Multiple sequence alignment - TraesCS7A01G222400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G222400 chr7A 100.000 3097 0 0 763 3859 191698200 191695104 0.000000e+00 5720.0
1 TraesCS7A01G222400 chr7A 100.000 545 0 0 1 545 191698962 191698418 0.000000e+00 1007.0
2 TraesCS7A01G222400 chr7A 86.233 661 63 21 869 1512 195199743 195199094 0.000000e+00 691.0
3 TraesCS7A01G222400 chr7A 83.200 375 53 9 1594 1965 191834418 191834051 6.180000e-88 335.0
4 TraesCS7A01G222400 chr7A 81.106 434 68 8 1597 2025 195190966 195190542 6.180000e-88 335.0
5 TraesCS7A01G222400 chr7A 97.674 43 1 0 3258 3300 191695642 191695600 1.490000e-09 75.0
6 TraesCS7A01G222400 chr7A 97.674 43 1 0 3321 3363 191695705 191695663 1.490000e-09 75.0
7 TraesCS7A01G222400 chr7B 86.484 2560 193 65 802 3258 154363386 154360877 0.000000e+00 2669.0
8 TraesCS7A01G222400 chr7B 94.376 1049 50 9 2001 3044 154355381 154354337 0.000000e+00 1602.0
9 TraesCS7A01G222400 chr7B 92.769 733 35 6 804 1524 154278573 154277847 0.000000e+00 1044.0
10 TraesCS7A01G222400 chr7B 89.125 754 36 13 3151 3859 154354237 154353485 0.000000e+00 896.0
11 TraesCS7A01G222400 chr7B 91.277 642 50 6 2411 3050 154276801 154276164 0.000000e+00 870.0
12 TraesCS7A01G222400 chr7B 83.926 647 83 8 865 1490 154567853 154567207 1.980000e-167 599.0
13 TraesCS7A01G222400 chr7B 92.077 366 22 3 1530 1888 154277717 154277352 3.440000e-140 508.0
14 TraesCS7A01G222400 chr7B 90.909 319 29 0 994 1312 333406087 333406405 2.750000e-116 429.0
15 TraesCS7A01G222400 chr7B 82.511 446 64 11 1528 1965 154563856 154563417 2.810000e-101 379.0
16 TraesCS7A01G222400 chr7B 80.717 446 72 7 1597 2038 333421057 333421492 6.180000e-88 335.0
17 TraesCS7A01G222400 chr7B 93.038 158 11 0 3310 3467 154181434 154181277 8.340000e-57 231.0
18 TraesCS7A01G222400 chr7B 90.968 155 10 2 1848 2001 154358841 154358690 5.050000e-49 206.0
19 TraesCS7A01G222400 chr7B 84.000 150 6 3 3168 3299 154181531 154181382 1.130000e-25 128.0
20 TraesCS7A01G222400 chr7B 97.059 68 2 0 3063 3130 154354352 154354285 8.760000e-22 115.0
21 TraesCS7A01G222400 chr7B 95.000 60 3 0 3304 3363 154354125 154354066 1.140000e-15 95.3
22 TraesCS7A01G222400 chr7B 93.878 49 3 0 3252 3300 154354051 154354003 1.490000e-09 75.0
23 TraesCS7A01G222400 chr7D 93.136 641 27 6 863 1487 184588718 184588079 0.000000e+00 924.0
24 TraesCS7A01G222400 chr7D 90.881 636 47 7 2411 3041 184587015 184586386 0.000000e+00 843.0
25 TraesCS7A01G222400 chr7D 86.145 664 59 20 869 1512 188987326 188987976 0.000000e+00 686.0
26 TraesCS7A01G222400 chr7D 91.281 367 25 3 1530 1889 184587927 184587561 9.630000e-136 494.0
27 TraesCS7A01G222400 chr7D 77.567 789 128 37 1540 2294 184864584 184863811 7.660000e-117 431.0
28 TraesCS7A01G222400 chr7D 88.393 336 26 10 2002 2336 184587498 184587175 3.610000e-105 392.0
29 TraesCS7A01G222400 chr7D 81.027 448 69 10 1597 2038 188992431 188992868 3.690000e-90 342.0
30 TraesCS7A01G222400 chr7D 87.629 194 15 4 3465 3651 184585544 184585353 2.330000e-52 217.0
31 TraesCS7A01G222400 chr7D 89.928 139 12 1 3310 3446 184585787 184585649 1.100000e-40 178.0
32 TraesCS7A01G222400 chr7D 90.698 86 6 2 786 869 184593224 184593139 3.150000e-21 113.0
33 TraesCS7A01G222400 chr7D 81.818 143 14 6 3727 3859 184582912 184582772 4.080000e-20 110.0
34 TraesCS7A01G222400 chr7D 81.507 146 9 4 3168 3295 184585884 184585739 1.900000e-18 104.0
35 TraesCS7A01G222400 chr3B 87.645 259 30 1 167 423 30248787 30248529 2.250000e-77 300.0
36 TraesCS7A01G222400 chr3B 87.259 259 31 1 167 423 29857521 29857263 1.050000e-75 294.0
37 TraesCS7A01G222400 chr1A 76.106 226 50 4 3308 3530 113471882 113472106 8.760000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G222400 chr7A 191695104 191698962 3858 True 1719.250000 5720 98.837000 1 3859 4 chr7A.!!$R4 3858
1 TraesCS7A01G222400 chr7A 195199094 195199743 649 True 691.000000 691 86.233000 869 1512 1 chr7A.!!$R3 643
2 TraesCS7A01G222400 chr7B 154353485 154363386 9901 True 808.328571 2669 92.412857 802 3859 7 chr7B.!!$R3 3057
3 TraesCS7A01G222400 chr7B 154276164 154278573 2409 True 807.333333 1044 92.041000 804 3050 3 chr7B.!!$R2 2246
4 TraesCS7A01G222400 chr7B 154563417 154567853 4436 True 489.000000 599 83.218500 865 1965 2 chr7B.!!$R4 1100
5 TraesCS7A01G222400 chr7D 188987326 188987976 650 False 686.000000 686 86.145000 869 1512 1 chr7D.!!$F1 643
6 TraesCS7A01G222400 chr7D 184863811 184864584 773 True 431.000000 431 77.567000 1540 2294 1 chr7D.!!$R2 754
7 TraesCS7A01G222400 chr7D 184582772 184588718 5946 True 407.750000 924 88.071625 863 3859 8 chr7D.!!$R3 2996

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
266 267 0.029300 CACTGAAAAGCACACCCACG 59.971 55.0 0.0 0.0 0.0 4.94 F
487 488 0.035725 TAGCGACACGGAGGAAGAGA 60.036 55.0 0.0 0.0 0.0 3.10 F
502 503 0.038251 AGAGAAACGTGATGCTCGCA 60.038 50.0 0.0 0.0 32.8 5.10 F
982 1006 0.249657 CTCCTGCTTACTCCCATCGC 60.250 60.0 0.0 0.0 0.0 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1609 5007 0.612732 CTGCTTCAATTGCCCCAGGA 60.613 55.000 0.0 0.00 0.0 3.86 R
2430 12754 0.324614 ACTTCACGTGGCATGATGGA 59.675 50.000 17.0 5.11 0.0 3.41 R
2432 12756 1.536766 ACAACTTCACGTGGCATGATG 59.463 47.619 17.0 8.00 0.0 3.07 R
2944 13270 3.872771 ACATGTCCGTACTTTTTCAACGT 59.127 39.130 0.0 0.00 34.9 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.410743 GCAGCCAAGGTTGCGCTC 62.411 66.667 12.14 1.18 41.97 5.03
35 36 4.093952 CAGCCAAGGTTGCGCTCG 62.094 66.667 9.73 0.00 34.13 5.03
39 40 3.793144 CAAGGTTGCGCTCGGCTC 61.793 66.667 9.73 0.00 44.05 4.70
72 73 4.179599 GGGGGAGGAGAGGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
73 74 4.179599 GGGGAGGAGAGGGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
74 75 4.179599 GGGAGGAGAGGGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
75 76 4.179599 GGAGGAGAGGGGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
76 77 4.179599 GAGGAGAGGGGGAGGGGG 62.180 77.778 0.00 0.00 0.00 5.40
195 196 5.942872 CTGGTTTATTACAAGCTCTTGGTG 58.057 41.667 13.48 0.00 44.45 4.17
196 197 4.217550 TGGTTTATTACAAGCTCTTGGTGC 59.782 41.667 13.48 0.00 44.45 5.01
197 198 4.217550 GGTTTATTACAAGCTCTTGGTGCA 59.782 41.667 13.48 0.00 44.45 4.57
198 199 5.154222 GTTTATTACAAGCTCTTGGTGCAC 58.846 41.667 8.80 8.80 44.45 4.57
199 200 2.340210 TTACAAGCTCTTGGTGCACA 57.660 45.000 20.43 1.62 44.45 4.57
200 201 1.593196 TACAAGCTCTTGGTGCACAC 58.407 50.000 20.43 8.79 44.45 3.82
201 202 0.394216 ACAAGCTCTTGGTGCACACA 60.394 50.000 20.43 11.53 44.45 3.72
202 203 0.029834 CAAGCTCTTGGTGCACACAC 59.970 55.000 20.43 1.36 46.66 3.82
210 211 4.400410 GTGCACACACCACTTTGC 57.600 55.556 13.17 0.00 41.21 3.68
211 212 1.809207 GTGCACACACCACTTTGCT 59.191 52.632 13.17 0.00 41.21 3.91
212 213 0.248621 GTGCACACACCACTTTGCTC 60.249 55.000 13.17 0.00 41.21 4.26
213 214 0.394216 TGCACACACCACTTTGCTCT 60.394 50.000 0.00 0.00 35.91 4.09
214 215 0.308993 GCACACACCACTTTGCTCTC 59.691 55.000 0.00 0.00 32.00 3.20
215 216 1.667236 CACACACCACTTTGCTCTCA 58.333 50.000 0.00 0.00 0.00 3.27
216 217 2.016318 CACACACCACTTTGCTCTCAA 58.984 47.619 0.00 0.00 0.00 3.02
217 218 2.620115 CACACACCACTTTGCTCTCAAT 59.380 45.455 0.00 0.00 31.33 2.57
218 219 2.620115 ACACACCACTTTGCTCTCAATG 59.380 45.455 0.00 0.00 34.58 2.82
219 220 2.880268 CACACCACTTTGCTCTCAATGA 59.120 45.455 0.00 0.00 33.20 2.57
220 221 3.316029 CACACCACTTTGCTCTCAATGAA 59.684 43.478 0.00 0.00 33.20 2.57
221 222 3.316308 ACACCACTTTGCTCTCAATGAAC 59.684 43.478 0.00 0.00 33.20 3.18
222 223 3.316029 CACCACTTTGCTCTCAATGAACA 59.684 43.478 0.00 0.00 33.20 3.18
223 224 3.567164 ACCACTTTGCTCTCAATGAACAG 59.433 43.478 0.00 0.00 33.20 3.16
224 225 3.562505 CACTTTGCTCTCAATGAACAGC 58.437 45.455 6.85 6.85 33.20 4.40
225 226 2.225019 ACTTTGCTCTCAATGAACAGCG 59.775 45.455 8.72 0.00 33.20 5.18
226 227 1.882912 TTGCTCTCAATGAACAGCGT 58.117 45.000 8.72 0.00 0.00 5.07
227 228 1.882912 TGCTCTCAATGAACAGCGTT 58.117 45.000 8.72 0.00 0.00 4.84
228 229 1.800586 TGCTCTCAATGAACAGCGTTC 59.199 47.619 12.53 12.53 0.00 3.95
229 230 2.072298 GCTCTCAATGAACAGCGTTCT 58.928 47.619 17.86 5.69 0.00 3.01
230 231 2.159734 GCTCTCAATGAACAGCGTTCTG 60.160 50.000 17.86 11.34 45.71 3.02
231 232 3.320626 CTCTCAATGAACAGCGTTCTGA 58.679 45.455 17.86 13.93 42.95 3.27
232 233 3.320626 TCTCAATGAACAGCGTTCTGAG 58.679 45.455 21.16 21.16 42.95 3.35
233 234 3.062763 CTCAATGAACAGCGTTCTGAGT 58.937 45.455 20.08 5.09 42.95 3.41
234 235 3.466836 TCAATGAACAGCGTTCTGAGTT 58.533 40.909 17.86 8.47 42.95 3.01
235 236 3.876914 TCAATGAACAGCGTTCTGAGTTT 59.123 39.130 17.86 6.00 42.95 2.66
236 237 3.885484 ATGAACAGCGTTCTGAGTTTG 57.115 42.857 17.86 0.00 42.95 2.93
237 238 2.899976 TGAACAGCGTTCTGAGTTTGA 58.100 42.857 17.86 0.00 42.95 2.69
238 239 3.266636 TGAACAGCGTTCTGAGTTTGAA 58.733 40.909 17.86 0.00 42.95 2.69
239 240 3.876914 TGAACAGCGTTCTGAGTTTGAAT 59.123 39.130 17.86 0.00 42.95 2.57
240 241 4.024893 TGAACAGCGTTCTGAGTTTGAATC 60.025 41.667 17.86 0.00 42.95 2.52
241 242 3.733337 ACAGCGTTCTGAGTTTGAATCT 58.267 40.909 0.00 0.00 42.95 2.40
242 243 3.496130 ACAGCGTTCTGAGTTTGAATCTG 59.504 43.478 0.00 0.00 42.95 2.90
243 244 3.496130 CAGCGTTCTGAGTTTGAATCTGT 59.504 43.478 0.00 0.00 42.95 3.41
244 245 4.024556 CAGCGTTCTGAGTTTGAATCTGTT 60.025 41.667 0.00 0.00 42.95 3.16
245 246 4.024556 AGCGTTCTGAGTTTGAATCTGTTG 60.025 41.667 0.00 0.00 0.00 3.33
246 247 4.260784 GCGTTCTGAGTTTGAATCTGTTGT 60.261 41.667 0.00 0.00 0.00 3.32
247 248 5.435557 CGTTCTGAGTTTGAATCTGTTGTC 58.564 41.667 0.00 0.00 0.00 3.18
248 249 5.006649 CGTTCTGAGTTTGAATCTGTTGTCA 59.993 40.000 0.00 0.00 0.00 3.58
249 250 5.991328 TCTGAGTTTGAATCTGTTGTCAC 57.009 39.130 0.00 0.00 0.00 3.67
250 251 5.674525 TCTGAGTTTGAATCTGTTGTCACT 58.325 37.500 0.00 0.00 0.00 3.41
251 252 5.525012 TCTGAGTTTGAATCTGTTGTCACTG 59.475 40.000 0.00 0.00 0.00 3.66
252 253 5.427378 TGAGTTTGAATCTGTTGTCACTGA 58.573 37.500 0.00 0.00 35.52 3.41
253 254 5.879777 TGAGTTTGAATCTGTTGTCACTGAA 59.120 36.000 0.00 0.00 34.79 3.02
254 255 6.374053 TGAGTTTGAATCTGTTGTCACTGAAA 59.626 34.615 0.00 0.00 34.79 2.69
255 256 7.094420 TGAGTTTGAATCTGTTGTCACTGAAAA 60.094 33.333 0.00 0.00 34.79 2.29
256 257 7.253422 AGTTTGAATCTGTTGTCACTGAAAAG 58.747 34.615 0.00 0.00 34.79 2.27
257 258 5.173774 TGAATCTGTTGTCACTGAAAAGC 57.826 39.130 0.00 0.00 34.79 3.51
258 259 4.639755 TGAATCTGTTGTCACTGAAAAGCA 59.360 37.500 0.00 0.00 34.79 3.91
259 260 4.558538 ATCTGTTGTCACTGAAAAGCAC 57.441 40.909 0.00 0.00 34.79 4.40
260 261 3.342719 TCTGTTGTCACTGAAAAGCACA 58.657 40.909 0.00 0.00 0.00 4.57
261 262 3.126858 TCTGTTGTCACTGAAAAGCACAC 59.873 43.478 0.00 0.00 0.00 3.82
262 263 2.163412 TGTTGTCACTGAAAAGCACACC 59.837 45.455 0.00 0.00 0.00 4.16
263 264 1.388547 TGTCACTGAAAAGCACACCC 58.611 50.000 0.00 0.00 0.00 4.61
264 265 1.340502 TGTCACTGAAAAGCACACCCA 60.341 47.619 0.00 0.00 0.00 4.51
265 266 1.065551 GTCACTGAAAAGCACACCCAC 59.934 52.381 0.00 0.00 0.00 4.61
266 267 0.029300 CACTGAAAAGCACACCCACG 59.971 55.000 0.00 0.00 0.00 4.94
267 268 1.101049 ACTGAAAAGCACACCCACGG 61.101 55.000 0.00 0.00 0.00 4.94
268 269 1.795170 CTGAAAAGCACACCCACGGG 61.795 60.000 0.00 0.00 42.03 5.28
278 279 2.566010 CCCACGGGTGCAAAATCG 59.434 61.111 0.00 0.00 0.00 3.34
279 280 2.265182 CCCACGGGTGCAAAATCGT 61.265 57.895 0.00 0.00 36.19 3.73
280 281 0.956410 CCCACGGGTGCAAAATCGTA 60.956 55.000 0.00 0.00 34.31 3.43
281 282 0.446222 CCACGGGTGCAAAATCGTAG 59.554 55.000 0.00 0.00 34.31 3.51
282 283 0.446222 CACGGGTGCAAAATCGTAGG 59.554 55.000 0.00 0.00 34.31 3.18
283 284 0.035739 ACGGGTGCAAAATCGTAGGT 59.964 50.000 0.00 0.00 33.89 3.08
284 285 1.161843 CGGGTGCAAAATCGTAGGTT 58.838 50.000 0.00 0.00 0.00 3.50
285 286 1.129811 CGGGTGCAAAATCGTAGGTTC 59.870 52.381 0.00 0.00 0.00 3.62
286 287 2.433436 GGGTGCAAAATCGTAGGTTCT 58.567 47.619 0.00 0.00 0.00 3.01
287 288 3.602483 GGGTGCAAAATCGTAGGTTCTA 58.398 45.455 0.00 0.00 0.00 2.10
288 289 3.621715 GGGTGCAAAATCGTAGGTTCTAG 59.378 47.826 0.00 0.00 0.00 2.43
289 290 3.621715 GGTGCAAAATCGTAGGTTCTAGG 59.378 47.826 0.00 0.00 0.00 3.02
290 291 4.501071 GTGCAAAATCGTAGGTTCTAGGA 58.499 43.478 0.00 0.74 0.00 2.94
291 292 4.567159 GTGCAAAATCGTAGGTTCTAGGAG 59.433 45.833 0.00 0.00 0.00 3.69
292 293 4.120589 GCAAAATCGTAGGTTCTAGGAGG 58.879 47.826 0.00 0.00 0.00 4.30
293 294 4.382793 GCAAAATCGTAGGTTCTAGGAGGT 60.383 45.833 0.00 0.00 0.00 3.85
294 295 5.109903 CAAAATCGTAGGTTCTAGGAGGTG 58.890 45.833 0.00 0.00 0.00 4.00
295 296 2.431954 TCGTAGGTTCTAGGAGGTGG 57.568 55.000 0.00 0.00 0.00 4.61
296 297 0.745468 CGTAGGTTCTAGGAGGTGGC 59.255 60.000 0.00 0.00 0.00 5.01
297 298 1.685491 CGTAGGTTCTAGGAGGTGGCT 60.685 57.143 0.00 0.00 0.00 4.75
298 299 2.468915 GTAGGTTCTAGGAGGTGGCTT 58.531 52.381 0.00 0.00 0.00 4.35
299 300 1.280457 AGGTTCTAGGAGGTGGCTTG 58.720 55.000 0.00 0.00 0.00 4.01
300 301 0.393132 GGTTCTAGGAGGTGGCTTGC 60.393 60.000 0.00 0.00 0.00 4.01
301 302 0.615850 GTTCTAGGAGGTGGCTTGCT 59.384 55.000 0.00 0.00 0.00 3.91
302 303 0.615331 TTCTAGGAGGTGGCTTGCTG 59.385 55.000 0.00 0.00 0.00 4.41
303 304 1.451028 CTAGGAGGTGGCTTGCTGC 60.451 63.158 0.00 0.00 41.94 5.25
304 305 2.189191 CTAGGAGGTGGCTTGCTGCA 62.189 60.000 0.00 0.00 45.15 4.41
305 306 2.189191 TAGGAGGTGGCTTGCTGCAG 62.189 60.000 10.11 10.11 45.15 4.41
306 307 3.060615 GAGGTGGCTTGCTGCAGG 61.061 66.667 17.12 7.47 45.15 4.85
307 308 3.557903 GAGGTGGCTTGCTGCAGGA 62.558 63.158 17.12 10.66 45.15 3.86
308 309 3.368571 GGTGGCTTGCTGCAGGAC 61.369 66.667 17.12 13.90 45.15 3.85
309 310 2.282040 GTGGCTTGCTGCAGGACT 60.282 61.111 18.90 0.00 45.15 3.85
310 311 1.900498 GTGGCTTGCTGCAGGACTT 60.900 57.895 18.90 0.00 45.15 3.01
311 312 1.900016 TGGCTTGCTGCAGGACTTG 60.900 57.895 18.90 6.77 45.15 3.16
312 313 1.601759 GGCTTGCTGCAGGACTTGA 60.602 57.895 17.12 0.00 45.15 3.02
313 314 1.578423 GCTTGCTGCAGGACTTGAC 59.422 57.895 17.12 0.00 42.31 3.18
314 315 1.168407 GCTTGCTGCAGGACTTGACA 61.168 55.000 17.12 0.00 42.31 3.58
315 316 0.873054 CTTGCTGCAGGACTTGACAG 59.127 55.000 17.12 1.44 35.42 3.51
316 317 0.181114 TTGCTGCAGGACTTGACAGT 59.819 50.000 17.12 0.00 35.05 3.55
334 335 6.242508 GACAGTCTGTCTCAAAAATTACCC 57.757 41.667 23.25 0.00 43.73 3.69
335 336 4.755123 ACAGTCTGTCTCAAAAATTACCCG 59.245 41.667 0.00 0.00 0.00 5.28
336 337 4.154195 CAGTCTGTCTCAAAAATTACCCGG 59.846 45.833 0.00 0.00 0.00 5.73
337 338 3.078837 TCTGTCTCAAAAATTACCCGGC 58.921 45.455 0.00 0.00 0.00 6.13
338 339 2.163613 CTGTCTCAAAAATTACCCGGCC 59.836 50.000 0.00 0.00 0.00 6.13
339 340 2.164338 GTCTCAAAAATTACCCGGCCA 58.836 47.619 2.24 0.00 0.00 5.36
340 341 2.094906 GTCTCAAAAATTACCCGGCCAC 60.095 50.000 2.24 0.00 0.00 5.01
341 342 1.203758 CTCAAAAATTACCCGGCCACC 59.796 52.381 2.24 0.00 0.00 4.61
342 343 0.248012 CAAAAATTACCCGGCCACCC 59.752 55.000 2.24 0.00 0.00 4.61
343 344 0.905809 AAAAATTACCCGGCCACCCC 60.906 55.000 2.24 0.00 0.00 4.95
344 345 2.808761 AAAATTACCCGGCCACCCCC 62.809 60.000 2.24 0.00 0.00 5.40
354 355 3.260100 CCACCCCCAAGCCTGTCT 61.260 66.667 0.00 0.00 0.00 3.41
355 356 2.034687 CACCCCCAAGCCTGTCTG 59.965 66.667 0.00 0.00 0.00 3.51
356 357 3.971702 ACCCCCAAGCCTGTCTGC 61.972 66.667 0.00 0.00 0.00 4.26
357 358 4.748144 CCCCCAAGCCTGTCTGCC 62.748 72.222 0.00 0.00 0.00 4.85
358 359 4.748144 CCCCAAGCCTGTCTGCCC 62.748 72.222 0.00 0.00 0.00 5.36
359 360 3.970410 CCCAAGCCTGTCTGCCCA 61.970 66.667 0.00 0.00 0.00 5.36
360 361 2.674380 CCAAGCCTGTCTGCCCAC 60.674 66.667 0.00 0.00 0.00 4.61
361 362 2.433446 CAAGCCTGTCTGCCCACT 59.567 61.111 0.00 0.00 0.00 4.00
362 363 1.673665 CAAGCCTGTCTGCCCACTC 60.674 63.158 0.00 0.00 0.00 3.51
363 364 3.245668 AAGCCTGTCTGCCCACTCG 62.246 63.158 0.00 0.00 0.00 4.18
364 365 3.695606 GCCTGTCTGCCCACTCGA 61.696 66.667 0.00 0.00 0.00 4.04
365 366 2.262915 CCTGTCTGCCCACTCGAC 59.737 66.667 0.00 0.00 0.00 4.20
366 367 2.279069 CCTGTCTGCCCACTCGACT 61.279 63.158 0.00 0.00 0.00 4.18
367 368 1.080230 CTGTCTGCCCACTCGACTG 60.080 63.158 0.00 0.00 0.00 3.51
368 369 2.433318 GTCTGCCCACTCGACTGC 60.433 66.667 0.00 0.00 0.00 4.40
369 370 2.601666 TCTGCCCACTCGACTGCT 60.602 61.111 0.00 0.00 0.00 4.24
370 371 2.210013 TCTGCCCACTCGACTGCTT 61.210 57.895 0.00 0.00 0.00 3.91
371 372 2.031012 TGCCCACTCGACTGCTTG 59.969 61.111 0.00 0.00 0.00 4.01
372 373 2.743928 GCCCACTCGACTGCTTGG 60.744 66.667 0.00 0.00 0.00 3.61
373 374 2.743718 CCCACTCGACTGCTTGGT 59.256 61.111 0.00 0.00 0.00 3.67
374 375 1.972198 CCCACTCGACTGCTTGGTA 59.028 57.895 0.00 0.00 0.00 3.25
375 376 0.389948 CCCACTCGACTGCTTGGTAC 60.390 60.000 0.00 0.00 0.00 3.34
376 377 0.317160 CCACTCGACTGCTTGGTACA 59.683 55.000 0.00 0.00 0.00 2.90
377 378 1.670087 CCACTCGACTGCTTGGTACAG 60.670 57.143 0.00 0.00 42.39 2.74
378 379 1.269723 CACTCGACTGCTTGGTACAGA 59.730 52.381 0.00 0.00 42.39 3.41
379 380 1.542030 ACTCGACTGCTTGGTACAGAG 59.458 52.381 0.00 0.00 42.39 3.35
380 381 0.243907 TCGACTGCTTGGTACAGAGC 59.756 55.000 11.54 11.54 42.39 4.09
381 382 0.244994 CGACTGCTTGGTACAGAGCT 59.755 55.000 17.27 0.00 42.39 4.09
382 383 1.472878 CGACTGCTTGGTACAGAGCTA 59.527 52.381 17.27 6.51 42.39 3.32
383 384 2.478709 CGACTGCTTGGTACAGAGCTAG 60.479 54.545 17.27 14.78 42.39 3.42
384 385 2.755655 GACTGCTTGGTACAGAGCTAGA 59.244 50.000 17.27 1.24 42.39 2.43
385 386 2.757868 ACTGCTTGGTACAGAGCTAGAG 59.242 50.000 17.27 10.81 42.39 2.43
386 387 2.757868 CTGCTTGGTACAGAGCTAGAGT 59.242 50.000 17.27 0.00 42.39 3.24
387 388 3.165875 TGCTTGGTACAGAGCTAGAGTT 58.834 45.455 17.27 0.00 42.39 3.01
388 389 3.578716 TGCTTGGTACAGAGCTAGAGTTT 59.421 43.478 17.27 0.00 42.39 2.66
389 390 4.177783 GCTTGGTACAGAGCTAGAGTTTC 58.822 47.826 11.26 0.00 42.39 2.78
390 391 4.322049 GCTTGGTACAGAGCTAGAGTTTCA 60.322 45.833 11.26 0.00 42.39 2.69
391 392 5.392767 TTGGTACAGAGCTAGAGTTTCAG 57.607 43.478 0.00 0.00 42.39 3.02
392 393 3.193691 TGGTACAGAGCTAGAGTTTCAGC 59.806 47.826 0.00 0.00 38.09 4.26
393 394 3.193691 GGTACAGAGCTAGAGTTTCAGCA 59.806 47.826 0.00 0.00 40.36 4.41
394 395 4.142049 GGTACAGAGCTAGAGTTTCAGCAT 60.142 45.833 0.00 0.00 40.36 3.79
395 396 3.859443 ACAGAGCTAGAGTTTCAGCATG 58.141 45.455 0.00 0.00 40.36 4.06
396 397 3.260380 ACAGAGCTAGAGTTTCAGCATGT 59.740 43.478 0.00 0.00 40.36 3.21
397 398 4.464244 ACAGAGCTAGAGTTTCAGCATGTA 59.536 41.667 0.00 0.00 40.36 2.29
398 399 5.047021 ACAGAGCTAGAGTTTCAGCATGTAA 60.047 40.000 0.00 0.00 40.36 2.41
399 400 5.871524 CAGAGCTAGAGTTTCAGCATGTAAA 59.128 40.000 0.00 0.00 40.36 2.01
400 401 6.035866 CAGAGCTAGAGTTTCAGCATGTAAAG 59.964 42.308 0.00 0.00 40.36 1.85
401 402 4.633565 AGCTAGAGTTTCAGCATGTAAAGC 59.366 41.667 0.00 0.00 40.36 3.51
402 403 4.393062 GCTAGAGTTTCAGCATGTAAAGCA 59.607 41.667 0.00 0.00 37.73 3.91
403 404 5.447010 GCTAGAGTTTCAGCATGTAAAGCAG 60.447 44.000 0.00 0.00 37.73 4.24
404 405 4.392940 AGAGTTTCAGCATGTAAAGCAGT 58.607 39.130 0.00 0.00 37.40 4.40
405 406 4.453819 AGAGTTTCAGCATGTAAAGCAGTC 59.546 41.667 0.00 0.00 37.40 3.51
406 407 3.187227 AGTTTCAGCATGTAAAGCAGTCG 59.813 43.478 0.00 0.00 37.40 4.18
407 408 2.741759 TCAGCATGTAAAGCAGTCGA 57.258 45.000 0.00 0.00 37.40 4.20
408 409 2.337583 TCAGCATGTAAAGCAGTCGAC 58.662 47.619 7.70 7.70 37.40 4.20
409 410 2.068519 CAGCATGTAAAGCAGTCGACA 58.931 47.619 19.50 0.00 0.00 4.35
410 411 2.069273 AGCATGTAAAGCAGTCGACAC 58.931 47.619 19.50 9.51 0.00 3.67
411 412 1.798223 GCATGTAAAGCAGTCGACACA 59.202 47.619 19.50 12.37 0.00 3.72
412 413 2.411547 GCATGTAAAGCAGTCGACACAC 60.412 50.000 19.50 6.35 0.00 3.82
413 414 1.860676 TGTAAAGCAGTCGACACACC 58.139 50.000 19.50 2.50 0.00 4.16
414 415 1.137282 TGTAAAGCAGTCGACACACCA 59.863 47.619 19.50 1.88 0.00 4.17
415 416 2.224185 TGTAAAGCAGTCGACACACCAT 60.224 45.455 19.50 1.70 0.00 3.55
416 417 1.229428 AAAGCAGTCGACACACCATG 58.771 50.000 19.50 7.11 0.00 3.66
417 418 1.230635 AAGCAGTCGACACACCATGC 61.231 55.000 19.50 17.03 0.00 4.06
418 419 1.669115 GCAGTCGACACACCATGCT 60.669 57.895 19.50 0.00 0.00 3.79
419 420 1.230635 GCAGTCGACACACCATGCTT 61.231 55.000 19.50 0.00 0.00 3.91
420 421 1.939381 GCAGTCGACACACCATGCTTA 60.939 52.381 19.50 0.00 0.00 3.09
421 422 1.995484 CAGTCGACACACCATGCTTAG 59.005 52.381 19.50 0.00 0.00 2.18
422 423 0.721718 GTCGACACACCATGCTTAGC 59.278 55.000 11.55 0.00 0.00 3.09
423 424 0.608130 TCGACACACCATGCTTAGCT 59.392 50.000 5.60 0.00 0.00 3.32
424 425 1.822371 TCGACACACCATGCTTAGCTA 59.178 47.619 5.60 0.00 0.00 3.32
425 426 2.159240 TCGACACACCATGCTTAGCTAG 60.159 50.000 5.60 0.00 0.00 3.42
426 427 2.159240 CGACACACCATGCTTAGCTAGA 60.159 50.000 5.60 0.00 0.00 2.43
427 428 3.452474 GACACACCATGCTTAGCTAGAG 58.548 50.000 5.60 0.00 0.00 2.43
428 429 2.834549 ACACACCATGCTTAGCTAGAGT 59.165 45.455 5.60 0.00 0.00 3.24
429 430 3.261897 ACACACCATGCTTAGCTAGAGTT 59.738 43.478 5.60 0.00 0.00 3.01
430 431 4.256920 CACACCATGCTTAGCTAGAGTTT 58.743 43.478 5.60 0.00 0.00 2.66
431 432 4.093998 CACACCATGCTTAGCTAGAGTTTG 59.906 45.833 5.60 0.00 0.00 2.93
432 433 4.020218 ACACCATGCTTAGCTAGAGTTTGA 60.020 41.667 5.60 0.00 0.00 2.69
433 434 4.569966 CACCATGCTTAGCTAGAGTTTGAG 59.430 45.833 5.60 0.00 0.00 3.02
434 435 4.467795 ACCATGCTTAGCTAGAGTTTGAGA 59.532 41.667 5.60 0.00 0.00 3.27
435 436 5.046304 ACCATGCTTAGCTAGAGTTTGAGAA 60.046 40.000 5.60 0.00 0.00 2.87
436 437 5.523188 CCATGCTTAGCTAGAGTTTGAGAAG 59.477 44.000 5.60 0.00 0.00 2.85
437 438 5.984695 TGCTTAGCTAGAGTTTGAGAAGA 57.015 39.130 5.60 0.00 0.00 2.87
438 439 6.346477 TGCTTAGCTAGAGTTTGAGAAGAA 57.654 37.500 5.60 0.00 0.00 2.52
439 440 6.159988 TGCTTAGCTAGAGTTTGAGAAGAAC 58.840 40.000 5.60 0.00 0.00 3.01
440 441 6.015010 TGCTTAGCTAGAGTTTGAGAAGAACT 60.015 38.462 5.60 0.00 39.90 3.01
441 442 6.310224 GCTTAGCTAGAGTTTGAGAAGAACTG 59.690 42.308 0.00 0.00 37.46 3.16
442 443 4.565022 AGCTAGAGTTTGAGAAGAACTGC 58.435 43.478 0.00 0.00 37.46 4.40
443 444 4.283212 AGCTAGAGTTTGAGAAGAACTGCT 59.717 41.667 0.00 0.00 37.46 4.24
444 445 5.478679 AGCTAGAGTTTGAGAAGAACTGCTA 59.521 40.000 0.00 0.00 37.46 3.49
445 446 6.015010 AGCTAGAGTTTGAGAAGAACTGCTAA 60.015 38.462 0.00 0.00 37.46 3.09
446 447 6.090223 GCTAGAGTTTGAGAAGAACTGCTAAC 59.910 42.308 0.00 0.00 37.46 2.34
447 448 6.168270 AGAGTTTGAGAAGAACTGCTAACT 57.832 37.500 0.00 0.00 37.46 2.24
448 449 6.587273 AGAGTTTGAGAAGAACTGCTAACTT 58.413 36.000 0.00 0.00 37.46 2.66
449 450 6.481644 AGAGTTTGAGAAGAACTGCTAACTTG 59.518 38.462 0.00 0.00 37.46 3.16
450 451 6.349300 AGTTTGAGAAGAACTGCTAACTTGA 58.651 36.000 0.00 0.00 36.08 3.02
451 452 6.995091 AGTTTGAGAAGAACTGCTAACTTGAT 59.005 34.615 0.00 0.00 36.08 2.57
452 453 7.500559 AGTTTGAGAAGAACTGCTAACTTGATT 59.499 33.333 0.00 0.00 36.08 2.57
453 454 8.774586 GTTTGAGAAGAACTGCTAACTTGATTA 58.225 33.333 0.00 0.00 0.00 1.75
454 455 7.891183 TGAGAAGAACTGCTAACTTGATTAC 57.109 36.000 0.00 0.00 0.00 1.89
455 456 7.441836 TGAGAAGAACTGCTAACTTGATTACA 58.558 34.615 0.00 0.00 0.00 2.41
456 457 7.385205 TGAGAAGAACTGCTAACTTGATTACAC 59.615 37.037 0.00 0.00 0.00 2.90
457 458 7.217200 AGAAGAACTGCTAACTTGATTACACA 58.783 34.615 0.00 0.00 0.00 3.72
458 459 7.880195 AGAAGAACTGCTAACTTGATTACACAT 59.120 33.333 0.00 0.00 0.00 3.21
459 460 7.369803 AGAACTGCTAACTTGATTACACATG 57.630 36.000 0.00 0.00 0.00 3.21
460 461 7.161404 AGAACTGCTAACTTGATTACACATGA 58.839 34.615 0.00 0.00 0.00 3.07
461 462 7.661437 AGAACTGCTAACTTGATTACACATGAA 59.339 33.333 0.00 0.00 0.00 2.57
462 463 7.744087 ACTGCTAACTTGATTACACATGAAA 57.256 32.000 0.00 0.00 0.00 2.69
463 464 8.340618 ACTGCTAACTTGATTACACATGAAAT 57.659 30.769 0.00 0.00 0.00 2.17
478 479 2.267426 TGAAATGACATAGCGACACGG 58.733 47.619 0.00 0.00 0.00 4.94
479 480 2.094442 TGAAATGACATAGCGACACGGA 60.094 45.455 0.00 0.00 0.00 4.69
480 481 2.209838 AATGACATAGCGACACGGAG 57.790 50.000 0.00 0.00 0.00 4.63
481 482 0.385751 ATGACATAGCGACACGGAGG 59.614 55.000 0.00 0.00 0.00 4.30
482 483 0.678684 TGACATAGCGACACGGAGGA 60.679 55.000 0.00 0.00 0.00 3.71
483 484 0.454600 GACATAGCGACACGGAGGAA 59.545 55.000 0.00 0.00 0.00 3.36
484 485 0.456221 ACATAGCGACACGGAGGAAG 59.544 55.000 0.00 0.00 0.00 3.46
485 486 0.738975 CATAGCGACACGGAGGAAGA 59.261 55.000 0.00 0.00 0.00 2.87
486 487 1.025812 ATAGCGACACGGAGGAAGAG 58.974 55.000 0.00 0.00 0.00 2.85
487 488 0.035725 TAGCGACACGGAGGAAGAGA 60.036 55.000 0.00 0.00 0.00 3.10
488 489 0.894184 AGCGACACGGAGGAAGAGAA 60.894 55.000 0.00 0.00 0.00 2.87
489 490 0.038526 GCGACACGGAGGAAGAGAAA 60.039 55.000 0.00 0.00 0.00 2.52
490 491 1.699343 CGACACGGAGGAAGAGAAAC 58.301 55.000 0.00 0.00 0.00 2.78
491 492 1.699343 GACACGGAGGAAGAGAAACG 58.301 55.000 0.00 0.00 0.00 3.60
492 493 1.000496 GACACGGAGGAAGAGAAACGT 60.000 52.381 0.00 0.00 34.61 3.99
493 494 1.419374 CACGGAGGAAGAGAAACGTG 58.581 55.000 0.00 0.00 44.20 4.49
494 495 1.325355 ACGGAGGAAGAGAAACGTGA 58.675 50.000 0.00 0.00 32.90 4.35
495 496 1.893801 ACGGAGGAAGAGAAACGTGAT 59.106 47.619 0.00 0.00 32.90 3.06
496 497 2.263077 CGGAGGAAGAGAAACGTGATG 58.737 52.381 0.00 0.00 0.00 3.07
497 498 2.003301 GGAGGAAGAGAAACGTGATGC 58.997 52.381 0.00 0.00 0.00 3.91
498 499 2.354203 GGAGGAAGAGAAACGTGATGCT 60.354 50.000 0.00 0.00 0.00 3.79
499 500 2.926838 GAGGAAGAGAAACGTGATGCTC 59.073 50.000 0.00 0.00 0.00 4.26
500 501 1.656095 GGAAGAGAAACGTGATGCTCG 59.344 52.381 0.00 0.00 32.80 5.03
501 502 1.059835 GAAGAGAAACGTGATGCTCGC 59.940 52.381 0.00 0.00 32.80 5.03
502 503 0.038251 AGAGAAACGTGATGCTCGCA 60.038 50.000 0.00 0.00 32.80 5.10
503 504 0.790207 GAGAAACGTGATGCTCGCAA 59.210 50.000 0.00 0.00 0.00 4.85
504 505 0.792640 AGAAACGTGATGCTCGCAAG 59.207 50.000 0.00 0.00 0.00 4.01
515 516 4.354155 TCGCAAGAGTTGGTTCGG 57.646 55.556 0.00 0.00 45.01 4.30
516 517 1.743391 TCGCAAGAGTTGGTTCGGA 59.257 52.632 0.00 0.00 45.01 4.55
517 518 0.599204 TCGCAAGAGTTGGTTCGGAC 60.599 55.000 0.00 0.00 45.01 4.79
518 519 0.600255 CGCAAGAGTTGGTTCGGACT 60.600 55.000 0.00 0.00 43.02 3.85
519 520 1.149148 GCAAGAGTTGGTTCGGACTC 58.851 55.000 0.00 0.00 41.99 3.36
520 521 1.797025 CAAGAGTTGGTTCGGACTCC 58.203 55.000 0.00 0.00 42.51 3.85
825 826 2.120232 GGAGATGTCGTGCAATACTCG 58.880 52.381 0.00 0.00 36.62 4.18
832 833 3.473669 TGCAATACTCGTGCAGCG 58.526 55.556 0.00 0.00 46.76 5.18
942 966 3.156293 CACATCCACCATCAACCTCAAA 58.844 45.455 0.00 0.00 0.00 2.69
955 979 2.545810 ACCTCAAAGAGCTCTAAGCCT 58.454 47.619 18.59 0.00 43.77 4.58
982 1006 0.249657 CTCCTGCTTACTCCCATCGC 60.250 60.000 0.00 0.00 0.00 4.58
1317 1367 2.742372 GTCTTCGTGGTGGCGCAT 60.742 61.111 10.83 0.00 0.00 4.73
1334 1384 1.152963 ATGACTGGGGCGCCATAAC 60.153 57.895 30.85 15.61 0.00 1.89
1356 1406 1.228367 CTGGAGCCTGTGCCAGTTT 60.228 57.895 0.00 0.00 45.21 2.66
1377 1427 3.322466 CCTGACCGGGTGAAGGCT 61.322 66.667 3.30 0.00 0.00 4.58
1492 1542 1.747355 GCAGCTTCCAGGTACGTACTA 59.253 52.381 24.07 6.15 0.00 1.82
1572 4966 2.280797 TGTCTGGAGTTGCACGCC 60.281 61.111 0.00 0.00 38.65 5.68
1609 5007 7.765695 CCAATATGGTGCTAATTTGTAGGAT 57.234 36.000 0.00 0.00 31.35 3.24
1846 5245 2.981898 ACCGTGCCCTGAATAAGTAAC 58.018 47.619 0.00 0.00 0.00 2.50
1881 5283 7.150783 ACTTTGGACTATTTTCATCTTGAGC 57.849 36.000 0.00 0.00 0.00 4.26
1882 5284 6.944862 ACTTTGGACTATTTTCATCTTGAGCT 59.055 34.615 0.00 0.00 0.00 4.09
1883 5285 7.449704 ACTTTGGACTATTTTCATCTTGAGCTT 59.550 33.333 0.00 0.00 0.00 3.74
1923 5360 6.700081 TGGATAAGTGTGCTTAACTATTAGCG 59.300 38.462 0.00 0.00 40.22 4.26
1933 8836 9.680946 GTGCTTAACTATTAGCGTAAGTTAAAC 57.319 33.333 13.75 11.30 46.09 2.01
1954 8857 6.994421 AACATGAAGACCCAAACCTAAAAT 57.006 33.333 0.00 0.00 0.00 1.82
2381 12646 7.927629 ACATTTGTCCACAATAATGCCATATTC 59.072 33.333 4.65 0.00 35.55 1.75
2462 12786 5.178809 GCCACGTGAAGTTGTCTTATAAACT 59.821 40.000 19.30 0.00 38.25 2.66
2566 12890 1.002502 GGGTAACTGGACTGCACCC 60.003 63.158 0.00 0.00 42.00 4.61
2573 12897 0.540365 CTGGACTGCACCCCACAATT 60.540 55.000 0.00 0.00 0.00 2.32
2585 12909 5.279456 GCACCCCACAATTTTCTTGTCTAAT 60.279 40.000 0.00 0.00 0.00 1.73
2588 12912 8.028938 CACCCCACAATTTTCTTGTCTAATAAG 58.971 37.037 0.00 0.00 0.00 1.73
2783 13108 4.096382 GGCGTGGTGATAATGAAAGATGTT 59.904 41.667 0.00 0.00 0.00 2.71
2861 13186 9.612620 AGCTTCATAAAGAAATTCAACTAAACG 57.387 29.630 0.00 0.00 35.40 3.60
2868 13193 7.668525 AAGAAATTCAACTAAACGGAGGTAG 57.331 36.000 0.00 0.00 0.00 3.18
2869 13194 6.766429 AGAAATTCAACTAAACGGAGGTAGT 58.234 36.000 0.00 0.00 34.61 2.73
2870 13195 7.899973 AGAAATTCAACTAAACGGAGGTAGTA 58.100 34.615 0.00 0.00 32.49 1.82
2871 13196 8.537858 AGAAATTCAACTAAACGGAGGTAGTAT 58.462 33.333 0.00 0.00 32.49 2.12
2872 13197 9.807649 GAAATTCAACTAAACGGAGGTAGTATA 57.192 33.333 0.00 0.00 32.49 1.47
2965 13291 4.461992 ACGTTGAAAAAGTACGGACATG 57.538 40.909 0.00 0.00 36.57 3.21
3007 13334 8.771920 TTTACTGTCCACTACTTGTATCATTG 57.228 34.615 0.00 0.00 0.00 2.82
3044 13374 0.400213 TACACCTGCTCCACTTTGGG 59.600 55.000 0.00 0.00 38.32 4.12
3045 13375 1.151450 CACCTGCTCCACTTTGGGT 59.849 57.895 0.00 0.00 38.32 4.51
3046 13376 0.468029 CACCTGCTCCACTTTGGGTT 60.468 55.000 0.00 0.00 38.32 4.11
3047 13377 0.261696 ACCTGCTCCACTTTGGGTTT 59.738 50.000 0.00 0.00 38.32 3.27
3048 13378 1.342975 ACCTGCTCCACTTTGGGTTTT 60.343 47.619 0.00 0.00 38.32 2.43
3049 13379 1.762370 CCTGCTCCACTTTGGGTTTTT 59.238 47.619 0.00 0.00 38.32 1.94
3071 13401 2.727123 TTTTGAGACAACCTGCTCCA 57.273 45.000 0.00 0.00 0.00 3.86
3072 13402 1.967319 TTTGAGACAACCTGCTCCAC 58.033 50.000 0.00 0.00 0.00 4.02
3073 13403 1.131638 TTGAGACAACCTGCTCCACT 58.868 50.000 0.00 0.00 0.00 4.00
3074 13404 1.131638 TGAGACAACCTGCTCCACTT 58.868 50.000 0.00 0.00 0.00 3.16
3075 13405 1.490490 TGAGACAACCTGCTCCACTTT 59.510 47.619 0.00 0.00 0.00 2.66
3132 13462 2.519013 GGCTGGCCCATTAAGAATAGG 58.481 52.381 0.00 0.00 0.00 2.57
3133 13463 1.889170 GCTGGCCCATTAAGAATAGGC 59.111 52.381 0.00 0.55 43.80 3.93
3135 13465 0.881796 GGCCCATTAAGAATAGGCGC 59.118 55.000 0.00 0.00 45.22 6.53
3136 13466 0.881796 GCCCATTAAGAATAGGCGCC 59.118 55.000 21.89 21.89 36.00 6.53
3138 13468 2.582052 CCCATTAAGAATAGGCGCCAA 58.418 47.619 31.54 12.90 0.00 4.52
3139 13469 2.293399 CCCATTAAGAATAGGCGCCAAC 59.707 50.000 31.54 16.18 0.00 3.77
3140 13470 3.214328 CCATTAAGAATAGGCGCCAACT 58.786 45.455 31.54 18.24 0.00 3.16
3141 13471 3.003689 CCATTAAGAATAGGCGCCAACTG 59.996 47.826 31.54 11.66 0.00 3.16
3142 13472 3.343941 TTAAGAATAGGCGCCAACTGT 57.656 42.857 31.54 10.27 0.00 3.55
3144 13474 0.324943 AGAATAGGCGCCAACTGTGT 59.675 50.000 31.54 8.51 0.00 3.72
3146 13476 1.539827 GAATAGGCGCCAACTGTGTTT 59.460 47.619 31.54 6.76 0.00 2.83
3148 13478 1.791103 TAGGCGCCAACTGTGTTTGC 61.791 55.000 31.54 0.00 0.00 3.68
3149 13479 2.103934 GCGCCAACTGTGTTTGCA 59.896 55.556 0.00 0.00 0.00 4.08
3150 13480 2.230264 GCGCCAACTGTGTTTGCAC 61.230 57.895 0.00 0.00 45.44 4.57
3259 14010 5.027206 TCGTTGTCGAGACTAAACTGTAG 57.973 43.478 4.78 0.00 41.35 2.74
3261 14012 4.845060 CGTTGTCGAGACTAAACTGTAGAC 59.155 45.833 4.78 0.00 39.71 2.59
3262 14013 5.559608 CGTTGTCGAGACTAAACTGTAGACA 60.560 44.000 4.78 0.00 39.71 3.41
3440 14206 5.104374 CCAGCATAATTAAAGTGCAACCTG 58.896 41.667 11.15 2.27 41.19 4.00
3565 14417 0.026803 GCACTTGTAGCGCTATGTGC 59.973 55.000 34.42 34.42 42.69 4.57
3594 14449 5.155278 TGGCAGGTTTTTCTCGATAAGTA 57.845 39.130 0.00 0.00 0.00 2.24
3697 14607 5.452078 TTTCTGCTCGATTTTTCAACCAT 57.548 34.783 0.00 0.00 0.00 3.55
3702 14612 6.200665 TCTGCTCGATTTTTCAACCATTTTTG 59.799 34.615 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.410743 GAGCGCAACCTTGGCTGC 62.411 66.667 11.47 5.06 35.71 5.25
18 19 4.093952 CGAGCGCAACCTTGGCTG 62.094 66.667 11.47 0.00 35.71 4.85
22 23 3.793144 GAGCCGAGCGCAACCTTG 61.793 66.667 11.47 0.00 41.38 3.61
55 56 4.179599 CTCCCCCTCTCCTCCCCC 62.180 77.778 0.00 0.00 0.00 5.40
56 57 4.179599 CCTCCCCCTCTCCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
57 58 4.179599 CCCTCCCCCTCTCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
58 59 4.179599 CCCCTCCCCCTCTCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
59 60 4.179599 CCCCCTCCCCCTCTCCTC 62.180 77.778 0.00 0.00 0.00 3.71
155 156 4.681978 GCGTATGGCCCCGCTAGG 62.682 72.222 20.35 5.88 46.08 3.02
171 172 4.459337 ACCAAGAGCTTGTAATAAACCAGC 59.541 41.667 9.18 0.00 45.14 4.85
172 173 5.619981 GCACCAAGAGCTTGTAATAAACCAG 60.620 44.000 9.18 0.00 38.85 4.00
173 174 4.217550 GCACCAAGAGCTTGTAATAAACCA 59.782 41.667 9.18 0.00 38.85 3.67
174 175 4.217550 TGCACCAAGAGCTTGTAATAAACC 59.782 41.667 9.18 0.00 38.85 3.27
175 176 5.154222 GTGCACCAAGAGCTTGTAATAAAC 58.846 41.667 5.22 0.00 38.85 2.01
176 177 4.824537 TGTGCACCAAGAGCTTGTAATAAA 59.175 37.500 15.69 0.00 38.85 1.40
177 178 4.215399 GTGTGCACCAAGAGCTTGTAATAA 59.785 41.667 15.69 0.00 38.85 1.40
178 179 3.751175 GTGTGCACCAAGAGCTTGTAATA 59.249 43.478 15.69 0.00 38.85 0.98
179 180 2.554032 GTGTGCACCAAGAGCTTGTAAT 59.446 45.455 15.69 0.00 38.85 1.89
180 181 1.946768 GTGTGCACCAAGAGCTTGTAA 59.053 47.619 15.69 0.00 38.85 2.41
181 182 1.134250 TGTGTGCACCAAGAGCTTGTA 60.134 47.619 15.69 0.00 38.85 2.41
182 183 0.394216 TGTGTGCACCAAGAGCTTGT 60.394 50.000 15.69 0.00 38.85 3.16
183 184 0.029834 GTGTGTGCACCAAGAGCTTG 59.970 55.000 15.69 3.27 39.61 4.01
184 185 2.408333 GTGTGTGCACCAAGAGCTT 58.592 52.632 15.69 0.00 39.61 3.74
185 186 4.147701 GTGTGTGCACCAAGAGCT 57.852 55.556 15.69 0.00 39.61 4.09
193 194 0.248621 GAGCAAAGTGGTGTGTGCAC 60.249 55.000 10.75 10.75 44.53 4.57
194 195 0.394216 AGAGCAAAGTGGTGTGTGCA 60.394 50.000 0.00 0.00 39.50 4.57
195 196 0.308993 GAGAGCAAAGTGGTGTGTGC 59.691 55.000 0.00 0.00 37.26 4.57
196 197 1.667236 TGAGAGCAAAGTGGTGTGTG 58.333 50.000 0.00 0.00 0.00 3.82
197 198 2.418368 TTGAGAGCAAAGTGGTGTGT 57.582 45.000 0.00 0.00 0.00 3.72
198 199 2.880268 TCATTGAGAGCAAAGTGGTGTG 59.120 45.455 0.00 0.00 37.59 3.82
199 200 3.213206 TCATTGAGAGCAAAGTGGTGT 57.787 42.857 0.00 0.00 37.59 4.16
200 201 3.316029 TGTTCATTGAGAGCAAAGTGGTG 59.684 43.478 0.00 0.00 37.59 4.17
201 202 3.554934 TGTTCATTGAGAGCAAAGTGGT 58.445 40.909 0.00 0.00 37.59 4.16
202 203 3.611057 GCTGTTCATTGAGAGCAAAGTGG 60.611 47.826 12.53 0.00 37.00 4.00
203 204 3.562505 GCTGTTCATTGAGAGCAAAGTG 58.437 45.455 12.53 0.00 37.00 3.16
204 205 2.225019 CGCTGTTCATTGAGAGCAAAGT 59.775 45.455 15.93 0.00 37.00 2.66
205 206 2.225019 ACGCTGTTCATTGAGAGCAAAG 59.775 45.455 15.93 6.25 37.00 2.77
206 207 2.221169 ACGCTGTTCATTGAGAGCAAA 58.779 42.857 15.93 0.00 37.00 3.68
207 208 1.882912 ACGCTGTTCATTGAGAGCAA 58.117 45.000 15.93 0.00 37.00 3.91
208 209 1.800586 GAACGCTGTTCATTGAGAGCA 59.199 47.619 15.93 4.72 36.00 4.26
209 210 2.072298 AGAACGCTGTTCATTGAGAGC 58.928 47.619 18.86 8.88 0.00 4.09
210 211 3.320626 TCAGAACGCTGTTCATTGAGAG 58.679 45.455 18.86 0.00 42.84 3.20
211 212 3.243873 ACTCAGAACGCTGTTCATTGAGA 60.244 43.478 27.24 15.81 42.84 3.27
212 213 3.062763 ACTCAGAACGCTGTTCATTGAG 58.937 45.455 23.22 23.22 42.84 3.02
213 214 3.111853 ACTCAGAACGCTGTTCATTGA 57.888 42.857 18.86 14.37 42.84 2.57
214 215 3.885484 AACTCAGAACGCTGTTCATTG 57.115 42.857 18.86 11.78 42.84 2.82
215 216 3.876914 TCAAACTCAGAACGCTGTTCATT 59.123 39.130 18.86 8.39 42.84 2.57
216 217 3.466836 TCAAACTCAGAACGCTGTTCAT 58.533 40.909 18.86 6.11 42.84 2.57
217 218 2.899976 TCAAACTCAGAACGCTGTTCA 58.100 42.857 18.86 3.77 42.84 3.18
218 219 3.944422 TTCAAACTCAGAACGCTGTTC 57.056 42.857 11.79 11.79 42.84 3.18
219 220 4.024556 CAGATTCAAACTCAGAACGCTGTT 60.025 41.667 0.00 0.00 42.84 3.16
220 221 3.496130 CAGATTCAAACTCAGAACGCTGT 59.504 43.478 0.00 0.00 42.84 4.40
221 222 3.496130 ACAGATTCAAACTCAGAACGCTG 59.504 43.478 0.00 0.00 43.67 5.18
222 223 3.733337 ACAGATTCAAACTCAGAACGCT 58.267 40.909 0.00 0.00 0.00 5.07
223 224 4.214437 CAACAGATTCAAACTCAGAACGC 58.786 43.478 0.00 0.00 0.00 4.84
224 225 5.006649 TGACAACAGATTCAAACTCAGAACG 59.993 40.000 0.00 0.00 0.00 3.95
225 226 6.037610 AGTGACAACAGATTCAAACTCAGAAC 59.962 38.462 0.00 0.00 0.00 3.01
226 227 6.037500 CAGTGACAACAGATTCAAACTCAGAA 59.962 38.462 0.00 0.00 0.00 3.02
227 228 5.525012 CAGTGACAACAGATTCAAACTCAGA 59.475 40.000 0.00 0.00 0.00 3.27
228 229 5.525012 TCAGTGACAACAGATTCAAACTCAG 59.475 40.000 0.00 0.00 0.00 3.35
229 230 5.427378 TCAGTGACAACAGATTCAAACTCA 58.573 37.500 0.00 0.00 0.00 3.41
230 231 5.991328 TCAGTGACAACAGATTCAAACTC 57.009 39.130 0.00 0.00 0.00 3.01
231 232 6.757897 TTTCAGTGACAACAGATTCAAACT 57.242 33.333 0.00 0.00 0.00 2.66
232 233 6.020360 GCTTTTCAGTGACAACAGATTCAAAC 60.020 38.462 0.00 0.00 0.00 2.93
233 234 6.035843 GCTTTTCAGTGACAACAGATTCAAA 58.964 36.000 0.00 0.00 0.00 2.69
234 235 5.125257 TGCTTTTCAGTGACAACAGATTCAA 59.875 36.000 0.00 0.00 0.00 2.69
235 236 4.639755 TGCTTTTCAGTGACAACAGATTCA 59.360 37.500 0.00 0.00 0.00 2.57
236 237 4.972440 GTGCTTTTCAGTGACAACAGATTC 59.028 41.667 0.00 0.00 0.00 2.52
237 238 4.398988 TGTGCTTTTCAGTGACAACAGATT 59.601 37.500 0.00 0.00 0.00 2.40
238 239 3.947196 TGTGCTTTTCAGTGACAACAGAT 59.053 39.130 0.00 0.00 0.00 2.90
239 240 3.126858 GTGTGCTTTTCAGTGACAACAGA 59.873 43.478 0.00 0.00 0.00 3.41
240 241 3.429085 GTGTGCTTTTCAGTGACAACAG 58.571 45.455 0.00 0.00 0.00 3.16
241 242 2.163412 GGTGTGCTTTTCAGTGACAACA 59.837 45.455 0.00 0.00 0.00 3.33
242 243 2.479560 GGGTGTGCTTTTCAGTGACAAC 60.480 50.000 0.00 0.00 0.00 3.32
243 244 1.748493 GGGTGTGCTTTTCAGTGACAA 59.252 47.619 0.00 0.00 0.00 3.18
244 245 1.340502 TGGGTGTGCTTTTCAGTGACA 60.341 47.619 0.00 0.00 0.00 3.58
245 246 1.065551 GTGGGTGTGCTTTTCAGTGAC 59.934 52.381 0.00 0.00 0.00 3.67
246 247 1.388547 GTGGGTGTGCTTTTCAGTGA 58.611 50.000 0.00 0.00 0.00 3.41
247 248 0.029300 CGTGGGTGTGCTTTTCAGTG 59.971 55.000 0.00 0.00 0.00 3.66
248 249 1.101049 CCGTGGGTGTGCTTTTCAGT 61.101 55.000 0.00 0.00 0.00 3.41
249 250 1.654220 CCGTGGGTGTGCTTTTCAG 59.346 57.895 0.00 0.00 0.00 3.02
250 251 1.826054 CCCGTGGGTGTGCTTTTCA 60.826 57.895 0.00 0.00 0.00 2.69
251 252 3.039134 CCCGTGGGTGTGCTTTTC 58.961 61.111 0.00 0.00 0.00 2.29
261 262 0.956410 TACGATTTTGCACCCGTGGG 60.956 55.000 2.58 2.58 42.03 4.61
262 263 0.446222 CTACGATTTTGCACCCGTGG 59.554 55.000 10.76 5.54 36.58 4.94
263 264 0.446222 CCTACGATTTTGCACCCGTG 59.554 55.000 10.76 0.00 36.58 4.94
264 265 0.035739 ACCTACGATTTTGCACCCGT 59.964 50.000 0.00 6.98 38.82 5.28
265 266 1.129811 GAACCTACGATTTTGCACCCG 59.870 52.381 0.00 0.00 0.00 5.28
266 267 2.433436 AGAACCTACGATTTTGCACCC 58.567 47.619 0.00 0.00 0.00 4.61
267 268 3.621715 CCTAGAACCTACGATTTTGCACC 59.378 47.826 0.00 0.00 0.00 5.01
268 269 4.501071 TCCTAGAACCTACGATTTTGCAC 58.499 43.478 0.00 0.00 0.00 4.57
269 270 4.382685 CCTCCTAGAACCTACGATTTTGCA 60.383 45.833 0.00 0.00 0.00 4.08
270 271 4.120589 CCTCCTAGAACCTACGATTTTGC 58.879 47.826 0.00 0.00 0.00 3.68
271 272 5.109903 CACCTCCTAGAACCTACGATTTTG 58.890 45.833 0.00 0.00 0.00 2.44
272 273 4.161754 CCACCTCCTAGAACCTACGATTTT 59.838 45.833 0.00 0.00 0.00 1.82
273 274 3.705072 CCACCTCCTAGAACCTACGATTT 59.295 47.826 0.00 0.00 0.00 2.17
274 275 3.297736 CCACCTCCTAGAACCTACGATT 58.702 50.000 0.00 0.00 0.00 3.34
275 276 2.946785 CCACCTCCTAGAACCTACGAT 58.053 52.381 0.00 0.00 0.00 3.73
276 277 1.684248 GCCACCTCCTAGAACCTACGA 60.684 57.143 0.00 0.00 0.00 3.43
277 278 0.745468 GCCACCTCCTAGAACCTACG 59.255 60.000 0.00 0.00 0.00 3.51
278 279 2.162264 AGCCACCTCCTAGAACCTAC 57.838 55.000 0.00 0.00 0.00 3.18
279 280 2.467880 CAAGCCACCTCCTAGAACCTA 58.532 52.381 0.00 0.00 0.00 3.08
280 281 1.280457 CAAGCCACCTCCTAGAACCT 58.720 55.000 0.00 0.00 0.00 3.50
281 282 0.393132 GCAAGCCACCTCCTAGAACC 60.393 60.000 0.00 0.00 0.00 3.62
282 283 0.615850 AGCAAGCCACCTCCTAGAAC 59.384 55.000 0.00 0.00 0.00 3.01
283 284 0.615331 CAGCAAGCCACCTCCTAGAA 59.385 55.000 0.00 0.00 0.00 2.10
284 285 1.903877 GCAGCAAGCCACCTCCTAGA 61.904 60.000 0.00 0.00 37.23 2.43
285 286 1.451028 GCAGCAAGCCACCTCCTAG 60.451 63.158 0.00 0.00 37.23 3.02
286 287 2.189191 CTGCAGCAAGCCACCTCCTA 62.189 60.000 0.00 0.00 44.83 2.94
287 288 3.564345 CTGCAGCAAGCCACCTCCT 62.564 63.158 0.00 0.00 44.83 3.69
288 289 3.060615 CTGCAGCAAGCCACCTCC 61.061 66.667 0.00 0.00 44.83 4.30
289 290 3.060615 CCTGCAGCAAGCCACCTC 61.061 66.667 8.66 0.00 44.83 3.85
290 291 3.573229 TCCTGCAGCAAGCCACCT 61.573 61.111 8.66 0.00 44.83 4.00
291 292 3.368571 GTCCTGCAGCAAGCCACC 61.369 66.667 8.66 0.00 44.83 4.61
292 293 1.900498 AAGTCCTGCAGCAAGCCAC 60.900 57.895 8.66 0.00 44.83 5.01
293 294 1.900016 CAAGTCCTGCAGCAAGCCA 60.900 57.895 8.66 0.00 44.83 4.75
294 295 1.601759 TCAAGTCCTGCAGCAAGCC 60.602 57.895 8.66 0.00 44.83 4.35
295 296 1.168407 TGTCAAGTCCTGCAGCAAGC 61.168 55.000 8.66 0.00 45.96 4.01
296 297 0.873054 CTGTCAAGTCCTGCAGCAAG 59.127 55.000 8.66 0.00 0.00 4.01
297 298 0.181114 ACTGTCAAGTCCTGCAGCAA 59.819 50.000 8.66 0.00 34.44 3.91
298 299 0.250038 GACTGTCAAGTCCTGCAGCA 60.250 55.000 8.66 0.00 46.15 4.41
299 300 2.537863 GACTGTCAAGTCCTGCAGC 58.462 57.895 8.66 0.00 46.15 5.25
312 313 4.755123 CGGGTAATTTTTGAGACAGACTGT 59.245 41.667 8.12 8.12 0.00 3.55
313 314 4.154195 CCGGGTAATTTTTGAGACAGACTG 59.846 45.833 0.00 0.00 0.00 3.51
314 315 4.324267 CCGGGTAATTTTTGAGACAGACT 58.676 43.478 0.00 0.00 0.00 3.24
315 316 3.119955 GCCGGGTAATTTTTGAGACAGAC 60.120 47.826 2.18 0.00 0.00 3.51
316 317 3.078837 GCCGGGTAATTTTTGAGACAGA 58.921 45.455 2.18 0.00 0.00 3.41
317 318 2.163613 GGCCGGGTAATTTTTGAGACAG 59.836 50.000 2.18 0.00 0.00 3.51
318 319 2.164338 GGCCGGGTAATTTTTGAGACA 58.836 47.619 2.18 0.00 0.00 3.41
319 320 2.094906 GTGGCCGGGTAATTTTTGAGAC 60.095 50.000 2.18 0.00 0.00 3.36
320 321 2.164338 GTGGCCGGGTAATTTTTGAGA 58.836 47.619 2.18 0.00 0.00 3.27
321 322 1.203758 GGTGGCCGGGTAATTTTTGAG 59.796 52.381 2.18 0.00 0.00 3.02
322 323 1.258676 GGTGGCCGGGTAATTTTTGA 58.741 50.000 2.18 0.00 0.00 2.69
323 324 0.248012 GGGTGGCCGGGTAATTTTTG 59.752 55.000 2.18 0.00 0.00 2.44
324 325 0.905809 GGGGTGGCCGGGTAATTTTT 60.906 55.000 2.18 0.00 0.00 1.94
325 326 1.305465 GGGGTGGCCGGGTAATTTT 60.305 57.895 2.18 0.00 0.00 1.82
326 327 2.361375 GGGGTGGCCGGGTAATTT 59.639 61.111 2.18 0.00 0.00 1.82
327 328 3.746436 GGGGGTGGCCGGGTAATT 61.746 66.667 2.18 0.00 0.00 1.40
337 338 3.260100 AGACAGGCTTGGGGGTGG 61.260 66.667 0.00 0.00 0.00 4.61
338 339 2.034687 CAGACAGGCTTGGGGGTG 59.965 66.667 0.00 0.00 0.00 4.61
339 340 3.971702 GCAGACAGGCTTGGGGGT 61.972 66.667 0.00 0.00 0.00 4.95
340 341 4.748144 GGCAGACAGGCTTGGGGG 62.748 72.222 0.00 0.00 40.24 5.40
341 342 4.748144 GGGCAGACAGGCTTGGGG 62.748 72.222 0.00 0.00 43.56 4.96
342 343 3.970410 TGGGCAGACAGGCTTGGG 61.970 66.667 0.00 0.00 43.56 4.12
343 344 2.674380 GTGGGCAGACAGGCTTGG 60.674 66.667 0.00 0.00 43.56 3.61
344 345 1.673665 GAGTGGGCAGACAGGCTTG 60.674 63.158 0.00 0.00 43.56 4.01
345 346 2.753029 GAGTGGGCAGACAGGCTT 59.247 61.111 0.00 0.00 43.56 4.35
346 347 3.699894 CGAGTGGGCAGACAGGCT 61.700 66.667 0.00 0.00 43.56 4.58
347 348 3.695606 TCGAGTGGGCAGACAGGC 61.696 66.667 0.00 0.00 43.27 4.85
348 349 2.262915 GTCGAGTGGGCAGACAGG 59.737 66.667 0.00 0.00 35.19 4.00
349 350 1.080230 CAGTCGAGTGGGCAGACAG 60.080 63.158 12.66 0.00 37.36 3.51
350 351 3.051210 CAGTCGAGTGGGCAGACA 58.949 61.111 12.66 0.00 37.36 3.41
351 352 2.433318 GCAGTCGAGTGGGCAGAC 60.433 66.667 21.39 0.03 35.30 3.51
352 353 2.210013 AAGCAGTCGAGTGGGCAGA 61.210 57.895 21.39 0.00 0.00 4.26
353 354 2.031516 CAAGCAGTCGAGTGGGCAG 61.032 63.158 21.39 2.07 0.00 4.85
354 355 2.031012 CAAGCAGTCGAGTGGGCA 59.969 61.111 21.39 0.00 0.00 5.36
355 356 2.167398 TACCAAGCAGTCGAGTGGGC 62.167 60.000 21.39 8.38 35.32 5.36
356 357 0.389948 GTACCAAGCAGTCGAGTGGG 60.390 60.000 21.39 15.90 35.32 4.61
357 358 0.317160 TGTACCAAGCAGTCGAGTGG 59.683 55.000 21.39 7.55 37.17 4.00
358 359 1.269723 TCTGTACCAAGCAGTCGAGTG 59.730 52.381 16.15 16.15 35.60 3.51
359 360 1.542030 CTCTGTACCAAGCAGTCGAGT 59.458 52.381 0.00 0.00 35.60 4.18
360 361 1.734047 GCTCTGTACCAAGCAGTCGAG 60.734 57.143 10.74 0.00 38.42 4.04
361 362 0.243907 GCTCTGTACCAAGCAGTCGA 59.756 55.000 10.74 0.00 38.42 4.20
362 363 0.244994 AGCTCTGTACCAAGCAGTCG 59.755 55.000 16.28 0.00 41.06 4.18
363 364 2.755655 TCTAGCTCTGTACCAAGCAGTC 59.244 50.000 16.28 0.00 41.06 3.51
364 365 2.757868 CTCTAGCTCTGTACCAAGCAGT 59.242 50.000 16.28 2.57 41.06 4.40
365 366 2.757868 ACTCTAGCTCTGTACCAAGCAG 59.242 50.000 16.28 11.90 41.06 4.24
366 367 2.808919 ACTCTAGCTCTGTACCAAGCA 58.191 47.619 16.28 4.69 41.06 3.91
367 368 3.878160 AACTCTAGCTCTGTACCAAGC 57.122 47.619 8.19 8.19 38.84 4.01
368 369 5.392767 TGAAACTCTAGCTCTGTACCAAG 57.607 43.478 0.00 0.00 0.00 3.61
369 370 4.322049 GCTGAAACTCTAGCTCTGTACCAA 60.322 45.833 0.00 0.00 36.99 3.67
370 371 3.193691 GCTGAAACTCTAGCTCTGTACCA 59.806 47.826 0.00 0.00 36.99 3.25
371 372 3.193691 TGCTGAAACTCTAGCTCTGTACC 59.806 47.826 0.00 0.00 40.52 3.34
372 373 4.442375 TGCTGAAACTCTAGCTCTGTAC 57.558 45.455 0.00 0.00 40.52 2.90
373 374 4.464244 ACATGCTGAAACTCTAGCTCTGTA 59.536 41.667 0.00 0.00 40.52 2.74
374 375 3.260380 ACATGCTGAAACTCTAGCTCTGT 59.740 43.478 0.00 0.00 40.52 3.41
375 376 3.859443 ACATGCTGAAACTCTAGCTCTG 58.141 45.455 0.00 0.00 40.52 3.35
376 377 5.667539 TTACATGCTGAAACTCTAGCTCT 57.332 39.130 0.00 0.00 40.52 4.09
377 378 5.220567 GCTTTACATGCTGAAACTCTAGCTC 60.221 44.000 0.00 0.00 40.52 4.09
378 379 4.633565 GCTTTACATGCTGAAACTCTAGCT 59.366 41.667 0.00 0.00 40.52 3.32
379 380 4.393062 TGCTTTACATGCTGAAACTCTAGC 59.607 41.667 0.00 0.00 40.29 3.42
380 381 5.641209 ACTGCTTTACATGCTGAAACTCTAG 59.359 40.000 0.00 0.00 34.27 2.43
381 382 5.551233 ACTGCTTTACATGCTGAAACTCTA 58.449 37.500 0.00 0.00 34.27 2.43
382 383 4.392940 ACTGCTTTACATGCTGAAACTCT 58.607 39.130 0.00 0.00 34.27 3.24
383 384 4.667668 CGACTGCTTTACATGCTGAAACTC 60.668 45.833 0.00 0.00 34.27 3.01
384 385 3.187227 CGACTGCTTTACATGCTGAAACT 59.813 43.478 0.00 0.00 34.27 2.66
385 386 3.186409 TCGACTGCTTTACATGCTGAAAC 59.814 43.478 0.00 0.00 34.27 2.78
386 387 3.186409 GTCGACTGCTTTACATGCTGAAA 59.814 43.478 8.70 0.00 34.27 2.69
387 388 2.736721 GTCGACTGCTTTACATGCTGAA 59.263 45.455 8.70 0.00 34.27 3.02
388 389 2.288763 TGTCGACTGCTTTACATGCTGA 60.289 45.455 17.92 0.00 34.27 4.26
389 390 2.068519 TGTCGACTGCTTTACATGCTG 58.931 47.619 17.92 0.00 35.85 4.41
390 391 2.069273 GTGTCGACTGCTTTACATGCT 58.931 47.619 17.92 0.00 0.00 3.79
391 392 1.798223 TGTGTCGACTGCTTTACATGC 59.202 47.619 17.92 0.00 0.00 4.06
392 393 2.157668 GGTGTGTCGACTGCTTTACATG 59.842 50.000 17.92 0.00 0.00 3.21
393 394 2.224185 TGGTGTGTCGACTGCTTTACAT 60.224 45.455 17.92 0.00 0.00 2.29
394 395 1.137282 TGGTGTGTCGACTGCTTTACA 59.863 47.619 17.92 8.59 0.00 2.41
395 396 1.860676 TGGTGTGTCGACTGCTTTAC 58.139 50.000 17.92 5.80 0.00 2.01
396 397 2.412870 CATGGTGTGTCGACTGCTTTA 58.587 47.619 17.92 0.00 0.00 1.85
397 398 1.229428 CATGGTGTGTCGACTGCTTT 58.771 50.000 17.92 0.00 0.00 3.51
398 399 1.230635 GCATGGTGTGTCGACTGCTT 61.231 55.000 17.92 0.00 0.00 3.91
399 400 1.669115 GCATGGTGTGTCGACTGCT 60.669 57.895 17.92 0.00 0.00 4.24
400 401 1.230635 AAGCATGGTGTGTCGACTGC 61.231 55.000 17.92 16.37 0.00 4.40
401 402 1.995484 CTAAGCATGGTGTGTCGACTG 59.005 52.381 17.92 6.49 0.00 3.51
402 403 1.673033 GCTAAGCATGGTGTGTCGACT 60.673 52.381 17.92 0.00 0.00 4.18
403 404 0.721718 GCTAAGCATGGTGTGTCGAC 59.278 55.000 9.11 9.11 0.00 4.20
404 405 0.608130 AGCTAAGCATGGTGTGTCGA 59.392 50.000 0.00 0.00 0.00 4.20
405 406 2.159240 TCTAGCTAAGCATGGTGTGTCG 60.159 50.000 0.00 0.00 0.00 4.35
406 407 3.118956 ACTCTAGCTAAGCATGGTGTGTC 60.119 47.826 0.00 0.00 0.00 3.67
407 408 2.834549 ACTCTAGCTAAGCATGGTGTGT 59.165 45.455 0.00 0.00 0.00 3.72
408 409 3.533606 ACTCTAGCTAAGCATGGTGTG 57.466 47.619 0.00 0.00 0.00 3.82
409 410 4.020218 TCAAACTCTAGCTAAGCATGGTGT 60.020 41.667 0.00 0.00 0.00 4.16
410 411 4.507710 TCAAACTCTAGCTAAGCATGGTG 58.492 43.478 0.00 0.00 0.00 4.17
411 412 4.467795 TCTCAAACTCTAGCTAAGCATGGT 59.532 41.667 0.00 0.00 0.00 3.55
412 413 5.016051 TCTCAAACTCTAGCTAAGCATGG 57.984 43.478 0.00 0.00 0.00 3.66
413 414 6.336566 TCTTCTCAAACTCTAGCTAAGCATG 58.663 40.000 0.00 0.00 0.00 4.06
414 415 6.537453 TCTTCTCAAACTCTAGCTAAGCAT 57.463 37.500 0.00 0.00 0.00 3.79
415 416 5.984695 TCTTCTCAAACTCTAGCTAAGCA 57.015 39.130 0.00 0.00 0.00 3.91
416 417 6.310224 CAGTTCTTCTCAAACTCTAGCTAAGC 59.690 42.308 0.00 0.00 34.79 3.09
417 418 6.310224 GCAGTTCTTCTCAAACTCTAGCTAAG 59.690 42.308 0.00 0.00 34.79 2.18
418 419 6.015010 AGCAGTTCTTCTCAAACTCTAGCTAA 60.015 38.462 0.00 0.00 33.96 3.09
419 420 5.478679 AGCAGTTCTTCTCAAACTCTAGCTA 59.521 40.000 0.00 0.00 33.96 3.32
420 421 4.283212 AGCAGTTCTTCTCAAACTCTAGCT 59.717 41.667 0.00 0.00 34.79 3.32
421 422 4.565022 AGCAGTTCTTCTCAAACTCTAGC 58.435 43.478 0.00 0.00 34.79 3.42
422 423 7.375053 AGTTAGCAGTTCTTCTCAAACTCTAG 58.625 38.462 0.00 0.00 34.79 2.43
423 424 7.291411 AGTTAGCAGTTCTTCTCAAACTCTA 57.709 36.000 0.00 0.00 34.79 2.43
424 425 6.168270 AGTTAGCAGTTCTTCTCAAACTCT 57.832 37.500 0.00 0.00 34.79 3.24
425 426 6.480320 TCAAGTTAGCAGTTCTTCTCAAACTC 59.520 38.462 0.00 0.00 34.79 3.01
426 427 6.349300 TCAAGTTAGCAGTTCTTCTCAAACT 58.651 36.000 0.00 0.00 37.44 2.66
427 428 6.604735 TCAAGTTAGCAGTTCTTCTCAAAC 57.395 37.500 0.00 0.00 0.00 2.93
428 429 7.807977 AATCAAGTTAGCAGTTCTTCTCAAA 57.192 32.000 0.00 0.00 0.00 2.69
429 430 7.931407 TGTAATCAAGTTAGCAGTTCTTCTCAA 59.069 33.333 0.00 0.00 0.00 3.02
430 431 7.385205 GTGTAATCAAGTTAGCAGTTCTTCTCA 59.615 37.037 0.00 0.00 0.00 3.27
431 432 7.385205 TGTGTAATCAAGTTAGCAGTTCTTCTC 59.615 37.037 0.00 0.00 0.00 2.87
432 433 7.217200 TGTGTAATCAAGTTAGCAGTTCTTCT 58.783 34.615 0.00 0.00 0.00 2.85
433 434 7.421530 TGTGTAATCAAGTTAGCAGTTCTTC 57.578 36.000 0.00 0.00 0.00 2.87
434 435 7.661437 TCATGTGTAATCAAGTTAGCAGTTCTT 59.339 33.333 0.00 0.00 0.00 2.52
435 436 7.161404 TCATGTGTAATCAAGTTAGCAGTTCT 58.839 34.615 0.00 0.00 0.00 3.01
436 437 7.364522 TCATGTGTAATCAAGTTAGCAGTTC 57.635 36.000 0.00 0.00 0.00 3.01
437 438 7.744087 TTCATGTGTAATCAAGTTAGCAGTT 57.256 32.000 0.00 0.00 0.00 3.16
438 439 7.744087 TTTCATGTGTAATCAAGTTAGCAGT 57.256 32.000 0.00 0.00 0.00 4.40
439 440 8.453320 TCATTTCATGTGTAATCAAGTTAGCAG 58.547 33.333 0.00 0.00 0.00 4.24
440 441 8.236586 GTCATTTCATGTGTAATCAAGTTAGCA 58.763 33.333 0.00 0.00 0.00 3.49
441 442 8.236586 TGTCATTTCATGTGTAATCAAGTTAGC 58.763 33.333 0.00 0.00 0.00 3.09
445 446 8.400947 GCTATGTCATTTCATGTGTAATCAAGT 58.599 33.333 0.00 0.00 0.00 3.16
446 447 7.585210 CGCTATGTCATTTCATGTGTAATCAAG 59.415 37.037 0.00 0.00 0.00 3.02
447 448 7.279758 TCGCTATGTCATTTCATGTGTAATCAA 59.720 33.333 0.00 0.00 0.00 2.57
448 449 6.760770 TCGCTATGTCATTTCATGTGTAATCA 59.239 34.615 0.00 0.00 0.00 2.57
449 450 7.065894 GTCGCTATGTCATTTCATGTGTAATC 58.934 38.462 0.00 0.00 0.00 1.75
450 451 6.538381 TGTCGCTATGTCATTTCATGTGTAAT 59.462 34.615 0.00 0.00 0.00 1.89
451 452 5.872070 TGTCGCTATGTCATTTCATGTGTAA 59.128 36.000 0.00 0.00 0.00 2.41
452 453 5.290885 GTGTCGCTATGTCATTTCATGTGTA 59.709 40.000 0.00 0.00 0.00 2.90
453 454 4.093408 GTGTCGCTATGTCATTTCATGTGT 59.907 41.667 0.00 0.00 0.00 3.72
454 455 4.581493 GTGTCGCTATGTCATTTCATGTG 58.419 43.478 0.00 0.00 0.00 3.21
455 456 3.306973 CGTGTCGCTATGTCATTTCATGT 59.693 43.478 0.00 0.00 0.00 3.21
456 457 3.302675 CCGTGTCGCTATGTCATTTCATG 60.303 47.826 0.00 0.00 0.00 3.07
457 458 2.866156 CCGTGTCGCTATGTCATTTCAT 59.134 45.455 0.00 0.00 0.00 2.57
458 459 2.094442 TCCGTGTCGCTATGTCATTTCA 60.094 45.455 0.00 0.00 0.00 2.69
459 460 2.535984 CTCCGTGTCGCTATGTCATTTC 59.464 50.000 0.00 0.00 0.00 2.17
460 461 2.540515 CTCCGTGTCGCTATGTCATTT 58.459 47.619 0.00 0.00 0.00 2.32
461 462 1.202417 CCTCCGTGTCGCTATGTCATT 60.202 52.381 0.00 0.00 0.00 2.57
462 463 0.385751 CCTCCGTGTCGCTATGTCAT 59.614 55.000 0.00 0.00 0.00 3.06
463 464 0.678684 TCCTCCGTGTCGCTATGTCA 60.679 55.000 0.00 0.00 0.00 3.58
464 465 0.454600 TTCCTCCGTGTCGCTATGTC 59.545 55.000 0.00 0.00 0.00 3.06
465 466 0.456221 CTTCCTCCGTGTCGCTATGT 59.544 55.000 0.00 0.00 0.00 2.29
466 467 0.738975 TCTTCCTCCGTGTCGCTATG 59.261 55.000 0.00 0.00 0.00 2.23
467 468 1.025812 CTCTTCCTCCGTGTCGCTAT 58.974 55.000 0.00 0.00 0.00 2.97
468 469 0.035725 TCTCTTCCTCCGTGTCGCTA 60.036 55.000 0.00 0.00 0.00 4.26
469 470 0.894184 TTCTCTTCCTCCGTGTCGCT 60.894 55.000 0.00 0.00 0.00 4.93
470 471 0.038526 TTTCTCTTCCTCCGTGTCGC 60.039 55.000 0.00 0.00 0.00 5.19
471 472 1.699343 GTTTCTCTTCCTCCGTGTCG 58.301 55.000 0.00 0.00 0.00 4.35
472 473 1.000496 ACGTTTCTCTTCCTCCGTGTC 60.000 52.381 0.00 0.00 0.00 3.67
473 474 1.038280 ACGTTTCTCTTCCTCCGTGT 58.962 50.000 0.00 0.00 0.00 4.49
474 475 1.000607 TCACGTTTCTCTTCCTCCGTG 60.001 52.381 0.00 0.00 44.97 4.94
475 476 1.325355 TCACGTTTCTCTTCCTCCGT 58.675 50.000 0.00 0.00 0.00 4.69
476 477 2.263077 CATCACGTTTCTCTTCCTCCG 58.737 52.381 0.00 0.00 0.00 4.63
477 478 2.003301 GCATCACGTTTCTCTTCCTCC 58.997 52.381 0.00 0.00 0.00 4.30
478 479 2.926838 GAGCATCACGTTTCTCTTCCTC 59.073 50.000 0.00 0.00 33.17 3.71
479 480 2.672478 CGAGCATCACGTTTCTCTTCCT 60.672 50.000 0.00 0.00 33.17 3.36
480 481 1.656095 CGAGCATCACGTTTCTCTTCC 59.344 52.381 0.00 0.00 33.17 3.46
481 482 1.059835 GCGAGCATCACGTTTCTCTTC 59.940 52.381 0.00 0.00 33.17 2.87
482 483 1.071605 GCGAGCATCACGTTTCTCTT 58.928 50.000 0.00 0.00 33.17 2.85
483 484 0.038251 TGCGAGCATCACGTTTCTCT 60.038 50.000 0.00 0.00 33.17 3.10
484 485 0.790207 TTGCGAGCATCACGTTTCTC 59.210 50.000 0.00 0.00 33.17 2.87
485 486 0.792640 CTTGCGAGCATCACGTTTCT 59.207 50.000 0.00 0.00 33.17 2.52
486 487 0.790207 TCTTGCGAGCATCACGTTTC 59.210 50.000 0.00 0.00 33.17 2.78
487 488 0.792640 CTCTTGCGAGCATCACGTTT 59.207 50.000 0.00 0.00 33.17 3.60
488 489 0.319900 ACTCTTGCGAGCATCACGTT 60.320 50.000 0.00 0.00 41.09 3.99
489 490 0.319900 AACTCTTGCGAGCATCACGT 60.320 50.000 0.00 0.00 41.09 4.49
490 491 0.094216 CAACTCTTGCGAGCATCACG 59.906 55.000 0.00 0.00 41.09 4.35
491 492 0.445436 CCAACTCTTGCGAGCATCAC 59.555 55.000 0.00 0.00 41.09 3.06
492 493 0.035317 ACCAACTCTTGCGAGCATCA 59.965 50.000 0.00 0.00 41.09 3.07
493 494 1.129437 GAACCAACTCTTGCGAGCATC 59.871 52.381 0.00 0.00 41.09 3.91
494 495 1.160137 GAACCAACTCTTGCGAGCAT 58.840 50.000 0.00 0.00 41.09 3.79
495 496 1.221466 CGAACCAACTCTTGCGAGCA 61.221 55.000 0.00 0.00 41.09 4.26
496 497 1.493311 CGAACCAACTCTTGCGAGC 59.507 57.895 0.00 0.00 41.09 5.03
497 498 0.319555 TCCGAACCAACTCTTGCGAG 60.320 55.000 0.00 0.00 43.10 5.03
498 499 0.599204 GTCCGAACCAACTCTTGCGA 60.599 55.000 0.00 0.00 0.00 5.10
499 500 0.600255 AGTCCGAACCAACTCTTGCG 60.600 55.000 0.00 0.00 0.00 4.85
500 501 1.149148 GAGTCCGAACCAACTCTTGC 58.851 55.000 0.00 0.00 39.06 4.01
501 502 1.797025 GGAGTCCGAACCAACTCTTG 58.203 55.000 0.00 0.00 41.34 3.02
762 763 3.432252 CCTTTTTCTTGCGAGTACGTCAT 59.568 43.478 0.00 0.00 41.98 3.06
763 764 2.798283 CCTTTTTCTTGCGAGTACGTCA 59.202 45.455 0.00 0.00 41.98 4.35
764 765 3.054878 TCCTTTTTCTTGCGAGTACGTC 58.945 45.455 0.00 0.00 41.98 4.34
765 766 3.102052 TCCTTTTTCTTGCGAGTACGT 57.898 42.857 0.00 0.00 41.98 3.57
766 767 4.461992 TTTCCTTTTTCTTGCGAGTACG 57.538 40.909 0.00 0.00 42.93 3.67
794 795 4.154918 GCACGACATCTCCATCTTCTTTTT 59.845 41.667 0.00 0.00 0.00 1.94
795 796 3.686726 GCACGACATCTCCATCTTCTTTT 59.313 43.478 0.00 0.00 0.00 2.27
796 797 3.265791 GCACGACATCTCCATCTTCTTT 58.734 45.455 0.00 0.00 0.00 2.52
797 798 2.234661 TGCACGACATCTCCATCTTCTT 59.765 45.455 0.00 0.00 0.00 2.52
798 799 1.827344 TGCACGACATCTCCATCTTCT 59.173 47.619 0.00 0.00 0.00 2.85
799 800 2.299993 TGCACGACATCTCCATCTTC 57.700 50.000 0.00 0.00 0.00 2.87
800 801 2.768253 TTGCACGACATCTCCATCTT 57.232 45.000 0.00 0.00 0.00 2.40
825 826 1.656818 ATGCATGGTTACCGCTGCAC 61.657 55.000 26.23 4.60 43.79 4.57
830 831 2.024588 CGCATGCATGGTTACCGC 59.975 61.111 27.34 10.65 0.00 5.68
832 833 2.120909 AGGCGCATGCATGGTTACC 61.121 57.895 27.34 13.56 45.35 2.85
942 966 1.521616 GCAGCAGGCTTAGAGCTCT 59.478 57.895 22.17 22.17 41.99 4.09
955 979 1.376424 GTAAGCAGGAGCAGCAGCA 60.376 57.895 3.17 0.00 45.49 4.41
982 1006 2.341257 CATCTCTTGGTGACGAACTGG 58.659 52.381 0.00 0.00 0.00 4.00
1110 1160 1.218316 GTACCACAGCTCCGGGAAG 59.782 63.158 0.00 0.00 0.00 3.46
1269 1319 2.755876 AGGGAGTCGATGAGCGCA 60.756 61.111 11.47 0.00 40.61 6.09
1317 1367 2.270850 GTTATGGCGCCCCAGTCA 59.729 61.111 26.77 3.54 46.24 3.41
1366 1416 2.266055 GACCAGAGCCTTCACCCG 59.734 66.667 0.00 0.00 0.00 5.28
1492 1542 5.614324 TGCTTTGCATGGTAGTATCTACT 57.386 39.130 0.00 0.00 35.40 2.57
1587 4981 7.667219 CAGGATCCTACAAATTAGCACCATATT 59.333 37.037 15.67 0.00 0.00 1.28
1609 5007 0.612732 CTGCTTCAATTGCCCCAGGA 60.613 55.000 0.00 0.00 0.00 3.86
1682 5081 1.373570 GATGAACAGTGGGCTAGCAC 58.626 55.000 18.24 14.86 0.00 4.40
1687 5086 1.488705 TTCGGGATGAACAGTGGGCT 61.489 55.000 0.00 0.00 0.00 5.19
1761 5160 2.481568 CGTGTAGTACTTGACGTCCTCA 59.518 50.000 14.12 0.00 0.00 3.86
1812 5211 2.167900 GGCACGGTAGTAGTTGAATCCT 59.832 50.000 0.00 0.00 0.00 3.24
1923 5360 7.013942 AGGTTTGGGTCTTCATGTTTAACTTAC 59.986 37.037 0.00 0.00 0.00 2.34
1933 8836 7.441017 TCAAATTTTAGGTTTGGGTCTTCATG 58.559 34.615 0.00 0.00 37.22 3.07
2151 12386 6.739112 AGTAGTGTTTCCAAAAATCTGAAGC 58.261 36.000 0.00 0.00 0.00 3.86
2264 12501 4.383552 GGTGAACTTGCTCCTGAGACATAT 60.384 45.833 0.00 0.00 0.00 1.78
2356 12621 7.927092 TGAATATGGCATTATTGTGGACAAATG 59.073 33.333 4.78 0.00 39.55 2.32
2430 12754 0.324614 ACTTCACGTGGCATGATGGA 59.675 50.000 17.00 5.11 0.00 3.41
2432 12756 1.536766 ACAACTTCACGTGGCATGATG 59.463 47.619 17.00 8.00 0.00 3.07
2462 12786 6.899089 AGATTGTGGATGATGTACACCATTA 58.101 36.000 3.65 0.00 41.29 1.90
2702 13027 4.241681 TGTTAATGAAATCTTTTGCGCCC 58.758 39.130 4.18 0.00 0.00 6.13
2783 13108 6.594937 GCTTTTCTTCATTTATGAAATGCCCA 59.405 34.615 6.61 0.00 45.26 5.36
2944 13270 3.872771 ACATGTCCGTACTTTTTCAACGT 59.127 39.130 0.00 0.00 34.90 3.99
3007 13334 8.557029 GCAGGTGTAATTATAGTAAACATCACC 58.443 37.037 0.00 0.00 40.96 4.02
3051 13381 2.687935 GTGGAGCAGGTTGTCTCAAAAA 59.312 45.455 0.00 0.00 0.00 1.94
3052 13382 2.092429 AGTGGAGCAGGTTGTCTCAAAA 60.092 45.455 0.00 0.00 0.00 2.44
3053 13383 1.490490 AGTGGAGCAGGTTGTCTCAAA 59.510 47.619 0.00 0.00 0.00 2.69
3054 13384 1.131638 AGTGGAGCAGGTTGTCTCAA 58.868 50.000 0.00 0.00 0.00 3.02
3055 13385 1.131638 AAGTGGAGCAGGTTGTCTCA 58.868 50.000 0.00 0.00 0.00 3.27
3056 13386 1.876156 CAAAGTGGAGCAGGTTGTCTC 59.124 52.381 0.00 0.00 0.00 3.36
3057 13387 1.477558 CCAAAGTGGAGCAGGTTGTCT 60.478 52.381 0.00 0.00 40.96 3.41
3058 13388 0.954452 CCAAAGTGGAGCAGGTTGTC 59.046 55.000 0.00 0.00 40.96 3.18
3059 13389 0.258774 ACCAAAGTGGAGCAGGTTGT 59.741 50.000 0.18 0.00 40.96 3.32
3060 13390 0.670162 CACCAAAGTGGAGCAGGTTG 59.330 55.000 0.18 0.00 40.96 3.77
3061 13391 3.116091 CACCAAAGTGGAGCAGGTT 57.884 52.632 0.18 0.00 40.96 3.50
3062 13392 4.907457 CACCAAAGTGGAGCAGGT 57.093 55.556 0.18 0.00 40.96 4.00
3071 13401 1.202651 CGAGAGGGAACACACCAAAGT 60.203 52.381 0.00 0.00 0.00 2.66
3072 13402 1.202651 ACGAGAGGGAACACACCAAAG 60.203 52.381 0.00 0.00 0.00 2.77
3073 13403 0.834612 ACGAGAGGGAACACACCAAA 59.165 50.000 0.00 0.00 0.00 3.28
3074 13404 0.105964 CACGAGAGGGAACACACCAA 59.894 55.000 0.00 0.00 35.60 3.67
3075 13405 1.745890 CACGAGAGGGAACACACCA 59.254 57.895 0.00 0.00 35.60 4.17
3130 13460 3.119193 CAAACACAGTTGGCGCCT 58.881 55.556 29.70 3.84 0.00 5.52
3132 13462 2.103934 TGCAAACACAGTTGGCGC 59.896 55.556 0.00 0.00 0.00 6.53
3133 13463 3.996073 GTGCAAACACAGTTGGCG 58.004 55.556 4.93 0.00 46.61 5.69
3141 13471 2.351350 CCTTAATCACCCGTGCAAACAC 60.351 50.000 0.00 0.00 43.76 3.32
3142 13472 1.883275 CCTTAATCACCCGTGCAAACA 59.117 47.619 0.00 0.00 0.00 2.83
3144 13474 0.885196 GCCTTAATCACCCGTGCAAA 59.115 50.000 0.00 0.00 0.00 3.68
3146 13476 1.743623 CGCCTTAATCACCCGTGCA 60.744 57.895 0.00 0.00 0.00 4.57
3148 13478 0.390603 TGACGCCTTAATCACCCGTG 60.391 55.000 0.00 0.00 31.65 4.94
3149 13479 0.322322 TTGACGCCTTAATCACCCGT 59.678 50.000 0.00 0.00 34.52 5.28
3150 13480 1.444836 TTTGACGCCTTAATCACCCG 58.555 50.000 0.00 0.00 0.00 5.28
3152 13482 3.003378 GCCTATTTGACGCCTTAATCACC 59.997 47.826 0.00 0.00 0.00 4.02
3154 13484 2.869801 CGCCTATTTGACGCCTTAATCA 59.130 45.455 0.00 0.00 0.00 2.57
3155 13485 2.349532 GCGCCTATTTGACGCCTTAATC 60.350 50.000 0.00 0.00 46.63 1.75
3156 13486 1.602377 GCGCCTATTTGACGCCTTAAT 59.398 47.619 0.00 0.00 46.63 1.40
3254 14005 5.236478 AGAATTGTTCGGTGTTTGTCTACAG 59.764 40.000 0.00 0.00 34.02 2.74
3258 14009 4.514066 GGTAGAATTGTTCGGTGTTTGTCT 59.486 41.667 0.00 0.00 34.02 3.41
3259 14010 4.514066 AGGTAGAATTGTTCGGTGTTTGTC 59.486 41.667 0.00 0.00 34.02 3.18
3261 14012 5.432885 AAGGTAGAATTGTTCGGTGTTTG 57.567 39.130 0.00 0.00 34.02 2.93
3262 14013 4.517832 GGAAGGTAGAATTGTTCGGTGTTT 59.482 41.667 0.00 0.00 34.02 2.83
3305 14069 7.868415 GGTGTTTGGCTATTGTTTTATTACACA 59.132 33.333 0.00 0.00 34.32 3.72
3318 14082 4.522789 AGAATTGTTCGGTGTTTGGCTATT 59.477 37.500 0.00 0.00 34.02 1.73
3371 14137 0.892063 ACCGTGTTGGCTTGTTGTTT 59.108 45.000 0.00 0.00 43.94 2.83
3440 14206 7.970384 TCATTCAGTTCGGTTTTATATGTGTC 58.030 34.615 0.00 0.00 0.00 3.67
3565 14417 0.940991 GAAAAACCTGCCAGCGCAAG 60.941 55.000 11.47 0.00 46.66 4.01
3594 14449 6.391227 ACGACCAAAACAAAATCTCTGAAT 57.609 33.333 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.