0.0 4.04 F
472 474 0.032416 ACCTAGCCCGTCCATACACT 60.032 55.0 0.00 0.0 0.0 3.55 F
1219 1244 0.105593 GCCATTGGAGAGCGAGATCA 59.894 55.0 6.95 0.0 0.0 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2027 2055 0.037326 GACACCCTCGCATCTTCACA 60.037 55.0 0.0 0.0 0.0 3.58 R
2030 2058 0.179000 ATGGACACCCTCGCATCTTC 59.821 55.0 0.0 0.0 0.0 2.87 R
3004 3080 0.318762 ACCAGCTCGTCAAGGAAGTC 59.681 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.461773 CTGTGGCCCGACGAGGAT 61.462 66.667 0.00 0.00 45.00 3.24
20 21 3.723235 CTGTGGCCCGACGAGGATG 62.723 68.421 0.00 0.00 45.00 3.51
21 22 3.771160 GTGGCCCGACGAGGATGT 61.771 66.667 0.00 0.00 45.00 3.06
22 23 3.458163 TGGCCCGACGAGGATGTC 61.458 66.667 0.00 0.00 45.00 3.06
33 34 3.691820 AGGATGTCGGTTCCTCTGA 57.308 52.632 0.00 0.00 39.46 3.27
34 35 1.479709 AGGATGTCGGTTCCTCTGAG 58.520 55.000 0.00 0.00 39.46 3.35
35 36 1.187087 GGATGTCGGTTCCTCTGAGT 58.813 55.000 3.66 0.00 31.38 3.41
36 37 1.134965 GGATGTCGGTTCCTCTGAGTG 60.135 57.143 3.66 0.00 31.38 3.51
37 38 0.898320 ATGTCGGTTCCTCTGAGTGG 59.102 55.000 3.66 0.00 31.38 4.00
38 39 1.185618 TGTCGGTTCCTCTGAGTGGG 61.186 60.000 3.66 0.00 31.38 4.61
39 40 1.609501 TCGGTTCCTCTGAGTGGGG 60.610 63.158 3.66 0.00 0.00 4.96
40 41 2.660064 CGGTTCCTCTGAGTGGGGG 61.660 68.421 3.66 0.00 0.00 5.40
41 42 1.539124 GGTTCCTCTGAGTGGGGGT 60.539 63.158 3.66 0.00 0.00 4.95
42 43 1.679898 GTTCCTCTGAGTGGGGGTG 59.320 63.158 3.66 0.00 0.00 4.61
43 44 1.128188 GTTCCTCTGAGTGGGGGTGT 61.128 60.000 3.66 0.00 0.00 4.16
44 45 0.490017 TTCCTCTGAGTGGGGGTGTA 59.510 55.000 3.66 0.00 0.00 2.90
45 46 0.716591 TCCTCTGAGTGGGGGTGTAT 59.283 55.000 3.66 0.00 0.00 2.29
46 47 0.833287 CCTCTGAGTGGGGGTGTATG 59.167 60.000 3.66 0.00 0.00 2.39
47 48 1.573108 CTCTGAGTGGGGGTGTATGT 58.427 55.000 0.00 0.00 0.00 2.29
48 49 1.208052 CTCTGAGTGGGGGTGTATGTG 59.792 57.143 0.00 0.00 0.00 3.21
49 50 1.203250 TCTGAGTGGGGGTGTATGTGA 60.203 52.381 0.00 0.00 0.00 3.58
50 51 1.839994 CTGAGTGGGGGTGTATGTGAT 59.160 52.381 0.00 0.00 0.00 3.06
51 52 3.038280 CTGAGTGGGGGTGTATGTGATA 58.962 50.000 0.00 0.00 0.00 2.15
52 53 3.038280 TGAGTGGGGGTGTATGTGATAG 58.962 50.000 0.00 0.00 0.00 2.08
53 54 1.768870 AGTGGGGGTGTATGTGATAGC 59.231 52.381 0.00 0.00 0.00 2.97
54 55 1.136828 TGGGGGTGTATGTGATAGCC 58.863 55.000 0.00 0.00 36.14 3.93
55 56 1.345009 TGGGGGTGTATGTGATAGCCT 60.345 52.381 0.00 0.00 37.03 4.58
56 57 1.072331 GGGGGTGTATGTGATAGCCTG 59.928 57.143 0.00 0.00 37.03 4.85
57 58 1.072331 GGGGTGTATGTGATAGCCTGG 59.928 57.143 0.00 0.00 37.03 4.45
58 59 1.543429 GGGTGTATGTGATAGCCTGGC 60.543 57.143 11.65 11.65 34.15 4.85
59 60 1.417890 GGTGTATGTGATAGCCTGGCT 59.582 52.381 26.52 26.52 43.41 4.75
60 61 2.158755 GGTGTATGTGATAGCCTGGCTT 60.159 50.000 28.55 14.60 40.44 4.35
61 62 3.071023 GGTGTATGTGATAGCCTGGCTTA 59.929 47.826 28.55 13.11 40.44 3.09
62 63 4.263068 GGTGTATGTGATAGCCTGGCTTAT 60.263 45.833 28.55 17.26 40.44 1.73
63 64 5.308825 GTGTATGTGATAGCCTGGCTTATT 58.691 41.667 28.55 12.36 40.44 1.40
64 65 6.464222 GTGTATGTGATAGCCTGGCTTATTA 58.536 40.000 28.55 9.22 40.44 0.98
65 66 6.591834 GTGTATGTGATAGCCTGGCTTATTAG 59.408 42.308 28.55 0.00 40.44 1.73
66 67 4.623932 TGTGATAGCCTGGCTTATTAGG 57.376 45.455 28.55 0.00 40.44 2.69
67 68 3.327757 TGTGATAGCCTGGCTTATTAGGG 59.672 47.826 28.55 0.00 40.44 3.53
68 69 3.583086 GTGATAGCCTGGCTTATTAGGGA 59.417 47.826 28.55 6.21 40.44 4.20
69 70 4.226168 GTGATAGCCTGGCTTATTAGGGAT 59.774 45.833 28.55 11.46 40.44 3.85
70 71 4.225942 TGATAGCCTGGCTTATTAGGGATG 59.774 45.833 28.55 0.00 40.44 3.51
71 72 2.706350 AGCCTGGCTTATTAGGGATGA 58.294 47.619 17.22 0.00 33.89 2.92
72 73 3.263724 AGCCTGGCTTATTAGGGATGAT 58.736 45.455 17.22 0.00 33.89 2.45
73 74 4.438913 AGCCTGGCTTATTAGGGATGATA 58.561 43.478 17.22 0.00 33.89 2.15
74 75 4.472833 AGCCTGGCTTATTAGGGATGATAG 59.527 45.833 17.22 0.00 33.89 2.08
75 76 4.471386 GCCTGGCTTATTAGGGATGATAGA 59.529 45.833 12.43 0.00 34.58 1.98
76 77 5.627968 GCCTGGCTTATTAGGGATGATAGAC 60.628 48.000 12.43 0.00 34.58 2.59
77 78 5.723887 CCTGGCTTATTAGGGATGATAGACT 59.276 44.000 0.00 0.00 0.00 3.24
78 79 6.897966 CCTGGCTTATTAGGGATGATAGACTA 59.102 42.308 0.00 0.00 0.00 2.59
79 80 7.147811 CCTGGCTTATTAGGGATGATAGACTAC 60.148 44.444 0.00 0.00 0.00 2.73
80 81 7.479579 TGGCTTATTAGGGATGATAGACTACT 58.520 38.462 0.00 0.00 0.00 2.57
81 82 7.616150 TGGCTTATTAGGGATGATAGACTACTC 59.384 40.741 0.00 0.00 0.00 2.59
82 83 7.616150 GGCTTATTAGGGATGATAGACTACTCA 59.384 40.741 0.00 0.00 0.00 3.41
83 84 9.196139 GCTTATTAGGGATGATAGACTACTCAT 57.804 37.037 6.96 6.96 34.86 2.90
111 112 3.087370 AGGAATTCCTTCTTTTCCGGG 57.913 47.619 21.89 0.00 46.09 5.73
112 113 2.647802 AGGAATTCCTTCTTTTCCGGGA 59.352 45.455 21.89 0.00 46.09 5.14
113 114 3.017442 GGAATTCCTTCTTTTCCGGGAG 58.983 50.000 17.73 0.00 30.41 4.30
114 115 2.130272 ATTCCTTCTTTTCCGGGAGC 57.870 50.000 0.00 0.00 0.00 4.70
115 116 0.037734 TTCCTTCTTTTCCGGGAGCC 59.962 55.000 0.00 0.00 0.00 4.70
116 117 1.378646 CCTTCTTTTCCGGGAGCCC 60.379 63.158 0.00 0.00 0.00 5.19
117 118 1.378762 CTTCTTTTCCGGGAGCCCA 59.621 57.895 0.00 0.00 35.37 5.36
118 119 0.034089 CTTCTTTTCCGGGAGCCCAT 60.034 55.000 0.00 0.00 35.37 4.00
119 120 0.407918 TTCTTTTCCGGGAGCCCATT 59.592 50.000 0.00 0.00 35.37 3.16
120 121 0.034477 TCTTTTCCGGGAGCCCATTC 60.034 55.000 0.00 0.00 35.37 2.67
121 122 1.376609 CTTTTCCGGGAGCCCATTCG 61.377 60.000 0.00 0.00 35.37 3.34
122 123 2.830186 TTTTCCGGGAGCCCATTCGG 62.830 60.000 0.00 1.00 43.42 4.30
124 125 4.547367 CCGGGAGCCCATTCGGAC 62.547 72.222 6.34 0.00 44.69 4.79
125 126 3.781307 CGGGAGCCCATTCGGACA 61.781 66.667 6.34 0.00 35.37 4.02
126 127 2.190578 GGGAGCCCATTCGGACAG 59.809 66.667 0.00 0.00 35.81 3.51
127 128 2.367202 GGGAGCCCATTCGGACAGA 61.367 63.158 0.00 0.00 35.81 3.41
128 129 1.602237 GGAGCCCATTCGGACAGAA 59.398 57.895 0.00 0.00 43.93 3.02
130 131 1.408822 GGAGCCCATTCGGACAGAATT 60.409 52.381 0.00 0.00 46.80 2.17
131 132 1.943340 GAGCCCATTCGGACAGAATTC 59.057 52.381 0.00 0.00 46.80 2.17
132 133 1.025041 GCCCATTCGGACAGAATTCC 58.975 55.000 0.65 0.00 46.80 3.01
133 134 1.681780 GCCCATTCGGACAGAATTCCA 60.682 52.381 0.65 0.00 46.80 3.53
134 135 2.722094 CCCATTCGGACAGAATTCCAA 58.278 47.619 0.65 0.00 46.80 3.53
135 136 3.088532 CCCATTCGGACAGAATTCCAAA 58.911 45.455 0.65 0.00 46.80 3.28
136 137 3.129287 CCCATTCGGACAGAATTCCAAAG 59.871 47.826 0.65 0.00 46.80 2.77
137 138 3.758554 CCATTCGGACAGAATTCCAAAGT 59.241 43.478 0.65 0.00 46.80 2.66
138 139 4.218417 CCATTCGGACAGAATTCCAAAGTT 59.782 41.667 0.65 0.00 46.80 2.66
139 140 5.414454 CCATTCGGACAGAATTCCAAAGTTA 59.586 40.000 0.65 0.00 46.80 2.24
140 141 6.072175 CCATTCGGACAGAATTCCAAAGTTAA 60.072 38.462 0.65 0.00 46.80 2.01
141 142 6.554334 TTCGGACAGAATTCCAAAGTTAAG 57.446 37.500 0.65 0.00 35.04 1.85
142 143 4.454504 TCGGACAGAATTCCAAAGTTAAGC 59.545 41.667 0.65 0.00 35.04 3.09
143 144 4.669197 CGGACAGAATTCCAAAGTTAAGCG 60.669 45.833 0.65 0.00 35.04 4.68
144 145 4.215613 GGACAGAATTCCAAAGTTAAGCGT 59.784 41.667 0.65 0.00 35.49 5.07
145 146 5.108385 ACAGAATTCCAAAGTTAAGCGTG 57.892 39.130 0.65 0.00 0.00 5.34
146 147 3.914364 CAGAATTCCAAAGTTAAGCGTGC 59.086 43.478 0.65 0.00 0.00 5.34
147 148 3.821033 AGAATTCCAAAGTTAAGCGTGCT 59.179 39.130 0.65 0.00 0.00 4.40
148 149 3.831715 ATTCCAAAGTTAAGCGTGCTC 57.168 42.857 0.00 0.00 0.00 4.26
149 150 2.248280 TCCAAAGTTAAGCGTGCTCA 57.752 45.000 0.00 0.00 0.00 4.26
150 151 2.143122 TCCAAAGTTAAGCGTGCTCAG 58.857 47.619 0.00 0.00 0.00 3.35
151 152 1.197721 CCAAAGTTAAGCGTGCTCAGG 59.802 52.381 0.00 0.00 0.00 3.86
152 153 1.197721 CAAAGTTAAGCGTGCTCAGGG 59.802 52.381 0.00 0.00 0.00 4.45
153 154 0.321653 AAGTTAAGCGTGCTCAGGGG 60.322 55.000 0.00 0.00 0.00 4.79
154 155 1.003718 GTTAAGCGTGCTCAGGGGT 60.004 57.895 0.00 0.00 0.00 4.95
155 156 0.248289 GTTAAGCGTGCTCAGGGGTA 59.752 55.000 0.00 0.00 0.00 3.69
156 157 0.535335 TTAAGCGTGCTCAGGGGTAG 59.465 55.000 0.00 0.00 0.00 3.18
157 158 0.613853 TAAGCGTGCTCAGGGGTAGT 60.614 55.000 0.00 0.00 0.00 2.73
158 159 1.481056 AAGCGTGCTCAGGGGTAGTT 61.481 55.000 0.00 0.00 0.00 2.24
159 160 1.003718 GCGTGCTCAGGGGTAGTTT 60.004 57.895 0.00 0.00 0.00 2.66
160 161 1.019805 GCGTGCTCAGGGGTAGTTTC 61.020 60.000 0.00 0.00 0.00 2.78
161 162 0.320374 CGTGCTCAGGGGTAGTTTCA 59.680 55.000 0.00 0.00 0.00 2.69
162 163 1.673033 CGTGCTCAGGGGTAGTTTCAG 60.673 57.143 0.00 0.00 0.00 3.02
163 164 0.984230 TGCTCAGGGGTAGTTTCAGG 59.016 55.000 0.00 0.00 0.00 3.86
164 165 1.276622 GCTCAGGGGTAGTTTCAGGA 58.723 55.000 0.00 0.00 0.00 3.86
165 166 1.840635 GCTCAGGGGTAGTTTCAGGAT 59.159 52.381 0.00 0.00 0.00 3.24
166 167 2.420687 GCTCAGGGGTAGTTTCAGGATG 60.421 54.545 0.00 0.00 37.54 3.51
167 168 2.171448 CTCAGGGGTAGTTTCAGGATGG 59.829 54.545 0.00 0.00 36.16 3.51
168 169 1.212935 CAGGGGTAGTTTCAGGATGGG 59.787 57.143 0.00 0.00 36.16 4.00
169 170 1.203570 AGGGGTAGTTTCAGGATGGGT 60.204 52.381 0.00 0.00 36.16 4.51
170 171 1.064685 GGGGTAGTTTCAGGATGGGTG 60.065 57.143 0.00 0.00 36.16 4.61
171 172 1.913419 GGGTAGTTTCAGGATGGGTGA 59.087 52.381 0.00 0.00 36.16 4.02
172 173 2.355818 GGGTAGTTTCAGGATGGGTGAC 60.356 54.545 0.00 0.00 36.16 3.67
173 174 2.572104 GGTAGTTTCAGGATGGGTGACT 59.428 50.000 0.00 0.00 36.16 3.41
174 175 2.867109 AGTTTCAGGATGGGTGACTG 57.133 50.000 0.00 0.00 36.16 3.51
175 176 2.338809 AGTTTCAGGATGGGTGACTGA 58.661 47.619 0.00 0.00 39.31 3.41
176 177 2.039084 AGTTTCAGGATGGGTGACTGAC 59.961 50.000 0.00 0.00 40.63 3.51
177 178 0.984230 TTCAGGATGGGTGACTGACC 59.016 55.000 0.00 0.00 45.28 4.02
185 186 3.644861 GGTGACTGACCGGGAAATT 57.355 52.632 6.32 0.00 34.02 1.82
186 187 2.773993 GGTGACTGACCGGGAAATTA 57.226 50.000 6.32 0.00 34.02 1.40
187 188 2.353323 GGTGACTGACCGGGAAATTAC 58.647 52.381 6.32 0.00 34.02 1.89
188 189 2.027469 GGTGACTGACCGGGAAATTACT 60.027 50.000 6.32 0.00 34.02 2.24
189 190 3.259902 GTGACTGACCGGGAAATTACTC 58.740 50.000 6.32 0.00 0.00 2.59
190 191 2.235402 TGACTGACCGGGAAATTACTCC 59.765 50.000 6.32 0.00 34.41 3.85
198 199 2.507407 GGAAATTACTCCCAGGTGCA 57.493 50.000 0.00 0.00 0.00 4.57
199 200 2.092323 GGAAATTACTCCCAGGTGCAC 58.908 52.381 8.80 8.80 0.00 4.57
200 201 2.554344 GGAAATTACTCCCAGGTGCACA 60.554 50.000 20.43 0.00 0.00 4.57
201 202 2.200373 AATTACTCCCAGGTGCACAC 57.800 50.000 20.43 8.23 0.00 3.82
202 203 0.036388 ATTACTCCCAGGTGCACACG 60.036 55.000 20.43 8.54 0.00 4.49
203 204 2.107041 TTACTCCCAGGTGCACACGG 62.107 60.000 20.43 17.43 0.00 4.94
204 205 4.704833 CTCCCAGGTGCACACGGG 62.705 72.222 28.68 28.68 40.32 5.28
216 217 2.218066 ACACGGGTGAGGACAAAGT 58.782 52.632 5.71 0.00 0.00 2.66
217 218 0.179056 ACACGGGTGAGGACAAAGTG 60.179 55.000 5.71 0.00 35.07 3.16
218 219 1.227853 ACGGGTGAGGACAAAGTGC 60.228 57.895 0.00 0.00 0.00 4.40
219 220 2.317609 CGGGTGAGGACAAAGTGCG 61.318 63.158 0.00 0.00 0.00 5.34
220 221 2.617274 GGGTGAGGACAAAGTGCGC 61.617 63.158 0.00 0.00 0.00 6.09
221 222 1.891919 GGTGAGGACAAAGTGCGCA 60.892 57.895 5.66 5.66 31.18 6.09
222 223 1.571460 GTGAGGACAAAGTGCGCAG 59.429 57.895 12.22 0.12 34.38 5.18
223 224 0.880278 GTGAGGACAAAGTGCGCAGA 60.880 55.000 12.22 0.00 34.38 4.26
224 225 0.179059 TGAGGACAAAGTGCGCAGAA 60.179 50.000 12.22 0.00 30.20 3.02
225 226 0.944386 GAGGACAAAGTGCGCAGAAA 59.056 50.000 12.22 0.00 0.00 2.52
226 227 1.333619 GAGGACAAAGTGCGCAGAAAA 59.666 47.619 12.22 0.00 0.00 2.29
227 228 1.334869 AGGACAAAGTGCGCAGAAAAG 59.665 47.619 12.22 2.30 0.00 2.27
228 229 1.333619 GGACAAAGTGCGCAGAAAAGA 59.666 47.619 12.22 0.00 0.00 2.52
229 230 2.376032 GACAAAGTGCGCAGAAAAGAC 58.624 47.619 12.22 0.00 0.00 3.01
230 231 2.017049 ACAAAGTGCGCAGAAAAGACT 58.983 42.857 12.22 0.00 0.00 3.24
231 232 3.202906 ACAAAGTGCGCAGAAAAGACTA 58.797 40.909 12.22 0.00 0.00 2.59
232 233 3.248602 ACAAAGTGCGCAGAAAAGACTAG 59.751 43.478 12.22 1.53 0.00 2.57
233 234 2.821991 AGTGCGCAGAAAAGACTAGT 57.178 45.000 12.22 0.00 0.00 2.57
234 235 3.936372 AGTGCGCAGAAAAGACTAGTA 57.064 42.857 12.22 0.00 0.00 1.82
235 236 4.457834 AGTGCGCAGAAAAGACTAGTAT 57.542 40.909 12.22 0.00 0.00 2.12
236 237 4.822026 AGTGCGCAGAAAAGACTAGTATT 58.178 39.130 12.22 0.00 0.00 1.89
237 238 4.627467 AGTGCGCAGAAAAGACTAGTATTG 59.373 41.667 12.22 0.00 0.00 1.90
238 239 4.625742 GTGCGCAGAAAAGACTAGTATTGA 59.374 41.667 12.22 0.00 0.00 2.57
239 240 5.292101 GTGCGCAGAAAAGACTAGTATTGAT 59.708 40.000 12.22 0.00 0.00 2.57
240 241 5.520288 TGCGCAGAAAAGACTAGTATTGATC 59.480 40.000 5.66 5.93 0.00 2.92
241 242 5.751028 GCGCAGAAAAGACTAGTATTGATCT 59.249 40.000 0.30 8.07 0.00 2.75
242 243 6.292061 GCGCAGAAAAGACTAGTATTGATCTG 60.292 42.308 26.54 26.54 34.47 2.90
243 244 6.754209 CGCAGAAAAGACTAGTATTGATCTGT 59.246 38.462 28.67 6.17 34.16 3.41
244 245 7.253917 CGCAGAAAAGACTAGTATTGATCTGTG 60.254 40.741 28.67 28.07 35.17 3.66
245 246 7.010923 GCAGAAAAGACTAGTATTGATCTGTGG 59.989 40.741 28.67 15.98 34.16 4.17
246 247 7.493971 CAGAAAAGACTAGTATTGATCTGTGGG 59.506 40.741 24.47 10.26 30.53 4.61
247 248 5.878406 AAGACTAGTATTGATCTGTGGGG 57.122 43.478 1.03 0.00 0.00 4.96
248 249 3.643792 AGACTAGTATTGATCTGTGGGGC 59.356 47.826 0.00 0.00 0.00 5.80
249 250 2.706190 ACTAGTATTGATCTGTGGGGCC 59.294 50.000 0.00 0.00 0.00 5.80
250 251 1.595311 AGTATTGATCTGTGGGGCCA 58.405 50.000 4.39 0.00 0.00 5.36
251 252 1.492176 AGTATTGATCTGTGGGGCCAG 59.508 52.381 4.39 0.00 0.00 4.85
252 253 1.212935 GTATTGATCTGTGGGGCCAGT 59.787 52.381 4.39 0.00 34.02 4.00
253 254 0.257039 ATTGATCTGTGGGGCCAGTC 59.743 55.000 4.39 0.00 34.02 3.51
254 255 0.842030 TTGATCTGTGGGGCCAGTCT 60.842 55.000 4.39 0.00 34.02 3.24
255 256 0.042581 TGATCTGTGGGGCCAGTCTA 59.957 55.000 4.39 0.00 34.02 2.59
256 257 0.755686 GATCTGTGGGGCCAGTCTAG 59.244 60.000 4.39 0.00 34.02 2.43
257 258 0.339859 ATCTGTGGGGCCAGTCTAGA 59.660 55.000 4.39 1.35 34.02 2.43
258 259 0.339859 TCTGTGGGGCCAGTCTAGAT 59.660 55.000 4.39 0.00 34.02 1.98
259 260 0.755686 CTGTGGGGCCAGTCTAGATC 59.244 60.000 4.39 0.00 0.00 2.75
260 261 0.691078 TGTGGGGCCAGTCTAGATCC 60.691 60.000 4.39 0.00 0.00 3.36
261 262 1.074471 TGGGGCCAGTCTAGATCCC 60.074 63.158 4.39 11.66 36.25 3.85
262 263 2.210711 GGGGCCAGTCTAGATCCCG 61.211 68.421 4.39 0.00 37.85 5.14
263 264 2.737830 GGCCAGTCTAGATCCCGC 59.262 66.667 0.00 0.00 0.00 6.13
264 265 2.737830 GCCAGTCTAGATCCCGCC 59.262 66.667 0.00 0.00 0.00 6.13
265 266 2.134287 GCCAGTCTAGATCCCGCCA 61.134 63.158 0.00 0.00 0.00 5.69
266 267 2.045280 CCAGTCTAGATCCCGCCAG 58.955 63.158 0.00 0.00 0.00 4.85
267 268 1.467678 CCAGTCTAGATCCCGCCAGG 61.468 65.000 0.00 0.00 37.24 4.45
275 276 2.036098 TCCCGCCAGGAGTAACGA 59.964 61.111 0.00 0.00 40.93 3.85
276 277 2.183555 CCCGCCAGGAGTAACGAC 59.816 66.667 0.00 0.00 41.02 4.34
277 278 2.183555 CCGCCAGGAGTAACGACC 59.816 66.667 0.00 0.00 41.02 4.79
278 279 2.642254 CCGCCAGGAGTAACGACCA 61.642 63.158 0.00 0.00 41.02 4.02
279 280 1.445582 CGCCAGGAGTAACGACCAC 60.446 63.158 0.00 0.00 0.00 4.16
280 281 1.079336 GCCAGGAGTAACGACCACC 60.079 63.158 0.00 0.00 0.00 4.61
281 282 1.542187 GCCAGGAGTAACGACCACCT 61.542 60.000 0.00 0.00 34.46 4.00
282 283 0.246635 CCAGGAGTAACGACCACCTG 59.753 60.000 0.00 0.00 44.01 4.00
283 284 0.389948 CAGGAGTAACGACCACCTGC 60.390 60.000 0.00 0.00 40.93 4.85
284 285 1.445582 GGAGTAACGACCACCTGCG 60.446 63.158 0.00 0.00 0.00 5.18
285 286 1.445582 GAGTAACGACCACCTGCGG 60.446 63.158 0.00 0.00 0.00 5.69
286 287 2.433664 GTAACGACCACCTGCGGG 60.434 66.667 11.02 11.02 38.88 6.13
295 296 2.842462 ACCTGCGGGTGTGTCTGA 60.842 61.111 18.90 0.00 45.43 3.27
296 297 2.047844 CCTGCGGGTGTGTCTGAG 60.048 66.667 2.29 0.00 0.00 3.35
297 298 2.047844 CTGCGGGTGTGTCTGAGG 60.048 66.667 0.00 0.00 0.00 3.86
298 299 4.314440 TGCGGGTGTGTCTGAGGC 62.314 66.667 0.00 0.00 0.00 4.70
300 301 3.991051 CGGGTGTGTCTGAGGCGT 61.991 66.667 0.00 0.00 0.00 5.68
301 302 2.426023 GGGTGTGTCTGAGGCGTT 59.574 61.111 0.00 0.00 0.00 4.84
302 303 1.669440 GGGTGTGTCTGAGGCGTTA 59.331 57.895 0.00 0.00 0.00 3.18
303 304 0.669625 GGGTGTGTCTGAGGCGTTAC 60.670 60.000 0.00 0.00 0.00 2.50
304 305 0.032952 GGTGTGTCTGAGGCGTTACA 59.967 55.000 0.00 0.00 0.00 2.41
305 306 1.337823 GGTGTGTCTGAGGCGTTACAT 60.338 52.381 0.00 0.00 0.00 2.29
306 307 1.993370 GTGTGTCTGAGGCGTTACATC 59.007 52.381 0.00 0.00 0.00 3.06
307 308 1.893137 TGTGTCTGAGGCGTTACATCT 59.107 47.619 0.00 0.00 0.00 2.90
308 309 2.094700 TGTGTCTGAGGCGTTACATCTC 60.095 50.000 0.00 0.00 0.00 2.75
309 310 1.476891 TGTCTGAGGCGTTACATCTCC 59.523 52.381 0.00 0.00 0.00 3.71
310 311 1.112113 TCTGAGGCGTTACATCTCCC 58.888 55.000 0.00 0.00 0.00 4.30
311 312 0.105039 CTGAGGCGTTACATCTCCCC 59.895 60.000 0.00 0.00 0.00 4.81
312 313 0.325296 TGAGGCGTTACATCTCCCCT 60.325 55.000 0.00 0.00 0.00 4.79
313 314 0.389757 GAGGCGTTACATCTCCCCTC 59.610 60.000 0.00 0.00 32.93 4.30
314 315 0.032017 AGGCGTTACATCTCCCCTCT 60.032 55.000 0.00 0.00 0.00 3.69
315 316 0.389757 GGCGTTACATCTCCCCTCTC 59.610 60.000 0.00 0.00 0.00 3.20
316 317 0.030908 GCGTTACATCTCCCCTCTCG 59.969 60.000 0.00 0.00 0.00 4.04
317 318 1.390565 CGTTACATCTCCCCTCTCGT 58.609 55.000 0.00 0.00 0.00 4.18
318 319 1.749634 CGTTACATCTCCCCTCTCGTT 59.250 52.381 0.00 0.00 0.00 3.85
319 320 2.479730 CGTTACATCTCCCCTCTCGTTG 60.480 54.545 0.00 0.00 0.00 4.10
320 321 2.496470 GTTACATCTCCCCTCTCGTTGT 59.504 50.000 0.00 0.00 0.00 3.32
321 322 1.645710 ACATCTCCCCTCTCGTTGTT 58.354 50.000 0.00 0.00 0.00 2.83
322 323 2.816411 ACATCTCCCCTCTCGTTGTTA 58.184 47.619 0.00 0.00 0.00 2.41
323 324 3.375699 ACATCTCCCCTCTCGTTGTTAT 58.624 45.455 0.00 0.00 0.00 1.89
324 325 3.133003 ACATCTCCCCTCTCGTTGTTATG 59.867 47.826 0.00 0.00 0.00 1.90
325 326 1.480954 TCTCCCCTCTCGTTGTTATGC 59.519 52.381 0.00 0.00 0.00 3.14
326 327 1.207089 CTCCCCTCTCGTTGTTATGCA 59.793 52.381 0.00 0.00 0.00 3.96
327 328 1.837439 TCCCCTCTCGTTGTTATGCAT 59.163 47.619 3.79 3.79 0.00 3.96
328 329 2.158957 TCCCCTCTCGTTGTTATGCATC 60.159 50.000 0.19 0.00 0.00 3.91
329 330 2.158900 CCCCTCTCGTTGTTATGCATCT 60.159 50.000 0.19 0.00 0.00 2.90
330 331 3.126831 CCCTCTCGTTGTTATGCATCTC 58.873 50.000 0.19 0.00 0.00 2.75
331 332 3.126831 CCTCTCGTTGTTATGCATCTCC 58.873 50.000 0.19 0.00 0.00 3.71
332 333 3.430790 CCTCTCGTTGTTATGCATCTCCA 60.431 47.826 0.19 0.00 0.00 3.86
333 334 4.375272 CTCTCGTTGTTATGCATCTCCAT 58.625 43.478 0.19 0.00 0.00 3.41
334 335 4.122046 TCTCGTTGTTATGCATCTCCATG 58.878 43.478 0.19 0.00 0.00 3.66
335 336 3.205338 TCGTTGTTATGCATCTCCATGG 58.795 45.455 4.97 4.97 0.00 3.66
336 337 3.118445 TCGTTGTTATGCATCTCCATGGA 60.118 43.478 15.27 15.27 34.38 3.41
337 338 3.817084 CGTTGTTATGCATCTCCATGGAT 59.183 43.478 16.63 1.02 43.17 3.41
338 339 4.996758 CGTTGTTATGCATCTCCATGGATA 59.003 41.667 16.63 8.92 41.14 2.59
339 340 5.121298 CGTTGTTATGCATCTCCATGGATAG 59.879 44.000 16.63 9.32 42.43 2.08
340 341 6.233434 GTTGTTATGCATCTCCATGGATAGA 58.767 40.000 16.63 10.76 42.43 1.98
341 342 6.631763 TGTTATGCATCTCCATGGATAGAT 57.368 37.500 16.63 12.78 42.43 1.98
342 343 6.647229 TGTTATGCATCTCCATGGATAGATC 58.353 40.000 16.63 9.90 42.43 2.75
343 344 6.442885 TGTTATGCATCTCCATGGATAGATCT 59.557 38.462 16.63 0.00 42.43 2.75
344 345 7.037802 TGTTATGCATCTCCATGGATAGATCTT 60.038 37.037 16.63 9.84 42.43 2.40
345 346 5.161943 TGCATCTCCATGGATAGATCTTG 57.838 43.478 16.63 6.79 29.93 3.02
346 347 3.940221 GCATCTCCATGGATAGATCTTGC 59.060 47.826 16.63 12.79 29.93 4.01
347 348 3.949842 TCTCCATGGATAGATCTTGCG 57.050 47.619 16.63 0.00 0.00 4.85
348 349 3.234353 TCTCCATGGATAGATCTTGCGT 58.766 45.455 16.63 0.00 0.00 5.24
349 350 3.006217 TCTCCATGGATAGATCTTGCGTG 59.994 47.826 16.63 6.14 0.00 5.34
350 351 2.700371 TCCATGGATAGATCTTGCGTGT 59.300 45.455 11.44 0.00 0.00 4.49
351 352 2.804527 CCATGGATAGATCTTGCGTGTG 59.195 50.000 5.56 0.00 0.00 3.82
352 353 1.939974 TGGATAGATCTTGCGTGTGC 58.060 50.000 0.00 0.00 43.20 4.57
388 389 8.899427 TTTTATTTTTCATGCAATGTTCTCCA 57.101 26.923 0.00 0.00 46.80 3.86
389 390 8.899427 TTTATTTTTCATGCAATGTTCTCCAA 57.101 26.923 0.00 0.00 46.80 3.53
390 391 6.790285 ATTTTTCATGCAATGTTCTCCAAC 57.210 33.333 0.00 0.00 46.80 3.77
391 392 4.933505 TTTCATGCAATGTTCTCCAACA 57.066 36.364 0.00 0.00 46.80 3.33
392 393 4.508461 TTCATGCAATGTTCTCCAACAG 57.492 40.909 0.00 0.00 45.85 3.16
393 394 3.489355 TCATGCAATGTTCTCCAACAGT 58.511 40.909 0.00 0.00 45.85 3.55
394 395 3.503363 TCATGCAATGTTCTCCAACAGTC 59.497 43.478 0.00 0.00 45.85 3.51
395 396 2.929641 TGCAATGTTCTCCAACAGTCA 58.070 42.857 0.00 0.00 45.85 3.41
396 397 3.489355 TGCAATGTTCTCCAACAGTCAT 58.511 40.909 0.00 0.00 45.85 3.06
397 398 3.503363 TGCAATGTTCTCCAACAGTCATC 59.497 43.478 0.00 0.00 45.85 2.92
398 399 3.425359 GCAATGTTCTCCAACAGTCATCG 60.425 47.826 0.00 0.00 45.85 3.84
439 440 0.175073 GCTACTAACGGTGTCCTGGG 59.825 60.000 0.00 0.00 0.00 4.45
463 465 3.717750 GGTACCAACCTAGCCCGT 58.282 61.111 7.15 0.00 43.08 5.28
470 472 0.828022 CAACCTAGCCCGTCCATACA 59.172 55.000 0.00 0.00 0.00 2.29
472 474 0.032416 ACCTAGCCCGTCCATACACT 60.032 55.000 0.00 0.00 0.00 3.55
477 479 1.520787 CCCGTCCATACACTTCGGC 60.521 63.158 0.00 0.00 39.87 5.54
503 505 1.147153 GAAGGGCCCTCATTCTCCG 59.853 63.158 28.84 0.00 33.75 4.63
514 516 3.243907 CCTCATTCTCCGTAAGATGGACC 60.244 52.174 0.00 0.00 43.02 4.46
519 521 0.689745 TCCGTAAGATGGACCCCAGG 60.690 60.000 0.00 0.00 36.75 4.45
520 522 1.696097 CCGTAAGATGGACCCCAGGG 61.696 65.000 0.00 0.00 36.75 4.45
534 536 0.468029 CCAGGGGATGTATGTTGGGC 60.468 60.000 0.00 0.00 0.00 5.36
535 537 0.258484 CAGGGGATGTATGTTGGGCA 59.742 55.000 0.00 0.00 0.00 5.36
536 538 0.552848 AGGGGATGTATGTTGGGCAG 59.447 55.000 0.00 0.00 0.00 4.85
547 550 3.350219 TGTTGGGCAGAAGATAAGACC 57.650 47.619 0.00 0.00 0.00 3.85
554 557 3.440228 GCAGAAGATAAGACCACGTCTC 58.560 50.000 0.00 0.00 42.59 3.36
576 579 3.381908 CCTGAAGACTTGCCGTATACTCT 59.618 47.826 0.56 0.00 0.00 3.24
582 585 4.579753 AGACTTGCCGTATACTCTAAGACC 59.420 45.833 13.41 7.38 0.00 3.85
586 589 4.789807 TGCCGTATACTCTAAGACCTCTT 58.210 43.478 0.56 0.00 39.85 2.85
587 590 5.198965 TGCCGTATACTCTAAGACCTCTTT 58.801 41.667 0.56 0.00 37.40 2.52
588 591 5.298777 TGCCGTATACTCTAAGACCTCTTTC 59.701 44.000 0.56 0.00 37.40 2.62
600 603 1.441729 CTCTTTCGCCGCCTCCATA 59.558 57.895 0.00 0.00 0.00 2.74
615 624 3.564571 CCTCCATATCAGGATACCGACCT 60.565 52.174 0.00 0.00 36.99 3.85
616 625 4.090090 CTCCATATCAGGATACCGACCTT 58.910 47.826 0.00 0.00 36.99 3.50
617 626 5.262009 CTCCATATCAGGATACCGACCTTA 58.738 45.833 0.00 0.00 36.99 2.69
618 627 5.838955 TCCATATCAGGATACCGACCTTAT 58.161 41.667 0.00 0.00 35.35 1.73
619 628 6.977104 TCCATATCAGGATACCGACCTTATA 58.023 40.000 0.00 0.00 35.35 0.98
620 629 7.415908 TCCATATCAGGATACCGACCTTATAA 58.584 38.462 0.00 0.00 35.35 0.98
621 630 7.560262 TCCATATCAGGATACCGACCTTATAAG 59.440 40.741 5.43 5.43 35.35 1.73
644 653 4.475919 TGTAACCCTAGATACCCTACCC 57.524 50.000 0.00 0.00 0.00 3.69
646 655 1.838611 ACCCTAGATACCCTACCCGA 58.161 55.000 0.00 0.00 0.00 5.14
648 657 1.272369 CCCTAGATACCCTACCCGACC 60.272 61.905 0.00 0.00 0.00 4.79
659 668 4.106987 ACCCTACCCGACCTGTATATAAGT 59.893 45.833 0.00 0.00 0.00 2.24
705 715 6.378280 GGGGACATCAACACAATCTTATTCTT 59.622 38.462 0.00 0.00 0.00 2.52
748 761 6.205853 ACACATCTGATCTCGAGGTAGATTAC 59.794 42.308 13.56 0.00 36.33 1.89
811 824 6.096846 GCAGGATGTATGGTTTTACCTTCATT 59.903 38.462 0.00 0.00 37.57 2.57
814 827 9.762381 AGGATGTATGGTTTTACCTTCATTAAA 57.238 29.630 0.00 0.00 39.58 1.52
817 830 9.869757 ATGTATGGTTTTACCTTCATTAAAAGC 57.130 29.630 8.95 8.95 42.92 3.51
819 832 6.394025 TGGTTTTACCTTCATTAAAAGCGT 57.606 33.333 10.50 0.00 44.39 5.07
825 838 5.622770 ACCTTCATTAAAAGCGTTCGAAT 57.377 34.783 0.00 0.00 0.00 3.34
830 843 4.932799 TCATTAAAAGCGTTCGAATCTGGA 59.067 37.500 0.00 0.00 0.00 3.86
840 854 4.606232 CGTTCGAATCTGGATAAACATCGC 60.606 45.833 0.00 0.00 0.00 4.58
853 867 1.568504 ACATCGCCTCCCTTGTTCTA 58.431 50.000 0.00 0.00 0.00 2.10
864 878 5.189934 CCTCCCTTGTTCTAGTTACCATCTT 59.810 44.000 0.00 0.00 0.00 2.40
874 888 7.979786 TCTAGTTACCATCTTTCCAAGATCT 57.020 36.000 0.00 0.00 46.20 2.75
878 892 7.918076 AGTTACCATCTTTCCAAGATCTACAA 58.082 34.615 0.00 0.00 46.20 2.41
879 893 8.552296 AGTTACCATCTTTCCAAGATCTACAAT 58.448 33.333 0.00 0.00 46.20 2.71
893 908 2.023695 TCTACAATTCGGGACCCCTACT 60.024 50.000 4.46 0.00 0.00 2.57
907 922 0.179936 CCTACTCCGAGGTCTACCGT 59.820 60.000 0.00 0.00 42.08 4.83
928 943 2.953284 TTTTACCCCGACACCAATGA 57.047 45.000 0.00 0.00 0.00 2.57
929 944 3.443145 TTTTACCCCGACACCAATGAT 57.557 42.857 0.00 0.00 0.00 2.45
930 945 2.411628 TTACCCCGACACCAATGATG 57.588 50.000 0.00 0.00 0.00 3.07
931 946 1.281419 TACCCCGACACCAATGATGT 58.719 50.000 0.00 0.00 0.00 3.06
932 947 1.281419 ACCCCGACACCAATGATGTA 58.719 50.000 0.00 0.00 0.00 2.29
933 948 1.631388 ACCCCGACACCAATGATGTAA 59.369 47.619 0.00 0.00 0.00 2.41
934 949 2.014128 CCCCGACACCAATGATGTAAC 58.986 52.381 0.00 0.00 0.00 2.50
935 950 2.616765 CCCCGACACCAATGATGTAACA 60.617 50.000 0.00 0.00 0.00 2.41
936 951 3.078097 CCCGACACCAATGATGTAACAA 58.922 45.455 0.00 0.00 0.00 2.83
937 952 3.504134 CCCGACACCAATGATGTAACAAA 59.496 43.478 0.00 0.00 0.00 2.83
938 953 4.157656 CCCGACACCAATGATGTAACAAAT 59.842 41.667 0.00 0.00 0.00 2.32
939 954 5.331902 CCGACACCAATGATGTAACAAATC 58.668 41.667 0.00 0.00 0.00 2.17
940 955 5.331902 CGACACCAATGATGTAACAAATCC 58.668 41.667 0.00 0.00 0.00 3.01
941 956 5.106357 CGACACCAATGATGTAACAAATCCA 60.106 40.000 0.00 0.00 0.00 3.41
942 957 6.569418 CGACACCAATGATGTAACAAATCCAA 60.569 38.462 0.00 0.00 0.00 3.53
943 958 7.060383 ACACCAATGATGTAACAAATCCAAA 57.940 32.000 0.00 0.00 0.00 3.28
944 959 7.678837 ACACCAATGATGTAACAAATCCAAAT 58.321 30.769 0.00 0.00 0.00 2.32
945 960 7.603404 ACACCAATGATGTAACAAATCCAAATG 59.397 33.333 0.00 0.00 0.00 2.32
946 961 7.603404 CACCAATGATGTAACAAATCCAAATGT 59.397 33.333 0.00 0.00 0.00 2.71
947 962 7.603404 ACCAATGATGTAACAAATCCAAATGTG 59.397 33.333 0.00 0.00 0.00 3.21
948 963 7.818446 CCAATGATGTAACAAATCCAAATGTGA 59.182 33.333 0.00 0.00 0.00 3.58
949 964 9.373603 CAATGATGTAACAAATCCAAATGTGAT 57.626 29.630 0.00 0.00 0.00 3.06
950 965 8.936070 ATGATGTAACAAATCCAAATGTGATG 57.064 30.769 0.00 0.00 0.00 3.07
951 966 7.321908 TGATGTAACAAATCCAAATGTGATGG 58.678 34.615 0.00 0.00 39.41 3.51
952 967 6.035368 TGTAACAAATCCAAATGTGATGGG 57.965 37.500 0.00 0.00 38.54 4.00
953 968 5.777223 TGTAACAAATCCAAATGTGATGGGA 59.223 36.000 0.00 0.00 38.54 4.37
954 969 5.822132 AACAAATCCAAATGTGATGGGAA 57.178 34.783 0.00 0.00 38.54 3.97
955 970 5.822132 ACAAATCCAAATGTGATGGGAAA 57.178 34.783 0.00 0.00 38.54 3.13
992 1007 2.087462 AAAGAAACGCTGGCCAAGGC 62.087 55.000 7.01 6.95 41.06 4.35
1018 1033 0.998727 CAAAGCCGAAGAAACGCAGC 60.999 55.000 0.00 0.00 0.00 5.25
1035 1051 4.025401 CTCGCCCGGCAACACAAC 62.025 66.667 10.77 0.00 0.00 3.32
1042 1058 1.199097 CCCGGCAACACAACTGTATTC 59.801 52.381 0.00 0.00 0.00 1.75
1044 1060 2.151202 CGGCAACACAACTGTATTCCT 58.849 47.619 0.00 0.00 0.00 3.36
1062 1078 2.158325 TCCTTCCCAACAAAAGATGGCT 60.158 45.455 0.00 0.00 35.28 4.75
1143 1162 2.833582 GGCCTCATCGAGTCCGGA 60.834 66.667 0.00 0.00 36.24 5.14
1177 1196 2.050350 CCGCTCTTCCTCGTACCCA 61.050 63.158 0.00 0.00 0.00 4.51
1184 1209 0.907704 TTCCTCGTACCCAGCACCAT 60.908 55.000 0.00 0.00 0.00 3.55
1206 1231 4.820744 CCCTCCCCACCGCCATTG 62.821 72.222 0.00 0.00 0.00 2.82
1211 1236 2.124570 CCCACCGCCATTGGAGAG 60.125 66.667 6.95 0.10 36.02 3.20
1219 1244 0.105593 GCCATTGGAGAGCGAGATCA 59.894 55.000 6.95 0.00 0.00 2.92
1272 1297 2.672908 CACTCATCCAGCCTGCCA 59.327 61.111 0.00 0.00 0.00 4.92
1333 1358 4.953868 CCAACCACGGCGTCGACA 62.954 66.667 20.03 0.00 40.11 4.35
1383 1408 3.458163 CGGGCCTTCCACGAGCTA 61.458 66.667 0.84 0.00 34.36 3.32
1598 1626 2.578163 TACCAGCTGCTCATGACGGC 62.578 60.000 8.66 16.65 39.82 5.68
1689 1717 2.338785 GCAGGTGGAAGGCTTGCTC 61.339 63.158 19.72 15.62 0.00 4.26
1782 1810 2.125912 CTCTTCACCGTCCTGGCG 60.126 66.667 3.95 3.95 43.94 5.69
1925 1953 2.992543 GCTCTGTAGAAGTGAACTGCTG 59.007 50.000 0.83 0.00 32.96 4.41
1928 1956 1.071605 GTAGAAGTGAACTGCTGCCG 58.928 55.000 0.83 0.00 32.96 5.69
2027 2055 2.057922 ACAGGGTGGTGATCAAGTCTT 58.942 47.619 0.00 0.00 0.00 3.01
2030 2058 2.154462 GGGTGGTGATCAAGTCTTGTG 58.846 52.381 12.30 0.00 0.00 3.33
2038 2066 3.681417 TGATCAAGTCTTGTGAAGATGCG 59.319 43.478 12.30 0.00 40.18 4.73
2065 2093 5.452777 GTGTCCATTGCACTCTTCTTTAAC 58.547 41.667 0.00 0.00 34.30 2.01
2169 2197 2.564504 TCACCCTGACAGAGTTCATGAG 59.435 50.000 3.32 0.00 0.00 2.90
2211 2239 1.003839 GCACCAAGTCCATCGACCA 60.004 57.895 0.00 0.00 40.12 4.02
2236 2264 5.678132 TCAGGATTGCACATGAATAATCG 57.322 39.130 0.00 0.00 31.89 3.34
2293 2342 2.285977 GTTTGTCAGGACGAACTTGGT 58.714 47.619 20.29 0.00 46.90 3.67
2367 2437 9.303116 ACCTCACATAATATAGTACTCTTGGAG 57.697 37.037 0.00 0.00 35.52 3.86
2368 2438 9.303116 CCTCACATAATATAGTACTCTTGGAGT 57.697 37.037 0.00 5.52 45.54 3.85
2394 2464 6.533730 TGTTTATGATATTTGAGCTCGGGAT 58.466 36.000 9.64 5.44 0.00 3.85
2407 2477 3.633065 AGCTCGGGATTAGAGTAACACTC 59.367 47.826 0.00 0.00 45.38 3.51
2449 2519 7.582435 AACTTGACATCTACATGTAAACGAG 57.418 36.000 7.06 8.11 43.79 4.18
2468 2538 4.142491 ACGAGACTTCTCTCTTGTGCTATG 60.142 45.833 4.76 0.00 40.96 2.23
2507 2577 1.269723 GTCTGCAAAACCAAGGTAGGC 59.730 52.381 0.00 0.00 0.00 3.93
2611 2682 0.980423 AGTTCTCCTTGAGCCACTCC 59.020 55.000 0.00 0.00 0.00 3.85
2734 2805 3.885901 GAGGGAGATAATTTCCTTGGCAC 59.114 47.826 0.00 0.00 35.01 5.01
2755 2826 4.000988 ACTGCCTTGGTTCACTTAATACG 58.999 43.478 0.00 0.00 0.00 3.06
2756 2827 4.250464 CTGCCTTGGTTCACTTAATACGA 58.750 43.478 0.00 0.00 0.00 3.43
2757 2828 4.250464 TGCCTTGGTTCACTTAATACGAG 58.750 43.478 0.00 0.00 0.00 4.18
2779 2850 3.433306 ACTAGGCATGGCTGTTTAACA 57.567 42.857 30.53 8.73 0.00 2.41
2817 2888 7.789831 TCTGTGGGGATTTAACTATCATCTAGT 59.210 37.037 0.00 0.00 0.00 2.57
2818 2889 7.735917 TGTGGGGATTTAACTATCATCTAGTG 58.264 38.462 0.00 0.00 0.00 2.74
2839 2910 9.423427 CTAGTGCGTATATATTTTAGTAGCGAG 57.577 37.037 0.00 0.00 0.00 5.03
2843 2919 7.094677 TGCGTATATATTTTAGTAGCGAGGTCA 60.095 37.037 0.00 0.00 0.00 4.02
2959 3035 0.322816 GCTGCTTGATGTTCCCCTCA 60.323 55.000 0.00 0.00 0.00 3.86
3039 3115 0.596577 TGGTCTGTCGAGTACTGCAC 59.403 55.000 0.00 0.00 0.00 4.57
3041 3117 0.454620 GTCTGTCGAGTACTGCACGG 60.455 60.000 0.00 1.39 0.00 4.94
3064 3140 6.208644 GGTGATATGTTGTTAATGCATGGAC 58.791 40.000 0.00 2.57 0.00 4.02
3068 3146 7.975058 TGATATGTTGTTAATGCATGGACAAAG 59.025 33.333 22.40 0.00 34.20 2.77
3081 3159 1.535462 GGACAAAGAATGTGTGGACCG 59.465 52.381 0.00 0.00 36.03 4.79
3106 3187 6.752815 GGAAGTCAAAAGTAGAGGTTCTATCG 59.247 42.308 0.00 0.00 30.76 2.92
3126 3207 3.123453 TCGCTCGAATCACAAATGAACAG 59.877 43.478 0.00 0.00 38.69 3.16
3181 3262 6.158598 CCTTGAATATTTCACCAACAACCAG 58.841 40.000 0.00 0.00 39.87 4.00
3245 3326 0.816373 GGTACTCCTGGACCGACTTC 59.184 60.000 0.00 0.00 0.00 3.01
3290 3371 3.680458 GGTCTTTGTCTAGCTTCCTTTCG 59.320 47.826 0.00 0.00 0.00 3.46
3296 3377 1.078426 TAGCTTCCTTTCGGCCTGC 60.078 57.895 0.00 0.00 0.00 4.85
3297 3378 2.852495 TAGCTTCCTTTCGGCCTGCG 62.852 60.000 0.00 0.00 0.00 5.18
3302 3383 2.438434 CTTTCGGCCTGCGGGAAT 60.438 61.111 18.31 0.00 33.58 3.01
3351 3432 9.433153 AGATACAAAAGCTAACCTAGTGTTAAC 57.567 33.333 0.00 0.00 38.91 2.01
3352 3433 9.433153 GATACAAAAGCTAACCTAGTGTTAACT 57.567 33.333 7.22 4.21 38.91 2.24
3353 3434 7.492352 ACAAAAGCTAACCTAGTGTTAACTG 57.508 36.000 7.22 0.00 38.91 3.16
3354 3435 6.017357 ACAAAAGCTAACCTAGTGTTAACTGC 60.017 38.462 7.22 0.00 38.91 4.40
3355 3436 5.485209 AAGCTAACCTAGTGTTAACTGCT 57.515 39.130 7.22 7.70 39.06 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.770040 CATCCTCGTCGGGCCACA 61.770 66.667 4.39 0.00 0.00 4.17
4 5 3.718210 GACATCCTCGTCGGGCCAC 62.718 68.421 4.39 0.00 0.00 5.01
5 6 3.458163 GACATCCTCGTCGGGCCA 61.458 66.667 4.39 0.00 0.00 5.36
11 12 2.190756 AGGAACCGACATCCTCGTC 58.809 57.895 0.00 0.00 44.01 4.20
12 13 4.436368 AGGAACCGACATCCTCGT 57.564 55.556 0.00 0.00 44.01 4.18
16 17 1.134965 CACTCAGAGGAACCGACATCC 60.135 57.143 1.53 0.00 37.22 3.51
17 18 1.134965 CCACTCAGAGGAACCGACATC 60.135 57.143 1.53 0.00 0.00 3.06
18 19 0.898320 CCACTCAGAGGAACCGACAT 59.102 55.000 1.53 0.00 0.00 3.06
19 20 1.185618 CCCACTCAGAGGAACCGACA 61.186 60.000 1.53 0.00 0.00 4.35
20 21 1.592223 CCCACTCAGAGGAACCGAC 59.408 63.158 1.53 0.00 0.00 4.79
21 22 1.609501 CCCCACTCAGAGGAACCGA 60.610 63.158 1.53 0.00 0.00 4.69
22 23 2.660064 CCCCCACTCAGAGGAACCG 61.660 68.421 1.53 0.00 0.00 4.44
23 24 1.539124 ACCCCCACTCAGAGGAACC 60.539 63.158 1.53 0.00 0.00 3.62
24 25 1.128188 ACACCCCCACTCAGAGGAAC 61.128 60.000 1.53 0.00 0.00 3.62
25 26 0.490017 TACACCCCCACTCAGAGGAA 59.510 55.000 1.53 0.00 0.00 3.36
26 27 0.716591 ATACACCCCCACTCAGAGGA 59.283 55.000 1.53 0.00 0.00 3.71
27 28 0.833287 CATACACCCCCACTCAGAGG 59.167 60.000 1.53 0.00 0.00 3.69
28 29 1.208052 CACATACACCCCCACTCAGAG 59.792 57.143 0.00 0.00 0.00 3.35
29 30 1.203250 TCACATACACCCCCACTCAGA 60.203 52.381 0.00 0.00 0.00 3.27
30 31 1.275666 TCACATACACCCCCACTCAG 58.724 55.000 0.00 0.00 0.00 3.35
31 32 1.965414 ATCACATACACCCCCACTCA 58.035 50.000 0.00 0.00 0.00 3.41
32 33 2.224305 GCTATCACATACACCCCCACTC 60.224 54.545 0.00 0.00 0.00 3.51
33 34 1.768870 GCTATCACATACACCCCCACT 59.231 52.381 0.00 0.00 0.00 4.00
34 35 1.202770 GGCTATCACATACACCCCCAC 60.203 57.143 0.00 0.00 0.00 4.61
35 36 1.136828 GGCTATCACATACACCCCCA 58.863 55.000 0.00 0.00 0.00 4.96
36 37 1.072331 CAGGCTATCACATACACCCCC 59.928 57.143 0.00 0.00 0.00 5.40
37 38 1.072331 CCAGGCTATCACATACACCCC 59.928 57.143 0.00 0.00 0.00 4.95
38 39 1.543429 GCCAGGCTATCACATACACCC 60.543 57.143 3.29 0.00 0.00 4.61
39 40 1.417890 AGCCAGGCTATCACATACACC 59.582 52.381 14.18 0.00 36.99 4.16
40 41 2.918712 AGCCAGGCTATCACATACAC 57.081 50.000 14.18 0.00 36.99 2.90
41 42 5.567037 AATAAGCCAGGCTATCACATACA 57.433 39.130 16.56 0.00 38.25 2.29
42 43 6.109359 CCTAATAAGCCAGGCTATCACATAC 58.891 44.000 16.56 0.00 38.25 2.39
43 44 5.189736 CCCTAATAAGCCAGGCTATCACATA 59.810 44.000 16.56 1.96 38.25 2.29
44 45 4.018960 CCCTAATAAGCCAGGCTATCACAT 60.019 45.833 16.56 0.00 38.25 3.21
45 46 3.327757 CCCTAATAAGCCAGGCTATCACA 59.672 47.826 16.56 0.00 38.25 3.58
46 47 3.583086 TCCCTAATAAGCCAGGCTATCAC 59.417 47.826 16.56 0.00 38.25 3.06
47 48 3.869310 TCCCTAATAAGCCAGGCTATCA 58.131 45.455 16.56 3.24 38.25 2.15
48 49 4.471386 TCATCCCTAATAAGCCAGGCTATC 59.529 45.833 16.56 0.00 38.25 2.08
49 50 4.438913 TCATCCCTAATAAGCCAGGCTAT 58.561 43.478 16.56 6.98 38.25 2.97
50 51 3.869310 TCATCCCTAATAAGCCAGGCTA 58.131 45.455 16.56 3.52 38.25 3.93
51 52 2.706350 TCATCCCTAATAAGCCAGGCT 58.294 47.619 8.70 8.70 42.56 4.58
52 53 3.728385 ATCATCCCTAATAAGCCAGGC 57.272 47.619 1.84 1.84 0.00 4.85
53 54 5.723887 AGTCTATCATCCCTAATAAGCCAGG 59.276 44.000 0.00 0.00 0.00 4.45
54 55 6.865834 AGTCTATCATCCCTAATAAGCCAG 57.134 41.667 0.00 0.00 0.00 4.85
55 56 7.479579 AGTAGTCTATCATCCCTAATAAGCCA 58.520 38.462 0.00 0.00 0.00 4.75
56 57 7.616150 TGAGTAGTCTATCATCCCTAATAAGCC 59.384 40.741 0.00 0.00 0.00 4.35
57 58 8.582657 TGAGTAGTCTATCATCCCTAATAAGC 57.417 38.462 0.00 0.00 0.00 3.09
92 93 3.017442 CTCCCGGAAAAGAAGGAATTCC 58.983 50.000 17.31 17.31 39.38 3.01
93 94 2.423892 GCTCCCGGAAAAGAAGGAATTC 59.576 50.000 0.73 0.00 0.00 2.17
94 95 2.447443 GCTCCCGGAAAAGAAGGAATT 58.553 47.619 0.73 0.00 0.00 2.17
95 96 1.341089 GGCTCCCGGAAAAGAAGGAAT 60.341 52.381 0.73 0.00 0.00 3.01
96 97 0.037734 GGCTCCCGGAAAAGAAGGAA 59.962 55.000 0.73 0.00 0.00 3.36
97 98 1.683441 GGCTCCCGGAAAAGAAGGA 59.317 57.895 0.73 0.00 0.00 3.36
98 99 1.378646 GGGCTCCCGGAAAAGAAGG 60.379 63.158 0.73 0.00 0.00 3.46
99 100 0.034089 ATGGGCTCCCGGAAAAGAAG 60.034 55.000 0.73 0.00 39.42 2.85
100 101 0.407918 AATGGGCTCCCGGAAAAGAA 59.592 50.000 0.73 0.00 39.42 2.52
101 102 0.034477 GAATGGGCTCCCGGAAAAGA 60.034 55.000 0.73 0.00 39.42 2.52
102 103 1.376609 CGAATGGGCTCCCGGAAAAG 61.377 60.000 0.73 0.00 39.42 2.27
103 104 1.377987 CGAATGGGCTCCCGGAAAA 60.378 57.895 0.73 0.00 39.42 2.29
104 105 2.270850 CGAATGGGCTCCCGGAAA 59.729 61.111 0.73 0.00 39.42 3.13
105 106 3.792736 CCGAATGGGCTCCCGGAA 61.793 66.667 0.73 0.00 44.29 4.30
107 108 4.547367 GTCCGAATGGGCTCCCGG 62.547 72.222 0.00 0.00 43.02 5.73
108 109 3.740128 CTGTCCGAATGGGCTCCCG 62.740 68.421 0.00 0.00 41.88 5.14
109 110 1.910580 TTCTGTCCGAATGGGCTCCC 61.911 60.000 0.00 0.00 41.88 4.30
110 111 0.181350 ATTCTGTCCGAATGGGCTCC 59.819 55.000 0.00 0.00 41.88 4.70
111 112 1.943340 GAATTCTGTCCGAATGGGCTC 59.057 52.381 0.00 0.00 41.42 4.70
112 113 1.408822 GGAATTCTGTCCGAATGGGCT 60.409 52.381 5.23 0.00 41.42 5.19
113 114 1.025041 GGAATTCTGTCCGAATGGGC 58.975 55.000 5.23 0.00 41.42 5.36
114 115 2.418368 TGGAATTCTGTCCGAATGGG 57.582 50.000 5.23 0.00 41.42 4.00
115 116 3.758554 ACTTTGGAATTCTGTCCGAATGG 59.241 43.478 5.23 0.00 41.42 3.16
116 117 5.376854 AACTTTGGAATTCTGTCCGAATG 57.623 39.130 5.23 0.00 41.42 2.67
117 118 6.349363 GCTTAACTTTGGAATTCTGTCCGAAT 60.349 38.462 5.23 0.00 44.10 3.34
118 119 5.048991 GCTTAACTTTGGAATTCTGTCCGAA 60.049 40.000 5.23 0.00 40.96 4.30
119 120 4.454504 GCTTAACTTTGGAATTCTGTCCGA 59.545 41.667 5.23 0.00 40.96 4.55
120 121 4.669197 CGCTTAACTTTGGAATTCTGTCCG 60.669 45.833 5.23 0.00 40.96 4.79
121 122 4.215613 ACGCTTAACTTTGGAATTCTGTCC 59.784 41.667 5.23 0.00 38.27 4.02
122 123 5.147162 CACGCTTAACTTTGGAATTCTGTC 58.853 41.667 5.23 0.00 0.00 3.51
123 124 4.556699 GCACGCTTAACTTTGGAATTCTGT 60.557 41.667 5.23 0.00 0.00 3.41
124 125 3.914364 GCACGCTTAACTTTGGAATTCTG 59.086 43.478 5.23 0.00 0.00 3.02
125 126 3.821033 AGCACGCTTAACTTTGGAATTCT 59.179 39.130 5.23 0.00 0.00 2.40
126 127 4.159120 GAGCACGCTTAACTTTGGAATTC 58.841 43.478 0.00 0.00 0.00 2.17
127 128 3.568007 TGAGCACGCTTAACTTTGGAATT 59.432 39.130 0.00 0.00 0.00 2.17
128 129 3.146066 TGAGCACGCTTAACTTTGGAAT 58.854 40.909 0.00 0.00 0.00 3.01
129 130 2.548057 CTGAGCACGCTTAACTTTGGAA 59.452 45.455 0.00 0.00 0.00 3.53
130 131 2.143122 CTGAGCACGCTTAACTTTGGA 58.857 47.619 0.00 0.00 0.00 3.53
131 132 1.197721 CCTGAGCACGCTTAACTTTGG 59.802 52.381 0.00 0.00 0.00 3.28
132 133 1.197721 CCCTGAGCACGCTTAACTTTG 59.802 52.381 0.00 0.00 0.00 2.77
133 134 1.523758 CCCTGAGCACGCTTAACTTT 58.476 50.000 0.00 0.00 0.00 2.66
134 135 0.321653 CCCCTGAGCACGCTTAACTT 60.322 55.000 0.00 0.00 0.00 2.66
135 136 1.296715 CCCCTGAGCACGCTTAACT 59.703 57.895 0.00 0.00 0.00 2.24
136 137 0.248289 TACCCCTGAGCACGCTTAAC 59.752 55.000 0.00 0.00 0.00 2.01
137 138 0.535335 CTACCCCTGAGCACGCTTAA 59.465 55.000 0.00 0.00 0.00 1.85
138 139 0.613853 ACTACCCCTGAGCACGCTTA 60.614 55.000 0.00 0.00 0.00 3.09
139 140 1.481056 AACTACCCCTGAGCACGCTT 61.481 55.000 0.00 0.00 0.00 4.68
140 141 1.481056 AAACTACCCCTGAGCACGCT 61.481 55.000 0.00 0.00 0.00 5.07
141 142 1.003718 AAACTACCCCTGAGCACGC 60.004 57.895 0.00 0.00 0.00 5.34
142 143 0.320374 TGAAACTACCCCTGAGCACG 59.680 55.000 0.00 0.00 0.00 5.34
143 144 1.339151 CCTGAAACTACCCCTGAGCAC 60.339 57.143 0.00 0.00 0.00 4.40
144 145 0.984230 CCTGAAACTACCCCTGAGCA 59.016 55.000 0.00 0.00 0.00 4.26
145 146 1.276622 TCCTGAAACTACCCCTGAGC 58.723 55.000 0.00 0.00 0.00 4.26
146 147 2.171448 CCATCCTGAAACTACCCCTGAG 59.829 54.545 0.00 0.00 0.00 3.35
147 148 2.196595 CCATCCTGAAACTACCCCTGA 58.803 52.381 0.00 0.00 0.00 3.86
148 149 1.212935 CCCATCCTGAAACTACCCCTG 59.787 57.143 0.00 0.00 0.00 4.45
149 150 1.203570 ACCCATCCTGAAACTACCCCT 60.204 52.381 0.00 0.00 0.00 4.79
150 151 1.064685 CACCCATCCTGAAACTACCCC 60.065 57.143 0.00 0.00 0.00 4.95
151 152 1.913419 TCACCCATCCTGAAACTACCC 59.087 52.381 0.00 0.00 0.00 3.69
152 153 2.572104 AGTCACCCATCCTGAAACTACC 59.428 50.000 0.00 0.00 0.00 3.18
153 154 3.260884 TCAGTCACCCATCCTGAAACTAC 59.739 47.826 0.00 0.00 32.55 2.73
154 155 3.260884 GTCAGTCACCCATCCTGAAACTA 59.739 47.826 0.00 0.00 37.01 2.24
155 156 2.039084 GTCAGTCACCCATCCTGAAACT 59.961 50.000 0.00 0.00 37.01 2.66
156 157 2.427506 GTCAGTCACCCATCCTGAAAC 58.572 52.381 0.00 0.00 37.01 2.78
157 158 1.351017 GGTCAGTCACCCATCCTGAAA 59.649 52.381 0.00 0.00 39.69 2.69
158 159 0.984230 GGTCAGTCACCCATCCTGAA 59.016 55.000 0.00 0.00 39.69 3.02
159 160 1.257750 CGGTCAGTCACCCATCCTGA 61.258 60.000 0.00 0.00 43.31 3.86
160 161 1.219124 CGGTCAGTCACCCATCCTG 59.781 63.158 0.00 0.00 43.31 3.86
161 162 1.990060 CCGGTCAGTCACCCATCCT 60.990 63.158 0.00 0.00 43.31 3.24
162 163 2.584608 CCGGTCAGTCACCCATCC 59.415 66.667 0.00 0.00 43.31 3.51
163 164 1.550130 TTCCCGGTCAGTCACCCATC 61.550 60.000 0.00 0.00 43.31 3.51
164 165 1.131303 TTTCCCGGTCAGTCACCCAT 61.131 55.000 0.00 0.00 43.31 4.00
165 166 1.131303 ATTTCCCGGTCAGTCACCCA 61.131 55.000 0.00 0.00 43.31 4.51
166 167 0.037734 AATTTCCCGGTCAGTCACCC 59.962 55.000 0.00 0.00 43.31 4.61
167 168 2.027469 AGTAATTTCCCGGTCAGTCACC 60.027 50.000 0.00 0.00 42.69 4.02
168 169 3.259902 GAGTAATTTCCCGGTCAGTCAC 58.740 50.000 0.00 0.00 0.00 3.67
169 170 2.235402 GGAGTAATTTCCCGGTCAGTCA 59.765 50.000 0.00 0.00 0.00 3.41
170 171 2.419713 GGGAGTAATTTCCCGGTCAGTC 60.420 54.545 0.00 0.00 46.99 3.51
171 172 1.558294 GGGAGTAATTTCCCGGTCAGT 59.442 52.381 0.00 0.00 46.99 3.41
172 173 2.327200 GGGAGTAATTTCCCGGTCAG 57.673 55.000 0.00 0.00 46.99 3.51
179 180 2.092323 GTGCACCTGGGAGTAATTTCC 58.908 52.381 5.22 0.00 36.46 3.13
180 181 2.488153 GTGTGCACCTGGGAGTAATTTC 59.512 50.000 15.69 0.00 0.00 2.17
181 182 2.514803 GTGTGCACCTGGGAGTAATTT 58.485 47.619 15.69 0.00 0.00 1.82
182 183 1.610624 CGTGTGCACCTGGGAGTAATT 60.611 52.381 15.69 0.00 0.00 1.40
183 184 0.036388 CGTGTGCACCTGGGAGTAAT 60.036 55.000 15.69 0.00 0.00 1.89
184 185 1.369692 CGTGTGCACCTGGGAGTAA 59.630 57.895 15.69 0.00 0.00 2.24
185 186 2.579657 CCGTGTGCACCTGGGAGTA 61.580 63.158 15.69 0.00 0.00 2.59
186 187 3.941188 CCGTGTGCACCTGGGAGT 61.941 66.667 15.69 0.00 0.00 3.85
187 188 4.704833 CCCGTGTGCACCTGGGAG 62.705 72.222 30.37 10.93 44.88 4.30
190 191 4.248842 TCACCCGTGTGCACCTGG 62.249 66.667 15.69 15.65 42.46 4.45
191 192 2.666190 CTCACCCGTGTGCACCTG 60.666 66.667 15.69 6.40 42.46 4.00
192 193 3.941188 CCTCACCCGTGTGCACCT 61.941 66.667 15.69 0.00 42.46 4.00
193 194 3.936203 TCCTCACCCGTGTGCACC 61.936 66.667 15.69 4.74 42.46 5.01
194 195 2.665185 GTCCTCACCCGTGTGCAC 60.665 66.667 10.75 10.75 42.46 4.57
195 196 2.258748 TTTGTCCTCACCCGTGTGCA 62.259 55.000 0.00 0.00 42.46 4.57
196 197 1.507141 CTTTGTCCTCACCCGTGTGC 61.507 60.000 0.00 0.00 42.46 4.57
197 198 0.179056 ACTTTGTCCTCACCCGTGTG 60.179 55.000 0.00 0.00 44.18 3.82
198 199 0.179056 CACTTTGTCCTCACCCGTGT 60.179 55.000 0.00 0.00 0.00 4.49
199 200 1.507141 GCACTTTGTCCTCACCCGTG 61.507 60.000 0.00 0.00 0.00 4.94
200 201 1.227853 GCACTTTGTCCTCACCCGT 60.228 57.895 0.00 0.00 0.00 5.28
201 202 2.317609 CGCACTTTGTCCTCACCCG 61.318 63.158 0.00 0.00 0.00 5.28
202 203 2.617274 GCGCACTTTGTCCTCACCC 61.617 63.158 0.30 0.00 0.00 4.61
203 204 1.845809 CTGCGCACTTTGTCCTCACC 61.846 60.000 5.66 0.00 0.00 4.02
204 205 0.880278 TCTGCGCACTTTGTCCTCAC 60.880 55.000 5.66 0.00 0.00 3.51
205 206 0.179059 TTCTGCGCACTTTGTCCTCA 60.179 50.000 5.66 0.00 0.00 3.86
206 207 0.944386 TTTCTGCGCACTTTGTCCTC 59.056 50.000 5.66 0.00 0.00 3.71
207 208 1.334869 CTTTTCTGCGCACTTTGTCCT 59.665 47.619 5.66 0.00 0.00 3.85
208 209 1.333619 TCTTTTCTGCGCACTTTGTCC 59.666 47.619 5.66 0.00 0.00 4.02
209 210 2.032178 AGTCTTTTCTGCGCACTTTGTC 59.968 45.455 5.66 0.00 0.00 3.18
210 211 2.017049 AGTCTTTTCTGCGCACTTTGT 58.983 42.857 5.66 0.00 0.00 2.83
211 212 2.763249 AGTCTTTTCTGCGCACTTTG 57.237 45.000 5.66 0.00 0.00 2.77
212 213 3.467803 ACTAGTCTTTTCTGCGCACTTT 58.532 40.909 5.66 0.00 0.00 2.66
213 214 3.113260 ACTAGTCTTTTCTGCGCACTT 57.887 42.857 5.66 0.00 0.00 3.16
214 215 2.821991 ACTAGTCTTTTCTGCGCACT 57.178 45.000 5.66 2.15 0.00 4.40
215 216 4.625742 TCAATACTAGTCTTTTCTGCGCAC 59.374 41.667 5.66 0.00 0.00 5.34
216 217 4.816392 TCAATACTAGTCTTTTCTGCGCA 58.184 39.130 10.98 10.98 0.00 6.09
217 218 5.751028 AGATCAATACTAGTCTTTTCTGCGC 59.249 40.000 0.00 0.00 0.00 6.09
218 219 6.754209 ACAGATCAATACTAGTCTTTTCTGCG 59.246 38.462 20.08 7.76 33.16 5.18
219 220 7.010923 CCACAGATCAATACTAGTCTTTTCTGC 59.989 40.741 20.08 1.61 33.16 4.26
220 221 7.493971 CCCACAGATCAATACTAGTCTTTTCTG 59.506 40.741 19.27 19.27 35.40 3.02
221 222 7.365117 CCCCACAGATCAATACTAGTCTTTTCT 60.365 40.741 0.00 0.00 0.00 2.52
222 223 6.763610 CCCCACAGATCAATACTAGTCTTTTC 59.236 42.308 0.00 0.00 0.00 2.29
223 224 6.653989 CCCCACAGATCAATACTAGTCTTTT 58.346 40.000 0.00 0.00 0.00 2.27
224 225 5.396884 GCCCCACAGATCAATACTAGTCTTT 60.397 44.000 0.00 0.00 0.00 2.52
225 226 4.101741 GCCCCACAGATCAATACTAGTCTT 59.898 45.833 0.00 0.00 0.00 3.01
226 227 3.643792 GCCCCACAGATCAATACTAGTCT 59.356 47.826 0.00 0.00 0.00 3.24
227 228 3.244249 GGCCCCACAGATCAATACTAGTC 60.244 52.174 0.00 0.00 0.00 2.59
228 229 2.706190 GGCCCCACAGATCAATACTAGT 59.294 50.000 0.00 0.00 0.00 2.57
229 230 2.705658 TGGCCCCACAGATCAATACTAG 59.294 50.000 0.00 0.00 0.00 2.57
230 231 2.705658 CTGGCCCCACAGATCAATACTA 59.294 50.000 0.00 0.00 40.97 1.82
231 232 1.492176 CTGGCCCCACAGATCAATACT 59.508 52.381 0.00 0.00 40.97 2.12
232 233 1.212935 ACTGGCCCCACAGATCAATAC 59.787 52.381 0.00 0.00 40.97 1.89
233 234 1.490490 GACTGGCCCCACAGATCAATA 59.510 52.381 0.00 0.00 40.97 1.90
234 235 0.257039 GACTGGCCCCACAGATCAAT 59.743 55.000 0.00 0.00 40.97 2.57
235 236 0.842030 AGACTGGCCCCACAGATCAA 60.842 55.000 0.00 0.00 40.97 2.57
236 237 0.042581 TAGACTGGCCCCACAGATCA 59.957 55.000 0.00 0.00 40.97 2.92
237 238 0.755686 CTAGACTGGCCCCACAGATC 59.244 60.000 0.00 0.00 40.97 2.75
238 239 0.339859 TCTAGACTGGCCCCACAGAT 59.660 55.000 0.00 0.00 40.97 2.90
239 240 0.339859 ATCTAGACTGGCCCCACAGA 59.660 55.000 0.00 0.00 40.97 3.41
240 241 0.755686 GATCTAGACTGGCCCCACAG 59.244 60.000 0.00 0.00 44.03 3.66
241 242 0.691078 GGATCTAGACTGGCCCCACA 60.691 60.000 0.00 0.00 0.00 4.17
242 243 1.411651 GGGATCTAGACTGGCCCCAC 61.412 65.000 0.00 0.00 34.10 4.61
243 244 1.074471 GGGATCTAGACTGGCCCCA 60.074 63.158 0.00 0.00 34.10 4.96
244 245 2.210711 CGGGATCTAGACTGGCCCC 61.211 68.421 0.00 9.76 35.30 5.80
245 246 2.873525 GCGGGATCTAGACTGGCCC 61.874 68.421 0.00 3.13 35.40 5.80
246 247 2.737830 GCGGGATCTAGACTGGCC 59.262 66.667 0.00 0.00 0.00 5.36
247 248 2.093537 CTGGCGGGATCTAGACTGGC 62.094 65.000 8.37 8.37 38.85 4.85
248 249 1.467678 CCTGGCGGGATCTAGACTGG 61.468 65.000 6.48 5.63 37.23 4.00
249 250 0.468214 TCCTGGCGGGATCTAGACTG 60.468 60.000 12.08 0.00 39.58 3.51
250 251 0.178975 CTCCTGGCGGGATCTAGACT 60.179 60.000 17.09 0.00 44.15 3.24
251 252 0.468400 ACTCCTGGCGGGATCTAGAC 60.468 60.000 17.09 0.00 44.15 2.59
252 253 1.146452 TACTCCTGGCGGGATCTAGA 58.854 55.000 17.09 0.00 44.15 2.43
253 254 1.614413 GTTACTCCTGGCGGGATCTAG 59.386 57.143 17.09 6.66 44.15 2.43
254 255 1.700955 GTTACTCCTGGCGGGATCTA 58.299 55.000 17.09 5.66 44.15 1.98
255 256 1.392710 CGTTACTCCTGGCGGGATCT 61.393 60.000 17.09 6.72 44.15 2.75
256 257 1.067582 CGTTACTCCTGGCGGGATC 59.932 63.158 17.09 6.25 44.15 3.36
257 258 1.380785 TCGTTACTCCTGGCGGGAT 60.381 57.895 17.09 8.91 44.15 3.85
258 259 2.036098 TCGTTACTCCTGGCGGGA 59.964 61.111 15.74 15.74 42.77 5.14
259 260 2.183555 GTCGTTACTCCTGGCGGG 59.816 66.667 5.83 5.83 0.00 6.13
260 261 2.183555 GGTCGTTACTCCTGGCGG 59.816 66.667 0.00 0.00 0.00 6.13
261 262 1.445582 GTGGTCGTTACTCCTGGCG 60.446 63.158 0.00 0.00 0.00 5.69
262 263 1.079336 GGTGGTCGTTACTCCTGGC 60.079 63.158 0.00 0.00 0.00 4.85
263 264 0.246635 CAGGTGGTCGTTACTCCTGG 59.753 60.000 13.27 0.00 40.52 4.45
264 265 0.389948 GCAGGTGGTCGTTACTCCTG 60.390 60.000 15.40 15.40 43.62 3.86
265 266 1.874345 CGCAGGTGGTCGTTACTCCT 61.874 60.000 0.00 0.00 32.85 3.69
266 267 1.445582 CGCAGGTGGTCGTTACTCC 60.446 63.158 0.00 0.00 0.00 3.85
267 268 4.164252 CGCAGGTGGTCGTTACTC 57.836 61.111 0.00 0.00 0.00 2.59
280 281 2.047844 CCTCAGACACACCCGCAG 60.048 66.667 0.00 0.00 0.00 5.18
281 282 4.314440 GCCTCAGACACACCCGCA 62.314 66.667 0.00 0.00 0.00 5.69
283 284 2.149803 TAACGCCTCAGACACACCCG 62.150 60.000 0.00 0.00 0.00 5.28
284 285 0.669625 GTAACGCCTCAGACACACCC 60.670 60.000 0.00 0.00 0.00 4.61
285 286 0.032952 TGTAACGCCTCAGACACACC 59.967 55.000 0.00 0.00 0.00 4.16
286 287 1.993370 GATGTAACGCCTCAGACACAC 59.007 52.381 0.00 0.00 0.00 3.82
287 288 1.893137 AGATGTAACGCCTCAGACACA 59.107 47.619 0.00 0.00 0.00 3.72
288 289 2.531206 GAGATGTAACGCCTCAGACAC 58.469 52.381 0.00 0.00 0.00 3.67
289 290 1.476891 GGAGATGTAACGCCTCAGACA 59.523 52.381 0.00 0.00 0.00 3.41
290 291 1.202428 GGGAGATGTAACGCCTCAGAC 60.202 57.143 0.00 0.00 0.00 3.51
291 292 1.112113 GGGAGATGTAACGCCTCAGA 58.888 55.000 0.00 0.00 0.00 3.27
292 293 0.105039 GGGGAGATGTAACGCCTCAG 59.895 60.000 0.00 0.00 36.42 3.35
293 294 0.325296 AGGGGAGATGTAACGCCTCA 60.325 55.000 0.00 0.00 44.16 3.86
294 295 2.517609 AGGGGAGATGTAACGCCTC 58.482 57.895 0.00 0.00 44.16 4.70
295 296 4.809513 AGGGGAGATGTAACGCCT 57.190 55.556 0.00 0.00 43.02 5.52
296 297 0.389757 GAGAGGGGAGATGTAACGCC 59.610 60.000 0.00 0.00 39.01 5.68
297 298 0.030908 CGAGAGGGGAGATGTAACGC 59.969 60.000 0.00 0.00 0.00 4.84
298 299 1.390565 ACGAGAGGGGAGATGTAACG 58.609 55.000 0.00 0.00 0.00 3.18
299 300 2.496470 ACAACGAGAGGGGAGATGTAAC 59.504 50.000 0.00 0.00 0.00 2.50
300 301 2.816411 ACAACGAGAGGGGAGATGTAA 58.184 47.619 0.00 0.00 0.00 2.41
301 302 2.526888 ACAACGAGAGGGGAGATGTA 57.473 50.000 0.00 0.00 0.00 2.29
302 303 1.645710 AACAACGAGAGGGGAGATGT 58.354 50.000 0.00 0.00 0.00 3.06
303 304 3.722147 CATAACAACGAGAGGGGAGATG 58.278 50.000 0.00 0.00 0.00 2.90
304 305 2.103263 GCATAACAACGAGAGGGGAGAT 59.897 50.000 0.00 0.00 0.00 2.75
305 306 1.480954 GCATAACAACGAGAGGGGAGA 59.519 52.381 0.00 0.00 0.00 3.71
306 307 1.207089 TGCATAACAACGAGAGGGGAG 59.793 52.381 0.00 0.00 0.00 4.30
307 308 1.271856 TGCATAACAACGAGAGGGGA 58.728 50.000 0.00 0.00 0.00 4.81
308 309 2.158900 AGATGCATAACAACGAGAGGGG 60.159 50.000 0.00 0.00 0.00 4.79
309 310 3.126831 GAGATGCATAACAACGAGAGGG 58.873 50.000 0.00 0.00 0.00 4.30
310 311 3.126831 GGAGATGCATAACAACGAGAGG 58.873 50.000 0.00 0.00 0.00 3.69
311 312 3.785486 TGGAGATGCATAACAACGAGAG 58.215 45.455 0.00 0.00 0.00 3.20
312 313 3.885724 TGGAGATGCATAACAACGAGA 57.114 42.857 0.00 0.00 0.00 4.04
313 314 3.249320 CCATGGAGATGCATAACAACGAG 59.751 47.826 5.56 0.00 0.00 4.18
314 315 3.118445 TCCATGGAGATGCATAACAACGA 60.118 43.478 11.44 0.00 0.00 3.85
315 316 3.205338 TCCATGGAGATGCATAACAACG 58.795 45.455 11.44 0.00 0.00 4.10
316 317 6.233434 TCTATCCATGGAGATGCATAACAAC 58.767 40.000 21.33 0.00 0.00 3.32
317 318 6.438186 TCTATCCATGGAGATGCATAACAA 57.562 37.500 21.33 0.00 0.00 2.83
318 319 6.442885 AGATCTATCCATGGAGATGCATAACA 59.557 38.462 21.33 0.00 32.47 2.41
319 320 6.887013 AGATCTATCCATGGAGATGCATAAC 58.113 40.000 21.33 5.47 32.47 1.89
320 321 7.336396 CAAGATCTATCCATGGAGATGCATAA 58.664 38.462 21.33 0.00 32.47 1.90
321 322 6.631992 GCAAGATCTATCCATGGAGATGCATA 60.632 42.308 21.39 8.30 32.47 3.14
322 323 5.746284 CAAGATCTATCCATGGAGATGCAT 58.254 41.667 21.33 0.00 32.47 3.96
323 324 4.565028 GCAAGATCTATCCATGGAGATGCA 60.565 45.833 21.39 6.23 32.47 3.96
324 325 3.940221 GCAAGATCTATCCATGGAGATGC 59.060 47.826 21.33 17.34 32.47 3.91
325 326 4.182339 CGCAAGATCTATCCATGGAGATG 58.818 47.826 21.33 11.34 43.02 2.90
326 327 3.837146 ACGCAAGATCTATCCATGGAGAT 59.163 43.478 21.33 17.64 43.62 2.75
327 328 3.006217 CACGCAAGATCTATCCATGGAGA 59.994 47.826 21.33 15.39 43.62 3.71
328 329 3.244009 ACACGCAAGATCTATCCATGGAG 60.244 47.826 21.33 7.68 43.62 3.86
329 330 2.700371 ACACGCAAGATCTATCCATGGA 59.300 45.455 18.88 18.88 43.62 3.41
330 331 2.804527 CACACGCAAGATCTATCCATGG 59.195 50.000 4.97 4.97 43.62 3.66
331 332 2.222678 GCACACGCAAGATCTATCCATG 59.777 50.000 0.00 0.00 43.62 3.66
332 333 2.487934 GCACACGCAAGATCTATCCAT 58.512 47.619 0.00 0.00 43.62 3.41
333 334 1.802508 CGCACACGCAAGATCTATCCA 60.803 52.381 0.00 0.00 43.62 3.41
334 335 0.855349 CGCACACGCAAGATCTATCC 59.145 55.000 0.00 0.00 43.62 2.59
335 336 1.560923 ACGCACACGCAAGATCTATC 58.439 50.000 0.00 0.00 45.53 2.08
336 337 2.357952 TCTACGCACACGCAAGATCTAT 59.642 45.455 0.00 0.00 45.53 1.98
337 338 1.741145 TCTACGCACACGCAAGATCTA 59.259 47.619 0.00 0.00 45.53 1.98
338 339 0.526211 TCTACGCACACGCAAGATCT 59.474 50.000 0.00 0.00 45.53 2.75
339 340 1.346365 TTCTACGCACACGCAAGATC 58.654 50.000 0.00 0.00 45.53 2.75
340 341 2.010145 ATTCTACGCACACGCAAGAT 57.990 45.000 0.00 0.00 45.53 2.40
341 342 1.790755 AATTCTACGCACACGCAAGA 58.209 45.000 0.00 0.00 45.53 3.02
342 343 2.594529 AAATTCTACGCACACGCAAG 57.405 45.000 0.00 0.00 45.53 4.01
343 344 3.341857 AAAAATTCTACGCACACGCAA 57.658 38.095 0.00 0.00 45.53 4.85
362 363 9.334947 TGGAGAACATTGCATGAAAAATAAAAA 57.665 25.926 0.00 0.00 0.00 1.94
363 364 8.899427 TGGAGAACATTGCATGAAAAATAAAA 57.101 26.923 0.00 0.00 0.00 1.52
364 365 8.772705 GTTGGAGAACATTGCATGAAAAATAAA 58.227 29.630 0.00 0.00 31.78 1.40
365 366 7.930325 TGTTGGAGAACATTGCATGAAAAATAA 59.070 29.630 0.00 0.00 37.15 1.40
366 367 7.440198 TGTTGGAGAACATTGCATGAAAAATA 58.560 30.769 0.00 0.00 37.15 1.40
367 368 6.289834 TGTTGGAGAACATTGCATGAAAAAT 58.710 32.000 0.00 0.00 37.15 1.82
368 369 5.668471 TGTTGGAGAACATTGCATGAAAAA 58.332 33.333 0.00 0.00 37.15 1.94
369 370 5.163426 ACTGTTGGAGAACATTGCATGAAAA 60.163 36.000 0.00 0.00 41.33 2.29
370 371 4.341806 ACTGTTGGAGAACATTGCATGAAA 59.658 37.500 0.00 0.00 41.33 2.69
371 372 3.890756 ACTGTTGGAGAACATTGCATGAA 59.109 39.130 0.00 0.00 41.33 2.57
372 373 3.489355 ACTGTTGGAGAACATTGCATGA 58.511 40.909 0.00 0.00 41.33 3.07
373 374 3.253921 TGACTGTTGGAGAACATTGCATG 59.746 43.478 0.00 0.00 41.33 4.06
374 375 3.489355 TGACTGTTGGAGAACATTGCAT 58.511 40.909 0.00 0.00 41.33 3.96
375 376 2.929641 TGACTGTTGGAGAACATTGCA 58.070 42.857 0.00 0.00 41.33 4.08
376 377 3.425359 CGATGACTGTTGGAGAACATTGC 60.425 47.826 0.00 0.00 41.33 3.56
377 378 3.125829 CCGATGACTGTTGGAGAACATTG 59.874 47.826 0.00 0.00 41.33 2.82
378 379 3.338249 CCGATGACTGTTGGAGAACATT 58.662 45.455 0.00 0.00 41.33 2.71
379 380 2.936993 GCCGATGACTGTTGGAGAACAT 60.937 50.000 0.00 0.00 41.33 2.71
380 381 1.608025 GCCGATGACTGTTGGAGAACA 60.608 52.381 0.00 0.00 39.88 3.18
381 382 1.079503 GCCGATGACTGTTGGAGAAC 58.920 55.000 0.00 0.00 0.00 3.01
382 383 0.684535 TGCCGATGACTGTTGGAGAA 59.315 50.000 0.00 0.00 0.00 2.87
383 384 0.904649 ATGCCGATGACTGTTGGAGA 59.095 50.000 0.00 0.00 0.00 3.71
384 385 1.293924 GATGCCGATGACTGTTGGAG 58.706 55.000 0.00 0.00 0.00 3.86
385 386 0.460109 CGATGCCGATGACTGTTGGA 60.460 55.000 0.00 0.00 38.22 3.53
386 387 0.460109 TCGATGCCGATGACTGTTGG 60.460 55.000 0.00 0.00 40.30 3.77
387 388 1.325640 CTTCGATGCCGATGACTGTTG 59.674 52.381 0.00 0.00 45.10 3.33
388 389 1.645034 CTTCGATGCCGATGACTGTT 58.355 50.000 0.00 0.00 45.10 3.16
389 390 0.179100 CCTTCGATGCCGATGACTGT 60.179 55.000 0.00 0.00 45.10 3.55
390 391 0.179100 ACCTTCGATGCCGATGACTG 60.179 55.000 0.00 0.00 45.10 3.51
391 392 0.103208 GACCTTCGATGCCGATGACT 59.897 55.000 0.00 0.00 45.10 3.41
392 393 0.876342 GGACCTTCGATGCCGATGAC 60.876 60.000 0.00 0.00 45.10 3.06
393 394 1.441729 GGACCTTCGATGCCGATGA 59.558 57.895 0.00 0.00 45.10 2.92
394 395 1.951130 CGGACCTTCGATGCCGATG 60.951 63.158 10.54 0.00 46.29 3.84
395 396 1.956629 AACGGACCTTCGATGCCGAT 61.957 55.000 19.35 8.69 46.29 4.18
396 397 2.552585 GAACGGACCTTCGATGCCGA 62.553 60.000 19.35 0.00 46.29 5.54
398 399 1.079405 TGAACGGACCTTCGATGCC 60.079 57.895 0.00 0.00 0.00 4.40
408 409 1.134877 GTTAGTAGCCCCTGAACGGAC 60.135 57.143 0.00 0.00 33.16 4.79
409 410 1.188863 GTTAGTAGCCCCTGAACGGA 58.811 55.000 0.00 0.00 33.16 4.69
411 412 0.179119 CCGTTAGTAGCCCCTGAACG 60.179 60.000 0.00 0.00 41.83 3.95
439 440 1.421480 CTAGGTTGGTACCCCCTAGC 58.579 60.000 28.57 14.77 46.28 3.42
447 449 1.259840 TGGACGGGCTAGGTTGGTAC 61.260 60.000 0.00 0.00 0.00 3.34
451 453 0.828022 TGTATGGACGGGCTAGGTTG 59.172 55.000 0.00 0.00 0.00 3.77
459 461 1.520787 GCCGAAGTGTATGGACGGG 60.521 63.158 0.00 0.00 43.15 5.28
461 463 0.999406 CAAGCCGAAGTGTATGGACG 59.001 55.000 0.00 0.00 0.00 4.79
463 465 0.251916 CCCAAGCCGAAGTGTATGGA 59.748 55.000 0.00 0.00 0.00 3.41
487 489 0.326238 TTACGGAGAATGAGGGCCCT 60.326 55.000 29.18 29.18 0.00 5.19
503 505 0.327191 TCCCCTGGGGTCCATCTTAC 60.327 60.000 30.69 0.00 44.74 2.34
514 516 0.185901 CCCAACATACATCCCCTGGG 59.814 60.000 5.50 5.50 37.74 4.45
519 521 2.092429 TCTTCTGCCCAACATACATCCC 60.092 50.000 0.00 0.00 0.00 3.85
520 522 3.281727 TCTTCTGCCCAACATACATCC 57.718 47.619 0.00 0.00 0.00 3.51
522 524 6.058183 GTCTTATCTTCTGCCCAACATACAT 58.942 40.000 0.00 0.00 0.00 2.29
534 536 3.697045 AGGAGACGTGGTCTTATCTTCTG 59.303 47.826 0.00 0.00 43.53 3.02
535 537 3.697045 CAGGAGACGTGGTCTTATCTTCT 59.303 47.826 0.00 0.00 43.53 2.85
536 538 3.695060 TCAGGAGACGTGGTCTTATCTTC 59.305 47.826 0.00 0.00 43.53 2.87
554 557 3.381908 AGAGTATACGGCAAGTCTTCAGG 59.618 47.826 0.00 0.00 0.00 3.86
576 579 1.217244 GGCGGCGAAAGAGGTCTTA 59.783 57.895 12.98 0.00 34.61 2.10
582 585 0.034059 ATATGGAGGCGGCGAAAGAG 59.966 55.000 12.98 0.00 0.00 2.85
586 589 1.367471 CTGATATGGAGGCGGCGAA 59.633 57.895 12.98 0.00 0.00 4.70
587 590 2.574018 CCTGATATGGAGGCGGCGA 61.574 63.158 12.98 0.00 0.00 5.54
588 591 1.892819 ATCCTGATATGGAGGCGGCG 61.893 60.000 0.51 0.51 39.78 6.46
600 603 6.553852 ACAACTTATAAGGTCGGTATCCTGAT 59.446 38.462 16.73 0.00 35.27 2.90
616 625 9.813826 GTAGGGTATCTAGGGTTACAACTTATA 57.186 37.037 0.00 0.00 0.00 0.98
617 626 7.732140 GGTAGGGTATCTAGGGTTACAACTTAT 59.268 40.741 0.00 0.00 0.00 1.73
618 627 7.069344 GGTAGGGTATCTAGGGTTACAACTTA 58.931 42.308 0.00 0.00 0.00 2.24
619 628 5.901853 GGTAGGGTATCTAGGGTTACAACTT 59.098 44.000 0.00 0.00 0.00 2.66
620 629 5.462240 GGTAGGGTATCTAGGGTTACAACT 58.538 45.833 0.00 0.00 0.00 3.16
621 630 4.590647 GGGTAGGGTATCTAGGGTTACAAC 59.409 50.000 0.00 0.00 0.00 3.32
646 655 8.251721 GCTAAATCCATCGACTTATATACAGGT 58.748 37.037 0.00 0.00 0.00 4.00
648 657 7.707035 GGGCTAAATCCATCGACTTATATACAG 59.293 40.741 0.00 0.00 0.00 2.74
659 668 2.557056 CTCTACGGGCTAAATCCATCGA 59.443 50.000 0.00 0.00 0.00 3.59
661 670 3.320673 CCTCTACGGGCTAAATCCATC 57.679 52.381 0.00 0.00 0.00 3.51
709 719 7.617723 AGATCAGATGTGTTCTAACTCTAAGGT 59.382 37.037 1.72 0.00 31.98 3.50
748 761 7.275183 TGATGGAGATGTTACAATTACAGAGG 58.725 38.462 0.00 0.00 0.00 3.69
761 774 8.844244 GCTCTTGTTTATATTGATGGAGATGTT 58.156 33.333 0.00 0.00 0.00 2.71
796 809 6.394025 ACGCTTTTAATGAAGGTAAAACCA 57.606 33.333 0.00 0.00 41.95 3.67
811 824 6.369340 TGTTTATCCAGATTCGAACGCTTTTA 59.631 34.615 0.00 0.00 0.00 1.52
814 827 4.250464 TGTTTATCCAGATTCGAACGCTT 58.750 39.130 0.00 0.00 0.00 4.68
817 830 4.606232 GCGATGTTTATCCAGATTCGAACG 60.606 45.833 0.00 0.00 0.00 3.95
819 832 3.807622 GGCGATGTTTATCCAGATTCGAA 59.192 43.478 0.00 0.00 0.00 3.71
825 838 1.416401 GGGAGGCGATGTTTATCCAGA 59.584 52.381 0.00 0.00 0.00 3.86
830 843 3.054361 AGAACAAGGGAGGCGATGTTTAT 60.054 43.478 0.00 0.00 36.22 1.40
840 854 4.717280 AGATGGTAACTAGAACAAGGGAGG 59.283 45.833 0.00 0.00 37.61 4.30
864 878 4.383770 GGTCCCGAATTGTAGATCTTGGAA 60.384 45.833 0.00 0.00 0.00 3.53
874 888 2.391678 GAGTAGGGGTCCCGAATTGTA 58.608 52.381 0.48 0.00 41.95 2.41
878 892 1.457079 CGGAGTAGGGGTCCCGAAT 60.457 63.158 0.48 0.00 44.29 3.34
879 893 2.043652 CGGAGTAGGGGTCCCGAA 60.044 66.667 0.48 0.00 44.29 4.30
912 927 1.281419 ACATCATTGGTGTCGGGGTA 58.719 50.000 0.00 0.00 0.00 3.69
915 930 2.705730 TGTTACATCATTGGTGTCGGG 58.294 47.619 5.68 0.00 0.00 5.14
923 938 8.760103 TCACATTTGGATTTGTTACATCATTG 57.240 30.769 0.00 0.00 0.00 2.82
924 939 9.373603 CATCACATTTGGATTTGTTACATCATT 57.626 29.630 0.00 0.00 0.00 2.57
925 940 7.982919 CCATCACATTTGGATTTGTTACATCAT 59.017 33.333 0.00 0.00 36.26 2.45
926 941 7.321908 CCATCACATTTGGATTTGTTACATCA 58.678 34.615 0.00 0.00 36.26 3.07
927 942 6.757947 CCCATCACATTTGGATTTGTTACATC 59.242 38.462 0.00 0.00 36.26 3.06
928 943 6.440010 TCCCATCACATTTGGATTTGTTACAT 59.560 34.615 0.00 0.00 36.26 2.29
929 944 5.777223 TCCCATCACATTTGGATTTGTTACA 59.223 36.000 0.00 0.00 36.26 2.41
930 945 6.279513 TCCCATCACATTTGGATTTGTTAC 57.720 37.500 0.00 0.00 36.26 2.50
931 946 6.924913 TTCCCATCACATTTGGATTTGTTA 57.075 33.333 0.00 0.00 36.26 2.41
932 947 5.822132 TTCCCATCACATTTGGATTTGTT 57.178 34.783 0.00 0.00 36.26 2.83
933 948 5.822132 TTTCCCATCACATTTGGATTTGT 57.178 34.783 0.00 0.00 36.26 2.83
971 986 1.202521 CCTTGGCCAGCGTTTCTTTTT 60.203 47.619 5.11 0.00 0.00 1.94
976 991 2.985847 AGCCTTGGCCAGCGTTTC 60.986 61.111 5.11 0.00 0.00 2.78
977 992 3.297620 CAGCCTTGGCCAGCGTTT 61.298 61.111 5.11 0.00 0.00 3.60
1018 1033 4.025401 GTTGTGTTGCCGGGCGAG 62.025 66.667 15.40 0.00 0.00 5.03
1035 1051 6.350445 CCATCTTTTGTTGGGAAGGAATACAG 60.350 42.308 0.00 0.00 36.03 2.74
1042 1058 2.028748 CAGCCATCTTTTGTTGGGAAGG 60.029 50.000 0.00 0.00 39.18 3.46
1044 1060 1.344114 GCAGCCATCTTTTGTTGGGAA 59.656 47.619 0.00 0.00 39.18 3.97
1062 1078 2.175078 GCGTCGTAGTCGTCTGCA 59.825 61.111 0.00 0.00 41.79 4.41
1132 1151 1.033574 GAGGTGATTCCGGACTCGAT 58.966 55.000 16.19 1.41 41.99 3.59
1172 1191 2.679342 GGGCTGATGGTGCTGGGTA 61.679 63.158 0.00 0.00 0.00 3.69
1177 1196 3.415087 GGAGGGGCTGATGGTGCT 61.415 66.667 0.00 0.00 0.00 4.40
1206 1231 2.288152 GGTGAAGATGATCTCGCTCTCC 60.288 54.545 0.00 0.00 0.00 3.71
1211 1236 2.411904 GGATGGTGAAGATGATCTCGC 58.588 52.381 0.00 0.00 0.00 5.03
1219 1244 0.620556 ACGCTTGGGATGGTGAAGAT 59.379 50.000 0.00 0.00 0.00 2.40
1256 1281 1.908340 GAGTGGCAGGCTGGATGAGT 61.908 60.000 17.64 0.00 0.00 3.41
1383 1408 3.308705 GAACGGACGGTGAGGGGT 61.309 66.667 0.00 0.00 0.00 4.95
1598 1626 1.884926 GCCATCTTCTTCCCGAGCG 60.885 63.158 0.00 0.00 0.00 5.03
1743 1771 4.394712 GGGTCCGTGTGCTCCAGG 62.395 72.222 0.00 0.00 0.00 4.45
1782 1810 3.827898 CCTCCGACTCCGTCCTGC 61.828 72.222 0.00 0.00 0.00 4.85
1791 1819 2.120718 ACCTGAAGCCCTCCGACT 59.879 61.111 0.00 0.00 0.00 4.18
1925 1953 0.597637 CATCGTGGTGGTAGATCGGC 60.598 60.000 0.00 0.00 0.00 5.54
1928 1956 5.844004 AGTAAATCATCGTGGTGGTAGATC 58.156 41.667 0.00 0.00 0.00 2.75
2027 2055 0.037326 GACACCCTCGCATCTTCACA 60.037 55.000 0.00 0.00 0.00 3.58
2030 2058 0.179000 ATGGACACCCTCGCATCTTC 59.821 55.000 0.00 0.00 0.00 2.87
2038 2066 0.326264 AGAGTGCAATGGACACCCTC 59.674 55.000 7.79 0.00 38.87 4.30
2153 2181 2.418471 GGGAGCTCATGAACTCTGTCAG 60.418 54.545 22.14 0.00 33.29 3.51
2155 2183 1.470632 CGGGAGCTCATGAACTCTGTC 60.471 57.143 22.14 12.84 33.29 3.51
2211 2239 6.238566 CGATTATTCATGTGCAATCCTGAACT 60.239 38.462 0.00 0.00 31.47 3.01
2236 2264 1.134946 CCGCACAAATCCTTTGGATCC 59.865 52.381 4.20 4.20 42.27 3.36
2293 2342 6.855763 ATTTCCATTTCTGCCAAGACATAA 57.144 33.333 0.00 0.00 29.98 1.90
2362 2432 9.851686 AGCTCAAATATCATAAACATACTCCAA 57.148 29.630 0.00 0.00 0.00 3.53
2363 2433 9.494271 GAGCTCAAATATCATAAACATACTCCA 57.506 33.333 9.40 0.00 0.00 3.86
2364 2434 8.651588 CGAGCTCAAATATCATAAACATACTCC 58.348 37.037 15.40 0.00 0.00 3.85
2365 2435 8.651588 CCGAGCTCAAATATCATAAACATACTC 58.348 37.037 15.40 0.00 0.00 2.59
2366 2436 7.604164 CCCGAGCTCAAATATCATAAACATACT 59.396 37.037 15.40 0.00 0.00 2.12
2367 2437 7.602644 TCCCGAGCTCAAATATCATAAACATAC 59.397 37.037 15.40 0.00 0.00 2.39
2368 2438 7.676004 TCCCGAGCTCAAATATCATAAACATA 58.324 34.615 15.40 0.00 0.00 2.29
2369 2439 6.533730 TCCCGAGCTCAAATATCATAAACAT 58.466 36.000 15.40 0.00 0.00 2.71
2407 2477 4.548991 AGTTTGCTCTATACGTACCGAG 57.451 45.455 15.17 15.17 0.00 4.63
2414 2484 6.972901 TGTAGATGTCAAGTTTGCTCTATACG 59.027 38.462 0.00 0.00 0.00 3.06
2449 2519 5.473931 TGTTCATAGCACAAGAGAGAAGTC 58.526 41.667 0.00 0.00 0.00 3.01
2468 2538 5.269313 CAGACAGAAGAGTTTGCTTTGTTC 58.731 41.667 0.00 0.00 0.00 3.18
2481 2551 2.951642 CCTTGGTTTTGCAGACAGAAGA 59.048 45.455 11.60 0.00 0.00 2.87
2507 2577 1.294659 GGCGTGCAAACTCTCTCTGG 61.295 60.000 0.00 0.00 0.00 3.86
2575 2646 3.626217 AGAACTGCACGATCGAGTACATA 59.374 43.478 24.34 0.00 0.00 2.29
2611 2682 3.060615 GAGGCTGCCAAGGTGCTG 61.061 66.667 22.65 0.00 0.00 4.41
2659 2730 3.885297 CTCATTCTTTGTCTGTTGTGGGT 59.115 43.478 0.00 0.00 0.00 4.51
2666 2737 6.294397 GCTGGAAAATCTCATTCTTTGTCTGT 60.294 38.462 0.00 0.00 0.00 3.41
2706 2777 6.101881 CCAAGGAAATTATCTCCCTCTACCTT 59.898 42.308 0.00 0.00 34.92 3.50
2711 2782 3.788142 TGCCAAGGAAATTATCTCCCTCT 59.212 43.478 0.00 0.00 32.95 3.69
2712 2783 3.885901 GTGCCAAGGAAATTATCTCCCTC 59.114 47.826 0.00 0.00 32.95 4.30
2734 2805 4.250464 TCGTATTAAGTGAACCAAGGCAG 58.750 43.478 0.00 0.00 0.00 4.85
2755 2826 2.990066 AACAGCCATGCCTAGTACTC 57.010 50.000 0.00 0.00 0.00 2.59
2756 2827 4.019681 TGTTAAACAGCCATGCCTAGTACT 60.020 41.667 0.00 0.00 0.00 2.73
2757 2828 4.258543 TGTTAAACAGCCATGCCTAGTAC 58.741 43.478 0.00 0.00 0.00 2.73
2817 2888 7.094677 TGACCTCGCTACTAAAATATATACGCA 60.095 37.037 0.00 0.00 0.00 5.24
2818 2889 7.217825 GTGACCTCGCTACTAAAATATATACGC 59.782 40.741 0.00 0.00 0.00 4.42
2839 2910 4.455877 CACCCTTTTGATCTTACTGTGACC 59.544 45.833 0.00 0.00 0.00 4.02
2843 2919 4.278419 GCAACACCCTTTTGATCTTACTGT 59.722 41.667 0.00 0.00 0.00 3.55
2921 2997 4.755123 GCAGCAGGTTCTTAACTGTTCTAA 59.245 41.667 0.00 0.00 37.07 2.10
2922 2998 4.040461 AGCAGCAGGTTCTTAACTGTTCTA 59.960 41.667 0.00 0.00 37.07 2.10
2959 3035 7.423199 TCAAACGCTATAATCAAGACTACGAT 58.577 34.615 0.00 0.00 0.00 3.73
3004 3080 0.318762 ACCAGCTCGTCAAGGAAGTC 59.681 55.000 0.00 0.00 0.00 3.01
3039 3115 5.008514 TCCATGCATTAACAACATATCACCG 59.991 40.000 0.00 0.00 0.00 4.94
3041 3117 6.794374 TGTCCATGCATTAACAACATATCAC 58.206 36.000 8.16 0.00 0.00 3.06
3064 3140 1.890876 TCCGGTCCACACATTCTTTG 58.109 50.000 0.00 0.00 0.00 2.77
3068 3146 1.270625 TGACTTCCGGTCCACACATTC 60.271 52.381 0.00 0.00 43.89 2.67
3081 3159 6.752815 CGATAGAACCTCTACTTTTGACTTCC 59.247 42.308 0.00 0.00 30.79 3.46
3106 3187 3.166657 GCTGTTCATTTGTGATTCGAGC 58.833 45.455 0.00 0.00 0.00 5.03
3126 3207 7.775397 ATTTGCAGGTAAATAACATGATTGC 57.225 32.000 0.00 0.00 42.55 3.56
3181 3262 8.571336 ACATTACTAGGATCATTAAGCAAATGC 58.429 33.333 6.87 0.00 44.03 3.56
3245 3326 2.208431 CTAGCATCCCTTTCAAGCGAG 58.792 52.381 0.00 0.00 0.00 5.03
3296 3377 9.669353 CTTTCTCAATGTATTTATTGATTCCCG 57.331 33.333 0.00 0.00 43.80 5.14
3297 3378 9.468532 GCTTTCTCAATGTATTTATTGATTCCC 57.531 33.333 0.00 0.00 43.80 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.