Multiple sequence alignment - TraesCS7A01G221600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G221600 chr7A 100.000 3935 0 0 1 3935 190468348 190472282 0.000000e+00 7267
1 TraesCS7A01G221600 chr7D 94.564 1490 58 16 1980 3458 181607696 181606219 0.000000e+00 2281
2 TraesCS7A01G221600 chr7D 96.375 938 28 5 856 1793 181608765 181607834 0.000000e+00 1539
3 TraesCS7A01G221600 chr7D 84.887 622 86 7 1 615 181609578 181608958 4.320000e-174 621
4 TraesCS7A01G221600 chr7D 95.847 313 11 1 3605 3915 181605864 181605552 4.540000e-139 505
5 TraesCS7A01G221600 chr7D 90.850 153 4 2 1827 1969 181607833 181607681 3.100000e-46 196
6 TraesCS7A01G221600 chr7D 89.116 147 11 3 3462 3603 181606173 181606027 1.120000e-40 178
7 TraesCS7A01G221600 chr7B 90.520 1424 88 32 2526 3915 149612448 149611038 0.000000e+00 1838
8 TraesCS7A01G221600 chr7B 97.030 909 22 4 856 1763 149614478 149613574 0.000000e+00 1524
9 TraesCS7A01G221600 chr7B 91.947 683 27 13 1845 2525 149613147 149612491 0.000000e+00 931


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G221600 chr7A 190468348 190472282 3934 False 7267.000000 7267 100.000000 1 3935 1 chr7A.!!$F1 3934
1 TraesCS7A01G221600 chr7D 181605552 181609578 4026 True 886.666667 2281 91.939833 1 3915 6 chr7D.!!$R1 3914
2 TraesCS7A01G221600 chr7B 149611038 149614478 3440 True 1431.000000 1838 93.165667 856 3915 3 chr7B.!!$R1 3059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
803 839 0.034896 CTGCTAAAGGGTCCGTGTGT 59.965 55.0 0.00 0.0 0.0 3.72 F
824 860 0.319900 TGCGCTCACTCACCTTCTTC 60.320 55.0 9.73 0.0 0.0 2.87 F
826 862 0.605589 CGCTCACTCACCTTCTTCCT 59.394 55.0 0.00 0.0 0.0 3.36 F
1813 1850 0.105913 GGGTAGGACAGGGGAGAGAG 60.106 65.0 0.00 0.0 0.0 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 1831 0.105913 CTCTCTCCCCTGTCCTACCC 60.106 65.000 0.00 0.0 0.0 3.69 R
1795 1832 0.632294 ACTCTCTCCCCTGTCCTACC 59.368 60.000 0.00 0.0 0.0 3.18 R
2434 2840 0.883833 CCAAACTTGCTCGCTCCAAT 59.116 50.000 0.00 0.0 0.0 3.16 R
3453 3911 1.606313 AAGGCAATTGACGTGGGGG 60.606 57.895 10.34 0.0 0.0 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.038329 AGGACGGGAATCCCACGA 59.962 61.111 19.81 0.00 45.83 4.35
68 69 1.526887 CACGGCCATGGTGGTAGAT 59.473 57.895 14.67 0.00 40.46 1.98
70 71 0.980754 ACGGCCATGGTGGTAGATGA 60.981 55.000 14.67 0.00 40.46 2.92
75 76 2.746472 GCCATGGTGGTAGATGACTTCC 60.746 54.545 14.67 0.00 40.46 3.46
80 81 0.681887 TGGTAGATGACTTCCGCGGA 60.682 55.000 27.28 27.28 36.55 5.54
89 90 1.079127 CTTCCGCGGAGGTCATGTT 60.079 57.895 29.20 0.00 41.99 2.71
107 108 2.176314 TTGCTGGACTCTGCGAGCAT 62.176 55.000 0.00 0.00 46.50 3.79
109 110 2.125391 TGGACTCTGCGAGCATGC 60.125 61.111 10.51 10.51 32.04 4.06
122 123 2.513204 CATGCGCTGGAGGACTGG 60.513 66.667 9.73 0.00 0.00 4.00
134 135 4.115270 GACTGGGTCCTCGTCCTT 57.885 61.111 0.00 0.00 0.00 3.36
135 136 1.891616 GACTGGGTCCTCGTCCTTC 59.108 63.158 0.00 0.00 0.00 3.46
142 143 1.744368 TCCTCGTCCTTCGACTCGG 60.744 63.158 0.00 0.00 44.01 4.63
154 156 1.134818 TCGACTCGGGGATTTGATGTG 60.135 52.381 0.00 0.00 0.00 3.21
157 159 0.255890 CTCGGGGATTTGATGTGGGT 59.744 55.000 0.00 0.00 0.00 4.51
172 174 4.908601 TGTGGGTCATCATCTTAGTGTT 57.091 40.909 0.00 0.00 0.00 3.32
173 175 4.578871 TGTGGGTCATCATCTTAGTGTTG 58.421 43.478 0.00 0.00 0.00 3.33
184 186 6.436027 TCATCTTAGTGTTGTCCTCCTCTAT 58.564 40.000 0.00 0.00 0.00 1.98
186 188 8.059461 TCATCTTAGTGTTGTCCTCCTCTATAA 58.941 37.037 0.00 0.00 0.00 0.98
188 190 4.985538 AGTGTTGTCCTCCTCTATAACG 57.014 45.455 0.00 0.00 0.00 3.18
190 192 4.771054 AGTGTTGTCCTCCTCTATAACGTT 59.229 41.667 5.88 5.88 0.00 3.99
204 206 1.052124 AACGTTGTCCTCCACCTCCA 61.052 55.000 0.00 0.00 0.00 3.86
246 248 2.095252 GCTTCGAAGGCAGTCGTCC 61.095 63.158 25.77 2.72 41.80 4.79
250 252 2.050350 CGAAGGCAGTCGTCCCCTA 61.050 63.158 2.76 0.00 36.26 3.53
251 253 1.392710 CGAAGGCAGTCGTCCCCTAT 61.393 60.000 2.76 0.00 36.26 2.57
253 255 2.037144 GAAGGCAGTCGTCCCCTATTA 58.963 52.381 0.00 0.00 0.00 0.98
257 259 2.223994 GGCAGTCGTCCCCTATTAGTTC 60.224 54.545 0.00 0.00 0.00 3.01
273 277 2.114616 AGTTCCATAGCTCCACCTCAG 58.885 52.381 0.00 0.00 0.00 3.35
282 286 0.036875 CTCCACCTCAGTTGGAACCC 59.963 60.000 0.00 0.00 0.00 4.11
284 288 1.752198 CACCTCAGTTGGAACCCGA 59.248 57.895 0.00 0.00 0.00 5.14
287 291 1.374252 CTCAGTTGGAACCCGACGG 60.374 63.158 6.99 6.99 42.48 4.79
288 292 1.812686 CTCAGTTGGAACCCGACGGA 61.813 60.000 17.49 6.16 42.48 4.69
301 306 1.472552 CCGACGGAGCCATGACAATTA 60.473 52.381 8.64 0.00 0.00 1.40
308 313 4.137543 GGAGCCATGACAATTACCTAAGG 58.862 47.826 0.00 0.00 0.00 2.69
314 319 6.357367 CCATGACAATTACCTAAGGCTAAGT 58.643 40.000 0.00 0.00 0.00 2.24
319 324 6.970191 ACAATTACCTAAGGCTAAGTGGATT 58.030 36.000 0.00 0.00 0.00 3.01
326 331 1.440145 GGCTAAGTGGATTGCGAGGC 61.440 60.000 0.00 0.00 0.00 4.70
328 333 1.153449 TAAGTGGATTGCGAGGCGG 60.153 57.895 0.00 0.00 0.00 6.13
332 337 2.280797 GGATTGCGAGGCGGCATA 60.281 61.111 13.08 0.00 43.52 3.14
344 349 2.513897 GGCATAGTGGCGGTGGAC 60.514 66.667 0.00 0.00 31.79 4.02
346 351 2.202878 CATAGTGGCGGTGGACGG 60.203 66.667 0.00 0.00 44.51 4.79
354 359 3.382832 CGGTGGACGGAAGGAGCT 61.383 66.667 0.00 0.00 39.42 4.09
365 370 1.134551 GGAAGGAGCTGGAGATGTGAC 60.135 57.143 0.00 0.00 0.00 3.67
371 376 0.244994 GCTGGAGATGTGACGAGTGT 59.755 55.000 0.00 0.00 0.00 3.55
385 390 1.262950 CGAGTGTCTCTAGATGCCTCG 59.737 57.143 13.35 13.35 34.59 4.63
388 393 1.284408 GTCTCTAGATGCCTCGCGG 59.716 63.158 6.13 0.00 0.00 6.46
407 412 3.120786 GCGGCAAGCGTTTTATATACGAT 60.121 43.478 10.93 3.10 41.33 3.73
412 417 6.959311 GGCAAGCGTTTTATATACGATAATGG 59.041 38.462 10.93 0.05 41.33 3.16
445 450 3.747976 GGCGTGGGCAGCGAAAAT 61.748 61.111 4.18 0.00 42.47 1.82
468 473 2.093106 TCTCTGAGAAACTACTCCGGC 58.907 52.381 4.57 0.00 36.22 6.13
473 478 1.134560 GAGAAACTACTCCGGCGACAT 59.865 52.381 9.30 0.00 0.00 3.06
487 492 2.195922 GCGACATGAAAAATGGATGGC 58.804 47.619 0.00 0.00 0.00 4.40
522 527 2.359848 GGGGTATTAATGGGTGCGTTTC 59.640 50.000 0.00 0.00 0.00 2.78
524 529 3.314357 GGGTATTAATGGGTGCGTTTCTC 59.686 47.826 0.00 0.00 0.00 2.87
528 533 1.981256 AATGGGTGCGTTTCTCAGTT 58.019 45.000 0.00 0.00 0.00 3.16
567 574 5.036117 GAGTATACTCCATTGGCAGGAAA 57.964 43.478 20.40 0.00 37.02 3.13
568 575 5.041191 AGTATACTCCATTGGCAGGAAAG 57.959 43.478 0.00 0.00 34.08 2.62
569 576 4.721776 AGTATACTCCATTGGCAGGAAAGA 59.278 41.667 0.00 0.00 34.08 2.52
571 578 1.005215 ACTCCATTGGCAGGAAAGAGG 59.995 52.381 0.00 0.00 34.08 3.69
573 580 1.710244 TCCATTGGCAGGAAAGAGGAA 59.290 47.619 0.00 0.00 30.71 3.36
575 582 2.097825 CATTGGCAGGAAAGAGGAAGG 58.902 52.381 0.00 0.00 0.00 3.46
576 583 1.444933 TTGGCAGGAAAGAGGAAGGA 58.555 50.000 0.00 0.00 0.00 3.36
580 587 2.757314 GGCAGGAAAGAGGAAGGATTTG 59.243 50.000 0.00 0.00 0.00 2.32
593 600 4.700692 GGAAGGATTTGAAAGTACACTCCC 59.299 45.833 0.00 0.00 0.00 4.30
595 602 2.418976 GGATTTGAAAGTACACTCCCGC 59.581 50.000 0.00 0.00 0.00 6.13
615 622 2.325761 CCACGTCGGTTGAGTTTAGAG 58.674 52.381 0.00 0.00 0.00 2.43
617 624 3.378339 CACGTCGGTTGAGTTTAGAGTT 58.622 45.455 0.00 0.00 0.00 3.01
620 627 6.317088 CACGTCGGTTGAGTTTAGAGTTATA 58.683 40.000 0.00 0.00 0.00 0.98
621 628 6.803320 CACGTCGGTTGAGTTTAGAGTTATAA 59.197 38.462 0.00 0.00 0.00 0.98
622 629 6.803807 ACGTCGGTTGAGTTTAGAGTTATAAC 59.196 38.462 7.57 7.57 0.00 1.89
623 630 6.803320 CGTCGGTTGAGTTTAGAGTTATAACA 59.197 38.462 17.65 0.00 0.00 2.41
624 631 7.008086 CGTCGGTTGAGTTTAGAGTTATAACAG 59.992 40.741 17.65 0.00 0.00 3.16
625 632 6.810182 TCGGTTGAGTTTAGAGTTATAACAGC 59.190 38.462 17.65 9.04 0.00 4.40
626 633 6.035758 CGGTTGAGTTTAGAGTTATAACAGCC 59.964 42.308 17.65 6.49 0.00 4.85
629 636 7.719871 TGAGTTTAGAGTTATAACAGCCTCT 57.280 36.000 17.65 12.98 37.93 3.69
630 637 7.773149 TGAGTTTAGAGTTATAACAGCCTCTC 58.227 38.462 17.65 15.44 35.89 3.20
666 698 6.065374 TGAACAGCACCTTAACCTTCAAATA 58.935 36.000 0.00 0.00 0.00 1.40
667 699 6.719370 TGAACAGCACCTTAACCTTCAAATAT 59.281 34.615 0.00 0.00 0.00 1.28
668 700 6.515272 ACAGCACCTTAACCTTCAAATATG 57.485 37.500 0.00 0.00 0.00 1.78
669 701 6.245408 ACAGCACCTTAACCTTCAAATATGA 58.755 36.000 0.00 0.00 0.00 2.15
670 702 6.375455 ACAGCACCTTAACCTTCAAATATGAG 59.625 38.462 0.00 0.00 36.78 2.90
671 703 5.358160 AGCACCTTAACCTTCAAATATGAGC 59.642 40.000 0.00 0.00 36.78 4.26
672 704 5.358160 GCACCTTAACCTTCAAATATGAGCT 59.642 40.000 0.00 0.00 36.78 4.09
674 706 6.825721 CACCTTAACCTTCAAATATGAGCTCT 59.174 38.462 16.19 3.04 36.78 4.09
675 707 6.825721 ACCTTAACCTTCAAATATGAGCTCTG 59.174 38.462 16.19 4.30 36.78 3.35
676 708 6.825721 CCTTAACCTTCAAATATGAGCTCTGT 59.174 38.462 16.19 6.35 36.78 3.41
677 709 7.337942 CCTTAACCTTCAAATATGAGCTCTGTT 59.662 37.037 16.19 4.19 36.78 3.16
678 710 8.635765 TTAACCTTCAAATATGAGCTCTGTTT 57.364 30.769 16.19 10.09 36.78 2.83
679 711 6.506500 ACCTTCAAATATGAGCTCTGTTTG 57.493 37.500 22.10 22.10 36.78 2.93
680 712 6.006449 ACCTTCAAATATGAGCTCTGTTTGT 58.994 36.000 24.61 12.49 36.78 2.83
681 713 6.491403 ACCTTCAAATATGAGCTCTGTTTGTT 59.509 34.615 24.61 13.46 36.78 2.83
682 714 6.805271 CCTTCAAATATGAGCTCTGTTTGTTG 59.195 38.462 24.61 20.07 36.78 3.33
683 715 6.882610 TCAAATATGAGCTCTGTTTGTTGT 57.117 33.333 24.61 4.64 32.97 3.32
684 716 7.275888 TCAAATATGAGCTCTGTTTGTTGTT 57.724 32.000 24.61 5.84 32.97 2.83
685 717 7.140705 TCAAATATGAGCTCTGTTTGTTGTTG 58.859 34.615 24.61 14.07 32.97 3.33
686 718 6.639632 AATATGAGCTCTGTTTGTTGTTGT 57.360 33.333 16.19 0.00 0.00 3.32
687 719 4.989279 ATGAGCTCTGTTTGTTGTTGTT 57.011 36.364 16.19 0.00 0.00 2.83
688 720 4.095410 TGAGCTCTGTTTGTTGTTGTTG 57.905 40.909 16.19 0.00 0.00 3.33
689 721 3.505680 TGAGCTCTGTTTGTTGTTGTTGT 59.494 39.130 16.19 0.00 0.00 3.32
690 722 4.022416 TGAGCTCTGTTTGTTGTTGTTGTT 60.022 37.500 16.19 0.00 0.00 2.83
691 723 4.236935 AGCTCTGTTTGTTGTTGTTGTTG 58.763 39.130 0.00 0.00 0.00 3.33
692 724 3.987220 GCTCTGTTTGTTGTTGTTGTTGT 59.013 39.130 0.00 0.00 0.00 3.32
693 725 4.447389 GCTCTGTTTGTTGTTGTTGTTGTT 59.553 37.500 0.00 0.00 0.00 2.83
694 726 5.612276 GCTCTGTTTGTTGTTGTTGTTGTTG 60.612 40.000 0.00 0.00 0.00 3.33
695 727 5.352284 TCTGTTTGTTGTTGTTGTTGTTGT 58.648 33.333 0.00 0.00 0.00 3.32
696 728 5.812642 TCTGTTTGTTGTTGTTGTTGTTGTT 59.187 32.000 0.00 0.00 0.00 2.83
697 729 5.799960 TGTTTGTTGTTGTTGTTGTTGTTG 58.200 33.333 0.00 0.00 0.00 3.33
698 730 5.351465 TGTTTGTTGTTGTTGTTGTTGTTGT 59.649 32.000 0.00 0.00 0.00 3.32
699 731 6.128282 TGTTTGTTGTTGTTGTTGTTGTTGTT 60.128 30.769 0.00 0.00 0.00 2.83
700 732 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
701 733 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
702 734 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
703 735 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
704 736 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
705 737 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
706 738 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
707 739 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
708 740 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
709 741 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
710 742 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
712 744 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
736 768 1.344065 TTTGAGACAGGGGCGACTAA 58.656 50.000 0.00 0.00 0.00 2.24
738 770 0.895530 TGAGACAGGGGCGACTAAAG 59.104 55.000 0.00 0.00 0.00 1.85
740 772 1.757699 GAGACAGGGGCGACTAAAGAT 59.242 52.381 0.00 0.00 0.00 2.40
742 778 2.168728 AGACAGGGGCGACTAAAGATTC 59.831 50.000 0.00 0.00 0.00 2.52
745 781 3.773119 ACAGGGGCGACTAAAGATTCTTA 59.227 43.478 0.00 0.00 0.00 2.10
787 823 2.099756 GAGGTAAAATCACATGGGCTGC 59.900 50.000 0.00 0.00 0.00 5.25
798 834 2.124695 GGGCTGCTAAAGGGTCCG 60.125 66.667 0.00 0.00 0.00 4.79
803 839 0.034896 CTGCTAAAGGGTCCGTGTGT 59.965 55.000 0.00 0.00 0.00 3.72
816 852 1.882625 GTGTGTGTGCGCTCACTCA 60.883 57.895 34.30 32.94 43.49 3.41
818 854 2.280119 TGTGTGCGCTCACTCACC 60.280 61.111 34.30 15.26 43.49 4.02
819 855 2.029666 GTGTGCGCTCACTCACCT 59.970 61.111 29.80 0.00 43.49 4.00
820 856 1.595382 GTGTGCGCTCACTCACCTT 60.595 57.895 29.80 0.00 43.49 3.50
821 857 1.300931 TGTGCGCTCACTCACCTTC 60.301 57.895 9.73 0.00 43.49 3.46
822 858 1.005630 GTGCGCTCACTCACCTTCT 60.006 57.895 9.73 0.00 40.03 2.85
823 859 0.601311 GTGCGCTCACTCACCTTCTT 60.601 55.000 9.73 0.00 40.03 2.52
824 860 0.319900 TGCGCTCACTCACCTTCTTC 60.320 55.000 9.73 0.00 0.00 2.87
825 861 1.016653 GCGCTCACTCACCTTCTTCC 61.017 60.000 0.00 0.00 0.00 3.46
826 862 0.605589 CGCTCACTCACCTTCTTCCT 59.394 55.000 0.00 0.00 0.00 3.36
827 863 1.001406 CGCTCACTCACCTTCTTCCTT 59.999 52.381 0.00 0.00 0.00 3.36
828 864 2.694213 GCTCACTCACCTTCTTCCTTC 58.306 52.381 0.00 0.00 0.00 3.46
829 865 2.614229 GCTCACTCACCTTCTTCCTTCC 60.614 54.545 0.00 0.00 0.00 3.46
830 866 2.903135 CTCACTCACCTTCTTCCTTCCT 59.097 50.000 0.00 0.00 0.00 3.36
831 867 2.634940 TCACTCACCTTCTTCCTTCCTG 59.365 50.000 0.00 0.00 0.00 3.86
832 868 2.370189 CACTCACCTTCTTCCTTCCTGT 59.630 50.000 0.00 0.00 0.00 4.00
833 869 2.635427 ACTCACCTTCTTCCTTCCTGTC 59.365 50.000 0.00 0.00 0.00 3.51
834 870 2.903135 CTCACCTTCTTCCTTCCTGTCT 59.097 50.000 0.00 0.00 0.00 3.41
835 871 2.900546 TCACCTTCTTCCTTCCTGTCTC 59.099 50.000 0.00 0.00 0.00 3.36
836 872 2.027653 CACCTTCTTCCTTCCTGTCTCC 60.028 54.545 0.00 0.00 0.00 3.71
837 873 2.260822 CCTTCTTCCTTCCTGTCTCCA 58.739 52.381 0.00 0.00 0.00 3.86
838 874 2.639839 CCTTCTTCCTTCCTGTCTCCAA 59.360 50.000 0.00 0.00 0.00 3.53
839 875 3.073062 CCTTCTTCCTTCCTGTCTCCAAA 59.927 47.826 0.00 0.00 0.00 3.28
840 876 4.446311 CCTTCTTCCTTCCTGTCTCCAAAA 60.446 45.833 0.00 0.00 0.00 2.44
841 877 4.788925 TCTTCCTTCCTGTCTCCAAAAA 57.211 40.909 0.00 0.00 0.00 1.94
842 878 4.461198 TCTTCCTTCCTGTCTCCAAAAAC 58.539 43.478 0.00 0.00 0.00 2.43
843 879 3.943671 TCCTTCCTGTCTCCAAAAACA 57.056 42.857 0.00 0.00 0.00 2.83
844 880 4.243793 TCCTTCCTGTCTCCAAAAACAA 57.756 40.909 0.00 0.00 0.00 2.83
845 881 4.605183 TCCTTCCTGTCTCCAAAAACAAA 58.395 39.130 0.00 0.00 0.00 2.83
846 882 5.020132 TCCTTCCTGTCTCCAAAAACAAAA 58.980 37.500 0.00 0.00 0.00 2.44
847 883 5.482175 TCCTTCCTGTCTCCAAAAACAAAAA 59.518 36.000 0.00 0.00 0.00 1.94
848 884 5.580691 CCTTCCTGTCTCCAAAAACAAAAAC 59.419 40.000 0.00 0.00 0.00 2.43
849 885 5.730296 TCCTGTCTCCAAAAACAAAAACA 57.270 34.783 0.00 0.00 0.00 2.83
850 886 6.102897 TCCTGTCTCCAAAAACAAAAACAA 57.897 33.333 0.00 0.00 0.00 2.83
851 887 6.525629 TCCTGTCTCCAAAAACAAAAACAAA 58.474 32.000 0.00 0.00 0.00 2.83
852 888 6.992715 TCCTGTCTCCAAAAACAAAAACAAAA 59.007 30.769 0.00 0.00 0.00 2.44
853 889 7.499232 TCCTGTCTCCAAAAACAAAAACAAAAA 59.501 29.630 0.00 0.00 0.00 1.94
905 941 0.637195 CTCTTCCCCTCTCCCACCTA 59.363 60.000 0.00 0.00 0.00 3.08
1383 1419 2.124736 CGCCACCATCGACCCAAT 60.125 61.111 0.00 0.00 0.00 3.16
1395 1431 0.963962 GACCCAATCGGCGAGGTATA 59.036 55.000 17.87 0.00 31.10 1.47
1396 1432 1.549170 GACCCAATCGGCGAGGTATAT 59.451 52.381 17.87 0.84 31.10 0.86
1424 1461 5.233225 TGATCATAGAGCGGATGTCATTTC 58.767 41.667 0.00 0.00 0.00 2.17
1706 1743 3.705051 AGTTGTAACTGTCGGATAGGGA 58.295 45.455 6.71 0.00 37.98 4.20
1728 1765 6.399204 GATGCTAATCCTTTTGTTTTGCTG 57.601 37.500 0.00 0.00 0.00 4.41
1759 1796 6.595326 TGAAGAGTGGATGAATTACATGTGAC 59.405 38.462 9.11 0.00 39.56 3.67
1763 1800 5.105106 AGTGGATGAATTACATGTGACGGTA 60.105 40.000 9.11 0.00 39.56 4.02
1764 1801 5.758296 GTGGATGAATTACATGTGACGGTAT 59.242 40.000 9.11 0.00 39.56 2.73
1765 1802 6.926826 GTGGATGAATTACATGTGACGGTATA 59.073 38.462 9.11 0.00 39.56 1.47
1775 1812 7.830940 ACATGTGACGGTATAAAAATAACGA 57.169 32.000 9.61 0.00 39.40 3.85
1788 1825 2.891191 ATAACGAAACATGGGGGTGT 57.109 45.000 0.00 0.00 0.00 4.16
1792 1829 1.609210 GAAACATGGGGGTGTGGGG 60.609 63.158 0.00 0.00 31.49 4.96
1794 1831 2.671384 AAACATGGGGGTGTGGGGTG 62.671 60.000 0.00 0.00 31.49 4.61
1795 1832 4.380945 CATGGGGGTGTGGGGTGG 62.381 72.222 0.00 0.00 0.00 4.61
1800 1837 3.335729 GGGTGTGGGGTGGGTAGG 61.336 72.222 0.00 0.00 0.00 3.18
1801 1838 2.204029 GGTGTGGGGTGGGTAGGA 60.204 66.667 0.00 0.00 0.00 2.94
1802 1839 2.599757 GGTGTGGGGTGGGTAGGAC 61.600 68.421 0.00 0.00 0.00 3.85
1804 1841 1.537889 TGTGGGGTGGGTAGGACAG 60.538 63.158 0.00 0.00 0.00 3.51
1805 1842 2.124085 TGGGGTGGGTAGGACAGG 59.876 66.667 0.00 0.00 0.00 4.00
1806 1843 2.691252 GGGGTGGGTAGGACAGGG 60.691 72.222 0.00 0.00 0.00 4.45
1807 1844 2.691252 GGGTGGGTAGGACAGGGG 60.691 72.222 0.00 0.00 0.00 4.79
1808 1845 2.453054 GGTGGGTAGGACAGGGGA 59.547 66.667 0.00 0.00 0.00 4.81
1809 1846 1.689582 GGTGGGTAGGACAGGGGAG 60.690 68.421 0.00 0.00 0.00 4.30
1810 1847 1.390926 GTGGGTAGGACAGGGGAGA 59.609 63.158 0.00 0.00 0.00 3.71
1811 1848 0.688087 GTGGGTAGGACAGGGGAGAG 60.688 65.000 0.00 0.00 0.00 3.20
1812 1849 0.854039 TGGGTAGGACAGGGGAGAGA 60.854 60.000 0.00 0.00 0.00 3.10
1813 1850 0.105913 GGGTAGGACAGGGGAGAGAG 60.106 65.000 0.00 0.00 0.00 3.20
1953 2357 7.504911 CAGGATATGGTGATTTCTTTCCTCATT 59.495 37.037 0.00 0.00 30.05 2.57
1960 2364 7.927629 TGGTGATTTCTTTCCTCATTTTTGAAG 59.072 33.333 0.00 0.00 0.00 3.02
1961 2365 7.095481 GGTGATTTCTTTCCTCATTTTTGAAGC 60.095 37.037 0.00 0.00 0.00 3.86
1962 2366 7.439056 GTGATTTCTTTCCTCATTTTTGAAGCA 59.561 33.333 0.00 0.00 0.00 3.91
1963 2367 7.986320 TGATTTCTTTCCTCATTTTTGAAGCAA 59.014 29.630 0.00 0.00 0.00 3.91
1964 2368 7.538303 TTTCTTTCCTCATTTTTGAAGCAAC 57.462 32.000 0.00 0.00 0.00 4.17
1965 2369 6.219417 TCTTTCCTCATTTTTGAAGCAACA 57.781 33.333 0.00 0.00 0.00 3.33
1966 2370 6.275335 TCTTTCCTCATTTTTGAAGCAACAG 58.725 36.000 0.00 0.00 0.00 3.16
1967 2371 5.596836 TTCCTCATTTTTGAAGCAACAGT 57.403 34.783 0.00 0.00 0.00 3.55
1968 2372 5.596836 TCCTCATTTTTGAAGCAACAGTT 57.403 34.783 0.00 0.00 0.00 3.16
1969 2373 5.350633 TCCTCATTTTTGAAGCAACAGTTG 58.649 37.500 9.12 9.12 0.00 3.16
1970 2374 5.105392 TCCTCATTTTTGAAGCAACAGTTGT 60.105 36.000 14.88 0.00 0.00 3.32
1971 2375 5.232838 CCTCATTTTTGAAGCAACAGTTGTC 59.767 40.000 14.88 6.10 0.00 3.18
1972 2376 5.964758 TCATTTTTGAAGCAACAGTTGTCT 58.035 33.333 14.88 9.39 0.00 3.41
1973 2377 6.397272 TCATTTTTGAAGCAACAGTTGTCTT 58.603 32.000 14.88 16.49 32.43 3.01
1974 2378 6.873076 TCATTTTTGAAGCAACAGTTGTCTTT 59.127 30.769 14.88 7.24 30.80 2.52
1975 2379 7.387397 TCATTTTTGAAGCAACAGTTGTCTTTT 59.613 29.630 14.88 4.95 30.80 2.27
1976 2380 6.704512 TTTTGAAGCAACAGTTGTCTTTTC 57.295 33.333 14.88 12.91 30.80 2.29
1977 2381 5.384063 TTGAAGCAACAGTTGTCTTTTCA 57.616 34.783 14.88 14.91 30.80 2.69
1978 2382 4.985413 TGAAGCAACAGTTGTCTTTTCAG 58.015 39.130 14.88 0.00 30.80 3.02
1979 2383 4.699735 TGAAGCAACAGTTGTCTTTTCAGA 59.300 37.500 14.88 0.00 30.80 3.27
1980 2384 5.357878 TGAAGCAACAGTTGTCTTTTCAGAT 59.642 36.000 14.88 0.00 30.80 2.90
1981 2385 5.841957 AGCAACAGTTGTCTTTTCAGATT 57.158 34.783 14.88 0.00 0.00 2.40
1982 2386 6.212888 AGCAACAGTTGTCTTTTCAGATTT 57.787 33.333 14.88 0.00 0.00 2.17
1983 2387 6.038356 AGCAACAGTTGTCTTTTCAGATTTG 58.962 36.000 14.88 0.00 0.00 2.32
1984 2388 6.035843 GCAACAGTTGTCTTTTCAGATTTGA 58.964 36.000 14.88 0.00 0.00 2.69
1985 2389 6.531240 GCAACAGTTGTCTTTTCAGATTTGAA 59.469 34.615 14.88 0.00 41.44 2.69
2025 2429 8.352201 GCTGATGTTTGATATGCCTAATGTTTA 58.648 33.333 0.00 0.00 0.00 2.01
2035 2439 6.736110 ATGCCTAATGTTTAATGCTGGATT 57.264 33.333 0.00 0.00 0.00 3.01
2080 2484 8.695456 CAAAATCTAATGGGTAATACAGCCTTT 58.305 33.333 0.00 0.00 45.71 3.11
2103 2507 3.452627 GACCTTGGAAGAGCTAATCTGGA 59.547 47.826 0.00 0.00 38.67 3.86
2217 2621 7.540400 TGTTTTATTAATGATGTTCTGTTGCCG 59.460 33.333 0.00 0.00 0.00 5.69
2218 2622 6.993786 TTATTAATGATGTTCTGTTGCCGA 57.006 33.333 0.00 0.00 0.00 5.54
2231 2637 0.736053 TTGCCGAGTTTGTTGGTGTC 59.264 50.000 0.00 0.00 31.00 3.67
2313 2719 5.350504 AGATGGACAACCTACAGAGAATG 57.649 43.478 0.00 0.00 37.04 2.67
2434 2840 4.594970 TCCTGTCCTTTGTTCACTGAAAA 58.405 39.130 0.00 0.00 0.00 2.29
2445 2851 1.806542 TCACTGAAAATTGGAGCGAGC 59.193 47.619 0.00 0.00 0.00 5.03
2480 2886 8.852135 CCCATTTGGTAACTTCTTTAGTTTGTA 58.148 33.333 0.00 0.00 44.73 2.41
2502 2908 4.720649 TCTATCCTCCACGAGTGAAAAG 57.279 45.455 4.59 0.00 0.00 2.27
2581 3029 2.159448 TGGTGTTTCACTTGCTTGAACG 60.159 45.455 0.06 0.00 35.18 3.95
2589 3037 7.438757 TGTTTCACTTGCTTGAACGTATAAGTA 59.561 33.333 11.80 6.12 35.18 2.24
2765 3213 5.664294 TTATTCGCCAGAACTTAGGTGTA 57.336 39.130 0.00 0.00 39.48 2.90
2767 3215 2.799017 TCGCCAGAACTTAGGTGTAGA 58.201 47.619 0.00 0.00 36.77 2.59
2768 3216 3.362706 TCGCCAGAACTTAGGTGTAGAT 58.637 45.455 0.00 0.00 36.77 1.98
2770 3218 4.579340 TCGCCAGAACTTAGGTGTAGATAG 59.421 45.833 0.00 0.00 36.77 2.08
2771 3219 4.579340 CGCCAGAACTTAGGTGTAGATAGA 59.421 45.833 0.00 0.00 0.00 1.98
2773 3221 6.568844 CGCCAGAACTTAGGTGTAGATAGATC 60.569 46.154 0.00 0.00 0.00 2.75
2774 3222 6.294843 GCCAGAACTTAGGTGTAGATAGATCC 60.295 46.154 0.00 0.00 0.00 3.36
2775 3223 6.778069 CCAGAACTTAGGTGTAGATAGATCCA 59.222 42.308 0.00 0.00 0.00 3.41
2777 3225 6.492087 AGAACTTAGGTGTAGATAGATCCAGC 59.508 42.308 0.00 0.00 0.00 4.85
2778 3226 5.081032 ACTTAGGTGTAGATAGATCCAGCC 58.919 45.833 0.00 0.00 0.00 4.85
2779 3227 3.913370 AGGTGTAGATAGATCCAGCCT 57.087 47.619 0.00 0.00 0.00 4.58
2780 3228 4.206244 AGGTGTAGATAGATCCAGCCTT 57.794 45.455 0.00 0.00 0.00 4.35
2782 3230 3.259625 GGTGTAGATAGATCCAGCCTTCC 59.740 52.174 0.00 0.00 0.00 3.46
2783 3231 4.156477 GTGTAGATAGATCCAGCCTTCCT 58.844 47.826 0.00 0.00 0.00 3.36
2785 3233 4.835615 TGTAGATAGATCCAGCCTTCCTTC 59.164 45.833 0.00 0.00 0.00 3.46
2786 3234 4.212070 AGATAGATCCAGCCTTCCTTCT 57.788 45.455 0.00 0.00 0.00 2.85
2787 3235 4.565817 AGATAGATCCAGCCTTCCTTCTT 58.434 43.478 0.00 0.00 0.00 2.52
2788 3236 4.592778 AGATAGATCCAGCCTTCCTTCTTC 59.407 45.833 0.00 0.00 0.00 2.87
2907 3365 7.862372 GTGATAACACTCTTTTTGCTTCATGAA 59.138 33.333 8.12 8.12 42.99 2.57
2960 3418 3.490439 AAACCCATGCTTTCCTTTTGG 57.510 42.857 0.00 0.00 42.21 3.28
3025 3483 1.393883 GAAAAGCACGTCGGGATTCTC 59.606 52.381 0.00 0.00 0.00 2.87
3077 3535 5.450550 GCTGAAAGAGCCAAACTTAGTTGTT 60.451 40.000 0.00 0.00 42.54 2.83
3126 3584 1.858091 CCATAAGCGGCTCTGTACTG 58.142 55.000 1.45 0.00 0.00 2.74
3161 3619 4.993705 TTCCTAAACCCTGTGATGTCTT 57.006 40.909 0.00 0.00 0.00 3.01
3183 3641 7.814587 GTCTTGCCTTAGTTAATTTGATTTGCT 59.185 33.333 0.00 0.00 0.00 3.91
3288 3746 6.519382 TGTACATTGAGGAGCTGATATTCTG 58.481 40.000 0.00 0.00 0.00 3.02
3453 3911 1.812235 TCATGTCATGTGCACCTGAC 58.188 50.000 34.84 34.84 40.44 3.51
3681 4354 6.035070 ACATTGTTTTGAAAGCAAACGATG 57.965 33.333 18.46 18.46 43.27 3.84
3694 4367 2.674852 CAAACGATGTCAGATCCAGGTG 59.325 50.000 0.00 0.00 0.00 4.00
3831 4504 1.104630 CGAACTCTCCTCCCCACTAC 58.895 60.000 0.00 0.00 0.00 2.73
3851 4524 4.408182 ACGATCTCCCAGTGGAAAATAG 57.592 45.455 11.95 3.67 41.17 1.73
3908 4581 0.537371 AAACCGGTTGCTTCTCAGGG 60.537 55.000 23.08 0.00 0.00 4.45
3915 4588 1.758440 TTGCTTCTCAGGGCGTGACT 61.758 55.000 5.66 0.00 0.00 3.41
3916 4589 1.739562 GCTTCTCAGGGCGTGACTG 60.740 63.158 5.66 0.00 37.30 3.51
3917 4590 1.668294 CTTCTCAGGGCGTGACTGT 59.332 57.895 5.66 0.00 37.25 3.55
3918 4591 0.389166 CTTCTCAGGGCGTGACTGTC 60.389 60.000 5.66 0.00 37.25 3.51
3919 4592 1.112916 TTCTCAGGGCGTGACTGTCA 61.113 55.000 6.36 6.36 37.25 3.58
3920 4593 0.900182 TCTCAGGGCGTGACTGTCAT 60.900 55.000 14.37 0.00 37.25 3.06
3921 4594 0.817654 CTCAGGGCGTGACTGTCATA 59.182 55.000 14.37 0.00 37.25 2.15
3922 4595 1.410517 CTCAGGGCGTGACTGTCATAT 59.589 52.381 14.37 0.00 37.25 1.78
3923 4596 1.409064 TCAGGGCGTGACTGTCATATC 59.591 52.381 14.37 6.12 37.25 1.63
3924 4597 0.753262 AGGGCGTGACTGTCATATCC 59.247 55.000 14.37 14.33 0.00 2.59
3925 4598 0.597637 GGGCGTGACTGTCATATCCG 60.598 60.000 14.37 13.26 0.00 4.18
3926 4599 0.102481 GGCGTGACTGTCATATCCGT 59.898 55.000 14.37 0.00 0.00 4.69
3927 4600 1.470979 GGCGTGACTGTCATATCCGTT 60.471 52.381 14.37 0.00 0.00 4.44
3928 4601 1.852895 GCGTGACTGTCATATCCGTTC 59.147 52.381 14.37 0.00 0.00 3.95
3929 4602 2.460918 CGTGACTGTCATATCCGTTCC 58.539 52.381 14.37 0.00 0.00 3.62
3930 4603 2.159296 CGTGACTGTCATATCCGTTCCA 60.159 50.000 14.37 0.00 0.00 3.53
3931 4604 3.490933 CGTGACTGTCATATCCGTTCCAT 60.491 47.826 14.37 0.00 0.00 3.41
3932 4605 4.442706 GTGACTGTCATATCCGTTCCATT 58.557 43.478 14.37 0.00 0.00 3.16
3933 4606 4.508124 GTGACTGTCATATCCGTTCCATTC 59.492 45.833 14.37 0.00 0.00 2.67
3934 4607 4.161377 TGACTGTCATATCCGTTCCATTCA 59.839 41.667 6.36 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.844348 ACAACTAGGGAATCGTGGGATT 59.156 45.455 0.00 0.00 45.43 3.01
21 22 1.134670 GCGCTCTCACAACTAGGGAAT 60.135 52.381 0.00 0.00 0.00 3.01
51 52 0.980754 TCATCTACCACCATGGCCGT 60.981 55.000 13.04 10.73 42.67 5.68
55 56 2.483714 CGGAAGTCATCTACCACCATGG 60.484 54.545 11.19 11.19 45.02 3.66
57 58 1.139058 GCGGAAGTCATCTACCACCAT 59.861 52.381 0.00 0.00 0.00 3.55
64 65 0.395311 ACCTCCGCGGAAGTCATCTA 60.395 55.000 30.53 2.79 36.31 1.98
68 69 1.982395 ATGACCTCCGCGGAAGTCA 60.982 57.895 44.78 44.78 45.83 3.41
70 71 1.827399 AACATGACCTCCGCGGAAGT 61.827 55.000 28.88 28.88 36.31 3.01
75 76 2.434884 AGCAACATGACCTCCGCG 60.435 61.111 0.00 0.00 0.00 6.46
80 81 1.002888 CAGAGTCCAGCAACATGACCT 59.997 52.381 0.00 0.00 0.00 3.85
134 135 1.134818 CACATCAAATCCCCGAGTCGA 60.135 52.381 15.64 0.00 0.00 4.20
135 136 1.290203 CACATCAAATCCCCGAGTCG 58.710 55.000 5.29 5.29 0.00 4.18
154 156 4.080863 AGGACAACACTAAGATGATGACCC 60.081 45.833 2.04 0.00 37.73 4.46
157 159 5.026121 AGGAGGACAACACTAAGATGATGA 58.974 41.667 0.00 0.00 0.00 2.92
164 166 6.095160 ACGTTATAGAGGAGGACAACACTAAG 59.905 42.308 0.00 0.00 0.00 2.18
166 168 5.503927 ACGTTATAGAGGAGGACAACACTA 58.496 41.667 0.00 0.00 0.00 2.74
172 174 3.698040 GGACAACGTTATAGAGGAGGACA 59.302 47.826 0.00 0.00 0.00 4.02
173 175 3.952967 AGGACAACGTTATAGAGGAGGAC 59.047 47.826 0.00 0.00 0.00 3.85
184 186 0.971386 GGAGGTGGAGGACAACGTTA 59.029 55.000 0.00 0.00 43.31 3.18
186 188 0.836400 ATGGAGGTGGAGGACAACGT 60.836 55.000 0.00 0.00 43.31 3.99
188 190 0.035056 CCATGGAGGTGGAGGACAAC 60.035 60.000 5.56 0.00 42.02 3.32
190 192 2.300967 GCCATGGAGGTGGAGGACA 61.301 63.158 18.40 0.00 42.02 4.02
223 225 1.893919 GACTGCCTTCGAAGCCCTCT 61.894 60.000 19.99 0.09 0.00 3.69
232 234 1.392710 ATAGGGGACGACTGCCTTCG 61.393 60.000 2.69 2.69 44.87 3.79
239 241 3.393426 TGGAACTAATAGGGGACGACT 57.607 47.619 0.00 0.00 0.00 4.18
243 245 4.223255 GGAGCTATGGAACTAATAGGGGAC 59.777 50.000 0.00 0.00 0.00 4.46
246 248 4.020128 GGTGGAGCTATGGAACTAATAGGG 60.020 50.000 0.00 0.00 0.00 3.53
250 252 4.298626 TGAGGTGGAGCTATGGAACTAAT 58.701 43.478 0.00 0.00 0.00 1.73
251 253 3.706594 CTGAGGTGGAGCTATGGAACTAA 59.293 47.826 0.00 0.00 0.00 2.24
253 255 2.114616 CTGAGGTGGAGCTATGGAACT 58.885 52.381 0.00 0.00 0.00 3.01
257 259 1.134280 CCAACTGAGGTGGAGCTATGG 60.134 57.143 12.15 0.00 0.00 2.74
273 277 2.741211 GCTCCGTCGGGTTCCAAC 60.741 66.667 12.29 0.00 33.83 3.77
282 286 1.593006 GTAATTGTCATGGCTCCGTCG 59.407 52.381 0.00 0.00 0.00 5.12
284 288 1.559682 AGGTAATTGTCATGGCTCCGT 59.440 47.619 0.00 0.00 0.00 4.69
287 291 3.565902 GCCTTAGGTAATTGTCATGGCTC 59.434 47.826 0.00 0.00 35.44 4.70
288 292 3.203040 AGCCTTAGGTAATTGTCATGGCT 59.797 43.478 0.00 0.00 42.69 4.75
301 306 2.420129 CGCAATCCACTTAGCCTTAGGT 60.420 50.000 0.00 0.00 0.00 3.08
308 313 1.766143 CGCCTCGCAATCCACTTAGC 61.766 60.000 0.00 0.00 0.00 3.09
314 319 2.994387 CTATGCCGCCTCGCAATCCA 62.994 60.000 0.00 0.00 43.24 3.41
319 324 4.529219 CCACTATGCCGCCTCGCA 62.529 66.667 0.00 0.00 44.35 5.10
326 331 4.155733 TCCACCGCCACTATGCCG 62.156 66.667 0.00 0.00 0.00 5.69
328 333 2.890474 CGTCCACCGCCACTATGC 60.890 66.667 0.00 0.00 0.00 3.14
332 337 4.003788 CTTCCGTCCACCGCCACT 62.004 66.667 0.00 0.00 34.38 4.00
337 342 3.382832 AGCTCCTTCCGTCCACCG 61.383 66.667 0.00 0.00 0.00 4.94
339 344 2.232298 CTCCAGCTCCTTCCGTCCAC 62.232 65.000 0.00 0.00 0.00 4.02
341 346 1.045911 ATCTCCAGCTCCTTCCGTCC 61.046 60.000 0.00 0.00 0.00 4.79
344 349 0.179089 CACATCTCCAGCTCCTTCCG 60.179 60.000 0.00 0.00 0.00 4.30
346 351 1.470632 CGTCACATCTCCAGCTCCTTC 60.471 57.143 0.00 0.00 0.00 3.46
350 355 0.814457 ACTCGTCACATCTCCAGCTC 59.186 55.000 0.00 0.00 0.00 4.09
353 358 1.815613 AGACACTCGTCACATCTCCAG 59.184 52.381 0.00 0.00 45.23 3.86
354 359 1.813178 GAGACACTCGTCACATCTCCA 59.187 52.381 0.00 0.00 45.23 3.86
365 370 1.262950 CGAGGCATCTAGAGACACTCG 59.737 57.143 18.19 18.19 37.99 4.18
385 390 2.219216 TCGTATATAAAACGCTTGCCGC 59.781 45.455 6.20 0.00 41.76 6.53
388 393 7.477422 CACCATTATCGTATATAAAACGCTTGC 59.523 37.037 6.20 0.00 40.12 4.01
390 395 8.492748 CACACCATTATCGTATATAAAACGCTT 58.507 33.333 6.20 0.84 40.12 4.68
403 408 1.078778 TGCCGCACACCATTATCGT 60.079 52.632 0.00 0.00 0.00 3.73
407 412 2.045438 CCCTGCCGCACACCATTA 60.045 61.111 0.00 0.00 0.00 1.90
432 437 1.003580 AGAGAGAATTTTCGCTGCCCA 59.996 47.619 1.33 0.00 37.46 5.36
438 443 5.854431 AGTTTCTCAGAGAGAATTTTCGC 57.146 39.130 9.98 0.00 46.20 4.70
442 447 6.350612 CCGGAGTAGTTTCTCAGAGAGAATTT 60.351 42.308 9.98 4.96 46.20 1.82
445 450 4.011023 CCGGAGTAGTTTCTCAGAGAGAA 58.989 47.826 0.00 5.41 45.45 2.87
462 467 1.202177 CCATTTTTCATGTCGCCGGAG 60.202 52.381 5.05 0.00 0.00 4.63
465 470 2.453080 CATCCATTTTTCATGTCGCCG 58.547 47.619 0.00 0.00 0.00 6.46
468 473 3.507103 TGCCATCCATTTTTCATGTCG 57.493 42.857 0.00 0.00 0.00 4.35
473 478 2.911636 ACCCATTGCCATCCATTTTTCA 59.088 40.909 0.00 0.00 0.00 2.69
487 492 1.200519 TACCCCTTCTCGACCCATTG 58.799 55.000 0.00 0.00 0.00 2.82
522 527 2.495939 GCATACGCGTTTTCAACTGAG 58.504 47.619 20.78 0.00 0.00 3.35
535 540 2.259505 GAGTATACTCCCGCATACGC 57.740 55.000 20.40 0.00 37.02 4.42
545 550 4.689612 TTCCTGCCAATGGAGTATACTC 57.310 45.455 22.47 22.47 42.14 2.59
567 574 6.441088 AGTGTACTTTCAAATCCTTCCTCT 57.559 37.500 0.00 0.00 0.00 3.69
568 575 5.644206 GGAGTGTACTTTCAAATCCTTCCTC 59.356 44.000 0.00 0.00 0.00 3.71
569 576 5.515008 GGGAGTGTACTTTCAAATCCTTCCT 60.515 44.000 0.00 0.00 0.00 3.36
571 578 4.392138 CGGGAGTGTACTTTCAAATCCTTC 59.608 45.833 0.00 0.00 0.00 3.46
573 580 3.868754 GCGGGAGTGTACTTTCAAATCCT 60.869 47.826 0.00 0.00 0.00 3.24
575 582 2.418976 GGCGGGAGTGTACTTTCAAATC 59.581 50.000 0.00 0.00 0.00 2.17
576 583 2.224670 TGGCGGGAGTGTACTTTCAAAT 60.225 45.455 0.00 0.00 0.00 2.32
580 587 1.012486 CGTGGCGGGAGTGTACTTTC 61.012 60.000 0.00 0.00 0.00 2.62
593 600 0.940519 TAAACTCAACCGACGTGGCG 60.941 55.000 0.00 0.00 43.94 5.69
595 602 2.288030 ACTCTAAACTCAACCGACGTGG 60.288 50.000 0.00 0.00 46.41 4.94
637 669 5.869649 AGGTTAAGGTGCTGTTCATTTTT 57.130 34.783 0.00 0.00 0.00 1.94
649 681 6.825721 AGAGCTCATATTTGAAGGTTAAGGTG 59.174 38.462 17.77 0.00 0.00 4.00
654 686 7.665559 ACAAACAGAGCTCATATTTGAAGGTTA 59.334 33.333 29.21 0.00 34.93 2.85
656 688 6.006449 ACAAACAGAGCTCATATTTGAAGGT 58.994 36.000 29.21 14.10 34.93 3.50
666 698 4.158394 ACAACAACAACAAACAGAGCTCAT 59.842 37.500 17.77 0.00 0.00 2.90
667 699 3.505680 ACAACAACAACAAACAGAGCTCA 59.494 39.130 17.77 0.00 0.00 4.26
668 700 4.096732 ACAACAACAACAAACAGAGCTC 57.903 40.909 5.27 5.27 0.00 4.09
669 701 4.236935 CAACAACAACAACAAACAGAGCT 58.763 39.130 0.00 0.00 0.00 4.09
670 702 3.987220 ACAACAACAACAACAAACAGAGC 59.013 39.130 0.00 0.00 0.00 4.09
671 703 5.461737 ACAACAACAACAACAACAAACAGAG 59.538 36.000 0.00 0.00 0.00 3.35
672 704 5.352284 ACAACAACAACAACAACAAACAGA 58.648 33.333 0.00 0.00 0.00 3.41
674 706 5.351465 ACAACAACAACAACAACAACAAACA 59.649 32.000 0.00 0.00 0.00 2.83
675 707 5.801012 ACAACAACAACAACAACAACAAAC 58.199 33.333 0.00 0.00 0.00 2.93
676 708 6.128282 ACAACAACAACAACAACAACAACAAA 60.128 30.769 0.00 0.00 0.00 2.83
677 709 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
678 710 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
679 711 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
680 712 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
681 713 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
682 714 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
683 715 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
684 716 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
685 717 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
686 718 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
687 719 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
688 720 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
689 721 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
690 722 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
691 723 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
692 724 6.422776 AAACAACAACAACAACAACAACAA 57.577 29.167 0.00 0.00 0.00 2.83
693 725 6.422776 AAAACAACAACAACAACAACAACA 57.577 29.167 0.00 0.00 0.00 3.33
720 752 1.183549 TCTTTAGTCGCCCCTGTCTC 58.816 55.000 0.00 0.00 0.00 3.36
727 759 6.148976 ACAACTTTAAGAATCTTTAGTCGCCC 59.851 38.462 0.00 0.00 0.00 6.13
736 768 7.286775 TGGGCTTACAACAACTTTAAGAATCTT 59.713 33.333 0.00 0.00 0.00 2.40
738 770 6.977213 TGGGCTTACAACAACTTTAAGAATC 58.023 36.000 0.00 0.00 0.00 2.52
740 772 6.775629 AGATGGGCTTACAACAACTTTAAGAA 59.224 34.615 0.00 0.00 0.00 2.52
742 778 6.206634 TCAGATGGGCTTACAACAACTTTAAG 59.793 38.462 0.00 0.00 0.00 1.85
745 781 4.469657 TCAGATGGGCTTACAACAACTTT 58.530 39.130 0.00 0.00 0.00 2.66
759 795 5.762825 CATGTGATTTTACCTCAGATGGG 57.237 43.478 3.29 0.00 39.48 4.00
787 823 1.508632 CACACACACGGACCCTTTAG 58.491 55.000 0.00 0.00 0.00 1.85
816 852 2.261729 GGAGACAGGAAGGAAGAAGGT 58.738 52.381 0.00 0.00 0.00 3.50
817 853 2.260822 TGGAGACAGGAAGGAAGAAGG 58.739 52.381 0.00 0.00 35.01 3.46
818 854 4.357918 TTTGGAGACAGGAAGGAAGAAG 57.642 45.455 0.00 0.00 44.54 2.85
819 855 4.788925 TTTTGGAGACAGGAAGGAAGAA 57.211 40.909 0.00 0.00 44.54 2.52
820 856 4.080015 TGTTTTTGGAGACAGGAAGGAAGA 60.080 41.667 0.00 0.00 44.54 2.87
821 857 4.207165 TGTTTTTGGAGACAGGAAGGAAG 58.793 43.478 0.00 0.00 44.54 3.46
822 858 4.243793 TGTTTTTGGAGACAGGAAGGAA 57.756 40.909 0.00 0.00 44.54 3.36
823 859 3.943671 TGTTTTTGGAGACAGGAAGGA 57.056 42.857 0.00 0.00 44.54 3.36
824 860 5.337578 TTTTGTTTTTGGAGACAGGAAGG 57.662 39.130 0.00 0.00 44.54 3.46
825 861 6.162777 TGTTTTTGTTTTTGGAGACAGGAAG 58.837 36.000 0.00 0.00 44.54 3.46
826 862 6.102897 TGTTTTTGTTTTTGGAGACAGGAA 57.897 33.333 0.00 0.00 44.54 3.36
827 863 5.730296 TGTTTTTGTTTTTGGAGACAGGA 57.270 34.783 0.00 0.00 44.54 3.86
828 864 6.793492 TTTGTTTTTGTTTTTGGAGACAGG 57.207 33.333 0.00 0.00 44.54 4.00
851 887 4.277672 GCCGTTAGAAGGAAGAAGGTTTTT 59.722 41.667 0.00 0.00 0.00 1.94
852 888 3.819337 GCCGTTAGAAGGAAGAAGGTTTT 59.181 43.478 0.00 0.00 0.00 2.43
853 889 3.409570 GCCGTTAGAAGGAAGAAGGTTT 58.590 45.455 0.00 0.00 0.00 3.27
854 890 2.290134 GGCCGTTAGAAGGAAGAAGGTT 60.290 50.000 0.00 0.00 0.00 3.50
1234 1270 0.881118 AATCCGCGAACACTGCAAAT 59.119 45.000 8.23 0.00 0.00 2.32
1383 1419 4.703093 TGATCATTGTATATACCTCGCCGA 59.297 41.667 10.38 0.00 0.00 5.54
1395 1431 6.071165 TGACATCCGCTCTATGATCATTGTAT 60.071 38.462 14.65 0.00 0.00 2.29
1396 1432 5.243730 TGACATCCGCTCTATGATCATTGTA 59.756 40.000 14.65 0.00 0.00 2.41
1424 1461 6.432936 CAAAGCATGCTGTATGTACCATAAG 58.567 40.000 23.48 0.00 39.08 1.73
1466 1503 3.611986 CACACACAACACAATGAACCAAC 59.388 43.478 0.00 0.00 0.00 3.77
1685 1722 3.705051 TCCCTATCCGACAGTTACAACT 58.295 45.455 0.00 0.00 40.60 3.16
1706 1743 5.221702 ACCAGCAAAACAAAAGGATTAGCAT 60.222 36.000 0.00 0.00 0.00 3.79
1724 1761 1.699083 TCCACTCTTCAATGACCAGCA 59.301 47.619 0.00 0.00 0.00 4.41
1725 1762 2.479566 TCCACTCTTCAATGACCAGC 57.520 50.000 0.00 0.00 0.00 4.85
1728 1765 6.599244 TGTAATTCATCCACTCTTCAATGACC 59.401 38.462 0.00 0.00 0.00 4.02
1759 1796 6.913673 CCCCATGTTTCGTTATTTTTATACCG 59.086 38.462 0.00 0.00 0.00 4.02
1763 1800 6.211785 ACACCCCCATGTTTCGTTATTTTTAT 59.788 34.615 0.00 0.00 0.00 1.40
1764 1801 5.539193 ACACCCCCATGTTTCGTTATTTTTA 59.461 36.000 0.00 0.00 0.00 1.52
1765 1802 4.345547 ACACCCCCATGTTTCGTTATTTTT 59.654 37.500 0.00 0.00 0.00 1.94
1775 1812 2.408203 ACCCCACACCCCCATGTTT 61.408 57.895 0.00 0.00 0.00 2.83
1788 1825 2.124085 CCTGTCCTACCCACCCCA 59.876 66.667 0.00 0.00 0.00 4.96
1792 1829 0.688087 CTCTCCCCTGTCCTACCCAC 60.688 65.000 0.00 0.00 0.00 4.61
1794 1831 0.105913 CTCTCTCCCCTGTCCTACCC 60.106 65.000 0.00 0.00 0.00 3.69
1795 1832 0.632294 ACTCTCTCCCCTGTCCTACC 59.368 60.000 0.00 0.00 0.00 3.18
1796 1833 3.887916 ATACTCTCTCCCCTGTCCTAC 57.112 52.381 0.00 0.00 0.00 3.18
1797 1834 5.675421 TCTTAATACTCTCTCCCCTGTCCTA 59.325 44.000 0.00 0.00 0.00 2.94
1798 1835 4.482772 TCTTAATACTCTCTCCCCTGTCCT 59.517 45.833 0.00 0.00 0.00 3.85
1800 1837 6.987403 ATTCTTAATACTCTCTCCCCTGTC 57.013 41.667 0.00 0.00 0.00 3.51
1801 1838 8.855804 TTAATTCTTAATACTCTCTCCCCTGT 57.144 34.615 0.00 0.00 0.00 4.00
1953 2357 6.219473 TGAAAAGACAACTGTTGCTTCAAAA 58.781 32.000 19.82 8.53 0.00 2.44
1960 2364 6.035843 TCAAATCTGAAAAGACAACTGTTGC 58.964 36.000 19.82 12.59 0.00 4.17
1961 2365 7.253883 GCTTCAAATCTGAAAAGACAACTGTTG 60.254 37.037 18.44 18.44 41.05 3.33
1962 2366 6.753744 GCTTCAAATCTGAAAAGACAACTGTT 59.246 34.615 0.00 0.00 41.05 3.16
1963 2367 6.127647 TGCTTCAAATCTGAAAAGACAACTGT 60.128 34.615 0.00 0.00 41.05 3.55
1964 2368 6.267817 TGCTTCAAATCTGAAAAGACAACTG 58.732 36.000 0.00 0.00 41.05 3.16
1965 2369 6.455360 TGCTTCAAATCTGAAAAGACAACT 57.545 33.333 0.00 0.00 41.05 3.16
1966 2370 6.531240 TGTTGCTTCAAATCTGAAAAGACAAC 59.469 34.615 8.55 8.55 41.05 3.32
1967 2371 6.629128 TGTTGCTTCAAATCTGAAAAGACAA 58.371 32.000 0.00 0.00 41.05 3.18
1968 2372 6.127647 ACTGTTGCTTCAAATCTGAAAAGACA 60.128 34.615 0.00 0.00 41.05 3.41
1969 2373 6.268566 ACTGTTGCTTCAAATCTGAAAAGAC 58.731 36.000 0.00 0.00 41.05 3.01
1970 2374 6.455360 ACTGTTGCTTCAAATCTGAAAAGA 57.545 33.333 0.00 0.00 41.05 2.52
1971 2375 8.697067 CATAACTGTTGCTTCAAATCTGAAAAG 58.303 33.333 2.69 0.00 41.05 2.27
1972 2376 8.196771 ACATAACTGTTGCTTCAAATCTGAAAA 58.803 29.630 2.69 0.00 34.95 2.29
1973 2377 7.648908 CACATAACTGTTGCTTCAAATCTGAAA 59.351 33.333 2.69 0.00 35.78 2.69
1974 2378 7.140705 CACATAACTGTTGCTTCAAATCTGAA 58.859 34.615 2.69 0.00 34.57 3.02
1975 2379 6.671190 CACATAACTGTTGCTTCAAATCTGA 58.329 36.000 2.69 0.00 31.62 3.27
1976 2380 5.344128 GCACATAACTGTTGCTTCAAATCTG 59.656 40.000 2.69 0.00 31.62 2.90
1977 2381 5.242393 AGCACATAACTGTTGCTTCAAATCT 59.758 36.000 2.69 0.00 36.80 2.40
1978 2382 5.344128 CAGCACATAACTGTTGCTTCAAATC 59.656 40.000 2.69 0.00 37.53 2.17
1979 2383 5.009911 TCAGCACATAACTGTTGCTTCAAAT 59.990 36.000 2.69 0.00 37.53 2.32
1980 2384 4.337836 TCAGCACATAACTGTTGCTTCAAA 59.662 37.500 2.69 0.00 37.53 2.69
1981 2385 3.882288 TCAGCACATAACTGTTGCTTCAA 59.118 39.130 2.69 0.00 37.53 2.69
1982 2386 3.475575 TCAGCACATAACTGTTGCTTCA 58.524 40.909 2.69 0.00 37.53 3.02
1983 2387 4.083110 ACATCAGCACATAACTGTTGCTTC 60.083 41.667 2.69 0.00 38.05 3.86
1984 2388 3.822735 ACATCAGCACATAACTGTTGCTT 59.177 39.130 2.69 0.00 38.05 3.91
1985 2389 3.415212 ACATCAGCACATAACTGTTGCT 58.585 40.909 2.69 0.70 38.05 3.91
2025 2429 5.513233 AGAAAGGTGATACAATCCAGCATT 58.487 37.500 0.00 0.00 33.61 3.56
2080 2484 3.198635 CCAGATTAGCTCTTCCAAGGTCA 59.801 47.826 0.00 0.00 29.16 4.02
2103 2507 7.554959 TTCCTACTTATCTGACCACTCTTTT 57.445 36.000 0.00 0.00 0.00 2.27
2217 2621 3.422655 GAAACACGACACCAACAAACTC 58.577 45.455 0.00 0.00 0.00 3.01
2218 2622 2.162809 GGAAACACGACACCAACAAACT 59.837 45.455 0.00 0.00 0.00 2.66
2231 2637 4.725556 TCTGATTTTCGAAGGAAACACG 57.274 40.909 0.00 0.00 41.66 4.49
2313 2719 6.090358 TGCGCTTACAGATTTTCTACAACTAC 59.910 38.462 9.73 0.00 0.00 2.73
2422 2828 3.210227 TCGCTCCAATTTTCAGTGAACA 58.790 40.909 4.68 0.00 0.00 3.18
2434 2840 0.883833 CCAAACTTGCTCGCTCCAAT 59.116 50.000 0.00 0.00 0.00 3.16
2445 2851 3.070878 AGTTACCAAATGGGCCAAACTTG 59.929 43.478 11.89 14.44 42.05 3.16
2480 2886 4.100189 CCTTTTCACTCGTGGAGGATAGAT 59.900 45.833 8.40 0.00 33.35 1.98
2486 2892 1.070134 TCACCTTTTCACTCGTGGAGG 59.930 52.381 11.04 11.04 33.35 4.30
2559 3007 3.489059 CGTTCAAGCAAGTGAAACACCAT 60.489 43.478 0.00 0.00 41.43 3.55
2589 3037 4.268359 GAGCAATCAGGATTTGGAGTTCT 58.732 43.478 0.00 0.00 0.00 3.01
2670 3118 6.951198 TGTGGATTATGTTAGGAACCAAACAT 59.049 34.615 6.03 6.03 44.23 2.71
2765 3213 4.212070 AGAAGGAAGGCTGGATCTATCT 57.788 45.455 0.00 0.00 0.00 1.98
2767 3215 4.565817 AGAAGAAGGAAGGCTGGATCTAT 58.434 43.478 0.00 0.00 0.00 1.98
2768 3216 3.964031 GAGAAGAAGGAAGGCTGGATCTA 59.036 47.826 0.00 0.00 0.00 1.98
2770 3218 2.771372 AGAGAAGAAGGAAGGCTGGATC 59.229 50.000 0.00 0.00 0.00 3.36
2771 3219 2.844369 AGAGAAGAAGGAAGGCTGGAT 58.156 47.619 0.00 0.00 0.00 3.41
2773 3221 2.571202 AGAAGAGAAGAAGGAAGGCTGG 59.429 50.000 0.00 0.00 0.00 4.85
2774 3222 3.369366 GGAGAAGAGAAGAAGGAAGGCTG 60.369 52.174 0.00 0.00 0.00 4.85
2775 3223 2.837591 GGAGAAGAGAAGAAGGAAGGCT 59.162 50.000 0.00 0.00 0.00 4.58
2777 3225 4.352893 AGAGGAGAAGAGAAGAAGGAAGG 58.647 47.826 0.00 0.00 0.00 3.46
2778 3226 6.165577 CAAAGAGGAGAAGAGAAGAAGGAAG 58.834 44.000 0.00 0.00 0.00 3.46
2779 3227 5.604650 ACAAAGAGGAGAAGAGAAGAAGGAA 59.395 40.000 0.00 0.00 0.00 3.36
2780 3228 5.151454 ACAAAGAGGAGAAGAGAAGAAGGA 58.849 41.667 0.00 0.00 0.00 3.36
2782 3230 7.461182 TCTACAAAGAGGAGAAGAGAAGAAG 57.539 40.000 0.00 0.00 0.00 2.85
2783 3231 9.184523 CTATCTACAAAGAGGAGAAGAGAAGAA 57.815 37.037 0.00 0.00 34.49 2.52
2785 3233 8.746052 TCTATCTACAAAGAGGAGAAGAGAAG 57.254 38.462 0.00 0.00 34.49 2.85
2786 3234 9.349713 GATCTATCTACAAAGAGGAGAAGAGAA 57.650 37.037 0.00 0.00 33.57 2.87
2787 3235 7.942341 GGATCTATCTACAAAGAGGAGAAGAGA 59.058 40.741 0.00 0.00 33.57 3.10
2788 3236 7.723616 TGGATCTATCTACAAAGAGGAGAAGAG 59.276 40.741 0.00 0.00 33.57 2.85
2907 3365 2.580783 AGCCCCACAACACCTACATATT 59.419 45.455 0.00 0.00 0.00 1.28
3025 3483 1.734047 GCAGTCTCGCTGTCTAGGTTG 60.734 57.143 0.00 0.00 46.64 3.77
3077 3535 2.124060 TTTCGCAGCCAGGTTTGCA 61.124 52.632 15.69 0.00 40.28 4.08
3126 3584 6.439375 AGGGTTTAGGAAAATGTTTATCCCAC 59.561 38.462 0.00 0.00 33.55 4.61
3161 3619 9.585099 CATAAGCAAATCAAATTAACTAAGGCA 57.415 29.630 0.00 0.00 0.00 4.75
3183 3641 4.156556 GGATGCTTTGAACTGTCTGCATAA 59.843 41.667 0.00 0.00 36.65 1.90
3232 3690 5.885912 TCAATAAACTGACCAATAGGAAGGC 59.114 40.000 0.00 0.00 38.69 4.35
3288 3746 7.807977 TCTCCTGTAATTTTATTCAGATGCC 57.192 36.000 0.00 0.00 0.00 4.40
3453 3911 1.606313 AAGGCAATTGACGTGGGGG 60.606 57.895 10.34 0.00 0.00 5.40
3526 4034 7.087639 TCAAAACTTAAAAATGCCCTCATACG 58.912 34.615 0.00 0.00 31.46 3.06
3654 4327 5.727592 CGTTTGCTTTCAAAACAATGTCAAC 59.272 36.000 0.00 0.00 43.12 3.18
3681 4354 2.167487 GGAGTCTTCACCTGGATCTGAC 59.833 54.545 0.00 3.77 0.00 3.51
3694 4367 3.764237 TGTTAAGTGGTGGGAGTCTTC 57.236 47.619 0.00 0.00 0.00 2.87
3831 4504 4.672587 TCTATTTTCCACTGGGAGATCG 57.327 45.455 0.00 0.00 46.01 3.69
3851 4524 5.920840 GGTTTTGAGGCTGTATTGTTTCTTC 59.079 40.000 0.00 0.00 0.00 2.87
3908 4581 1.852895 GAACGGATATGACAGTCACGC 59.147 52.381 5.05 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.