Multiple sequence alignment - TraesCS7A01G222300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G222300 chr7A 100.000 3173 0 0 1 3173 191692729 191695901 0.000000e+00 5860.0
1 TraesCS7A01G222300 chr7A 88.051 703 53 11 1057 1732 191665055 191664357 0.000000e+00 804.0
2 TraesCS7A01G222300 chr7A 84.000 500 53 14 1250 1722 152507428 152507927 3.730000e-124 455.0
3 TraesCS7A01G222300 chr7A 82.274 519 55 15 1241 1722 151863043 151863561 6.330000e-112 414.0
4 TraesCS7A01G222300 chr7A 86.154 325 31 6 1893 2203 191664361 191664037 3.920000e-89 339.0
5 TraesCS7A01G222300 chr7A 94.340 53 2 1 2243 2295 191664034 191663983 2.620000e-11 80.5
6 TraesCS7A01G222300 chr7A 97.674 43 1 0 2935 2977 191695600 191695642 1.220000e-09 75.0
7 TraesCS7A01G222300 chr7A 97.674 43 1 0 2872 2914 191695663 191695705 1.220000e-09 75.0
8 TraesCS7A01G222300 chr7B 87.384 967 55 17 2182 3084 154353274 154354237 0.000000e+00 1048.0
9 TraesCS7A01G222300 chr7B 87.853 708 52 14 1057 1736 154161834 154161133 0.000000e+00 800.0
10 TraesCS7A01G222300 chr7B 84.268 642 68 17 92 707 154175345 154175979 2.110000e-166 595.0
11 TraesCS7A01G222300 chr7B 80.910 681 65 24 1889 2508 154178827 154179503 7.960000e-131 477.0
12 TraesCS7A01G222300 chr7B 83.008 512 51 19 1250 1725 113802537 113802026 6.290000e-117 431.0
13 TraesCS7A01G222300 chr7B 82.510 526 55 25 1241 1729 113539546 113539021 8.130000e-116 427.0
14 TraesCS7A01G222300 chr7B 91.700 253 21 0 1888 2140 154161145 154160893 5.040000e-93 351.0
15 TraesCS7A01G222300 chr7B 97.024 168 5 0 1730 1897 498899604 498899437 1.860000e-72 283.0
16 TraesCS7A01G222300 chr7B 93.038 158 11 0 2768 2925 154181277 154181434 6.840000e-57 231.0
17 TraesCS7A01G222300 chr7B 84.000 150 6 3 2936 3067 154181382 154181531 9.240000e-26 128.0
18 TraesCS7A01G222300 chr7B 97.059 68 2 0 3105 3172 154354285 154354352 7.190000e-22 115.0
19 TraesCS7A01G222300 chr7B 95.000 60 3 0 2872 2931 154354066 154354125 9.370000e-16 95.3
20 TraesCS7A01G222300 chr7B 93.878 49 3 0 2935 2983 154354003 154354051 1.220000e-09 75.0
21 TraesCS7A01G222300 chr7B 100.000 32 0 0 1701 1732 154178804 154178835 3.420000e-05 60.2
22 TraesCS7A01G222300 chr7D 88.462 702 48 12 1057 1732 184574503 184573809 0.000000e+00 817.0
23 TraesCS7A01G222300 chr7D 91.327 392 26 5 249 635 184579013 184579401 2.170000e-146 529.0
24 TraesCS7A01G222300 chr7D 81.912 680 59 25 1889 2508 184582237 184582912 1.690000e-142 516.0
25 TraesCS7A01G222300 chr7D 83.400 500 56 5 1250 1725 151791156 151790660 3.760000e-119 438.0
26 TraesCS7A01G222300 chr7D 81.310 519 60 16 1241 1722 151825130 151825648 1.380000e-103 387.0
27 TraesCS7A01G222300 chr7D 83.841 427 45 11 1250 1652 152087269 152087695 4.960000e-103 385.0
28 TraesCS7A01G222300 chr7D 87.538 329 27 6 1889 2203 184573817 184573489 5.000000e-98 368.0
29 TraesCS7A01G222300 chr7D 91.803 183 15 0 762 944 572547689 572547507 4.060000e-64 255.0
30 TraesCS7A01G222300 chr7D 85.650 223 30 2 1901 2122 152087797 152088018 1.900000e-57 233.0
31 TraesCS7A01G222300 chr7D 87.629 194 15 4 2584 2770 184585353 184585544 1.920000e-52 217.0
32 TraesCS7A01G222300 chr7D 89.928 139 12 1 2789 2925 184585649 184585787 9.040000e-41 178.0
33 TraesCS7A01G222300 chr7D 77.670 206 37 9 58 257 414281073 414280871 2.000000e-22 117.0
34 TraesCS7A01G222300 chr7D 81.507 146 9 4 2940 3067 184585739 184585884 1.560000e-18 104.0
35 TraesCS7A01G222300 chr1D 83.367 499 56 10 1255 1729 439414977 439414482 1.350000e-118 436.0
36 TraesCS7A01G222300 chr1D 91.398 186 16 0 761 946 8279358 8279543 4.060000e-64 255.0
37 TraesCS7A01G222300 chr1D 85.714 224 30 2 1900 2122 439414476 439414254 5.290000e-58 235.0
38 TraesCS7A01G222300 chrUn 79.237 708 76 40 1057 1722 85701209 85701887 8.130000e-116 427.0
39 TraesCS7A01G222300 chrUn 80.980 510 60 7 1250 1722 85624759 85625268 1.390000e-98 370.0
40 TraesCS7A01G222300 chrUn 80.897 513 61 7 1250 1725 185555530 185555018 1.390000e-98 370.0
41 TraesCS7A01G222300 chrUn 84.615 221 34 0 1901 2121 477557070 477557290 1.480000e-53 220.0
42 TraesCS7A01G222300 chr2B 98.089 157 3 0 1733 1889 480916724 480916880 1.120000e-69 274.0
43 TraesCS7A01G222300 chr2B 97.452 157 4 0 1733 1889 783873461 783873305 5.220000e-68 268.0
44 TraesCS7A01G222300 chr2B 96.178 157 6 0 1733 1889 783936390 783936234 1.130000e-64 257.0
45 TraesCS7A01G222300 chr5D 92.432 185 14 0 762 946 300161911 300162095 6.750000e-67 265.0
46 TraesCS7A01G222300 chr5D 91.351 185 16 0 762 946 485887417 485887233 1.460000e-63 254.0
47 TraesCS7A01G222300 chr4D 96.835 158 5 0 1732 1889 394485804 394485961 6.750000e-67 265.0
48 TraesCS7A01G222300 chr4B 96.815 157 5 0 1733 1889 31285158 31285314 2.430000e-66 263.0
49 TraesCS7A01G222300 chr6B 96.226 159 6 0 1731 1889 34683374 34683216 8.730000e-66 261.0
50 TraesCS7A01G222300 chr6B 75.490 204 44 4 62 260 617640804 617640602 9.370000e-16 95.3
51 TraesCS7A01G222300 chr5B 95.652 161 7 0 1729 1889 659769015 659769175 3.140000e-65 259.0
52 TraesCS7A01G222300 chr1A 94.118 170 10 0 777 946 571650642 571650473 3.140000e-65 259.0
53 TraesCS7A01G222300 chr1A 85.714 224 30 2 1900 2122 539324010 539324232 5.290000e-58 235.0
54 TraesCS7A01G222300 chr1A 76.106 226 50 4 2705 2927 113472106 113471882 7.190000e-22 115.0
55 TraesCS7A01G222300 chr2A 96.178 157 6 0 1733 1889 697044006 697043850 1.130000e-64 257.0
56 TraesCS7A01G222300 chr5A 91.351 185 16 0 762 946 647359840 647359656 1.460000e-63 254.0
57 TraesCS7A01G222300 chr2D 90.860 186 17 0 761 946 565521434 565521249 1.890000e-62 250.0
58 TraesCS7A01G222300 chr6D 90.811 185 17 0 762 946 285810077 285809893 6.800000e-62 248.0
59 TraesCS7A01G222300 chr3D 90.761 184 16 1 763 946 15411429 15411611 8.790000e-61 244.0
60 TraesCS7A01G222300 chr1B 85.714 224 30 2 1900 2122 596247779 596247557 5.290000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G222300 chr7A 191692729 191695901 3172 False 2003.333333 5860 98.449333 1 3173 3 chr7A.!!$F3 3172
1 TraesCS7A01G222300 chr7A 151863043 151863561 518 False 414.000000 414 82.274000 1241 1722 1 chr7A.!!$F1 481
2 TraesCS7A01G222300 chr7A 191663983 191665055 1072 True 407.833333 804 89.515000 1057 2295 3 chr7A.!!$R1 1238
3 TraesCS7A01G222300 chr7B 154160893 154161834 941 True 575.500000 800 89.776500 1057 2140 2 chr7B.!!$R4 1083
4 TraesCS7A01G222300 chr7B 113802026 113802537 511 True 431.000000 431 83.008000 1250 1725 1 chr7B.!!$R2 475
5 TraesCS7A01G222300 chr7B 113539021 113539546 525 True 427.000000 427 82.510000 1241 1729 1 chr7B.!!$R1 488
6 TraesCS7A01G222300 chr7B 154353274 154354352 1078 False 333.325000 1048 93.330250 2182 3172 4 chr7B.!!$F2 990
7 TraesCS7A01G222300 chr7B 154175345 154181531 6186 False 298.240000 595 88.443200 92 3067 5 chr7B.!!$F1 2975
8 TraesCS7A01G222300 chr7D 184573489 184574503 1014 True 592.500000 817 88.000000 1057 2203 2 chr7D.!!$R4 1146
9 TraesCS7A01G222300 chr7D 151825130 151825648 518 False 387.000000 387 81.310000 1241 1722 1 chr7D.!!$F1 481
10 TraesCS7A01G222300 chr7D 152087269 152088018 749 False 309.000000 385 84.745500 1250 2122 2 chr7D.!!$F2 872
11 TraesCS7A01G222300 chr7D 184579013 184585884 6871 False 308.800000 529 86.460600 249 3067 5 chr7D.!!$F3 2818
12 TraesCS7A01G222300 chr1D 439414254 439414977 723 True 335.500000 436 84.540500 1255 2122 2 chr1D.!!$R1 867
13 TraesCS7A01G222300 chrUn 85701209 85701887 678 False 427.000000 427 79.237000 1057 1722 1 chrUn.!!$F2 665
14 TraesCS7A01G222300 chrUn 85624759 85625268 509 False 370.000000 370 80.980000 1250 1722 1 chrUn.!!$F1 472
15 TraesCS7A01G222300 chrUn 185555018 185555530 512 True 370.000000 370 80.897000 1250 1725 1 chrUn.!!$R1 475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 373 0.108396 CATGGTATCATCCACCGCCA 59.892 55.0 0.00 0.0 40.51 5.69 F
1238 3542 0.108520 ACTAATGGTGTGCGTACGGG 60.109 55.0 18.39 0.0 0.00 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1891 4264 0.035317 TCCGACAGCATGCTCTTGTT 59.965 50.0 19.68 0.00 42.53 2.83 R
2668 7490 0.026803 GCACTTGTAGCGCTATGTGC 59.973 55.0 34.42 34.42 42.69 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.595466 GCTACCTAGCGACTCTGCTA 58.405 55.000 0.00 0.00 45.14 3.49
38 39 4.927978 AGCGACTCTGCTAGAAATATGT 57.072 40.909 0.00 0.00 45.14 2.29
40 41 6.582677 AGCGACTCTGCTAGAAATATGTAT 57.417 37.500 0.00 0.00 45.14 2.29
41 42 6.987386 AGCGACTCTGCTAGAAATATGTATT 58.013 36.000 0.00 0.00 45.14 1.89
42 43 6.865726 AGCGACTCTGCTAGAAATATGTATTG 59.134 38.462 0.00 0.00 45.14 1.90
43 44 6.090088 GCGACTCTGCTAGAAATATGTATTGG 59.910 42.308 0.00 0.00 0.00 3.16
44 45 6.090088 CGACTCTGCTAGAAATATGTATTGGC 59.910 42.308 0.00 0.00 0.00 4.52
45 46 5.928839 ACTCTGCTAGAAATATGTATTGGCG 59.071 40.000 0.00 0.00 0.00 5.69
46 47 5.853936 TCTGCTAGAAATATGTATTGGCGT 58.146 37.500 0.00 0.00 0.00 5.68
47 48 5.926542 TCTGCTAGAAATATGTATTGGCGTC 59.073 40.000 0.00 0.00 0.00 5.19
48 49 4.994852 TGCTAGAAATATGTATTGGCGTCC 59.005 41.667 0.00 0.00 0.00 4.79
49 50 4.994852 GCTAGAAATATGTATTGGCGTCCA 59.005 41.667 0.00 0.00 0.00 4.02
68 69 4.184649 CCAAGGAATGGTTATTAGGCCT 57.815 45.455 11.78 11.78 44.85 5.19
69 70 4.546674 CCAAGGAATGGTTATTAGGCCTT 58.453 43.478 12.58 0.00 44.85 4.35
70 71 4.342092 CCAAGGAATGGTTATTAGGCCTTG 59.658 45.833 12.58 0.00 44.85 3.61
71 72 4.881157 AGGAATGGTTATTAGGCCTTGT 57.119 40.909 12.58 1.94 0.00 3.16
72 73 5.987019 AGGAATGGTTATTAGGCCTTGTA 57.013 39.130 12.58 0.73 0.00 2.41
73 74 5.691896 AGGAATGGTTATTAGGCCTTGTAC 58.308 41.667 12.58 4.38 0.00 2.90
74 75 5.192923 AGGAATGGTTATTAGGCCTTGTACA 59.807 40.000 12.58 3.54 0.00 2.90
75 76 5.889289 GGAATGGTTATTAGGCCTTGTACAA 59.111 40.000 12.58 8.28 0.00 2.41
76 77 6.549736 GGAATGGTTATTAGGCCTTGTACAAT 59.450 38.462 12.58 6.77 0.00 2.71
77 78 6.959639 ATGGTTATTAGGCCTTGTACAATG 57.040 37.500 12.58 7.68 0.00 2.82
78 79 4.642885 TGGTTATTAGGCCTTGTACAATGC 59.357 41.667 23.06 23.06 0.00 3.56
79 80 4.642885 GGTTATTAGGCCTTGTACAATGCA 59.357 41.667 29.20 14.99 34.30 3.96
80 81 5.126384 GGTTATTAGGCCTTGTACAATGCAA 59.874 40.000 29.20 19.53 34.30 4.08
81 82 4.989279 ATTAGGCCTTGTACAATGCAAG 57.011 40.909 29.20 10.69 42.00 4.01
89 90 5.046910 CTTGTACAATGCAAGGTGGTTAG 57.953 43.478 9.13 0.00 39.53 2.34
90 91 4.093472 TGTACAATGCAAGGTGGTTAGT 57.907 40.909 0.00 0.00 0.00 2.24
91 92 5.230323 TGTACAATGCAAGGTGGTTAGTA 57.770 39.130 0.00 0.00 0.00 1.82
92 93 5.242434 TGTACAATGCAAGGTGGTTAGTAG 58.758 41.667 0.00 0.00 0.00 2.57
93 94 4.634012 ACAATGCAAGGTGGTTAGTAGA 57.366 40.909 0.00 0.00 0.00 2.59
94 95 4.579869 ACAATGCAAGGTGGTTAGTAGAG 58.420 43.478 0.00 0.00 0.00 2.43
95 96 3.914426 ATGCAAGGTGGTTAGTAGAGG 57.086 47.619 0.00 0.00 0.00 3.69
96 97 2.616524 TGCAAGGTGGTTAGTAGAGGT 58.383 47.619 0.00 0.00 0.00 3.85
97 98 2.301870 TGCAAGGTGGTTAGTAGAGGTG 59.698 50.000 0.00 0.00 0.00 4.00
98 99 2.935676 GCAAGGTGGTTAGTAGAGGTGC 60.936 54.545 0.00 0.00 0.00 5.01
102 103 3.768215 AGGTGGTTAGTAGAGGTGCTTAC 59.232 47.826 0.00 0.00 0.00 2.34
104 105 4.020839 GGTGGTTAGTAGAGGTGCTTACAA 60.021 45.833 0.00 0.00 0.00 2.41
114 115 9.515226 AGTAGAGGTGCTTACAAAAATAAATCA 57.485 29.630 0.00 0.00 0.00 2.57
142 143 6.903883 TTTCTTAAGCATCCGTGTCTATTC 57.096 37.500 0.00 0.00 0.00 1.75
143 144 4.607955 TCTTAAGCATCCGTGTCTATTCG 58.392 43.478 0.00 0.00 0.00 3.34
144 145 2.961526 AAGCATCCGTGTCTATTCGT 57.038 45.000 0.00 0.00 0.00 3.85
145 146 2.209838 AGCATCCGTGTCTATTCGTG 57.790 50.000 0.00 0.00 0.00 4.35
146 147 1.749063 AGCATCCGTGTCTATTCGTGA 59.251 47.619 0.00 0.00 0.00 4.35
147 148 2.165641 AGCATCCGTGTCTATTCGTGAA 59.834 45.455 0.00 0.00 0.00 3.18
148 149 3.123804 GCATCCGTGTCTATTCGTGAAT 58.876 45.455 0.22 0.22 34.93 2.57
149 150 3.060272 GCATCCGTGTCTATTCGTGAATG 60.060 47.826 5.37 0.00 32.50 2.67
155 156 5.628193 CCGTGTCTATTCGTGAATGGTATAC 59.372 44.000 5.37 0.00 32.07 1.47
161 162 7.592533 GTCTATTCGTGAATGGTATACGCTTAA 59.407 37.037 5.37 0.00 37.70 1.85
167 168 8.301720 TCGTGAATGGTATACGCTTAATTAGAT 58.698 33.333 0.00 0.00 37.70 1.98
172 173 8.605325 ATGGTATACGCTTAATTAGATACCCT 57.395 34.615 13.99 7.03 38.59 4.34
173 174 7.833786 TGGTATACGCTTAATTAGATACCCTG 58.166 38.462 13.99 0.00 38.59 4.45
182 183 8.759782 GCTTAATTAGATACCCTGCCTATAGAA 58.240 37.037 0.00 0.00 0.00 2.10
191 192 5.810095 ACCCTGCCTATAGAAATAAGCATC 58.190 41.667 0.00 0.00 35.10 3.91
192 193 5.189180 CCCTGCCTATAGAAATAAGCATCC 58.811 45.833 0.00 0.00 35.10 3.51
193 194 5.280676 CCCTGCCTATAGAAATAAGCATCCA 60.281 44.000 0.00 0.00 35.10 3.41
239 242 5.497474 TCCTAACAATCCTTTAAGCACCTC 58.503 41.667 0.00 0.00 0.00 3.85
254 257 0.676782 ACCTCGCATTGTACAAGCCC 60.677 55.000 14.65 3.92 0.00 5.19
269 272 0.250597 AGCCCTTGTACGTTTGTCCC 60.251 55.000 0.00 0.00 0.00 4.46
275 278 0.598158 TGTACGTTTGTCCCGACTGC 60.598 55.000 0.00 0.00 0.00 4.40
277 280 4.072088 CGTTTGTCCCGACTGCGC 62.072 66.667 0.00 0.00 35.83 6.09
279 282 3.936203 TTTGTCCCGACTGCGCCT 61.936 61.111 4.18 0.00 35.83 5.52
307 310 4.730949 AGGATGAGCAATGAAATGTTGG 57.269 40.909 0.00 0.00 0.00 3.77
327 330 7.950512 TGTTGGCTCAAGATTCAAGATTTTAA 58.049 30.769 0.00 0.00 0.00 1.52
370 373 0.108396 CATGGTATCATCCACCGCCA 59.892 55.000 0.00 0.00 40.51 5.69
382 385 1.681780 CCACCGCCATCCAAGTACAAT 60.682 52.381 0.00 0.00 0.00 2.71
387 390 3.692101 CCGCCATCCAAGTACAATGTTTA 59.308 43.478 0.00 0.00 0.00 2.01
409 412 4.270008 AGCTAAAACCCATTCTTGCGTAT 58.730 39.130 0.00 0.00 0.00 3.06
462 469 2.128035 GTGCTCGGACTATGCATGTAC 58.872 52.381 10.16 5.46 39.00 2.90
467 474 1.337071 CGGACTATGCATGTACCGACT 59.663 52.381 25.04 0.00 42.40 4.18
486 493 1.817099 CGCTCATGAACTGGCCTCC 60.817 63.158 3.32 0.00 0.00 4.30
530 537 4.114997 CTCGCGCCGCCCATTTTT 62.115 61.111 2.28 0.00 0.00 1.94
531 538 4.109693 TCGCGCCGCCCATTTTTC 62.110 61.111 2.28 0.00 0.00 2.29
532 539 4.114997 CGCGCCGCCCATTTTTCT 62.115 61.111 2.28 0.00 0.00 2.52
534 541 2.489751 CGCCGCCCATTTTTCTCC 59.510 61.111 0.00 0.00 0.00 3.71
535 542 2.892640 GCCGCCCATTTTTCTCCC 59.107 61.111 0.00 0.00 0.00 4.30
542 549 2.163613 GCCCATTTTTCTCCCGTTGTAG 59.836 50.000 0.00 0.00 0.00 2.74
581 588 8.620416 GGTTCATATATGTCTGTGCATTTGTTA 58.380 33.333 12.42 0.00 0.00 2.41
608 615 2.482142 GGCGGTTGTATCAGAGAGGAAG 60.482 54.545 0.00 0.00 0.00 3.46
637 661 0.385974 GCATGTGTCGCACCAAAGTC 60.386 55.000 7.38 0.00 32.73 3.01
644 668 2.248487 GTCGCACCAAAGTCTACGTAG 58.752 52.381 16.73 16.73 0.00 3.51
663 687 6.390721 ACGTAGCTGGCACATCTATAAATAG 58.609 40.000 0.00 0.00 39.34 1.73
665 689 6.749578 CGTAGCTGGCACATCTATAAATAGAG 59.250 42.308 0.00 1.82 39.34 2.43
688 712 3.610911 GAACTCCGAGAACATTCCCATT 58.389 45.455 1.33 0.00 0.00 3.16
695 719 3.505680 CGAGAACATTCCCATTCAACCAA 59.494 43.478 0.00 0.00 0.00 3.67
696 720 4.158394 CGAGAACATTCCCATTCAACCAAT 59.842 41.667 0.00 0.00 0.00 3.16
707 731 4.035558 CCATTCAACCAATCCTACATCACG 59.964 45.833 0.00 0.00 0.00 4.35
708 732 3.973206 TCAACCAATCCTACATCACGT 57.027 42.857 0.00 0.00 0.00 4.49
712 736 4.402056 ACCAATCCTACATCACGTAAGG 57.598 45.455 0.00 0.00 46.39 2.69
725 755 5.013568 TCACGTAAGGAAGAACAAGAACA 57.986 39.130 0.00 0.00 46.39 3.18
727 757 5.522460 TCACGTAAGGAAGAACAAGAACAAG 59.478 40.000 0.00 0.00 46.39 3.16
737 767 3.885484 ACAAGAACAAGCAGACAATCG 57.115 42.857 0.00 0.00 0.00 3.34
740 770 0.790207 GAACAAGCAGACAATCGCGA 59.210 50.000 13.09 13.09 0.00 5.87
741 771 1.194547 GAACAAGCAGACAATCGCGAA 59.805 47.619 15.24 0.00 0.00 4.70
742 772 0.512952 ACAAGCAGACAATCGCGAAC 59.487 50.000 15.24 5.33 0.00 3.95
744 774 0.602638 AAGCAGACAATCGCGAACCA 60.603 50.000 15.24 0.00 0.00 3.67
745 775 0.602638 AGCAGACAATCGCGAACCAA 60.603 50.000 15.24 0.00 0.00 3.67
746 776 0.452784 GCAGACAATCGCGAACCAAC 60.453 55.000 15.24 4.15 0.00 3.77
747 777 0.165944 CAGACAATCGCGAACCAACC 59.834 55.000 15.24 0.26 0.00 3.77
748 778 0.250124 AGACAATCGCGAACCAACCA 60.250 50.000 15.24 0.00 0.00 3.67
749 779 0.110373 GACAATCGCGAACCAACCAC 60.110 55.000 15.24 0.00 0.00 4.16
751 781 0.110238 CAATCGCGAACCAACCACAG 60.110 55.000 15.24 0.00 0.00 3.66
753 783 2.391724 ATCGCGAACCAACCACAGGT 62.392 55.000 15.24 0.00 42.34 4.00
761 791 2.582052 ACCAACCACAGGTTACACATG 58.418 47.619 0.40 0.00 45.01 3.21
764 794 3.243367 CCAACCACAGGTTACACATGTTG 60.243 47.826 0.00 0.00 45.01 3.33
767 797 3.181434 ACCACAGGTTACACATGTTGGAT 60.181 43.478 14.35 0.00 40.55 3.41
768 798 3.191162 CCACAGGTTACACATGTTGGATG 59.809 47.826 0.00 0.00 40.55 3.51
769 799 3.191162 CACAGGTTACACATGTTGGATGG 59.809 47.826 0.00 0.00 40.55 3.51
772 802 5.007034 CAGGTTACACATGTTGGATGGTTA 58.993 41.667 0.00 0.00 0.00 2.85
773 803 5.475220 CAGGTTACACATGTTGGATGGTTAA 59.525 40.000 0.00 0.00 0.00 2.01
774 804 6.015856 CAGGTTACACATGTTGGATGGTTAAA 60.016 38.462 0.00 0.00 0.00 1.52
775 805 6.208599 AGGTTACACATGTTGGATGGTTAAAG 59.791 38.462 0.00 0.00 0.00 1.85
776 806 6.386654 GTTACACATGTTGGATGGTTAAAGG 58.613 40.000 0.00 0.00 0.00 3.11
777 807 3.831911 ACACATGTTGGATGGTTAAAGGG 59.168 43.478 0.00 0.00 0.00 3.95
778 808 4.085733 CACATGTTGGATGGTTAAAGGGA 58.914 43.478 0.00 0.00 0.00 4.20
779 809 4.711355 CACATGTTGGATGGTTAAAGGGAT 59.289 41.667 0.00 0.00 0.00 3.85
780 810 5.890985 CACATGTTGGATGGTTAAAGGGATA 59.109 40.000 0.00 0.00 0.00 2.59
783 813 5.505780 TGTTGGATGGTTAAAGGGATAGTG 58.494 41.667 0.00 0.00 0.00 2.74
785 815 4.116113 TGGATGGTTAAAGGGATAGTGGT 58.884 43.478 0.00 0.00 0.00 4.16
786 816 5.290335 TGGATGGTTAAAGGGATAGTGGTA 58.710 41.667 0.00 0.00 0.00 3.25
787 817 5.914716 TGGATGGTTAAAGGGATAGTGGTAT 59.085 40.000 0.00 0.00 0.00 2.73
801 831 2.695666 AGTGGTATCCTCGGTTCATCAG 59.304 50.000 0.00 0.00 0.00 2.90
802 832 2.039418 TGGTATCCTCGGTTCATCAGG 58.961 52.381 0.00 0.00 0.00 3.86
803 833 1.344763 GGTATCCTCGGTTCATCAGGG 59.655 57.143 0.00 0.00 0.00 4.45
805 835 1.584724 ATCCTCGGTTCATCAGGGTT 58.415 50.000 0.00 0.00 0.00 4.11
806 836 0.902531 TCCTCGGTTCATCAGGGTTC 59.097 55.000 0.00 0.00 0.00 3.62
807 837 0.613260 CCTCGGTTCATCAGGGTTCA 59.387 55.000 0.00 0.00 0.00 3.18
808 838 1.003118 CCTCGGTTCATCAGGGTTCAA 59.997 52.381 0.00 0.00 0.00 2.69
809 839 2.350522 CTCGGTTCATCAGGGTTCAAG 58.649 52.381 0.00 0.00 0.00 3.02
810 840 1.697432 TCGGTTCATCAGGGTTCAAGT 59.303 47.619 0.00 0.00 0.00 3.16
811 841 2.105821 TCGGTTCATCAGGGTTCAAGTT 59.894 45.455 0.00 0.00 0.00 2.66
814 844 4.620982 GGTTCATCAGGGTTCAAGTTTTG 58.379 43.478 0.00 0.00 0.00 2.44
815 845 4.501400 GGTTCATCAGGGTTCAAGTTTTGG 60.501 45.833 0.00 0.00 0.00 3.28
817 847 3.636300 TCATCAGGGTTCAAGTTTTGGTG 59.364 43.478 0.00 0.00 0.00 4.17
818 848 1.754226 TCAGGGTTCAAGTTTTGGTGC 59.246 47.619 0.00 0.00 0.00 5.01
820 850 2.031870 AGGGTTCAAGTTTTGGTGCTC 58.968 47.619 0.00 0.00 0.00 4.26
821 851 1.269051 GGGTTCAAGTTTTGGTGCTCG 60.269 52.381 0.00 0.00 0.00 5.03
823 1007 1.098869 TTCAAGTTTTGGTGCTCGCA 58.901 45.000 0.00 0.00 0.00 5.10
826 1010 2.881513 TCAAGTTTTGGTGCTCGCATTA 59.118 40.909 0.00 0.00 0.00 1.90
834 1018 3.867857 TGGTGCTCGCATTATTTCTGTA 58.132 40.909 0.00 0.00 0.00 2.74
837 1021 5.007626 TGGTGCTCGCATTATTTCTGTATTC 59.992 40.000 0.00 0.00 0.00 1.75
838 1022 5.007626 GGTGCTCGCATTATTTCTGTATTCA 59.992 40.000 0.00 0.00 0.00 2.57
839 1023 6.293626 GGTGCTCGCATTATTTCTGTATTCAT 60.294 38.462 0.00 0.00 0.00 2.57
843 1027 7.857389 GCTCGCATTATTTCTGTATTCATTTCA 59.143 33.333 0.00 0.00 0.00 2.69
845 1029 8.344831 TCGCATTATTTCTGTATTCATTTCAGG 58.655 33.333 0.00 0.00 0.00 3.86
846 1030 8.344831 CGCATTATTTCTGTATTCATTTCAGGA 58.655 33.333 0.00 0.00 0.00 3.86
853 1037 9.709495 TTTCTGTATTCATTTCAGGATTTTTGG 57.291 29.630 0.00 0.00 0.00 3.28
854 1038 7.322664 TCTGTATTCATTTCAGGATTTTTGGC 58.677 34.615 0.00 0.00 0.00 4.52
855 1039 6.098679 TGTATTCATTTCAGGATTTTTGGCG 58.901 36.000 0.00 0.00 0.00 5.69
856 1040 4.862902 TTCATTTCAGGATTTTTGGCGA 57.137 36.364 0.00 0.00 0.00 5.54
858 1042 4.746729 TCATTTCAGGATTTTTGGCGATG 58.253 39.130 0.00 0.00 0.00 3.84
859 1043 2.652941 TTCAGGATTTTTGGCGATGC 57.347 45.000 0.00 0.00 0.00 3.91
871 1055 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
873 1057 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
875 1059 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
876 1060 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
877 1061 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
879 1063 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
880 1064 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
882 1066 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
908 1092 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
910 1094 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
913 1097 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
914 1098 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
916 1100 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
917 1101 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
919 1103 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
920 1104 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
922 1106 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
923 1107 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
924 1108 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
925 1109 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
927 1352 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
946 1462 0.390492 TGATATGCCGGCTCAGTCTG 59.610 55.000 29.70 0.00 0.00 3.51
964 1480 7.534085 CAGTCTGTACTGTGTTAAAAAGACA 57.466 36.000 0.00 0.00 46.76 3.41
975 3172 7.771183 TGTGTTAAAAAGACAGAAGCTTCATT 58.229 30.769 27.57 14.02 30.44 2.57
977 3174 9.730420 GTGTTAAAAAGACAGAAGCTTCATTTA 57.270 29.630 27.57 17.23 0.00 1.40
978 3175 9.730420 TGTTAAAAAGACAGAAGCTTCATTTAC 57.270 29.630 27.57 15.93 0.00 2.01
1003 3200 2.223829 CGTAGCTAGTCAAGGTCCATGG 60.224 54.545 4.97 4.97 37.13 3.66
1004 3201 0.543749 AGCTAGTCAAGGTCCATGGC 59.456 55.000 6.96 1.78 0.00 4.40
1005 3202 0.811616 GCTAGTCAAGGTCCATGGCG 60.812 60.000 6.96 0.00 0.00 5.69
1009 3206 3.197790 CAAGGTCCATGGCGAGCG 61.198 66.667 6.96 0.00 35.40 5.03
1010 3207 4.473520 AAGGTCCATGGCGAGCGG 62.474 66.667 6.96 0.00 35.40 5.52
1015 3212 4.473520 CCATGGCGAGCGGGTCTT 62.474 66.667 0.00 0.00 0.00 3.01
1017 3214 2.125106 ATGGCGAGCGGGTCTTTC 60.125 61.111 5.58 0.00 0.00 2.62
1018 3215 3.682292 ATGGCGAGCGGGTCTTTCC 62.682 63.158 5.58 4.63 0.00 3.13
1019 3216 4.083862 GGCGAGCGGGTCTTTCCT 62.084 66.667 5.58 0.00 36.25 3.36
1020 3217 2.815647 GCGAGCGGGTCTTTCCTG 60.816 66.667 5.58 0.00 45.06 3.86
1025 3222 2.269241 CGGGTCTTTCCTGCTCCC 59.731 66.667 0.00 0.00 35.61 4.30
1027 3224 1.604915 GGGTCTTTCCTGCTCCCTC 59.395 63.158 0.00 0.00 35.63 4.30
1028 3225 1.604915 GGTCTTTCCTGCTCCCTCC 59.395 63.158 0.00 0.00 0.00 4.30
1029 3226 1.219393 GTCTTTCCTGCTCCCTCCG 59.781 63.158 0.00 0.00 0.00 4.63
1032 3229 2.245438 CTTTCCTGCTCCCTCCGTCC 62.245 65.000 0.00 0.00 0.00 4.79
1033 3230 4.779733 TCCTGCTCCCTCCGTCCC 62.780 72.222 0.00 0.00 0.00 4.46
1034 3231 4.787280 CCTGCTCCCTCCGTCCCT 62.787 72.222 0.00 0.00 0.00 4.20
1035 3232 2.279073 CTGCTCCCTCCGTCCCTA 59.721 66.667 0.00 0.00 0.00 3.53
1036 3233 2.043248 TGCTCCCTCCGTCCCTAC 60.043 66.667 0.00 0.00 0.00 3.18
1037 3234 2.279408 GCTCCCTCCGTCCCTACT 59.721 66.667 0.00 0.00 0.00 2.57
1038 3235 2.128507 GCTCCCTCCGTCCCTACTG 61.129 68.421 0.00 0.00 0.00 2.74
1039 3236 1.455959 CTCCCTCCGTCCCTACTGG 60.456 68.421 0.00 0.00 0.00 4.00
1040 3237 2.226149 CTCCCTCCGTCCCTACTGGT 62.226 65.000 0.00 0.00 34.77 4.00
1041 3238 1.305887 CCCTCCGTCCCTACTGGTT 60.306 63.158 0.00 0.00 34.77 3.67
1042 3239 1.328430 CCCTCCGTCCCTACTGGTTC 61.328 65.000 0.00 0.00 34.77 3.62
1043 3240 0.324460 CCTCCGTCCCTACTGGTTCT 60.324 60.000 0.00 0.00 34.77 3.01
1044 3241 1.104630 CTCCGTCCCTACTGGTTCTC 58.895 60.000 0.00 0.00 34.77 2.87
1046 3243 1.139095 CGTCCCTACTGGTTCTCGC 59.861 63.158 0.00 0.00 34.77 5.03
1047 3244 1.592400 CGTCCCTACTGGTTCTCGCA 61.592 60.000 0.00 0.00 34.77 5.10
1048 3245 0.173708 GTCCCTACTGGTTCTCGCAG 59.826 60.000 0.00 0.00 34.77 5.18
1049 3246 1.153549 CCCTACTGGTTCTCGCAGC 60.154 63.158 0.00 0.00 0.00 5.25
1050 3247 1.608717 CCCTACTGGTTCTCGCAGCT 61.609 60.000 0.00 0.00 0.00 4.24
1053 3250 0.456221 TACTGGTTCTCGCAGCTAGC 59.544 55.000 6.62 6.62 40.87 3.42
1054 3251 1.254284 ACTGGTTCTCGCAGCTAGCT 61.254 55.000 12.68 12.68 42.61 3.32
1134 3412 2.948979 TCATTTCCACGACTGCTTTGTT 59.051 40.909 0.00 0.00 0.00 2.83
1160 3438 1.637338 AGCACATCTCTCCACACTCA 58.363 50.000 0.00 0.00 0.00 3.41
1177 3465 5.876460 CACACTCAGTGTTCCATTGATCATA 59.124 40.000 8.05 0.00 45.08 2.15
1194 3498 5.651576 TGATCATAATGGCTTTGTGCACTTA 59.348 36.000 19.41 6.66 45.15 2.24
1205 3509 5.574891 TTTGTGCACTTACAGAAACATGT 57.425 34.783 19.41 0.00 37.19 3.21
1206 3510 5.574891 TTGTGCACTTACAGAAACATGTT 57.425 34.783 19.41 4.92 34.56 2.71
1207 3511 6.685527 TTGTGCACTTACAGAAACATGTTA 57.314 33.333 19.41 0.00 34.56 2.41
1215 3519 6.995686 ACTTACAGAAACATGTTACATGTCCA 59.004 34.615 28.04 9.66 34.56 4.02
1217 3521 9.161629 CTTACAGAAACATGTTACATGTCCATA 57.838 33.333 28.04 16.44 34.56 2.74
1227 3531 9.725019 CATGTTACATGTCCATATACTAATGGT 57.275 33.333 16.45 0.00 45.67 3.55
1228 3532 9.725019 ATGTTACATGTCCATATACTAATGGTG 57.275 33.333 0.00 0.00 45.67 4.17
1229 3533 8.710239 TGTTACATGTCCATATACTAATGGTGT 58.290 33.333 0.00 3.51 45.67 4.16
1230 3534 8.988934 GTTACATGTCCATATACTAATGGTGTG 58.011 37.037 0.00 3.92 45.67 3.82
1231 3535 5.997746 ACATGTCCATATACTAATGGTGTGC 59.002 40.000 0.00 0.00 45.67 4.57
1237 3541 2.565210 TACTAATGGTGTGCGTACGG 57.435 50.000 18.39 0.00 0.00 4.02
1238 3542 0.108520 ACTAATGGTGTGCGTACGGG 60.109 55.000 18.39 0.00 0.00 5.28
1340 3671 1.004560 CCAACAAGAGCCTGCGAGA 60.005 57.895 0.00 0.00 0.00 4.04
1370 3701 4.785453 GGAGCGGGTGAAGGCCAG 62.785 72.222 5.01 0.00 0.00 4.85
1542 3897 0.635009 TCCCTCTACTCACCCGGATT 59.365 55.000 0.73 0.00 0.00 3.01
1548 3903 0.609151 TACTCACCCGGATTTTCGCA 59.391 50.000 0.73 0.00 0.00 5.10
1652 4007 1.669440 GGCTCTACAACACCACCGA 59.331 57.895 0.00 0.00 0.00 4.69
1732 4105 0.111089 CAAGAGCGTCGACAACAAGC 60.111 55.000 17.16 10.31 0.00 4.01
1733 4106 0.529773 AAGAGCGTCGACAACAAGCA 60.530 50.000 17.16 0.00 0.00 3.91
1734 4107 0.941463 AGAGCGTCGACAACAAGCAG 60.941 55.000 17.16 0.00 0.00 4.24
1735 4108 1.891060 GAGCGTCGACAACAAGCAGG 61.891 60.000 17.16 0.00 0.00 4.85
1736 4109 2.954753 GCGTCGACAACAAGCAGGG 61.955 63.158 17.16 0.00 0.00 4.45
1737 4110 2.317609 CGTCGACAACAAGCAGGGG 61.318 63.158 17.16 0.00 0.00 4.79
1738 4111 2.281484 TCGACAACAAGCAGGGGC 60.281 61.111 0.00 0.00 41.61 5.80
1758 4131 2.555199 CGTAGCTACGTACACCTACCT 58.445 52.381 32.96 0.00 44.13 3.08
1759 4132 2.286294 CGTAGCTACGTACACCTACCTG 59.714 54.545 32.96 5.26 44.13 4.00
1760 4133 1.760192 AGCTACGTACACCTACCTGG 58.240 55.000 0.00 0.00 42.93 4.45
1770 4143 1.296715 CCTACCTGGTGTCACTGGC 59.703 63.158 10.23 0.00 33.19 4.85
1771 4144 1.480212 CCTACCTGGTGTCACTGGCA 61.480 60.000 10.23 0.00 33.19 4.92
1772 4145 0.320771 CTACCTGGTGTCACTGGCAC 60.321 60.000 10.23 5.11 36.22 5.01
1777 4150 4.250305 GTGTCACTGGCACCGGGT 62.250 66.667 6.32 0.00 0.00 5.28
1778 4151 3.936203 TGTCACTGGCACCGGGTC 61.936 66.667 6.32 0.00 0.00 4.46
1779 4152 4.699522 GTCACTGGCACCGGGTCC 62.700 72.222 6.32 6.88 0.00 4.46
1781 4154 4.263572 CACTGGCACCGGGTCCAA 62.264 66.667 16.29 0.00 30.98 3.53
1782 4155 3.256960 ACTGGCACCGGGTCCAAT 61.257 61.111 16.29 5.48 30.98 3.16
1783 4156 2.438434 CTGGCACCGGGTCCAATC 60.438 66.667 16.29 0.00 30.98 2.67
1784 4157 2.933287 TGGCACCGGGTCCAATCT 60.933 61.111 13.71 0.00 0.00 2.40
1785 4158 1.613928 TGGCACCGGGTCCAATCTA 60.614 57.895 13.71 0.00 0.00 1.98
1786 4159 1.153229 GGCACCGGGTCCAATCTAC 60.153 63.158 6.32 0.00 0.00 2.59
1787 4160 1.600107 GCACCGGGTCCAATCTACA 59.400 57.895 6.32 0.00 0.00 2.74
1788 4161 0.743345 GCACCGGGTCCAATCTACAC 60.743 60.000 6.32 0.00 0.00 2.90
1789 4162 0.902531 CACCGGGTCCAATCTACACT 59.097 55.000 6.32 0.00 0.00 3.55
1790 4163 1.278127 CACCGGGTCCAATCTACACTT 59.722 52.381 6.32 0.00 0.00 3.16
1791 4164 1.278127 ACCGGGTCCAATCTACACTTG 59.722 52.381 6.32 0.00 0.00 3.16
1792 4165 1.369625 CGGGTCCAATCTACACTTGC 58.630 55.000 0.00 0.00 0.00 4.01
1793 4166 1.066143 CGGGTCCAATCTACACTTGCT 60.066 52.381 0.00 0.00 0.00 3.91
1794 4167 2.615493 CGGGTCCAATCTACACTTGCTT 60.615 50.000 0.00 0.00 0.00 3.91
1795 4168 3.369052 CGGGTCCAATCTACACTTGCTTA 60.369 47.826 0.00 0.00 0.00 3.09
1796 4169 4.585879 GGGTCCAATCTACACTTGCTTAA 58.414 43.478 0.00 0.00 0.00 1.85
1797 4170 4.636206 GGGTCCAATCTACACTTGCTTAAG 59.364 45.833 0.00 0.00 0.00 1.85
1798 4171 5.488341 GGTCCAATCTACACTTGCTTAAGA 58.512 41.667 6.67 0.00 0.00 2.10
1799 4172 6.116126 GGTCCAATCTACACTTGCTTAAGAT 58.884 40.000 6.67 0.00 0.00 2.40
1800 4173 7.272978 GGTCCAATCTACACTTGCTTAAGATA 58.727 38.462 6.67 0.00 0.00 1.98
1801 4174 7.769044 GGTCCAATCTACACTTGCTTAAGATAA 59.231 37.037 6.67 0.00 0.00 1.75
1802 4175 9.331282 GTCCAATCTACACTTGCTTAAGATAAT 57.669 33.333 6.67 0.00 0.00 1.28
1803 4176 9.547753 TCCAATCTACACTTGCTTAAGATAATC 57.452 33.333 6.67 0.00 0.00 1.75
1804 4177 8.778358 CCAATCTACACTTGCTTAAGATAATCC 58.222 37.037 6.67 0.00 0.00 3.01
1805 4178 9.330063 CAATCTACACTTGCTTAAGATAATCCA 57.670 33.333 6.67 0.00 0.00 3.41
1808 4181 9.330063 TCTACACTTGCTTAAGATAATCCATTG 57.670 33.333 6.67 0.00 0.00 2.82
1809 4182 9.330063 CTACACTTGCTTAAGATAATCCATTGA 57.670 33.333 6.67 0.00 0.00 2.57
1810 4183 8.757982 ACACTTGCTTAAGATAATCCATTGAT 57.242 30.769 6.67 0.00 0.00 2.57
1811 4184 9.193806 ACACTTGCTTAAGATAATCCATTGATT 57.806 29.630 6.67 0.00 43.56 2.57
1828 4201 9.559732 TCCATTGATTTAGTGTATAGGTCATTG 57.440 33.333 0.00 0.00 0.00 2.82
1829 4202 9.559732 CCATTGATTTAGTGTATAGGTCATTGA 57.440 33.333 0.00 0.00 0.00 2.57
1854 4227 5.666969 TTTTGATGTGTTCTTCTACGTGG 57.333 39.130 0.00 0.00 0.00 4.94
1855 4228 4.594123 TTGATGTGTTCTTCTACGTGGA 57.406 40.909 0.00 0.00 0.00 4.02
1856 4229 3.909430 TGATGTGTTCTTCTACGTGGAC 58.091 45.455 0.00 0.00 0.00 4.02
1857 4230 3.319689 TGATGTGTTCTTCTACGTGGACA 59.680 43.478 0.00 0.00 0.00 4.02
1858 4231 3.088194 TGTGTTCTTCTACGTGGACAC 57.912 47.619 12.72 12.72 0.00 3.67
1859 4232 2.223876 TGTGTTCTTCTACGTGGACACC 60.224 50.000 15.69 1.01 0.00 4.16
1860 4233 1.001048 TGTTCTTCTACGTGGACACCG 60.001 52.381 0.00 0.00 0.00 4.94
1861 4234 0.599558 TTCTTCTACGTGGACACCGG 59.400 55.000 0.00 0.00 0.00 5.28
1862 4235 1.214589 CTTCTACGTGGACACCGGG 59.785 63.158 6.32 0.00 0.00 5.73
1863 4236 1.530013 CTTCTACGTGGACACCGGGT 61.530 60.000 6.32 0.00 0.00 5.28
1864 4237 0.251121 TTCTACGTGGACACCGGGTA 60.251 55.000 6.32 0.00 0.00 3.69
1865 4238 0.251121 TCTACGTGGACACCGGGTAA 60.251 55.000 6.32 0.00 0.00 2.85
1866 4239 0.819582 CTACGTGGACACCGGGTAAT 59.180 55.000 6.32 0.00 0.00 1.89
1867 4240 0.817013 TACGTGGACACCGGGTAATC 59.183 55.000 6.32 0.13 0.00 1.75
1868 4241 0.901580 ACGTGGACACCGGGTAATCT 60.902 55.000 6.32 0.00 0.00 2.40
1869 4242 0.248289 CGTGGACACCGGGTAATCTT 59.752 55.000 6.32 0.00 0.00 2.40
1870 4243 1.738030 CGTGGACACCGGGTAATCTTC 60.738 57.143 6.32 0.00 0.00 2.87
1871 4244 1.276989 GTGGACACCGGGTAATCTTCA 59.723 52.381 6.32 0.00 0.00 3.02
1872 4245 1.553248 TGGACACCGGGTAATCTTCAG 59.447 52.381 6.32 0.00 0.00 3.02
1873 4246 1.553704 GGACACCGGGTAATCTTCAGT 59.446 52.381 6.32 0.00 0.00 3.41
1874 4247 2.418334 GGACACCGGGTAATCTTCAGTC 60.418 54.545 6.32 0.04 0.00 3.51
1875 4248 2.496470 GACACCGGGTAATCTTCAGTCT 59.504 50.000 6.32 0.00 0.00 3.24
1876 4249 2.233922 ACACCGGGTAATCTTCAGTCTG 59.766 50.000 6.32 0.00 0.00 3.51
1877 4250 1.831736 ACCGGGTAATCTTCAGTCTGG 59.168 52.381 6.32 0.00 0.00 3.86
1878 4251 1.139058 CCGGGTAATCTTCAGTCTGGG 59.861 57.143 0.00 0.00 0.00 4.45
1879 4252 1.831736 CGGGTAATCTTCAGTCTGGGT 59.168 52.381 0.00 0.00 0.00 4.51
1880 4253 2.236395 CGGGTAATCTTCAGTCTGGGTT 59.764 50.000 0.00 0.00 0.00 4.11
1881 4254 3.679083 CGGGTAATCTTCAGTCTGGGTTC 60.679 52.174 0.00 0.00 0.00 3.62
1882 4255 3.522553 GGTAATCTTCAGTCTGGGTTCG 58.477 50.000 0.00 0.00 0.00 3.95
1883 4256 2.100605 AATCTTCAGTCTGGGTTCGC 57.899 50.000 0.00 0.00 0.00 4.70
1884 4257 0.250513 ATCTTCAGTCTGGGTTCGCC 59.749 55.000 0.00 0.00 0.00 5.54
1894 4267 2.112297 GGTTCGCCCCTGACAACA 59.888 61.111 0.00 0.00 0.00 3.33
1895 4268 1.527380 GGTTCGCCCCTGACAACAA 60.527 57.895 0.00 0.00 0.00 2.83
1896 4269 1.515521 GGTTCGCCCCTGACAACAAG 61.516 60.000 0.00 0.00 0.00 3.16
1963 4336 1.676635 AGCTACTACCGCCACGTCA 60.677 57.895 0.00 0.00 0.00 4.35
1989 4362 4.406763 AGGGGGCTCTTCCGCTCT 62.407 66.667 0.00 0.00 45.42 4.09
1992 4365 2.439104 GGGGCTCTTCCGCTCTGAT 61.439 63.158 0.00 0.00 43.89 2.90
2026 4399 4.309950 ACGCCACCACCGAGGAAC 62.310 66.667 0.00 0.00 41.22 3.62
2046 4419 4.409218 GTCCGGTGCGTCGCTACA 62.409 66.667 19.50 0.00 0.00 2.74
2092 4465 1.303309 GGATTTCAGCGAGTCCATGG 58.697 55.000 4.97 4.97 0.00 3.66
2108 4481 1.315257 ATGGTCAAGATGGGCAACGC 61.315 55.000 0.00 0.00 37.60 4.84
2157 4544 5.944599 AGACATACGTCCTCAACTAGAGAAA 59.055 40.000 0.00 0.00 43.73 2.52
2177 4564 3.487120 ACTACCAGCGGATTAATTCCC 57.513 47.619 1.50 0.00 42.06 3.97
2212 4599 8.541133 TGTTTGTTGACAAGTGAATCGATATA 57.459 30.769 0.00 0.00 37.15 0.86
2367 4771 7.725142 ACGTTTTGTAAAGTTTGTGAACAATG 58.275 30.769 0.00 0.00 38.26 2.82
2459 4883 9.967346 TCGTGACATTATTTCCAATTTGTAAAA 57.033 25.926 0.00 0.00 0.00 1.52
2639 7461 6.391227 ACGACCAAAACAAAATCTCTGAAT 57.609 33.333 0.00 0.00 0.00 2.57
2668 7490 0.940991 GAAAAACCTGCCAGCGCAAG 60.941 55.000 11.47 0.00 46.66 4.01
2793 7893 7.970384 TCATTCAGTTCGGTTTTATATGTGTC 58.030 34.615 0.00 0.00 0.00 3.67
2862 7962 0.892063 ACCGTGTTGGCTTGTTGTTT 59.108 45.000 0.00 0.00 43.94 2.83
2915 8017 4.522789 AGAATTGTTCGGTGTTTGGCTATT 59.477 37.500 0.00 0.00 34.02 1.73
2928 8030 7.868415 GGTGTTTGGCTATTGTTTTATTACACA 59.132 33.333 0.00 0.00 34.32 3.72
2970 8072 4.070009 GGAAGGTAGAATTGTTCGGTGTT 58.930 43.478 0.00 0.00 34.02 3.32
2973 8075 4.457466 AGGTAGAATTGTTCGGTGTTTGT 58.543 39.130 0.00 0.00 34.02 2.83
2979 8094 5.236478 AGAATTGTTCGGTGTTTGTCTACAG 59.764 40.000 0.00 0.00 34.02 2.74
3077 8201 1.602377 GCGCCTATTTGACGCCTTAAT 59.398 47.619 0.00 0.00 46.63 1.40
3091 8228 1.883275 CCTTAATCACCCGTGCAAACA 59.117 47.619 0.00 0.00 0.00 2.83
3092 8229 2.351350 CCTTAATCACCCGTGCAAACAC 60.351 50.000 0.00 0.00 43.76 3.32
3100 8237 3.996073 GTGCAAACACAGTTGGCG 58.004 55.556 4.93 0.00 46.61 5.69
3102 8239 2.658268 GCAAACACAGTTGGCGCC 60.658 61.111 22.73 22.73 0.00 6.53
3161 8312 1.202651 ACGAGAGGGAACACACCAAAG 60.203 52.381 0.00 0.00 0.00 2.77
3172 8323 3.116091 CACCAAAGTGGAGCAGGTT 57.884 52.632 0.18 0.00 40.96 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.595466 TAGCAGAGTCGCTAGGTAGC 58.405 55.000 11.13 0.00 43.56 3.58
16 17 7.689446 ATACATATTTCTAGCAGAGTCGCTA 57.311 36.000 13.52 13.52 43.56 4.26
17 18 4.927978 ACATATTTCTAGCAGAGTCGCT 57.072 40.909 12.81 12.81 46.26 4.93
18 19 6.090088 CCAATACATATTTCTAGCAGAGTCGC 59.910 42.308 0.00 0.00 0.00 5.19
19 20 6.090088 GCCAATACATATTTCTAGCAGAGTCG 59.910 42.308 0.00 0.00 0.00 4.18
20 21 6.090088 CGCCAATACATATTTCTAGCAGAGTC 59.910 42.308 0.00 0.00 0.00 3.36
21 22 5.928839 CGCCAATACATATTTCTAGCAGAGT 59.071 40.000 0.00 0.00 0.00 3.24
22 23 5.928839 ACGCCAATACATATTTCTAGCAGAG 59.071 40.000 0.00 0.00 0.00 3.35
23 24 5.853936 ACGCCAATACATATTTCTAGCAGA 58.146 37.500 0.00 0.00 0.00 4.26
24 25 5.120830 GGACGCCAATACATATTTCTAGCAG 59.879 44.000 0.00 0.00 0.00 4.24
25 26 4.994852 GGACGCCAATACATATTTCTAGCA 59.005 41.667 0.00 0.00 0.00 3.49
26 27 4.994852 TGGACGCCAATACATATTTCTAGC 59.005 41.667 0.00 0.00 0.00 3.42
27 28 6.147821 CCTTGGACGCCAATACATATTTCTAG 59.852 42.308 10.99 0.00 43.07 2.43
28 29 5.995282 CCTTGGACGCCAATACATATTTCTA 59.005 40.000 10.99 0.00 43.07 2.10
29 30 4.821805 CCTTGGACGCCAATACATATTTCT 59.178 41.667 10.99 0.00 43.07 2.52
30 31 4.819630 TCCTTGGACGCCAATACATATTTC 59.180 41.667 10.99 0.00 43.07 2.17
31 32 4.787551 TCCTTGGACGCCAATACATATTT 58.212 39.130 10.99 0.00 43.07 1.40
32 33 4.431416 TCCTTGGACGCCAATACATATT 57.569 40.909 10.99 0.00 43.07 1.28
33 34 4.431416 TTCCTTGGACGCCAATACATAT 57.569 40.909 10.99 0.00 43.07 1.78
34 35 3.916359 TTCCTTGGACGCCAATACATA 57.084 42.857 10.99 0.00 43.07 2.29
35 36 2.799126 TTCCTTGGACGCCAATACAT 57.201 45.000 10.99 0.00 43.07 2.29
36 37 2.364632 CATTCCTTGGACGCCAATACA 58.635 47.619 10.99 0.65 43.07 2.29
48 49 4.956075 ACAAGGCCTAATAACCATTCCTTG 59.044 41.667 5.16 14.41 43.17 3.61
49 50 5.206905 ACAAGGCCTAATAACCATTCCTT 57.793 39.130 5.16 0.00 29.96 3.36
50 51 4.881157 ACAAGGCCTAATAACCATTCCT 57.119 40.909 5.16 0.00 0.00 3.36
51 52 5.442391 TGTACAAGGCCTAATAACCATTCC 58.558 41.667 5.16 0.00 0.00 3.01
52 53 7.425606 CATTGTACAAGGCCTAATAACCATTC 58.574 38.462 14.65 0.00 0.00 2.67
53 54 6.183360 GCATTGTACAAGGCCTAATAACCATT 60.183 38.462 29.85 0.00 41.71 3.16
54 55 5.301805 GCATTGTACAAGGCCTAATAACCAT 59.698 40.000 29.85 0.00 41.71 3.55
55 56 4.642885 GCATTGTACAAGGCCTAATAACCA 59.357 41.667 29.85 0.00 41.71 3.67
56 57 4.642885 TGCATTGTACAAGGCCTAATAACC 59.357 41.667 34.56 11.28 46.35 2.85
57 58 5.828299 TGCATTGTACAAGGCCTAATAAC 57.172 39.130 34.56 11.91 46.35 1.89
58 59 6.449635 CTTGCATTGTACAAGGCCTAATAA 57.550 37.500 34.56 23.08 46.35 1.40
60 61 4.989279 CTTGCATTGTACAAGGCCTAAT 57.011 40.909 34.56 6.30 46.35 1.73
67 68 4.518970 ACTAACCACCTTGCATTGTACAAG 59.481 41.667 14.65 7.46 43.36 3.16
68 69 4.465886 ACTAACCACCTTGCATTGTACAA 58.534 39.130 11.41 11.41 0.00 2.41
69 70 4.093472 ACTAACCACCTTGCATTGTACA 57.907 40.909 0.00 0.00 0.00 2.90
70 71 5.484715 TCTACTAACCACCTTGCATTGTAC 58.515 41.667 0.00 0.00 0.00 2.90
71 72 5.338056 CCTCTACTAACCACCTTGCATTGTA 60.338 44.000 0.00 0.00 0.00 2.41
72 73 4.565652 CCTCTACTAACCACCTTGCATTGT 60.566 45.833 0.00 0.00 0.00 2.71
73 74 3.941483 CCTCTACTAACCACCTTGCATTG 59.059 47.826 0.00 0.00 0.00 2.82
74 75 3.587506 ACCTCTACTAACCACCTTGCATT 59.412 43.478 0.00 0.00 0.00 3.56
75 76 3.055094 CACCTCTACTAACCACCTTGCAT 60.055 47.826 0.00 0.00 0.00 3.96
76 77 2.301870 CACCTCTACTAACCACCTTGCA 59.698 50.000 0.00 0.00 0.00 4.08
77 78 2.935676 GCACCTCTACTAACCACCTTGC 60.936 54.545 0.00 0.00 0.00 4.01
78 79 2.567615 AGCACCTCTACTAACCACCTTG 59.432 50.000 0.00 0.00 0.00 3.61
79 80 2.903926 AGCACCTCTACTAACCACCTT 58.096 47.619 0.00 0.00 0.00 3.50
80 81 2.625282 AGCACCTCTACTAACCACCT 57.375 50.000 0.00 0.00 0.00 4.00
81 82 3.512724 TGTAAGCACCTCTACTAACCACC 59.487 47.826 0.00 0.00 0.00 4.61
82 83 4.796038 TGTAAGCACCTCTACTAACCAC 57.204 45.455 0.00 0.00 0.00 4.16
83 84 5.811796 TTTGTAAGCACCTCTACTAACCA 57.188 39.130 0.00 0.00 0.00 3.67
84 85 7.683437 ATTTTTGTAAGCACCTCTACTAACC 57.317 36.000 0.00 0.00 0.00 2.85
88 89 9.515226 TGATTTATTTTTGTAAGCACCTCTACT 57.485 29.630 0.00 0.00 0.00 2.57
122 123 4.207224 CACGAATAGACACGGATGCTTAAG 59.793 45.833 0.00 0.00 0.00 1.85
123 124 4.109766 CACGAATAGACACGGATGCTTAA 58.890 43.478 0.00 0.00 0.00 1.85
124 125 3.379057 TCACGAATAGACACGGATGCTTA 59.621 43.478 0.00 0.00 0.00 3.09
125 126 2.165641 TCACGAATAGACACGGATGCTT 59.834 45.455 0.00 0.00 0.00 3.91
127 128 2.203800 TCACGAATAGACACGGATGC 57.796 50.000 0.00 0.00 0.00 3.91
129 130 3.132289 ACCATTCACGAATAGACACGGAT 59.868 43.478 0.00 0.00 0.00 4.18
130 131 2.494471 ACCATTCACGAATAGACACGGA 59.506 45.455 0.00 0.00 0.00 4.69
131 132 2.888594 ACCATTCACGAATAGACACGG 58.111 47.619 0.00 0.00 0.00 4.94
132 133 5.338822 CGTATACCATTCACGAATAGACACG 59.661 44.000 0.00 0.00 37.89 4.49
133 134 5.116680 GCGTATACCATTCACGAATAGACAC 59.883 44.000 0.00 0.00 37.89 3.67
134 135 5.009310 AGCGTATACCATTCACGAATAGACA 59.991 40.000 0.00 0.00 37.89 3.41
135 136 5.458891 AGCGTATACCATTCACGAATAGAC 58.541 41.667 0.00 0.00 37.89 2.59
136 137 5.700722 AGCGTATACCATTCACGAATAGA 57.299 39.130 0.00 0.00 37.89 1.98
137 138 7.862741 TTAAGCGTATACCATTCACGAATAG 57.137 36.000 0.00 0.00 37.89 1.73
139 140 7.724305 AATTAAGCGTATACCATTCACGAAT 57.276 32.000 0.00 0.00 37.89 3.34
140 141 8.136800 TCTAATTAAGCGTATACCATTCACGAA 58.863 33.333 0.00 0.00 37.89 3.85
142 143 7.862741 TCTAATTAAGCGTATACCATTCACG 57.137 36.000 0.00 0.00 38.66 4.35
144 145 9.865321 GGTATCTAATTAAGCGTATACCATTCA 57.135 33.333 11.91 0.00 39.00 2.57
145 146 9.310716 GGGTATCTAATTAAGCGTATACCATTC 57.689 37.037 15.93 2.80 40.29 2.67
146 147 9.043548 AGGGTATCTAATTAAGCGTATACCATT 57.956 33.333 15.93 0.00 40.29 3.16
147 148 8.475639 CAGGGTATCTAATTAAGCGTATACCAT 58.524 37.037 15.93 9.89 40.29 3.55
148 149 7.578189 GCAGGGTATCTAATTAAGCGTATACCA 60.578 40.741 15.93 0.00 40.29 3.25
149 150 6.755607 GCAGGGTATCTAATTAAGCGTATACC 59.244 42.308 0.00 0.00 38.62 2.73
155 156 4.273148 AGGCAGGGTATCTAATTAAGCG 57.727 45.455 0.00 0.00 0.00 4.68
192 193 9.824534 GGAAAATAAACCATGTTTTAAAGCATG 57.175 29.630 28.42 28.42 44.24 4.06
193 194 9.791801 AGGAAAATAAACCATGTTTTAAAGCAT 57.208 25.926 11.35 11.35 33.12 3.79
204 206 9.942850 AAAGGATTGTTAGGAAAATAAACCATG 57.057 29.630 0.00 0.00 0.00 3.66
217 219 4.332819 CGAGGTGCTTAAAGGATTGTTAGG 59.667 45.833 0.00 0.00 0.00 2.69
222 224 2.083774 TGCGAGGTGCTTAAAGGATTG 58.916 47.619 0.00 0.00 46.63 2.67
224 226 2.684881 CAATGCGAGGTGCTTAAAGGAT 59.315 45.455 0.00 0.00 46.63 3.24
225 227 2.083774 CAATGCGAGGTGCTTAAAGGA 58.916 47.619 0.00 0.00 46.63 3.36
233 236 0.179189 GCTTGTACAATGCGAGGTGC 60.179 55.000 9.13 2.55 46.70 5.01
239 242 3.700577 CAAGGGCTTGTACAATGCG 57.299 52.632 9.13 0.00 35.92 4.73
254 257 1.790623 CAGTCGGGACAAACGTACAAG 59.209 52.381 1.17 0.00 0.00 3.16
265 268 4.681978 AACAGGCGCAGTCGGGAC 62.682 66.667 10.83 0.00 36.95 4.46
266 269 4.680237 CAACAGGCGCAGTCGGGA 62.680 66.667 10.83 0.00 36.95 5.14
307 310 8.699283 AGCAATTAAAATCTTGAATCTTGAGC 57.301 30.769 0.00 0.00 0.00 4.26
352 355 1.003580 GATGGCGGTGGATGATACCAT 59.996 52.381 0.00 0.00 42.17 3.55
370 373 8.520351 GGTTTTAGCTAAACATTGTACTTGGAT 58.480 33.333 18.45 0.00 46.44 3.41
382 385 5.563867 CGCAAGAATGGGTTTTAGCTAAACA 60.564 40.000 18.45 13.50 43.98 2.83
409 412 9.421806 CACAATTATTGGCTTTTGTCTAAATCA 57.578 29.630 9.88 0.00 30.23 2.57
462 469 0.803768 CCAGTTCATGAGCGAGTCGG 60.804 60.000 15.52 0.00 0.00 4.79
467 474 1.219124 GAGGCCAGTTCATGAGCGA 59.781 57.895 5.01 0.00 0.00 4.93
513 520 4.114997 AAAAATGGGCGGCGCGAG 62.115 61.111 26.95 3.39 0.00 5.03
520 527 0.109319 CAACGGGAGAAAAATGGGCG 60.109 55.000 0.00 0.00 0.00 6.13
581 588 3.197766 TCTCTGATACAACCGCCTCAATT 59.802 43.478 0.00 0.00 0.00 2.32
637 661 3.924918 ATAGATGTGCCAGCTACGTAG 57.075 47.619 18.47 18.47 35.15 3.51
644 668 5.046304 TCCCTCTATTTATAGATGTGCCAGC 60.046 44.000 0.18 0.00 38.60 4.85
663 687 2.418884 GGAATGTTCTCGGAGTTCCCTC 60.419 54.545 11.99 3.34 33.80 4.30
665 689 2.025589 GGAATGTTCTCGGAGTTCCC 57.974 55.000 11.99 1.55 33.80 3.97
678 702 4.065214 AGGATTGGTTGAATGGGAATGT 57.935 40.909 0.00 0.00 0.00 2.71
679 703 4.955450 TGTAGGATTGGTTGAATGGGAATG 59.045 41.667 0.00 0.00 0.00 2.67
688 712 3.973206 ACGTGATGTAGGATTGGTTGA 57.027 42.857 0.00 0.00 0.00 3.18
695 719 5.421056 TGTTCTTCCTTACGTGATGTAGGAT 59.579 40.000 0.00 0.00 33.33 3.24
696 720 4.768448 TGTTCTTCCTTACGTGATGTAGGA 59.232 41.667 0.00 0.00 32.08 2.94
707 731 5.527582 TCTGCTTGTTCTTGTTCTTCCTTAC 59.472 40.000 0.00 0.00 0.00 2.34
708 732 5.527582 GTCTGCTTGTTCTTGTTCTTCCTTA 59.472 40.000 0.00 0.00 0.00 2.69
711 735 3.627577 TGTCTGCTTGTTCTTGTTCTTCC 59.372 43.478 0.00 0.00 0.00 3.46
712 736 4.882671 TGTCTGCTTGTTCTTGTTCTTC 57.117 40.909 0.00 0.00 0.00 2.87
725 755 0.602638 TGGTTCGCGATTGTCTGCTT 60.603 50.000 10.88 0.00 0.00 3.91
727 757 0.452784 GTTGGTTCGCGATTGTCTGC 60.453 55.000 10.88 0.00 0.00 4.26
737 767 0.589708 GTAACCTGTGGTTGGTTCGC 59.410 55.000 11.78 0.00 46.35 4.70
740 770 2.810870 TGTGTAACCTGTGGTTGGTT 57.189 45.000 11.78 3.60 46.35 3.67
741 771 2.092103 ACATGTGTAACCTGTGGTTGGT 60.092 45.455 11.78 0.00 44.15 3.67
742 772 2.582052 ACATGTGTAACCTGTGGTTGG 58.418 47.619 11.78 0.00 44.15 3.77
744 774 2.955660 CCAACATGTGTAACCTGTGGTT 59.044 45.455 0.00 7.18 45.09 3.67
745 775 2.173782 TCCAACATGTGTAACCTGTGGT 59.826 45.455 0.00 0.00 45.09 4.16
746 776 2.857483 TCCAACATGTGTAACCTGTGG 58.143 47.619 0.00 0.11 45.09 4.17
747 777 3.191162 CCATCCAACATGTGTAACCTGTG 59.809 47.826 0.00 0.00 45.09 3.66
749 779 3.420893 ACCATCCAACATGTGTAACCTG 58.579 45.455 0.00 0.00 38.51 4.00
751 781 5.968528 TTAACCATCCAACATGTGTAACC 57.031 39.130 0.00 0.00 34.36 2.85
753 783 5.478679 CCCTTTAACCATCCAACATGTGTAA 59.521 40.000 0.00 0.00 0.00 2.41
755 785 3.831911 CCCTTTAACCATCCAACATGTGT 59.168 43.478 0.00 0.00 0.00 3.72
758 788 6.039717 CACTATCCCTTTAACCATCCAACATG 59.960 42.308 0.00 0.00 0.00 3.21
759 789 6.129179 CACTATCCCTTTAACCATCCAACAT 58.871 40.000 0.00 0.00 0.00 2.71
761 791 4.887655 CCACTATCCCTTTAACCATCCAAC 59.112 45.833 0.00 0.00 0.00 3.77
764 794 4.790718 ACCACTATCCCTTTAACCATCC 57.209 45.455 0.00 0.00 0.00 3.51
767 797 5.899631 GGATACCACTATCCCTTTAACCA 57.100 43.478 0.00 0.00 42.06 3.67
776 806 3.228453 TGAACCGAGGATACCACTATCC 58.772 50.000 0.00 0.00 46.62 2.59
777 807 4.523173 TGATGAACCGAGGATACCACTATC 59.477 45.833 0.00 0.00 37.17 2.08
778 808 4.480115 TGATGAACCGAGGATACCACTAT 58.520 43.478 0.00 0.00 37.17 2.12
779 809 3.889538 CTGATGAACCGAGGATACCACTA 59.110 47.826 0.00 0.00 37.17 2.74
780 810 2.695666 CTGATGAACCGAGGATACCACT 59.304 50.000 0.00 0.00 37.17 4.00
783 813 1.344763 CCCTGATGAACCGAGGATACC 59.655 57.143 0.00 0.00 37.17 2.73
785 815 2.471815 ACCCTGATGAACCGAGGATA 57.528 50.000 0.00 0.00 0.00 2.59
786 816 1.486726 GAACCCTGATGAACCGAGGAT 59.513 52.381 0.00 0.00 0.00 3.24
787 817 0.902531 GAACCCTGATGAACCGAGGA 59.097 55.000 0.00 0.00 0.00 3.71
790 820 1.697432 ACTTGAACCCTGATGAACCGA 59.303 47.619 0.00 0.00 0.00 4.69
791 821 2.185004 ACTTGAACCCTGATGAACCG 57.815 50.000 0.00 0.00 0.00 4.44
793 823 4.099419 ACCAAAACTTGAACCCTGATGAAC 59.901 41.667 0.00 0.00 0.00 3.18
794 824 4.099266 CACCAAAACTTGAACCCTGATGAA 59.901 41.667 0.00 0.00 0.00 2.57
796 826 3.799917 GCACCAAAACTTGAACCCTGATG 60.800 47.826 0.00 0.00 0.00 3.07
797 827 2.365293 GCACCAAAACTTGAACCCTGAT 59.635 45.455 0.00 0.00 0.00 2.90
801 831 1.269051 CGAGCACCAAAACTTGAACCC 60.269 52.381 0.00 0.00 0.00 4.11
802 832 1.864029 GCGAGCACCAAAACTTGAACC 60.864 52.381 0.00 0.00 0.00 3.62
803 833 1.202245 TGCGAGCACCAAAACTTGAAC 60.202 47.619 0.00 0.00 0.00 3.18
805 835 1.317613 ATGCGAGCACCAAAACTTGA 58.682 45.000 0.00 0.00 0.00 3.02
806 836 2.138596 AATGCGAGCACCAAAACTTG 57.861 45.000 0.00 0.00 0.00 3.16
807 837 4.519540 AATAATGCGAGCACCAAAACTT 57.480 36.364 0.00 0.00 0.00 2.66
808 838 4.218417 AGAAATAATGCGAGCACCAAAACT 59.782 37.500 0.00 0.00 0.00 2.66
809 839 4.324402 CAGAAATAATGCGAGCACCAAAAC 59.676 41.667 0.00 0.00 0.00 2.43
810 840 4.022416 ACAGAAATAATGCGAGCACCAAAA 60.022 37.500 0.00 0.00 0.00 2.44
811 841 3.505680 ACAGAAATAATGCGAGCACCAAA 59.494 39.130 0.00 0.00 0.00 3.28
814 844 5.007626 TGAATACAGAAATAATGCGAGCACC 59.992 40.000 0.00 0.00 0.00 5.01
815 845 6.048073 TGAATACAGAAATAATGCGAGCAC 57.952 37.500 0.00 0.00 0.00 4.40
817 847 7.857389 TGAAATGAATACAGAAATAATGCGAGC 59.143 33.333 0.00 0.00 0.00 5.03
818 848 9.378597 CTGAAATGAATACAGAAATAATGCGAG 57.621 33.333 0.00 0.00 34.07 5.03
820 850 8.344831 TCCTGAAATGAATACAGAAATAATGCG 58.655 33.333 0.00 0.00 34.07 4.73
834 1018 5.404466 TCGCCAAAAATCCTGAAATGAAT 57.596 34.783 0.00 0.00 0.00 2.57
837 1021 3.307782 GCATCGCCAAAAATCCTGAAATG 59.692 43.478 0.00 0.00 0.00 2.32
838 1022 3.524541 GCATCGCCAAAAATCCTGAAAT 58.475 40.909 0.00 0.00 0.00 2.17
839 1023 2.670789 CGCATCGCCAAAAATCCTGAAA 60.671 45.455 0.00 0.00 0.00 2.69
854 1038 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
855 1039 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
856 1040 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
858 1042 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
859 1043 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
862 1046 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
865 1049 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
866 1050 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
887 1071 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
888 1072 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
901 1085 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
906 1090 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
908 1092 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
909 1093 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
910 1094 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
911 1095 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
912 1096 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
913 1097 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
914 1098 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
916 1100 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
917 1101 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
919 1103 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
920 1104 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
922 1106 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
923 1107 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
924 1108 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
925 1109 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
927 1352 0.390492 CAGACTGAGCCGGCATATCA 59.610 55.000 31.54 22.44 0.00 2.15
946 1462 7.247929 AGCTTCTGTCTTTTTAACACAGTAC 57.752 36.000 0.00 0.00 38.94 2.73
957 1473 6.920210 GCAAGTAAATGAAGCTTCTGTCTTTT 59.080 34.615 26.09 17.98 0.00 2.27
959 1475 5.334414 CGCAAGTAAATGAAGCTTCTGTCTT 60.334 40.000 26.09 18.23 0.00 3.01
961 1477 4.398247 CGCAAGTAAATGAAGCTTCTGTC 58.602 43.478 26.09 12.33 0.00 3.51
980 3177 0.815734 GGACCTTGACTAGCTACGCA 59.184 55.000 0.00 0.00 0.00 5.24
991 3188 2.268920 GCTCGCCATGGACCTTGA 59.731 61.111 18.40 3.42 0.00 3.02
993 3190 4.473520 CCGCTCGCCATGGACCTT 62.474 66.667 18.40 0.00 0.00 3.50
998 3195 3.976701 AAAGACCCGCTCGCCATGG 62.977 63.158 7.63 7.63 0.00 3.66
1003 3200 2.815647 CAGGAAAGACCCGCTCGC 60.816 66.667 0.00 0.00 40.05 5.03
1004 3201 2.815647 GCAGGAAAGACCCGCTCG 60.816 66.667 0.00 0.00 40.05 5.03
1005 3202 1.448717 GAGCAGGAAAGACCCGCTC 60.449 63.158 8.08 8.08 41.61 5.03
1009 3206 1.604915 GAGGGAGCAGGAAAGACCC 59.395 63.158 0.00 0.00 40.05 4.46
1010 3207 1.604915 GGAGGGAGCAGGAAAGACC 59.395 63.158 0.00 0.00 39.35 3.85
1012 3209 1.229209 ACGGAGGGAGCAGGAAAGA 60.229 57.895 0.00 0.00 0.00 2.52
1013 3210 1.219393 GACGGAGGGAGCAGGAAAG 59.781 63.158 0.00 0.00 0.00 2.62
1015 3212 2.683933 GGACGGAGGGAGCAGGAA 60.684 66.667 0.00 0.00 0.00 3.36
1017 3214 3.375443 TAGGGACGGAGGGAGCAGG 62.375 68.421 0.00 0.00 0.00 4.85
1018 3215 2.128507 GTAGGGACGGAGGGAGCAG 61.129 68.421 0.00 0.00 0.00 4.24
1019 3216 2.043248 GTAGGGACGGAGGGAGCA 60.043 66.667 0.00 0.00 0.00 4.26
1020 3217 2.128507 CAGTAGGGACGGAGGGAGC 61.129 68.421 0.00 0.00 0.00 4.70
1021 3218 1.455959 CCAGTAGGGACGGAGGGAG 60.456 68.421 0.00 0.00 40.01 4.30
1023 3220 1.305887 AACCAGTAGGGACGGAGGG 60.306 63.158 0.00 0.00 41.15 4.30
1024 3221 0.324460 AGAACCAGTAGGGACGGAGG 60.324 60.000 0.00 0.00 41.15 4.30
1025 3222 1.104630 GAGAACCAGTAGGGACGGAG 58.895 60.000 0.00 0.00 41.15 4.63
1027 3224 1.807886 CGAGAACCAGTAGGGACGG 59.192 63.158 0.00 0.00 41.15 4.79
1028 3225 1.139095 GCGAGAACCAGTAGGGACG 59.861 63.158 0.00 0.00 41.15 4.79
1029 3226 0.173708 CTGCGAGAACCAGTAGGGAC 59.826 60.000 0.00 0.00 41.15 4.46
1032 3229 1.066303 CTAGCTGCGAGAACCAGTAGG 59.934 57.143 3.47 0.00 42.21 3.18
1033 3230 1.535015 GCTAGCTGCGAGAACCAGTAG 60.535 57.143 14.15 0.00 32.93 2.57
1034 3231 0.456221 GCTAGCTGCGAGAACCAGTA 59.544 55.000 14.15 0.00 32.93 2.74
1035 3232 1.216710 GCTAGCTGCGAGAACCAGT 59.783 57.895 14.15 0.00 32.93 4.00
1036 3233 4.100981 GCTAGCTGCGAGAACCAG 57.899 61.111 14.15 0.00 0.00 4.00
1046 3243 0.031857 CACCATCTCCGAGCTAGCTG 59.968 60.000 24.99 14.20 0.00 4.24
1047 3244 0.106469 TCACCATCTCCGAGCTAGCT 60.106 55.000 19.45 19.45 0.00 3.32
1048 3245 0.747255 TTCACCATCTCCGAGCTAGC 59.253 55.000 6.62 6.62 0.00 3.42
1049 3246 2.302260 TCTTCACCATCTCCGAGCTAG 58.698 52.381 0.00 0.00 0.00 3.42
1050 3247 2.437085 TCTTCACCATCTCCGAGCTA 57.563 50.000 0.00 0.00 0.00 3.32
1053 3250 3.573538 AGATGATCTTCACCATCTCCGAG 59.426 47.826 10.90 0.00 44.28 4.63
1054 3251 3.570540 AGATGATCTTCACCATCTCCGA 58.429 45.455 10.90 0.00 44.28 4.55
1098 3376 0.693049 AATGAAGCCAGAGGAACGGT 59.307 50.000 0.00 0.00 0.00 4.83
1102 3380 2.795329 GTGGAAATGAAGCCAGAGGAA 58.205 47.619 0.00 0.00 34.22 3.36
1108 3386 1.522668 CAGTCGTGGAAATGAAGCCA 58.477 50.000 0.00 0.00 0.00 4.75
1134 3412 3.031736 GTGGAGAGATGTGCTTACCCTA 58.968 50.000 0.00 0.00 0.00 3.53
1177 3465 3.221771 TCTGTAAGTGCACAAAGCCATT 58.778 40.909 21.04 4.99 44.83 3.16
1194 3498 9.109393 GTATATGGACATGTAACATGTTTCTGT 57.891 33.333 17.78 16.59 31.52 3.41
1205 3509 7.659799 GCACACCATTAGTATATGGACATGTAA 59.340 37.037 9.49 0.00 46.63 2.41
1206 3510 7.158697 GCACACCATTAGTATATGGACATGTA 58.841 38.462 9.49 0.00 46.63 2.29
1207 3511 5.997746 GCACACCATTAGTATATGGACATGT 59.002 40.000 0.00 0.00 46.63 3.21
1215 3519 4.321452 CCCGTACGCACACCATTAGTATAT 60.321 45.833 10.49 0.00 0.00 0.86
1217 3521 2.223876 CCCGTACGCACACCATTAGTAT 60.224 50.000 10.49 0.00 0.00 2.12
1222 3526 0.035820 ATTCCCGTACGCACACCATT 60.036 50.000 10.49 0.00 0.00 3.16
1227 3531 1.301795 TTGCATTCCCGTACGCACA 60.302 52.632 10.49 0.00 33.29 4.57
1228 3532 1.133869 GTTGCATTCCCGTACGCAC 59.866 57.895 10.49 0.00 33.29 5.34
1229 3533 2.384309 CGTTGCATTCCCGTACGCA 61.384 57.895 10.49 0.00 0.00 5.24
1230 3534 2.398036 CGTTGCATTCCCGTACGC 59.602 61.111 10.49 0.00 0.00 4.42
1231 3535 1.902716 TTGCGTTGCATTCCCGTACG 61.903 55.000 8.69 8.69 38.76 3.67
1237 3541 3.953388 GCATTTTGCGTTGCATTCC 57.047 47.368 0.00 0.00 38.76 3.01
1542 3897 0.391130 CGAGACCCTTGGATGCGAAA 60.391 55.000 0.00 0.00 0.00 3.46
1548 3903 2.041265 AGGCCGAGACCCTTGGAT 59.959 61.111 0.00 0.00 37.20 3.41
1739 4112 2.615912 CCAGGTAGGTGTACGTAGCTAC 59.384 54.545 14.19 14.19 45.96 3.58
1740 4113 2.923121 CCAGGTAGGTGTACGTAGCTA 58.077 52.381 13.87 0.00 41.35 3.32
1741 4114 1.760192 CCAGGTAGGTGTACGTAGCT 58.240 55.000 9.79 9.79 43.22 3.32
1752 4125 1.296715 GCCAGTGACACCAGGTAGG 59.703 63.158 14.23 4.17 45.67 3.18
1753 4126 0.320771 GTGCCAGTGACACCAGGTAG 60.321 60.000 14.23 0.00 31.67 3.18
1754 4127 1.752198 GTGCCAGTGACACCAGGTA 59.248 57.895 14.23 8.53 31.67 3.08
1755 4128 2.510906 GTGCCAGTGACACCAGGT 59.489 61.111 14.23 0.00 31.67 4.00
1760 4133 4.250305 ACCCGGTGCCAGTGACAC 62.250 66.667 0.13 0.13 37.31 3.67
1761 4134 3.936203 GACCCGGTGCCAGTGACA 61.936 66.667 0.00 0.00 0.00 3.58
1762 4135 4.699522 GGACCCGGTGCCAGTGAC 62.700 72.222 0.00 0.00 0.00 3.67
1764 4137 3.567579 ATTGGACCCGGTGCCAGTG 62.568 63.158 6.61 0.00 35.23 3.66
1765 4138 3.256960 ATTGGACCCGGTGCCAGT 61.257 61.111 6.61 7.23 35.23 4.00
1766 4139 1.622607 TAGATTGGACCCGGTGCCAG 61.623 60.000 6.61 0.00 35.23 4.85
1767 4140 1.613928 TAGATTGGACCCGGTGCCA 60.614 57.895 6.61 8.34 0.00 4.92
1768 4141 1.153229 GTAGATTGGACCCGGTGCC 60.153 63.158 6.61 0.98 0.00 5.01
1769 4142 0.743345 GTGTAGATTGGACCCGGTGC 60.743 60.000 1.25 1.25 0.00 5.01
1770 4143 0.902531 AGTGTAGATTGGACCCGGTG 59.097 55.000 0.00 0.00 0.00 4.94
1771 4144 1.278127 CAAGTGTAGATTGGACCCGGT 59.722 52.381 0.00 0.00 0.00 5.28
1772 4145 2.012051 GCAAGTGTAGATTGGACCCGG 61.012 57.143 0.00 0.00 0.00 5.73
1773 4146 1.066143 AGCAAGTGTAGATTGGACCCG 60.066 52.381 0.00 0.00 0.00 5.28
1774 4147 2.789409 AGCAAGTGTAGATTGGACCC 57.211 50.000 0.00 0.00 0.00 4.46
1775 4148 5.488341 TCTTAAGCAAGTGTAGATTGGACC 58.512 41.667 0.00 0.00 33.20 4.46
1776 4149 8.718102 TTATCTTAAGCAAGTGTAGATTGGAC 57.282 34.615 0.00 0.00 33.20 4.02
1777 4150 9.547753 GATTATCTTAAGCAAGTGTAGATTGGA 57.452 33.333 0.00 0.00 33.20 3.53
1778 4151 8.778358 GGATTATCTTAAGCAAGTGTAGATTGG 58.222 37.037 0.00 0.00 33.20 3.16
1779 4152 9.330063 TGGATTATCTTAAGCAAGTGTAGATTG 57.670 33.333 0.00 0.00 33.20 2.67
1782 4155 9.330063 CAATGGATTATCTTAAGCAAGTGTAGA 57.670 33.333 0.00 0.00 33.20 2.59
1783 4156 9.330063 TCAATGGATTATCTTAAGCAAGTGTAG 57.670 33.333 0.00 0.00 33.20 2.74
1784 4157 9.851686 ATCAATGGATTATCTTAAGCAAGTGTA 57.148 29.630 0.00 0.00 33.20 2.90
1785 4158 8.757982 ATCAATGGATTATCTTAAGCAAGTGT 57.242 30.769 0.00 0.00 33.20 3.55
1802 4175 9.559732 CAATGACCTATACACTAAATCAATGGA 57.440 33.333 0.00 0.00 0.00 3.41
1803 4176 9.559732 TCAATGACCTATACACTAAATCAATGG 57.440 33.333 0.00 0.00 0.00 3.16
1831 4204 5.818336 TCCACGTAGAAGAACACATCAAAAA 59.182 36.000 0.00 0.00 0.00 1.94
1832 4205 5.235616 GTCCACGTAGAAGAACACATCAAAA 59.764 40.000 0.00 0.00 0.00 2.44
1833 4206 4.748102 GTCCACGTAGAAGAACACATCAAA 59.252 41.667 0.00 0.00 0.00 2.69
1834 4207 4.202172 TGTCCACGTAGAAGAACACATCAA 60.202 41.667 0.00 0.00 0.00 2.57
1835 4208 3.319689 TGTCCACGTAGAAGAACACATCA 59.680 43.478 0.00 0.00 0.00 3.07
1836 4209 3.673809 GTGTCCACGTAGAAGAACACATC 59.326 47.826 0.00 0.00 0.00 3.06
1837 4210 3.554337 GGTGTCCACGTAGAAGAACACAT 60.554 47.826 6.15 0.00 0.00 3.21
1838 4211 2.223876 GGTGTCCACGTAGAAGAACACA 60.224 50.000 6.15 0.00 0.00 3.72
1839 4212 2.401351 GGTGTCCACGTAGAAGAACAC 58.599 52.381 0.00 0.00 0.00 3.32
1840 4213 1.001048 CGGTGTCCACGTAGAAGAACA 60.001 52.381 0.00 0.00 0.00 3.18
1841 4214 1.668047 CCGGTGTCCACGTAGAAGAAC 60.668 57.143 0.00 0.00 0.00 3.01
1842 4215 0.599558 CCGGTGTCCACGTAGAAGAA 59.400 55.000 0.00 0.00 0.00 2.52
1843 4216 1.246056 CCCGGTGTCCACGTAGAAGA 61.246 60.000 0.00 0.00 0.00 2.87
1844 4217 1.214589 CCCGGTGTCCACGTAGAAG 59.785 63.158 0.00 0.00 0.00 2.85
1845 4218 0.251121 TACCCGGTGTCCACGTAGAA 60.251 55.000 0.00 0.00 0.00 2.10
1846 4219 0.251121 TTACCCGGTGTCCACGTAGA 60.251 55.000 0.00 0.00 0.00 2.59
1847 4220 0.819582 ATTACCCGGTGTCCACGTAG 59.180 55.000 0.00 0.00 0.00 3.51
1848 4221 0.817013 GATTACCCGGTGTCCACGTA 59.183 55.000 0.00 0.00 0.00 3.57
1849 4222 0.901580 AGATTACCCGGTGTCCACGT 60.902 55.000 0.00 0.00 0.00 4.49
1850 4223 0.248289 AAGATTACCCGGTGTCCACG 59.752 55.000 0.00 0.00 0.00 4.94
1851 4224 1.276989 TGAAGATTACCCGGTGTCCAC 59.723 52.381 0.00 0.00 0.00 4.02
1852 4225 1.553248 CTGAAGATTACCCGGTGTCCA 59.447 52.381 0.00 0.00 0.00 4.02
1853 4226 1.553704 ACTGAAGATTACCCGGTGTCC 59.446 52.381 0.00 0.00 0.00 4.02
1854 4227 2.496470 AGACTGAAGATTACCCGGTGTC 59.504 50.000 0.00 0.00 0.00 3.67
1855 4228 2.233922 CAGACTGAAGATTACCCGGTGT 59.766 50.000 0.00 0.00 0.00 4.16
1856 4229 2.418746 CCAGACTGAAGATTACCCGGTG 60.419 54.545 3.32 0.00 0.00 4.94
1857 4230 1.831736 CCAGACTGAAGATTACCCGGT 59.168 52.381 3.32 0.00 0.00 5.28
1858 4231 1.139058 CCCAGACTGAAGATTACCCGG 59.861 57.143 3.32 0.00 0.00 5.73
1859 4232 1.831736 ACCCAGACTGAAGATTACCCG 59.168 52.381 3.32 0.00 0.00 5.28
1860 4233 3.679083 CGAACCCAGACTGAAGATTACCC 60.679 52.174 3.32 0.00 0.00 3.69
1861 4234 3.522553 CGAACCCAGACTGAAGATTACC 58.477 50.000 3.32 0.00 0.00 2.85
1862 4235 2.930682 GCGAACCCAGACTGAAGATTAC 59.069 50.000 3.32 0.00 0.00 1.89
1863 4236 2.093658 GGCGAACCCAGACTGAAGATTA 60.094 50.000 3.32 0.00 0.00 1.75
1864 4237 1.339151 GGCGAACCCAGACTGAAGATT 60.339 52.381 3.32 0.00 0.00 2.40
1865 4238 0.250513 GGCGAACCCAGACTGAAGAT 59.749 55.000 3.32 0.00 0.00 2.40
1866 4239 1.671742 GGCGAACCCAGACTGAAGA 59.328 57.895 3.32 0.00 0.00 2.87
1867 4240 4.285851 GGCGAACCCAGACTGAAG 57.714 61.111 3.32 0.00 0.00 3.02
1877 4250 1.515521 CTTGTTGTCAGGGGCGAACC 61.516 60.000 0.00 0.00 39.11 3.62
1878 4251 0.534203 TCTTGTTGTCAGGGGCGAAC 60.534 55.000 0.00 0.00 0.00 3.95
1879 4252 0.250295 CTCTTGTTGTCAGGGGCGAA 60.250 55.000 0.00 0.00 0.00 4.70
1880 4253 1.371183 CTCTTGTTGTCAGGGGCGA 59.629 57.895 0.00 0.00 0.00 5.54
1881 4254 2.328099 GCTCTTGTTGTCAGGGGCG 61.328 63.158 0.00 0.00 37.40 6.13
1882 4255 0.610232 ATGCTCTTGTTGTCAGGGGC 60.610 55.000 0.00 0.00 45.60 5.80
1883 4256 1.171308 CATGCTCTTGTTGTCAGGGG 58.829 55.000 0.00 0.00 0.00 4.79
1884 4257 0.524862 GCATGCTCTTGTTGTCAGGG 59.475 55.000 11.37 0.00 0.00 4.45
1885 4258 1.199327 CAGCATGCTCTTGTTGTCAGG 59.801 52.381 19.68 0.00 0.00 3.86
1886 4259 1.878088 ACAGCATGCTCTTGTTGTCAG 59.122 47.619 19.68 4.92 42.53 3.51
1887 4260 1.971481 ACAGCATGCTCTTGTTGTCA 58.029 45.000 19.68 0.00 42.53 3.58
1888 4261 2.608467 GACAGCATGCTCTTGTTGTC 57.392 50.000 19.68 17.82 46.00 3.18
1889 4262 0.870393 CGACAGCATGCTCTTGTTGT 59.130 50.000 19.68 12.84 42.74 3.32
1890 4263 0.167470 CCGACAGCATGCTCTTGTTG 59.833 55.000 19.68 17.12 42.53 3.33
1891 4264 0.035317 TCCGACAGCATGCTCTTGTT 59.965 50.000 19.68 0.00 42.53 2.83
1892 4265 0.390866 CTCCGACAGCATGCTCTTGT 60.391 55.000 19.68 14.51 42.53 3.16
1893 4266 0.108472 TCTCCGACAGCATGCTCTTG 60.108 55.000 19.68 10.56 42.53 3.02
1894 4267 0.829333 ATCTCCGACAGCATGCTCTT 59.171 50.000 19.68 7.79 42.53 2.85
1895 4268 0.104487 CATCTCCGACAGCATGCTCT 59.896 55.000 19.68 6.08 42.53 4.09
1896 4269 0.879400 CCATCTCCGACAGCATGCTC 60.879 60.000 19.68 7.10 42.53 4.26
2035 4408 2.264813 GAATTTACCTGTAGCGACGCA 58.735 47.619 23.70 5.17 0.00 5.24
2046 4419 0.109597 ACGCGTCGTCGAATTTACCT 60.110 50.000 5.58 0.00 33.69 3.08
2092 4465 2.877691 GGCGTTGCCCATCTTGAC 59.122 61.111 0.00 0.00 44.06 3.18
2122 4495 0.795735 CGTATGTCTTCGTCGCCGTT 60.796 55.000 0.00 0.00 35.01 4.44
2123 4496 1.226211 CGTATGTCTTCGTCGCCGT 60.226 57.895 0.00 0.00 35.01 5.68
2132 4505 5.498393 TCTCTAGTTGAGGACGTATGTCTT 58.502 41.667 14.61 7.26 44.83 3.01
2212 4599 9.722056 GCGAAAGTGTTATGATTAAAGATTCAT 57.278 29.630 0.00 0.00 36.57 2.57
2226 4613 1.806542 CTGGTGCTGCGAAAGTGTTAT 59.193 47.619 0.00 0.00 0.00 1.89
2260 4647 6.090898 ACACGAGCAGTAACAATAGACAAATC 59.909 38.462 0.00 0.00 0.00 2.17
2456 4880 9.981114 ACAACGGATTCTTCTTTTAATGATTTT 57.019 25.926 0.00 0.00 0.00 1.82
2459 4883 9.981114 AAAACAACGGATTCTTCTTTTAATGAT 57.019 25.926 0.00 0.00 0.00 2.45
2531 7296 6.200665 TCTGCTCGATTTTTCAACCATTTTTG 59.799 34.615 0.00 0.00 0.00 2.44
2536 7301 5.452078 TTTCTGCTCGATTTTTCAACCAT 57.548 34.783 0.00 0.00 0.00 3.55
2639 7461 5.155278 TGGCAGGTTTTTCTCGATAAGTA 57.845 39.130 0.00 0.00 0.00 2.24
2668 7490 0.026803 GCACTTGTAGCGCTATGTGC 59.973 55.000 34.42 34.42 42.69 4.57
2793 7893 5.104374 CCAGCATAATTAAAGTGCAACCTG 58.896 41.667 11.15 2.27 41.19 4.00
2970 8072 6.204359 GTTGTCGAGACTAAACTGTAGACAA 58.796 40.000 4.78 3.92 42.63 3.18
2973 8075 4.751600 TCGTTGTCGAGACTAAACTGTAGA 59.248 41.667 4.78 0.00 41.35 2.59
3091 8228 3.343941 TTAAGAATAGGCGCCAACTGT 57.656 42.857 31.54 10.27 0.00 3.55
3092 8229 3.003689 CCATTAAGAATAGGCGCCAACTG 59.996 47.826 31.54 11.66 0.00 3.16
3093 8230 3.214328 CCATTAAGAATAGGCGCCAACT 58.786 45.455 31.54 18.24 0.00 3.16
3094 8231 2.293399 CCCATTAAGAATAGGCGCCAAC 59.707 50.000 31.54 16.18 0.00 3.77
3095 8232 2.582052 CCCATTAAGAATAGGCGCCAA 58.418 47.619 31.54 12.90 0.00 4.52
3096 8233 1.817740 GCCCATTAAGAATAGGCGCCA 60.818 52.381 31.54 15.56 36.00 5.69
3097 8234 0.881796 GCCCATTAAGAATAGGCGCC 59.118 55.000 21.89 21.89 36.00 6.53
3098 8235 0.881796 GGCCCATTAAGAATAGGCGC 59.118 55.000 0.00 0.00 45.22 6.53
3099 8236 2.154462 CTGGCCCATTAAGAATAGGCG 58.846 52.381 0.00 0.00 45.22 5.52
3100 8237 1.889170 GCTGGCCCATTAAGAATAGGC 59.111 52.381 0.00 0.55 43.80 3.93
3145 8296 1.133915 TCCACTTTGGTGTGTTCCCTC 60.134 52.381 0.00 0.00 41.53 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.